mRNA_H-elongata_contig77198.15393.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig77198.15393.1
Unique NamemRNA_H-elongata_contig77198.15393.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig77198.15393.1 vs. uniprot
Match: D7G6L9_ECTSI (BNR repeat domain protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6L9_ECTSI)

HSP 1 Score: 666 bits (1719), Expect = 9.890e-235
Identity = 310/446 (69.51%), Postives = 362/446 (81.17%), Query Frame = 1
Query:    1 QLGNGETSAYECSPAEICLAKLETPLQVSAGEEHCVALVDVVRQDRHRDIVAFAWGNPENGRLGTQRGRTHAMPLEVEDLTEALRKSKRKPTSLSCGGSHTLAVLSSGEVAAWGGGGYGQLGDGQMWDRPESVMVAGLQGVRSASAGARHSIALAVDLTSTQVWGWGFNRWGEVGVGDDCIRLQPQWVSGMDSCTVQRVVAGERHTIALTDGKALRVKDLPEYREFIDAFRKGGLVVYDALKKAMAENNMNPDWLDTPLEYFPGQPGMTEAECRKGTIGLHMDWCLDAAPPGKDFF--LRGGHEVVYFCHPCRRERICLACARKCHSKHCIEPTFRLRSAAEPCDCSTSPGVCTRMWSPMRIQFRNMTASGAAPGDPVLDEDGSLHSSGLRELLEVVRGNAAPVGREDVEDGLSQLTQGGEYEWIGFLQFERWYKEYFGKIDANLE 1332
            QLG GE    E SP  I   K ETPL++SAG +H VA+VD++R ++ RDIVA+AWGNP++GRLG++R +THA P+EVEDLT ALRK KR    +S GG+HTLAVL SGEVAAWGGG YGQLGDG MWDRPESVM  GLQGVRS SAGARHS ALAVD+  TQVWGWGFNRWGE+G GD+ +RLQP  V G+D CTVQ VVAGERHTIALT+GKALRVKDL +YR FI+A++KGGL+VYDALKK M +  +NPDWLDTPLE+FPGQPGMT AECR GT   HMDWC+D APPGKD F  LRGGHE+VY C PC+R+R+CLACARKCHSKHCIEP FRLR  ++PCDCST+PG+C   WSPMR  FR MTASG  PG+P L +DG LH S LRELL++VRG AA V  +DV++GL+ LTQGGE E IG+L FERWY+E+F KIDA L+
Sbjct:  217 QLGTGEAGECERSPVAIRWTKRETPLKISAGADHSVAMVDLLRPNQRRDIVAYAWGNPDHGRLGSERQQTHASPMEVEDLTHALRKLKRTIAGVSAGGTHTLAVLGSGEVAAWGGGMYGQLGDGHMWDRPESVMATGLQGVRSVSAGARHSTALAVDMAGTQVWGWGFNRWGELGGGDESVRLQPYRVGGLDGCTVQHVVAGERHTIALTNGKALRVKDLGDYRGFINAYKKGGLMVYDALKKTMEKQKLNPDWLDTPLEFFPGQPGMTSAECRLGTAEPHMDWCMDTAPPGKDVFDSLRGGHEIVYVCRPCKRDRVCLACARKCHSKHCIEPAFRLRDGSKPCDCSTTPGMCACKWSPMREHFRAMTASGVTPGNPALGDDGLLHPSELRELLQIVRGGAAFVTSDDVDEGLALLTQGGEKERIGYLPFERWYEEHFSKIDAELD 662          
BLAST of mRNA_H-elongata_contig77198.15393.1 vs. uniprot
Match: A0A7S2C678_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2C678_9STRA)

HSP 1 Score: 229 bits (583), Expect = 6.970e-67
Identity = 145/423 (34.28%), Postives = 208/423 (49.17%), Query Frame = 1
Query:  112 LVDVVRQDRHRDIVAFAWGNPENGRLGTQRGRTHAMPLEVEDLTEALRKSKRKPTSLSCGGSHTLAVLSS-GEVAAWGGGGYGQLGDGQMWDRPESVMVAGLQGVRSASAGARHSIAL-------------AVDLTSTQVWGWGFNRWGEVGVGDDCIRLQPQWVSGMDSCTVQRVVAGERHTIALTDGKALRVKDLPEYREFIDAFRKGGLVVYDALKKAMAENNMNPDWLDTPLEYFPGQPGMTEAECRKGTIGLHMD----WCLDAAPPGKDF-FLRGGHEVVYFCHPCRRERICLACARKCHSKHCIEPTFR-LRSAAEPCDCSTSPGVCTRMWSPMRIQFRNMTASGAAPGDPVLDEDGSLHSSGLRELLEVVRGNAAPVGREDVEDG----LSQLTQGGEYEWIGFLQFERWYKEYF 1308
            ++ V R D   +   + WG   NGRLG     TH  P E+ +LT  +R+   + +++  GGSHTLA  +  G V AWG G YGQLG G+  D  + V+V  L+ V +  AG RHS+A+             A      ++W WG+N WGE G+GD  IRLQP  V  ++   V    AG+ HT+  T G   ++ D  EY ++ D  R+ G +VY +LK  M  N  +P  LD P +  PGQPG    E +K T  LH +    +CLD   PGKD   LR   E V+     +   +C ACAR+CH+   +E  FR        CDCS SP  C  + S MR QF  +            D++ ++    LR++L  VR        ED+++     L++L     + W+    F+ WY  Y+
Sbjct:    1 MITVTRADNRTETAVYGWGCHANGRLGYVNVATHHSPQEILNLTSLMRRRGLEVSTVKAGGSHTLATTTGRGRVVAWGAGTYGQLGSGRNEDETDPVIVNFLKNVVAVVAGYRHSLAIVGLERMYTGAKSKAKRGIKGELWAWGYNNWGEAGMGDTAIRLQPHPVRALEGVLVTDASAGQHHTLICTTGDTKKIGDKKEYAKYFDLLREEGEMVYHSLKSDMQANGFDPSDLDHPEKVVPGQPGF---EVKK-TFTLHYEPGLRYCLDTIEPGKDNEHLRVMFETVHRVPSVQLATVCAACARRCHATRYVEAQFRQFIPGTSICDCSKSPH-CICLASTMRSQFDAIADKHGVRPKRGTDKE-TVPFDRLRDVLAAVRAPKGGYNIEDLDNARNFLLNELGSDKPFTWV---VFQTWYLRYY 414          
BLAST of mRNA_H-elongata_contig77198.15393.1 vs. uniprot
Match: A0A7S3JYD7_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JYD7_9STRA)

HSP 1 Score: 224 bits (571), Expect = 9.580e-64
Identity = 142/451 (31.49%), Postives = 216/451 (47.89%), Query Frame = 1
Query:   46 EICLAKLETPLQVSAGEEHCVALVDVVRQDRHRDIVAFAWGNPENGRLGTQRGRTHAMPLEVEDLTEALRKSK----RKPTS------LSCGGSHTLAVLSSGEVAAWGGGGYGQLGDGQMWDRPESVMVAGLQGVRSASAGARHSIALA---------VDLTSTQVWGWGFNRWGEVGVGDDCIRLQPQWVSGMDSCTVQRVVAGERHTIALTDGKALRVKDLPEYREFIDAFR-KGGLVVYDALKKAMAENNMNPDWLDTPLEYFPGQPGMTEAECRKGTIGLHMD-WCLDAAPP--GKDFFLRGG----HEVVYFCHPCRRERICLACARKCHSKHCIEPTF-RLRSAAEPCDCSTSPGVCTRMWSPMRIQFRNMTASGAAPGDPVLDEDGSLHSSGLRELLEVVRGNAAPVGREDVEDGLSQLTQGGEYEWIGFLQFERWYKEYFGK 1314
            E C  +  +   ++AG  HCV + D  R  + +D +A+AWG+  + RL     +    P  V  L+  L++ +    + P        + CGG HTL   + G++ AWG G +GQLG G+ WDR + V++  L GV   +AG+RHS+A+           +  + +V+ WGF  WGE+G GD  + L P  V G+D        AG+RHTI LT G+AL  +    Y + I+     GG  +   L+  + +  +NP  LD P +  PGQPG+ E  C    +      +CLD  P     D  +R      +E V  C+PC+ +RIC AC R+CH  HC+ P F R    ++ C C  + G C   WS  R  F N+         P  +E  SL    L  LL+++  +   +  +D +     L     Y  I + QF +W+  YF +
Sbjct:   92 EPCDRRQPSIRDIAAGAIHCVVIADRYRGKKEKDTLAYAWGDTNDSRLADANPKKFHTPQVVPALSLLLKQRRLLLAKAPCDPGDSPIIVCGGGHTLVRTNFGQLIAWGAGSHGQLGYGEQWDRQDCVLIPDLYGVIDMAAGSRHSVAIVGLDAQTDHQSNTRNGRVFTWGFGYWGELGQGDFEVHLLPTQVRGLDQSVAIACAAGDRHTIVLTTGRALSYRQDSRYADTIEILEHSGGRPLESQLRNQLTDAGLNPSALDDPDQPEPGQPGVEEKTCLPRPLPEPATRYCLDTIPSVDPNDLVMRSARRASYETVATCNPCKIQRICRACIRRCHHGHCLVPDFCRWAPGSDQCGCLRN-GHCKAKWSAERAIFDNLVDQT----HPSAEETISLDQ--LDHLLDLLHPDEN-LTEDDYDSAHVALRSSSRY--INWFQFNKWHTPYFAE 532          
BLAST of mRNA_H-elongata_contig77198.15393.1 vs. uniprot
Match: A0A7S1TNR9_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TNR9_9STRA)

HSP 1 Score: 216 bits (550), Expect = 4.530e-59
Identity = 125/386 (32.38%), Postives = 184/386 (47.67%), Query Frame = 1
Query:   28 YECSPAEICLAKLETPLQVSAGEEHCVALVDVVRQDRHRDIVAFAWGNPENGRLGTQRGRTHA-MPLEVEDLTEALRKSKRKPTSLSCGGSHTLAVLS-SGEVAAWGGGGYGQLGDGQMWDRPESVMVAGLQGVRSASAGARHSIALA----VDLTSTQ--------------------------VWGWGFNRWGEVGVGDDCIRLQPQWVSGMDSCTVQRVVAGERHTIALTDGKALRVKDLPEYREFIDAFRKGGLVVYDALKKAMAENNMNPDWLDTPLEYFPGQPGMTEAECRKGTIGLHMDWCLDAAPPGKDFFL-RGGHEVVYFCHPCRRERICLACARKCHSKHCIEPTFRLRSAAEPCDCSTSPGVCTRMWSPMRIQF 1086
            ++  P EI   K E    V  G EH VALV+V R +    + A+ WGN E+GRLG      +   P EV  L + LR  +     ++ GG HTL ++  +G++  WG G YG +G G+ WD  +   +  ++       G  HS+AL     +    T+                          VW WGFN +GE+G+GD  +RLQP  +S M    V  + AG+RH+I LT G A +V+D P+Y+ + D   + G++VY+ LKK M    +NP +LD P    PGQPG  + +C    +     +C +  P   D  + RG +   Y         +C+AC R+CH+    E  FR     + CDC  S   C   W+P+R  F
Sbjct:  250 FDALPGEIDFMKTEVCKGVDCGAEHTVALVEVERVNGKTQVTAYTWGNAEDGRLGAGADPANRHKPQEVTGLRDLLRAYRLNLQDVAAGGWHTLCLVEKNGQLIGWGRGMYGAVGYGKNWDVADPTPIPLVRAADKIVCGHNHSMALVGRGEISTEETRXXXXXXXXGERPEPRGPDEDAATQEGVWVWGFNNYGELGLGDTDVRLQPARLSPMQRAKVVDIAAGKRHSIVLTMGLARKVRDEPDYKPYFDTLMQEGILVYEILKKTMKSKGLNPRYLDQPNLILPGQPGAEDRDCPPAALDPTYRYCYNTKPGDADDAMHRGVYRTEYRIPSLGMRSVCMACIRRCHATRHAEAVFRKHRPGDFCDCGASEH-CRAAWTPLRDVF 634          
BLAST of mRNA_H-elongata_contig77198.15393.1 vs. uniprot
Match: A0A8J2SU15_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SU15_9STRA)

HSP 1 Score: 184 bits (468), Expect = 2.180e-48
Identity = 125/427 (29.27%), Postives = 200/427 (46.84%), Query Frame = 1
Query:   91 GEEHCVALVDVVRQDRHRDIVAFAWGNPENGRLGTQRGRTHAMPLEVEDLTEALRK---------SKRKPTSLSCGGSHTLAVLSSGEVAAWGGGGYGQLGDGQMWDRPESVMVAGLQGVRSASAGARHSIALAVDLTSTQ----VWGWGFNRWGEVGVGDDCIRLQPQWVSGMDSCTVQRVVAGERHTIALTDGKALRVKDLPEYREFIDAFRKG-GLVVYDALKKAMAENNMNPDWLDTPLEYFPGQPGMTEAECRKGTIGLHMDWCLDAAPPGKDFFLRGGHEVVYFCHPCRRERICLACARKCHSKHCIEPTF-RLRSAAEPCDCSTSPGVCTRMWSPMRIQFRNMTASGAAPGDPVLDEDGSLHSSGLRELLEVVRGNAAPVGREDVEDGLSQL-TQGGEYEWIGFLQFERWYKEYFGKIDA 1323
            GE H V + D        D  A++WG+P + RLG    R H  P  V+ +   L +          + K + +SCG +HTL + ++G+  AWG G YGQLG G +WDR E V+V G+  V + + G RH+IA A    +      V+ WG N +GE+G+GD  +RLQP  +  ++  +++   AG RH++ L    + R ++ P  R  I    +   +  +D L+    +   +           PG                 + +CLD  P  ++  +R  +E V  C PCR+  +C +CAR+CH+ H +E  F R   + + C C+ S G C+  WS  R  F N         + V D  G L     +ELL+V+      +  +D++ G   L ++ G   W  F   ++W+  YF  I +
Sbjct:  219 GEAHTVVIADAGHAGL--DARAYSWGDPNDSRLGGVDVRLHHSPQLVKTINHTLERLRLNIAKEAQQPKNSIVSCGIAHTLVLTTTGQFLAWGCGKYGQLGYGDLWDREEPVVVPGVHSVLTFATGNRHNIAAACPHAALAKRETVYAWGSNAFGELGLGDTNVRLQPATLCTLNE-SIKGCAAGARHSLVLARASSTRSRNAPWNRISIHGDSEEISIFHFDVLRNKFKDRRQS--------HVLPG-----------------LRYCLDTLPADQNASVRFTYESVLRCFPCRQSYVCRSCARRCHTNHNVEAKFVRWMPSCDRCGCAES-GSCSAAWSWERSIFDNFVTQTTTSPNKVTD--GVLDMRHFKELLQVMHPEG--LSEDDIDSGEVALHSRAGTITWAAF---QKWHNPYFEVITS 609          
BLAST of mRNA_H-elongata_contig77198.15393.1 vs. uniprot
Match: A0A812V1E0_SYMMI (PRAF1 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812V1E0_SYMMI)

HSP 1 Score: 165 bits (418), Expect = 2.430e-42
Identity = 132/450 (29.33%), Postives = 200/450 (44.44%), Query Frame = 1
Query:    4 LGNGETSAYECSPAEICLAKLETPLQVSAGEEHCVALVDVVRQDRHRDIVAFAWGNPENGRLGTQRGRTHAMPLEVED-LTEALRKSKRKPTSLSCGGSHTLAV------------------------LSSG-----------EVAAWGGGGYGQLGDGQMWDRPESVMVAGLQGVRSASAGARHSIALA----VDLTSTQVWGWGFNRWGEVGVGDDCIRLQPQWVSGMDSCTVQRVVAGERHTIALTDGKALRVKDLPEYREFIDAFRKGGL-VVYDALKKAMAENNMNPDWLDTPLEYFPGQPGMTEAECRKGTIGLHMDWCLDAAPPGKDF-FLRGGHEVVYFCHPCRRERICLACARKC-HSKHCIEPTFRLRSAAEPCDCSTSPGVCTRMWSPMRIQFRNMTASGAAPGDPVLDEDGSLHSSGLRELLEVVRGNAAPVGREDVE 1224
            LG+G+   ++  P ++   +     QV+ G+ H +      +         F+WG  E G+LG    R H  P+EV   L   +   +     ++CG +H+LA+                        LSSG           +V  WGGG YGQLGDG  WD P   +V  ++ V   SAG RHS  +A    +D     VW WG N +G++G+GD  IRL P  ++      V  V AG+RHT+ +T  K L  +D P  R+F     +G   +V   L   +  N M+   LD P +    Q G +E E       + + +C+D         + R G E  Y C     + +C+ACAR+C  S+       + R+ ++ CDC TS G CT  W+ +R +   +    A  G P    DG +    +R++L  +R +  PV   DVE
Sbjct:   44 LGHGDEETWQL-PRQVMSLQRHRVKQVALGKFHALCTTYAGK--------LFSWGRNEKGQLG----RGHKSPMEVTPGLVADINTDREHTLDIACGLAHSLAIVRMKRRDNSVNDYVYGWGDYECGQLSSGFHNMLLVGPVRQVITWGGGLYGQLGDGFAWDNPRPQVVPNVKNVLQMSAGMRHSAVVAGVGGLDGIP-DVWVWGDNMYGQLGLGDLDIRLSPTIMTACRRMRVTGVSAGDRHTVFVTSHKPLVARDNPMLRDFFRILEEGASRLVRHRLGLELKRNGMDASLLDDPNKVMVDQAGKSEREICNEEFEVGLKYCMDTRESLPQLQWRRKGLECAYECPALGLKAVCMACARRCVKSRKLFLYLRKRRNKSDVCDCRTS-GNCTCAWTLVREKIDRVVEE-AVDGRPT---DGMIGPDSVRKVLVALR-SPIPVDGADVE 473          
BLAST of mRNA_H-elongata_contig77198.15393.1 vs. uniprot
Match: A0A836CAC7_9STRA (Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAC7_9STRA)

HSP 1 Score: 159 bits (402), Expect = 1.200e-38
Identity = 103/276 (37.32%), Postives = 149/276 (53.99%), Query Frame = 1
Query:    1 QLGNGETSAYECSPAEICLAKL-ETPLQVSAGEEHCVALVDVVRQDRHRDIV-AFAWGNPENGRLGTQRGRTHAM----PLEVEDLTEALRKSKRKPTSLSCGGSHTLAVLS-SGEVAAWGGGGYGQLGDGQMWDRPESVMVAGLQGVRSASAGARHSIALAVDLTSTQVWGWGFNRWGEVGVGDDCIRLQPQWVSGMDS--CTVQRVVAGERHTIALTDGKALRVKDLPEYREFIDAFRK-GGLVVYDALKKAMAENNMNPDWLDTPLEYFPGQP 798
            Q+G G  +  E +P  +  +   +TPLQ++ G  H + +V V   +R    +  + WG+  +GRLG    R+ A     P+E+E +T  LRKS R   +++ G +H++AVL  + EV AWG G YGQLG+G        V V GL  V +  AG RH+ A+        ++ WG+N WGE GVG       P+ V G+ +   +V  V AG RHT+ALT G+AL  +D P YREF D     GG V   AL++AM   +++ D L+ P    P QP
Sbjct:  255 QVGVGGGAHAEAAPRAMGWSPATQTPLQIACGAHHSLCVVAVKAPNRKAAALRVYGWGDAGDGRLGAAAARSGAAFVDRPVEMEAVTALLRKSGRAVVAVAAGSAHSMAVLDVTREVIAWGQGLYGQLGEGSNRSTDIPVYVRGLSDVVTLVAGDRHNAAICA---GGALYTWGWNNWGEAGVGTCSCLQTPKEVLGLAAYNTSVLSVAAGGRHTVALTSGRALLARDSPAYREFQDTLAAPGGYVARGALREAMRRRDLDSDLLERPSAPLPRQP 527          
BLAST of mRNA_H-elongata_contig77198.15393.1 vs. uniprot
Match: F0YNA9_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YNA9_AURAN)

HSP 1 Score: 137 bits (344), Expect = 3.280e-31
Identity = 122/434 (28.11%), Postives = 187/434 (43.09%), Query Frame = 1
Query:   52 CLAKLETPLQVSAGEEHC--VALVDVVRQ-------------DRHRDIVAFAWGNPENGRLGTQRGRTHAMPLEVEDLTEALRKSKRKPTSLSCGGSHTLAVLSSGEVAAWGGGGYGQLGDGQMWDRPESVMVAGLQGVRSA------SAGARHSIALAVDLTSTQVWGWGFNRWGEVGVG--DDCIRLQPQWVSGMDSCTVQRVVAGERHTIALTDGKALRVKDLPEYREFIDAFRKGGLVVYDALK-KAMAENNMNPDWLDTPLEYFPGQPGMTEAECRKGTIGLHMD------WCLDAAPP---GKDFFLRGGHEVVYFCHPCRRERICLACARKCHSKHCIEPTF-RLRSAAEPCDCSTSPGVCTRMWSPMRIQFRNMTASGAAPGDPVLDEDGSLHSSGLRELLEVVRGNAAPVGREDVEDGLSQLTQG 1251
            C+A +     ++ G  HC  + +  V R               R   ++A+AWG+PE+ RLG            V+D  E         T ++CG SH L + ++G + AWG G YGQLG G +WDR E V+V  ++  +S        +    S +LA       ++ WGFN +GE+G+G  D+ IRLQP  V  + S       AG RH++ LT GK L                 GG+     L   +  E  ++   +    +YF       EA   K  I   +       +CLD  P    G  F  R  +E V  C PCR+  +C ACAR+CHS H  +  F R   +   C C+ S G C  ++S  R  F ++            +++ ++     RELL+++      +  +D++ G   L  G
Sbjct:  142 CVALMSNDQLLTWGRNHCGQIGIGSVSRACTRPVLIELEPGGGRSPSVMAYAWGDPEDSRLGG-----------VDDSHEQ--------TIIACGVSHNLILTTAGRLLAWGCGRYGQLGYGDLWDREEPVVVPTVRSNQSPLMTEAKGSSTLCSSSLASAKKHGTIFAWGFNSFGELGLGAWDEDIRLQPVSVRALSSSNTLDCAAGARHSLVLTHGKTL----------------SGGMHKDACLDTNSRRELRLDTKRVQEDAQYF-------EALRNKIVISYSLPFEPELRYCLDTIPADQGGLIFARRFTYESVVTCLPCRQLLVCRACARRCHSNHMTKVKFSRWTVSQNRCGCADS-GRCRVVYSSERGIFDSLVDRSNVQVTSSENKE-TISMQFFRELLKLLHPEG--LSEDDIDSGEVALHSG 529          
BLAST of mRNA_H-elongata_contig77198.15393.1 vs. uniprot
Match: A0A482RQ19_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RQ19_9ARCH)

HSP 1 Score: 108 bits (271), Expect = 2.130e-22
Identity = 82/296 (27.70%), Postives = 129/296 (43.58%), Query Frame = 1
Query:  400 MVAGLQGVRSASAGARHSIALAVDLTS-TQVWGWGFNRWGEVGVGDDCIRLQPQWVSGMDSCTVQRVVAGERHTIALTDGKALRVKDLPEYREFIDAFRKGGLVVYDALKKAMA-----ENNMNPDWLDTPLEYFPGQPGMTEAECRKGTIGLHMDWCLDAAPPGKDFFLRGGHEVVYFCHPCRR---ERICLACARKCHSKHCIEPTFRLRS-----AAEPCDCSTSPGVCTRMWSPMRIQFRNMTASGAAPGDPVLDEDGSLHSSGLRELLEVVRGNAAPVGREDVEDGLSQLT 1245
            M   L+ +   SAG RH I  A    S   ++ WG+N WGE+G+GD  IRL P  ++ +  C +  +  GERH++ +T  K +  K++P  +       +        L K +      +  + P  LD P    P QPG +            + +C+D      D+  R   E  +  H   +   + +CL+CAR+C   H + P  R R+     ++  CDC+ + G C   WSP+R  F +     A       DE   LH   LR L++ +R    PV   D++D     T
Sbjct:    1 MQHSLEKIFKLSAGLRHCICAAESSHSLADIFAWGYNNWGELGLGDTDIRLYPTKITALRQCKILSLACGERHSVMVTSHKPMLAKNVPSLKPMFHMLSEEDAKYRKHLLKKLKVRIQRDGMLPPSVLDNPNAPLPNQPGSSAEPIPNDRFEKGLRYCMDTFKDLLDW-RRQSMEACFTVHISPKLTLKSVCLSCARRCLRHHRLVPYIRPRTLVAEGSSLQCDCNLT-GNCRCRWSPIREVFDSFAVHEA-------DECIGLHQ--LRSLVKRLR-FPFPVEAADLDDANMTFT 284          
BLAST of mRNA_H-elongata_contig77198.15393.1 vs. uniprot
Match: A0A162AH66_DAUCS (Uncharacterized protein n=2 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=A0A162AH66_DAUCS)

HSP 1 Score: 100 bits (250), Expect = 1.570e-19
Identity = 71/217 (32.72%), Postives = 106/217 (48.85%), Query Frame = 1
Query:    1 QLGNGETSAYECSPAEICLAKLETPLQVSAGEEHCVALVDVVRQDRHRDIVAFAWGNPENGRLGTQRGRTHAMPLEVEDLTEALRKSKRKPTSLSCGGSHTLAVLSSGEVAAWGGGGYGQLGDGQMWDRPESVMVAGLQG--VRSASAGARHSIALAVDLTSTQVWGWGFNRWGEVGVGDDCIRLQPQWVSGMDSCTVQRVVAGERHTIALTDGKAL 645
            QLG+G+      SP  +     +  + VS G +H  A  ++ RQ        ++WG  + GRLG        +P  ++ L     K       ++CG SH LAV   GEV +WG    GQLG G + D      V   QG  VR  +AGA H++A+  D     ++GWG+ R+G +G+GD   RL P+ VS +D   +  +  G RHTI+++    L
Sbjct:   47 QLGHGDAED-RISPTRLSTLDGQEIVSVSCGADHSTAYSELSRQ-------VYSWGWGDFGRLGHGNSSDVFIPQPIKALYGMRIKQ------IACGDSHCLAVSMEGEVHSWGRNQNGQLGLGTIEDSLVPQKVQAFQGIAVRMVAAGAEHTVAITED---GDLYGWGWGRYGNLGLGDRNDRLVPEKVSNVDDEEMVLIACGWRHTISVSSSGGL 246          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig77198.15393.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6L9_ECTSI9.890e-23569.51BNR repeat domain protein n=2 Tax=Ectocarpus TaxID... [more]
A0A7S2C678_9STRA6.970e-6734.28Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S3JYD7_9STRA9.580e-6431.49Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S1TNR9_9STRA4.530e-5932.38Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A8J2SU15_9STRA2.180e-4829.27Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A812V1E0_SYMMI2.430e-4229.33PRAF1 protein n=1 Tax=Symbiodinium microadriaticum... [more]
A0A836CAC7_9STRA1.200e-3837.32Regulator of chromosome condensation 1/beta-lactam... [more]
F0YNA9_AURAN3.280e-3128.11Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A482RQ19_9ARCH2.130e-2227.70Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A162AH66_DAUCS1.570e-1932.72Uncharacterized protein n=2 Tax=Daucus carota subs... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig77198contigH-elongata_contig77198:172..1518 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score667.2
Seed ortholog evalue5.6e-189
Seed eggNOG ortholog2880.D7G6L9
KEGG koko:K10614
KEGG Pathwayko04120,map04120
EggNOG free text desc.guanyl-nucleotide exchange factor activity
EggNOG OGsCOG5184@1,KOG1426@2759
EC2.3.2.26
COG Functional cat.DZ
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko04121
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionRegulator of chromosome condensation, RCC1
Ec32 orthologEc-00_009930.2
Exons1
Model size1347
Cds size1347
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931176.9524546-CDS-H-elongata_contig77198:171..15181622931176.9524546-CDS-H-elongata_contig77198:171..1518Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig77198 172..1518 -
1691679729.827799-CDS-H-elongata_contig77198:171..15181691679729.827799-CDS-H-elongata_contig77198:171..1518Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig77198 172..1518 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig77198.15393.1prot_H-elongata_contig77198.15393.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig77198 172..1518 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig77198.15393.1

>prot_H-elongata_contig77198.15393.1 ID=prot_H-elongata_contig77198.15393.1|Name=mRNA_H-elongata_contig77198.15393.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=449bp
QLGNGETSAYECSPAEICLAKLETPLQVSAGEEHCVALVDVVRQDRHRDI
VAFAWGNPENGRLGTQRGRTHAMPLEVEDLTEALRKSKRKPTSLSCGGSH
TLAVLSSGEVAAWGGGGYGQLGDGQMWDRPESVMVAGLQGVRSASAGARH
SIALAVDLTSTQVWGWGFNRWGEVGVGDDCIRLQPQWVSGMDSCTVQRVV
AGERHTIALTDGKALRVKDLPEYREFIDAFRKGGLVVYDALKKAMAENNM
NPDWLDTPLEYFPGQPGMTEAECRKGTIGLHMDWCLDAAPPGKDFFLRGG
HEVVYFCHPCRRERICLACARKCHSKHCIEPTFRLRSAAEPCDCSTSPGV
CTRMWSPMRIQFRNMTASGAAPGDPVLDEDGSLHSSGLRELLEVVRGNAA
PVGREDVEDGLSQLTQGGEYEWIGFLQFERWYKEYFGKIDANLEREDT*
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mRNA from alignment at H-elongata_contig77198:172..1518-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig77198.15393.1 ID=mRNA_H-elongata_contig77198.15393.1|Name=mRNA_H-elongata_contig77198.15393.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1347bp|location=Sequence derived from alignment at H-elongata_contig77198:172..1518- (Himanthalia elongata Himel1 dioecious)
CAGCTCGGGAATGGAGAAACCAGCGCGTACGAATGCTCACCTGCTGAAAT ATGTTTGGCGAAGCTGGAAACTCCACTCCAGGTGTCAGCGGGGGAAGAAC ACTGCGTCGCCCTGGTGGACGTTGTGCGCCAGGATCGCCACCGAGATATC GTCGCTTTCGCATGGGGCAACCCAGAAAATGGACGCCTTGGTACACAGCG GGGACGAACACATGCAATGCCTTTGGAAGTCGAAGATCTAACCGAAGCGC TTCGAAAATCTAAGCGCAAACCCACGAGTCTCTCGTGCGGCGGGAGTCAT ACTTTGGCGGTCCTGAGCTCAGGGGAGGTGGCCGCGTGGGGTGGGGGGGG GTACGGCCAGCTTGGCGACGGTCAAATGTGGGACAGACCGGAATCGGTGA TGGTTGCCGGGCTGCAGGGAGTGCGATCTGCCAGCGCCGGGGCAAGGCAT TCTATTGCTCTAGCAGTGGACCTCACTAGCACCCAGGTGTGGGGCTGGGG TTTCAACCGCTGGGGAGAAGTTGGCGTCGGAGACGACTGCATTCGGCTGC AGCCTCAGTGGGTAAGCGGCATGGATAGTTGCACCGTGCAACGCGTTGTC GCGGGGGAGAGGCACACGATTGCCTTGACGGATGGAAAGGCCTTACGCGT TAAAGATCTACCAGAATACCGAGAGTTCATCGACGCCTTTCGGAAGGGAG GTCTCGTAGTGTATGACGCCCTCAAGAAAGCCATGGCCGAAAATAATATG AATCCTGATTGGCTAGACACGCCTCTCGAGTACTTCCCTGGACAGCCGGG GATGACTGAAGCGGAATGTCGCAAGGGAACGATAGGGCTCCACATGGATT GGTGCCTCGACGCGGCGCCGCCGGGCAAGGATTTCTTCCTCAGGGGAGGA CACGAGGTCGTATATTTCTGTCATCCCTGCCGGCGCGAGAGAATTTGCCT TGCTTGTGCACGTAAGTGCCACTCCAAGCACTGCATCGAACCTACCTTTC GCCTCAGAAGCGCGGCCGAACCGTGCGACTGTAGCACATCGCCAGGCGTA TGCACTCGCATGTGGAGCCCTATGCGCATACAGTTTCGAAATATGACAGC CTCTGGAGCGGCGCCCGGAGACCCCGTGCTAGACGAAGACGGATCTCTAC ACTCATCCGGGCTGAGGGAATTGCTCGAGGTCGTGCGGGGTAATGCCGCG CCCGTGGGCCGAGAAGACGTGGAAGATGGGTTATCGCAGCTTACACAAGG CGGGGAGTACGAGTGGATAGGCTTCTTGCAGTTCGAGCGGTGGTACAAAG AGTACTTCGGCAAGATCGACGCAAACCTGGAGAGAGAAGACACATAA
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Coding sequence (CDS) from alignment at H-elongata_contig77198:172..1518-

>mRNA_H-elongata_contig77198.15393.1 ID=mRNA_H-elongata_contig77198.15393.1|Name=mRNA_H-elongata_contig77198.15393.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2694bp|location=Sequence derived from alignment at H-elongata_contig77198:172..1518- (Himanthalia elongata Himel1 dioecious)
CAGCTCGGGAATGGAGAAACCAGCGCGTACGAATGCTCACCTGCTGAAAT
ATGTTTGGCGAAGCTGGAAACTCCACTCCAGGTGTCAGCGGGGGAAGAAC
ACTGCGTCGCCCTGGTGGACGTTGTGCGCCAGGATCGCCACCGAGATATC
GTCGCTTTCGCATGGGGCAACCCAGAAAATGGACGCCTTGGTACACAGCG
GGGACGAACACATGCAATGCCTTTGGAAGTCGAAGATCTAACCGAAGCGC
TTCGAAAATCTAAGCGCAAACCCACGAGTCTCTCGTGCGGCGGGAGTCAT
ACTTTGGCGGTCCTGAGCTCAGGGGAGGTGGCCGCGTGGGGTGGGGGGGG
GTACGGCCAGCTTGGCGACGGTCAAATGTGGGACAGACCGGAATCGGTGA
TGGTTGCCGGGCTGCAGGGAGTGCGATCTGCCAGCGCCGGGGCAAGGCAT
TCTATTGCTCTAGCAGTGGACCTCACTAGCACCCAGGTGTGGGGCTGGGG
TTTCAACCGCTGGGGAGAAGTTGGCGTCGGAGACGACTGCATTCGGCTGC
AGCCTCAGTGGGTAAGCGGCATGGATAGTTGCACCGTGCAACGCGTTGTC
GCGGGGGAGAGGCACACGATTGCCTTGACGGATGGAAAGGCCTTACGCGT
TAAAGATCTACCAGAATACCGAGAGTTCATCGACGCCTTTCGGAAGGGAG
GTCTCGTAGTGTATGACGCCCTCAAGAAAGCCATGGCCGAAAATAATATG
AATCCTGATTGGCTAGACACGCCTCTCGAGTACTTCCCTGGACAGCCGGG
GATGACTGAAGCGGAATGTCGCAAGGGAACGATAGGGCTCCACATGGATT
GGTGCCTCGACGCGGCGCCGCCGGGCAAGGATTTCTTCCTCAGGGGAGGA
CACGAGGTCGTATATTTCTGTCATCCCTGCCGGCGCGAGAGAATTTGCCT
TGCTTGTGCACGTAAGTGCCACTCCAAGCACTGCATCGAACCTACCTTTC
GCCTCAGAAGCGCGGCCGAACCGTGCGACTGTAGCACATCGCCAGGCGTA
TGCACTCGCATGTGGAGCCCTATGCGCATACAGTTTCGAAATATGACAGC
CTCTGGAGCGGCGCCCGGAGACCCCGTGCTAGACGAAGACGGATCTCTAC
ACTCATCCGGGCTGAGGGAATTGCTCGAGGTCGTGCGGGGTAATGCCGCG
CCCGTGGGCCGAGAAGACGTGGAAGATGGGTTATCGCAGCTTACACAAGG
CGGGGAGTACGAGTGGATAGGCTTCTTGCAGTTCGAGCGGTGGTACAAAG
AGTACTTCGGCAAGATCGACGCAAACCTGGAGAGAGAAGACACATAACAG
CTCGGGAATGGAGAAACCAGCGCGTACGAATGCTCACCTGCTGAAATATG
TTTGGCGAAGCTGGAAACTCCACTCCAGGTGTCAGCGGGGGAAGAACACT
GCGTCGCCCTGGTGGACGTTGTGCGCCAGGATCGCCACCGAGATATCGTC
GCTTTCGCATGGGGCAACCCAGAAAATGGACGCCTTGGTACACAGCGGGG
ACGAACACATGCAATGCCTTTGGAAGTCGAAGATCTAACCGAAGCGCTTC
GAAAATCTAAGCGCAAACCCACGAGTCTCTCGTGCGGCGGGAGTCATACT
TTGGCGGTCCTGAGCTCAGGGGAGGTGGCCGCGTGGGGTGGGGGGGGGTA
CGGCCAGCTTGGCGACGGTCAAATGTGGGACAGACCGGAATCGGTGATGG
TTGCCGGGCTGCAGGGAGTGCGATCTGCCAGCGCCGGGGCAAGGCATTCT
ATTGCTCTAGCAGTGGACCTCACTAGCACCCAGGTGTGGGGCTGGGGTTT
CAACCGCTGGGGAGAAGTTGGCGTCGGAGACGACTGCATTCGGCTGCAGC
CTCAGTGGGTAAGCGGCATGGATAGTTGCACCGTGCAACGCGTTGTCGCG
GGGGAGAGGCACACGATTGCCTTGACGGATGGAAAGGCCTTACGCGTTAA
AGATCTACCAGAATACCGAGAGTTCATCGACGCCTTTCGGAAGGGAGGTC
TCGTAGTGTATGACGCCCTCAAGAAAGCCATGGCCGAAAATAATATGAAT
CCTGATTGGCTAGACACGCCTCTCGAGTACTTCCCTGGACAGCCGGGGAT
GACTGAAGCGGAATGTCGCAAGGGAACGATAGGGCTCCACATGGATTGGT
GCCTCGACGCGGCGCCGCCGGGCAAGGATTTCTTCCTCAGGGGAGGACAC
GAGGTCGTATATTTCTGTCATCCCTGCCGGCGCGAGAGAATTTGCCTTGC
TTGTGCACGTAAGTGCCACTCCAAGCACTGCATCGAACCTACCTTTCGCC
TCAGAAGCGCGGCCGAACCGTGCGACTGTAGCACATCGCCAGGCGTATGC
ACTCGCATGTGGAGCCCTATGCGCATACAGTTTCGAAATATGACAGCCTC
TGGAGCGGCGCCCGGAGACCCCGTGCTAGACGAAGACGGATCTCTACACT
CATCCGGGCTGAGGGAATTGCTCGAGGTCGTGCGGGGTAATGCCGCGCCC
GTGGGCCGAGAAGACGTGGAAGATGGGTTATCGCAGCTTACACAAGGCGG
GGAGTACGAGTGGATAGGCTTCTTGCAGTTCGAGCGGTGGTACAAAGAGT
ACTTCGGCAAGATCGACGCAAACCTGGAGAGAGAAGACACATAA
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