mRNA_H-elongata_contig77629.15446.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig77629.15446.1
Unique NamemRNA_H-elongata_contig77629.15446.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig77629.15446.1 vs. uniprot
Match: D8LPR2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPR2_ECTSI)

HSP 1 Score: 537 bits (1383), Expect = 1.340e-189
Identity = 253/285 (88.77%), Postives = 274/285 (96.14%), Query Frame = 1
Query:    4 EGLLRQKNQLDAYVAWHRRQGLAPSLNELMNLPSTNERWARDGKNGVLPGAPKVTVILNLFKREVLTEQLDSLFSQTTASHISEVWVCVFSAPAQDYALRVVKDSKYKNVRLVVSDYNFKFYGRFQMALTAPTDFVWLVDDDMIPGNKYLAQLMHAAGTELLGSSLLGSIGRVLPRPGRDMSLVSYRKWGSHGGMYMPDYYWDQHHAVPVDYLCSQWFLRPEWLQFMWSERPMTFETGEDFHISHTMRKYANIGTYVMPYDPNDNETKGSKYRGLSFISAATTNR 858
            EGLLRQKNQLDAYVAWHR+QGLAPSL+E+M++PSTNERWA +G+ G L GAPKVTVILNLF REVLTEQLDSLF+QTTASHI+EVWVCVFSAPAQDYALRVVK+SKYKNVRLVVSD+NFKFYGRFQMALTAPTDFVWL+DDDMIPGNKYL QLMHAAGTELLGSSLLGSIGRVLPRPGRDMSLVSYRKWGSHGGMYMPDYYWDQ  AVPVDYLCSQWFLRPEWLQ MWSERPMTFETGEDFH+SHTMRKYANIGTYVMP++ +D ETKGSK+RGLSF++AAT++R
Sbjct:  177 EGLLRQKNQLDAYVAWHRQQGLAPSLDEMMSMPSTNERWAVEGRTGGLKGAPKVTVILNLFMREVLTEQLDSLFAQTTASHIAEVWVCVFSAPAQDYALRVVKESKYKNVRLVVSDFNFKFYGRFQMALTAPTDFVWLIDDDMIPGNKYLGQLMHAAGTELLGSSLLGSIGRVLPRPGRDMSLVSYRKWGSHGGMYMPDYYWDQDSAVPVDYLCSQWFLRPEWLQHMWSERPMTFETGEDFHVSHTMRKYANIGTYVMPFNSDDEETKGSKFRGLSFVNAATSSR 461          
BLAST of mRNA_H-elongata_contig77629.15446.1 vs. uniprot
Match: A0A6H5KPH5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPH5_9PHAE)

HSP 1 Score: 537 bits (1384), Expect = 5.710e-182
Identity = 253/283 (89.40%), Postives = 274/283 (96.82%), Query Frame = 1
Query:    4 EGLLRQKNQLDAYVAWHRRQGLAPSLNELMNLPSTNERWARDGKNGVLPGAPKVTVILNLFKREVLTEQLDSLFSQTTASHISEVWVCVFSAPAQDYALRVVKDSKYKNVRLVVSDYNFKFYGRFQMALTAPTDFVWLVDDDMIPGNKYLAQLMHAAGTELLGSSLLGSIGRVLPRPGRDMSLVSYRKWGSHGGMYMPDYYWDQHHAVPVDYLCSQWFLRPEWLQFMWSERPMTFETGEDFHISHTMRKYANIGTYVMPYDPNDNETKGSKYRGLSFISAATT 852
            EGLLRQKNQLDAYVAWHR+QGLAPSL+ELM++PSTNERWA++G+ G L GAPKVTVILNLF REVLTEQLDSLF+QTTASHI+EVWVCVFSAPAQDYALRVVK+SKYKNVRLVVSD+NFKFYGRFQMALTAPTDFVWLVDDDMIPGNKYL QLMHAAGTELLGSSLLGSIGRVLPRPGRDMSLVSYRKWGSHGGMYMPDYYWDQ +AVPVDYLCSQWFLRPEWLQ MWSERPMTFETGEDFH+SHT+RKYANIGTYVMP++ +D ETKGSK+RGLSF++AAT+
Sbjct:  191 EGLLRQKNQLDAYVAWHRQQGLAPSLDELMSMPSTNERWAQEGRTGGLKGAPKVTVILNLFMREVLTEQLDSLFAQTTASHIAEVWVCVFSAPAQDYALRVVKESKYKNVRLVVSDFNFKFYGRFQMALTAPTDFVWLVDDDMIPGNKYLGQLMHAAGTELLGSSLLGSIGRVLPRPGRDMSLVSYRKWGSHGGMYMPDYYWDQDNAVPVDYLCSQWFLRPEWLQHMWSERPMTFETGEDFHVSHTLRKYANIGTYVMPFNSDDEETKGSKFRGLSFVNAATS 473          
BLAST of mRNA_H-elongata_contig77629.15446.1 vs. uniprot
Match: A0A1J3I729_NOCCA (Uncharacterized protein (Fragment) n=1 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3I729_NOCCA)

HSP 1 Score: 220 bits (560), Expect = 2.690e-66
Identity = 122/284 (42.96%), Postives = 172/284 (60.56%), Query Frame = 1
Query:   10 LLRQKNQLDAYVAWHRRQGL-APSLNELMNLPSTNERWARDGKNGVLPGAPKVTVILNLFKREVLTEQLDSLFSQTTASHISEVWVCVFSAPAQDYALRVVKDSKYKNVRLVVSDYNFKFYGRFQMALTAPTDFVWLVDDDMIPGNKYLAQLMHAAGTELLGSSLLGSIGRVLPRPGRDMSLVSYRKWGS-HGGMYMPDYYWD--QHHAVPVDYLCSQWFLRPEWLQFMWSERPMTFETGEDFHISHTMRKYANIGTYVMPYDPNDNETKGSKYRGLSFISAAT 849
            +++ K +L   V   +++ L + SL ELM + S   +WA +G     P  PKVTVILN FKR+ L  QLDSL  QT   H   VWV  F +P +    R+        +  + S+Y+FK+YGRFQ+AL    D V+++DDDMIPG K L  L H AGTE   +S+LGSIGR+LP   +D +  SYRK+ S   G+Y+PD  +D      + VD+L S WFL  E ++ ++ E+P TF TGED H+S+ ++KY N G++V+P DPND ET G     L+++S  T
Sbjct:   45 MIKMKRELYEDVLGFQKKNLGSESLEELMKMKS---KWALNG-----PTKPKVTVILNHFKRKTLCAQLDSLLHQTLPFH--HVWVLAFGSPNEASLRRIAGSYNDSRISFISSNYDFKYYGRFQIALQTEADLVYVIDDDMIPGKKMLQMLSHVAGTEKYENSVLGSIGRILPFRQKDFTFPSYRKFRSKEAGLYLPDPAYDITLDRILQVDFLSSSWFLSAELVKALFIEKPFTFATGEDLHLSYQLQKYRNAGSFVLPVDPNDKETWGDSEHRLAYVSETT 318          
BLAST of mRNA_H-elongata_contig77629.15446.1 vs. uniprot
Match: Q9FF50_ARATH (Glycosyltransferase family protein 2 n=41 Tax=Brassicaceae TaxID=3700 RepID=Q9FF50_ARATH)

HSP 1 Score: 224 bits (570), Expect = 2.340e-63
Identity = 124/286 (43.36%), Postives = 174/286 (60.84%), Query Frame = 1
Query:    4 EGLLRQKNQLDAYVAWHRRQGL-APSLNELMNLPSTNERWARDGKNGVLPGAPKVTVILNLFKREVLTEQLDSLFSQTTASHISEVWVCVFSAPAQDYALRVVKDSKYKNVRLVVSDYNFKFYGRFQMALTAPTDFVWLVDDDMIPGNKYLAQLMHAAGTELLGSSLLGSIGRVLPRPGRDMSLVSYRKWGS-HGGMYMPDYYWD--QHHAVPVDYLCSQWFLRPEWLQFMWSERPMTFETGEDFHISHTMRKYANIGTYVMPYDPNDNETKGSKYRGLSFISAAT 849
            E +++ K +L   V  ++R+ L + SL ELM + S   +WA +G     P  PKVTVILN FKR+ L  QLDSL  QT   H   VWV  F +P +    R+        +  + S+Y+FK+YGRFQ+AL    D V+++DDDMIPG K L  L H AGTE   +S+LGSIGR+LP   +D +  SYRK+ S   G+Y+PD  +D      + VD+L S WFL  E ++ ++ E+P TF TGED H+S+ ++KY N G++V+P DPND ET G     L+++S  T
Sbjct:  132 EKMIKMKRELYDDVLGYQRKNLGSESLEELMKMKS---KWALNG-----PNKPKVTVILNHFKRKTLCAQLDSLLHQTLPFH--HVWVLAFGSPNEASLRRIAGSYNDSRISFISSNYDFKYYGRFQIALQTEADLVYILDDDMIPGKKMLQMLSHVAGTEKYENSVLGSIGRILPFRQKDFTFPSYRKFRSKEAGLYLPDPAYDITLDRILQVDFLSSSWFLSAELVKALFIEKPFTFSTGEDLHLSYQLQKYRNAGSFVLPVDPNDKETWGDSEHRLAYVSETT 407          
BLAST of mRNA_H-elongata_contig77629.15446.1 vs. uniprot
Match: A0A7N0TYA9_KALFE (Uncharacterized protein n=1 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0TYA9_KALFE)

HSP 1 Score: 223 bits (567), Expect = 6.600e-63
Identity = 122/261 (46.74%), Postives = 161/261 (61.69%), Query Frame = 1
Query:   76 SLNELMNLPSTNERWARDGKNGVLPGAPKVTVILNLFKREVLTEQLDSLFSQTTASHISEVWVCVFSAPAQDYALRVVKDSKYKNVRLVVSDYNFKFYGRFQMALTAPTDFVWLVDDDMIPGNKYLAQLMHAAGTELLGSSLLGSIGRVLPRPGRDMSLVSYRKWGS-HGGMYMPDYYWD--QHHAVPVDYLCSQWFLRPEWLQFMWSERPMTFETGEDFHISHTMRKYANIGTYVMPYDPNDNETKGSKYRGLSFISAAT 849
            +L+ELM + S   RW  +G     P  PKVTVILN FKR+ L  QLDSL  QT   H   VWV  F +P  +   R+V       +  + S Y+FK+YGRFQMAL   +D V++VDDDMIPG K L  L H AGTE   +S+LGSIGR+LP   +D +  SYRK+ S   G+Y+PD  +D      V VD+L S WFL  E ++ ++ E PMTF TGED H+S+T++KY N G+YV+P D +D ET G     L+++S  T
Sbjct:  166 TLDELMRMKS---RWDLNG-----PNKPKVTVILNHFKRKTLCAQLDSLLRQTLGFH--HVWVLAFGSPNANTLSRIVSSYNDSRISFISSQYDFKYYGRFQMALQTESDLVYIVDDDMIPGTKMLQILSHVAGTEKYRNSVLGSIGRILPFRQKDFTFPSYRKFRSKEAGLYLPDPAYDIIVDKIVQVDFLSSSWFLSAELIRTLFVEAPMTFMTGEDLHLSYTLQKYRNAGSYVLPVDASDKETWGDSEHRLAYVSETT 416          
BLAST of mRNA_H-elongata_contig77629.15446.1 vs. uniprot
Match: A0A6P5H2H3_ANACO (uncharacterized protein LOC109728978 n=3 Tax=Ananas comosus TaxID=4615 RepID=A0A6P5H2H3_ANACO)

HSP 1 Score: 222 bits (565), Expect = 1.130e-62
Identity = 122/284 (42.96%), Postives = 172/284 (60.56%), Query Frame = 1
Query:   10 LLRQKNQL-DAYVAWHRRQGLAPSLNELMNLPSTNERWARDGKNGVLPGAPKVTVILNLFKREVLTEQLDSLFSQTTASHISEVWVCVFSAPAQDYALRVVKDSKYKNVRLVVSDYNFKFYGRFQMALTAPTDFVWLVDDDMIPGNKYLAQLMHAAGTELLGSSLLGSIGRVLPRPGRDMSLVSYRKWGS-HGGMYMPDYYWD--QHHAVPVDYLCSQWFLRPEWLQFMWSERPMTFETGEDFHISHTMRKYANIGTYVMPYDPNDNETKGSKYRGLSFISAAT 849
            ++R K +L D  +A+ ++     +L ELM + S   +W+  G     P  PK+TVILN +KR+ L  QLDSL  QT   H   VWV  F +P +    R+V+      +  V S Y+FK+YGRFQMAL   +DFV+++DDDMIPG + L  L H  GTE   +S+LGSIGR+LP   +D    SYRK+ S   G+Y+PD  +D      V VD+L S WFL  + ++ ++ E+P TF TGED H+S+ ++KY N G+YV+P DPND ET G     L+++S  T
Sbjct:  129 MIRLKRELYDEILAFQKKSSGTETLGELMRMKS---KWSAHG-----PSIPKITVILNHYKRKTLCAQLDSLLHQTLPFH--HVWVLSFGSPNELSLRRIVESYNNSRISFVSSTYDFKYYGRFQMALQTESDFVYILDDDMIPGKRMLEILAHVGGTEKYKNSVLGSIGRILPFRQKDFMFPSYRKFKSKEAGLYLPDPAYDITVERIVQVDFLSSSWFLPTDLVKTLFIEKPFTFATGEDLHLSYQLQKYRNAGSYVLPVDPNDRETWGDSEHRLAYVSETT 402          
BLAST of mRNA_H-elongata_contig77629.15446.1 vs. uniprot
Match: A0A8B8ZHF4_PHODC (uncharacterized protein LOC103719835 n=1 Tax=Phoenix dactylifera TaxID=42345 RepID=A0A8B8ZHF4_PHODC)

HSP 1 Score: 221 bits (564), Expect = 1.520e-62
Identity = 122/284 (42.96%), Postives = 172/284 (60.56%), Query Frame = 1
Query:   10 LLRQKNQL-DAYVAWHRRQGLAPSLNELMNLPSTNERWARDGKNGVLPGAPKVTVILNLFKREVLTEQLDSLFSQTTASHISEVWVCVFSAPAQDYALRVVKDSKYKNVRLVVSDYNFKFYGRFQMALTAPTDFVWLVDDDMIPGNKYLAQLMHAAGTELLGSSLLGSIGRVLPRPGRDMSLVSYRKWGS-HGGMYMPDYYWD--QHHAVPVDYLCSQWFLRPEWLQFMWSERPMTFETGEDFHISHTMRKYANIGTYVMPYDPNDNETKGSKYRGLSFISAAT 849
            ++R K +L D  + + ++     +L ELM + S   +W+  G     P  PK+TVILN FKR+ L  QLDSL +QT   H   VWV  F +P +    R+V+   +  +  + S Y+FK+YGRFQMAL    DFV+++DDDMIPG K L  L H  GTE   +S+LGSIGR+LP   +D +  SYRK+ S   G+Y+PD  +D      V VD+L S WFL  E ++ ++ E P TF TGED H+S+ ++KY N G++V+P DPND ET G     L+++S  T
Sbjct:  127 MIRLKRELYDEVLEFQKKNSGTETLAELMRMES---KWSPRG-----PNVPKITVILNHFKRKTLCAQLDSLLNQTLPFH--HVWVLSFGSPNELSLKRIVESYNHPRISFISSGYDFKYYGRFQMALQTEADFVYILDDDMIPGKKMLEILAHVGGTEKYKNSVLGSIGRILPFRQKDFTFPSYRKFRSKEAGLYLPDPAYDITVERIVQVDFLSSSWFLSAELVKALFIETPFTFMTGEDLHLSYQLQKYRNAGSFVLPVDPNDKETWGDSEHRLAYVSETT 400          
BLAST of mRNA_H-elongata_contig77629.15446.1 vs. uniprot
Match: A0A067LHF7_JATCU (Uncharacterized protein n=1 Tax=Jatropha curcas TaxID=180498 RepID=A0A067LHF7_JATCU)

HSP 1 Score: 221 bits (563), Expect = 2.210e-62
Identity = 121/261 (46.36%), Postives = 161/261 (61.69%), Query Frame = 1
Query:   76 SLNELMNLPSTNERWARDGKNGVLPGAPKVTVILNLFKREVLTEQLDSLFSQTTASHISEVWVCVFSAPAQDYALRVVKDSKYKNVRLVVSDYNFKFYGRFQMALTAPTDFVWLVDDDMIPGNKYLAQLMHAAGTELLGSSLLGSIGRVLPRPGRDMSLVSYRKWGS-HGGMYMPDYYWDQ--HHAVPVDYLCSQWFLRPEWLQFMWSERPMTFETGEDFHISHTMRKYANIGTYVMPYDPNDNETKGSKYRGLSFISAAT 849
            +L+ELM++ S   +W   G     P  PKVTVILN FKR+ L  QLDSL  QT   H   VWV  F +P +    R+V+      +  + S Y+FK+YGRFQMAL    D V++VDDDMIPG K L  L H AGTE   +S+LGSIGR+LP   +D +  SYRK+ S   G+Y+PD  +D      V VD+L S WFL  E ++ ++ E PMTF TGED H+S+ ++KY N G++V+P DPND ET G     L+++S  T
Sbjct:  156 TLSELMSMKS---KWDLHG-----PNKPKVTVILNHFKRKTLCAQLDSLLQQTLPFH--HVWVLAFGSPNEVSLKRIVQSYNDSRISFISSSYDFKYYGRFQMALQTEADLVYIVDDDMIPGKKMLQILSHVAGTEKYKNSVLGSIGRILPFRQKDFTFPSYRKFRSKEAGLYLPDPAYDITIDKIVQVDFLSSSWFLSAELVKTLFVEAPMTFMTGEDLHLSYQLQKYRNAGSFVLPVDPNDKETWGDSEHRLAYVSETT 406          
BLAST of mRNA_H-elongata_contig77629.15446.1 vs. uniprot
Match: UPI000900D020 (uncharacterized protein LOC109173525 n=4 Tax=Ipomoea TaxID=4119 RepID=UPI000900D020)

HSP 1 Score: 221 bits (562), Expect = 3.250e-62
Identity = 120/261 (45.98%), Postives = 161/261 (61.69%), Query Frame = 1
Query:   76 SLNELMNLPSTNERWARDGKNGVLPGAPKVTVILNLFKREVLTEQLDSLFSQTTASHISEVWVCVFSAPAQDYALRVVKDSKYKNVRLVVSDYNFKFYGRFQMALTAPTDFVWLVDDDMIPGNKYLAQLMHAAGTELLGSSLLGSIGRVLPRPGRDMSLVSYRKWGS-HGGMYMPDYYWD--QHHAVPVDYLCSQWFLRPEWLQFMWSERPMTFETGEDFHISHTMRKYANIGTYVMPYDPNDNETKGSKYRGLSFISAAT 849
            +L+ELM + S   +W   G     P  PK+TVILN FKR+ L  QLDSL +QT   H   VWV  F +P +    R+V+      +  + S Y+FK+YGRFQMAL    D V++VDDDMIPG K L  L H AGTE   +S+LGSIGR+LP   +D S  SYRK+ S   G+Y+PD  +D      V VD+L S WFL  E ++ +++E P TF TGED H+S+ ++KY N G++V+P DPND ET G     L+++S  T
Sbjct:  165 TLSELMAMKS---KWDLRG-----PNRPKITVILNHFKRKTLCAQLDSLLNQTLPFH--HVWVLSFGSPNEQTLRRIVESYNDTRISFISSGYDFKYYGRFQMALQTEADLVYIVDDDMIPGKKMLQILAHVAGTEKYQNSVLGSIGRILPFRQKDFSFPSYRKFRSKEAGLYLPDPAYDILVDRIVQVDFLSSSWFLSAELIKTLFTETPFTFMTGEDLHLSYQLQKYRNAGSFVLPVDPNDKETWGDSEHRLAYVSETT 415          
BLAST of mRNA_H-elongata_contig77629.15446.1 vs. uniprot
Match: A0A426ZYP2_ENSVE (Uncharacterized protein n=5 Tax=Musaceae TaxID=4637 RepID=A0A426ZYP2_ENSVE)

HSP 1 Score: 221 bits (562), Expect = 3.500e-62
Identity = 120/275 (43.64%), Postives = 167/275 (60.73%), Query Frame = 1
Query:   34 DAYVAWHRRQGLAPSLNELMNLPSTNERWARDGKNGVLPGAPKVTVILNLFKREVLTEQLDSLFSQTTASHISEVWVCVFSAPAQDYALRVVKDSKYKNVRLVVSDYNFKFYGRFQMALTAPTDFVWLVDDDMIPGNKYLAQLMHAAGTELLGSSLLGSIGRVLPRPGRDMSLVSYRKWGS-HGGMYMPDYYWD--QHHAVPVDYLCSQWFLRPEWLQFMWSERPMTFETGEDFHISHTMRKYANIGTYVMPYDPNDNETKGSKYRGLSFISAAT 849
            D  +A+        +L ELM + S   +W+  G     P  PK+TVILN FKR+ L  QLDSL +QT   H   VWV  F +P++    R+V+      +  + S Y+FK+YGRFQMAL    DFV+++DDDMIPG K L  L H AGT+   +S+LGSIGR+LP   +D +  SYRK+ S   G+Y+PD  +D      V VD+L S WFL  + ++ ++ E P+TF TGED H+S+ ++KY N G+YV+P DPND ET G     L+++S  T
Sbjct:  136 DEVLAFQEESSGTETLAELMRMES---KWSPRG-----PSIPKITVILNHFKRKTLCAQLDSLLNQTLPFH--HVWVLSFGSPSELSLRRIVEGYNNSRISFISSSYDFKYYGRFQMALQTEADFVYILDDDMIPGKKMLEILSHVAGTDKYRNSVLGSIGRILPFRQKDFTFPSYRKFRSKEAGLYLPDPAYDITVDKIVQVDFLSSSWFLSADLVKTLFVETPVTFMTGEDLHLSYQLQKYRNAGSYVLPVDPNDKETWGDSEHRLAYVSETT 400          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig77629.15446.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LPR2_ECTSI1.340e-18988.77Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KPH5_9PHAE5.710e-18289.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A1J3I729_NOCCA2.690e-6642.96Uncharacterized protein (Fragment) n=1 Tax=Noccaea... [more]
Q9FF50_ARATH2.340e-6343.36Glycosyltransferase family protein 2 n=41 Tax=Bras... [more]
A0A7N0TYA9_KALFE6.600e-6346.74Uncharacterized protein n=1 Tax=Kalanchoe fedtsche... [more]
A0A6P5H2H3_ANACO1.130e-6242.96uncharacterized protein LOC109728978 n=3 Tax=Anana... [more]
A0A8B8ZHF4_PHODC1.520e-6242.96uncharacterized protein LOC103719835 n=1 Tax=Phoen... [more]
A0A067LHF7_JATCU2.210e-6246.36Uncharacterized protein n=1 Tax=Jatropha curcas Ta... [more]
UPI000900D0203.250e-6245.98uncharacterized protein LOC109173525 n=4 Tax=Ipomo... [more]
A0A426ZYP2_ENSVE3.500e-6243.64Uncharacterized protein n=5 Tax=Musaceae TaxID=463... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig77629contigH-elongata_contig77629:38..2812 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score539.3
Seed ortholog evalue1.1e-150
Seed eggNOG ortholog2880.D8LPR2
EggNOG OGs2CMCB@1,2QPYF@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionhypothetical protein
Ec32 orthologEc-18_002160.1
Exons4
Model size858
Cds size858
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig77629.15446.1prot_H-elongata_contig77629.15446.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig77629 38..2812 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931182.5439062-CDS-H-elongata_contig77629:37..4181622931182.5439062-CDS-H-elongata_contig77629:37..418Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig77629 38..418 +
1691679731.8620317-CDS-H-elongata_contig77629:37..4181691679731.8620317-CDS-H-elongata_contig77629:37..418Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig77629 38..418 +
1622931182.555959-CDS-H-elongata_contig77629:1372..15581622931182.555959-CDS-H-elongata_contig77629:1372..1558Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig77629 1373..1558 +
1691679731.8825753-CDS-H-elongata_contig77629:1372..15581691679731.8825753-CDS-H-elongata_contig77629:1372..1558Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig77629 1373..1558 +
1622931182.5675328-CDS-H-elongata_contig77629:2162..22821622931182.5675328-CDS-H-elongata_contig77629:2162..2282Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig77629 2163..2282 +
1691679731.8970153-CDS-H-elongata_contig77629:2162..22821691679731.8970153-CDS-H-elongata_contig77629:2162..2282Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig77629 2163..2282 +
1622931182.5845165-CDS-H-elongata_contig77629:2641..28121622931182.5845165-CDS-H-elongata_contig77629:2641..2812Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig77629 2642..2812 +
1691679731.9060283-CDS-H-elongata_contig77629:2641..28121691679731.9060283-CDS-H-elongata_contig77629:2641..2812Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig77629 2642..2812 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig77629.15446.1

>prot_H-elongata_contig77629.15446.1 ID=prot_H-elongata_contig77629.15446.1|Name=mRNA_H-elongata_contig77629.15446.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=286bp
QEGLLRQKNQLDAYVAWHRRQGLAPSLNELMNLPSTNERWARDGKNGVLP
GAPKVTVILNLFKREVLTEQLDSLFSQTTASHISEVWVCVFSAPAQDYAL
RVVKDSKYKNVRLVVSDYNFKFYGRFQMALTAPTDFVWLVDDDMIPGNKY
LAQLMHAAGTELLGSSLLGSIGRVLPRPGRDMSLVSYRKWGSHGGMYMPD
YYWDQHHAVPVDYLCSQWFLRPEWLQFMWSERPMTFETGEDFHISHTMRK
YANIGTYVMPYDPNDNETKGSKYRGLSFISAATTNR
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mRNA from alignment at H-elongata_contig77629:38..2812+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig77629.15446.1 ID=mRNA_H-elongata_contig77629.15446.1|Name=mRNA_H-elongata_contig77629.15446.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2775bp|location=Sequence derived from alignment at H-elongata_contig77629:38..2812+ (Himanthalia elongata Himel1 dioecious)
CAGGAGGGGCTGCTTCGCCAGAAAAATCAGCTCGACGCCTACGTCGCGTG GCACCGGCGACAGGGGCTGGCACCCTCGCTGAACGAGCTCATGAATCTTC CTTCCACGAACGAGCGCTGGGCACGGGACGGGAAGAACGGGGTCCTCCCG GGAGCCCCCAAGGTAACGGTCATCTTGAACCTCTTCAAGCGAGAGGTTCT AACGGAACAGCTCGACAGTCTGTTCTCGCAGACCACGGCGAGCCACATTT CTGAGGTGTGGGTATGTGTGTTCAGCGCCCCGGCGCAGGACTACGCCCTT CGAGTGGTGAAGGATTCCAAGTACAAGAACGTGCGCCTCGTTGTCAGCGA CTACAACTTCAAGTTCTACGGCCGTTTCCAGGTGAGTTCGATGACCCGTA CATAATGTAAAGAAATAGGTAGGCTATGTATGTATCTGTAGGTGTTCTTT AGGGAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAAGAAGGGAAAAA AAATTTTTTTAAGTTTGAGGGGAGGGNNNNNNNNNNGGGGTGGGGGGGGT GGGCGGGGGGTCGGGGGTGTGGGGGGGGGGGGGGGGGGGGGGGGGGTGTT GTGAGGGAGGGTAAGAAGGGACAAAACATTATTTTAAGCTTGAAGGGAAG GGAGAAGTTGGTCTGACAACGCAACGCAGCAGCGCTGATGCTGATTGGTC AGTGGATGCTGCAGTTGGGCGGAAAGACTCCGACGAGGCTACTCTTCCCT TTCTTCCCTATGCGTGCTTTGTAAGAGACCCGGGGGGGAAATATGGCAGT TGGATAATTAATCCTGTATTGAAATAGACGGATTGGATATTATGAAATAT GTTGAATTTGATTATTTTTTTTTAAAGATTGTATCCAATTGGATTGGATT GGATTTTTGCTTATATGAAAAAGCTGCCCAGTACTCTTCAAAAGCGTTTG ACGCGTATCAGACCTCGTGCGAAGAGAGTCTATTATTTAATAATAGTACC GTAGTTGATAAATTTAGCAGACTGCGTGCGAATATCCGTCTCTTAAAGAT CGCCAACTTTCCTTCCCTTTTCTCTTCTTCATCGCCATCACATCATCAAA ATCATCACACCACACCACACCACGCATGCACCGTGTGCTTGCGTTGTCTG GTCGGGTCCTCGGTACACACGCCTCCCCCTCGTCCGTCGCCCACCACCCC TCCGACCTTCTCTCACTTTGTACAATAATTTAATATATTTTGATACAGTA GGGAAACGTGTACATATATTATATATATATGTAATGTAACGTAACATGCT ATTCTCTCCCTTCGTCATGTTTCCCGATTCCTCAGATGGCCTTAACGGCG CCCACCGACTTCGTGTGGCTTGTGGACGACGACATGATCCCAGGCAACAA GTACTTGGCGCAGCTCATGCACGCCGCGGGAACGGAGCTCCTGGGGAGCT CCCTCCTGGGTAGCATCGGTAGGGTGCTTCCGAGGCCGGGCAGGGACATG TCGCTCGTCTCCTACCGAAAGGTACAAATAGATATATACTAATTAGATAT ATTATAATACTATACTGTAATGGAATGGAATGTGCATATTATATAGTAGT ATACTGTAGTATTATTAGAAGAGCATTAGCGCTACAAATGATGAAATAGT TTATTTGAGAGGAGGCTGGAGGGTTACAGGGAGGAGAGGAGGCTGGAAGT GTTGTTGACTTCCTCTCCCCCTCCCCCTCCCCTTTCACCTTCATCTGGAA GTGTTGTTGCCCCTACCTTTGTCATTGTTGTACCCCAAACCCACTTTACT TTACTTCCCGGCGAGAGAGTGTTCTCGTCTTCCGCCACGGAGTATTTTTG TTGGAAACACGATTATACGAATAATAGTATATATATATCACAGAATGCCT TGCAATATCGCGGAAAGCCTCGTACACTTTTTTTCTCTGGAAATACAGAA ACTATAATATATTTACAGTCTTATATATATAGAGAGATATATAAAACGCT TTGAGTTTTACGACTGCAGTTGATGGAGATATCTAGCGCAGAGCGGTTGG CGTGCACGCGAGCTAATGATCGCCGCCGTCGAACCGCGTCCCCTCCCCTT CCCCCTATATGATACTTGTGTGTAGTGGGGAAGTCATGGAGGCATGTACA TGCCGGACTACTACTGGGATCAGCACCATGCAGTGCCGGTGGACTACCTC TGCAGCCAATGGTTCCTCCGCCCCGAGTGGCTACAGTTTATGTGGGTGCG TTCTGGTCGGGCTGGAGACACCGACAGGGTTTCCCGTGAAATATTAGCCG AGGCGTTTTTTTTCTAGGTTTGATGAGGGAGAGAAGGATGATATTCGTGT TGGAGGATAAGGCGTGTATGAATGAAAACTGGGTGATATAATGATTACGC TTGTACGTCGTACCACATGTGCTGGGAGCTCGGTGGCCCCTTTGTCTGGC TTGGGAGTGAACCACGCCTGCAGCATATATTGTTGGAGGCGTTTTCTATC CCTCGTGGTTATCTGGGAAAGGCGGGGGTGTGCGTTGGTCGCGGAGGAGT CGAAATGAAAATATTAAACCAGATGTATGCCCCCCCCCACACGCGGTGCT GCAGAGCGAGCGGCCGATGACCTTTGAAACCGGAGAGGATTTCCACATAT CGCACACCATGCGCAAGTACGCCAACATCGGCACCTACGTGATGCCCTAC GACCCGAATGACAACGAGACCAAGGGGAGCAAGTACCGCGGGCTGTCGTT CATCAGCGCCGCGACCACCAACAGG
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Coding sequence (CDS) from alignment at H-elongata_contig77629:38..2812+

>mRNA_H-elongata_contig77629.15446.1 ID=mRNA_H-elongata_contig77629.15446.1|Name=mRNA_H-elongata_contig77629.15446.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1716bp|location=Sequence derived from alignment at H-elongata_contig77629:38..2812+ (Himanthalia elongata Himel1 dioecious)
CAGGAGGGGCTGCTTCGCCAGAAAAATCAGCTCGACGCCTACGTCGCGTG
GCACCGGCGACAGGGGCTGGCACCCTCGCTGAACGAGCTCATGAATCTTC
CTTCCACGAACGAGCGCTGGGCACGGGACGGGAAGAACGGGGTCCTCCCG
GGAGCCCCCAAGGTAACGGTCATCTTGAACCTCTTCAAGCGAGAGGTTCT
AACGGAACAGCTCGACAGTCTGTTCTCGCAGACCACGGCGAGCCACATTT
CTGAGGTGTGGGTATGTGTGTTCAGCGCCCCGGCGCAGGACTACGCCCTT
CGAGTGGTGAAGGATTCCAAGTACAAGAACGTGCGCCTCGTTGTCAGCGA
CTACAACTTCAAGTTCTACGGCCGTTTCCAGCAGGAGGGGCTGCTTCGCC
AGAAAAATCAGCTCGACGCCTACGTCGCGTGGCACCGGCGACAGGGGCTG
GCACCCTCGCTGAACGAGCTCATGAATCTTCCTTCCACGAACGAGCGCTG
GGCACGGGACGGGAAGAACGGGGTCCTCCCGGGAGCCCCCAAGGTAACGG
TCATCTTGAACCTCTTCAAGCGAGAGGTTCTAACGGAACAGCTCGACAGT
CTGTTCTCGCAGACCACGGCGAGCCACATTTCTGAGGTGTGGGTATGTGT
GTTCAGCGCCCCGGCGCAGGACTACGCCCTTCGAGTGGTGAAGGATTCCA
AGTACAAGAACGTGCGCCTCGTTGTCAGCGACTACAACTTCAAGTTCTAC
GGCCGTTTCCAGATGGCCTTAACGGCGCCCACCGACTTCGTGTGGCTTGT
GGACGACGACATGATCCCAGGCAACAAGTACTTGGCGCAGCTCATGCACG
CCGCGGGAACGGAGCTCCTGGGGAGCTCCCTCCTGGGTAGCATCGGTAGG
GTGCTTCCGAGGCCGGGCAGGGACATGTCGCTCGTCTCCTACCGAAAGAT
GGCCTTAACGGCGCCCACCGACTTCGTGTGGCTTGTGGACGACGACATGA
TCCCAGGCAACAAGTACTTGGCGCAGCTCATGCACGCCGCGGGAACGGAG
CTCCTGGGGAGCTCCCTCCTGGGTAGCATCGGTAGGGTGCTTCCGAGGCC
GGGCAGGGACATGTCGCTCGTCTCCTACCGAAAGTGGGGAAGTCATGGAG
GCATGTACATGCCGGACTACTACTGGGATCAGCACCATGCAGTGCCGGTG
GACTACCTCTGCAGCCAATGGTTCCTCCGCCCCGAGTGGCTACAGTTTAT
GTGGTGGGGAAGTCATGGAGGCATGTACATGCCGGACTACTACTGGGATC
AGCACCATGCAGTGCCGGTGGACTACCTCTGCAGCCAATGGTTCCTCCGC
CCCGAGTGGCTACAGTTTATGTGGAGCGAGCGGCCGATGACCTTTGAAAC
CGGAGAGGATTTCCACATATCGCACACCATGCGCAAGTACGCCAACATCG
GCACCTACGTGATGCCCTACGACCCGAATGACAACGAGACCAAGGGGAGC
AAGTACCGCGGGCTGTCGTTCATCAGCGCCGCGACCACCAACAGGAGCGA
GCGGCCGATGACCTTTGAAACCGGAGAGGATTTCCACATATCGCACACCA
TGCGCAAGTACGCCAACATCGGCACCTACGTGATGCCCTACGACCCGAAT
GACAACGAGACCAAGGGGAGCAAGTACCGCGGGCTGTCGTTCATCAGCGC
CGCGACCACCAACAGG
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