mRNA_H-elongata_contig7717.15390.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig7717.15390.1 vs. uniprot
Match: D7FIT7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIT7_ECTSI) HSP 1 Score: 246 bits (629), Expect = 3.730e-80 Identity = 114/150 (76.00%), Postives = 128/150 (85.33%), Query Frame = 1
Query: 1 RMRSRLKLRTVVAIAPEGTMEDEAMFCRAQGAHLVSIRAELYRDEAVTVTCHQVAQVLSVLVDAHRLPALVHCPDGRVLTGVVVWCLRRLQCWEGHASVAEFTKFYGVLPSRDVEKFVDGFRDEIIVPENVPRWLWGGDRAHWHPTIRIR 450
R SRLKLRTVV+IAPEG MEDEAMFCR A LV +RAELYR+EAVTV+C QVAQVLS+L D RLPALVHCPDGRVL+GVV+WCLRRLQCW+ AS AEF +F GVLPSR+VEKFV+ + +E+ VP NVPRWLWGGDRAHWHP IRIR
Sbjct: 29 RFLSRLKLRTVVSIAPEGPMEDEAMFCREHSAQLVPVRAELYREEAVTVSCQQVAQVLSILADKDRLPALVHCPDGRVLSGVVLWCLRRLQCWDDRASAAEFARFSGVLPSREVEKFVESYGEEVTVPANVPRWLWGGDRAHWHPCIRIR 178
BLAST of mRNA_H-elongata_contig7717.15390.1 vs. uniprot
Match: A0A6H5JCL7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCL7_9PHAE) HSP 1 Score: 244 bits (624), Expect = 1.770e-79 Identity = 112/150 (74.67%), Postives = 127/150 (84.67%), Query Frame = 1
Query: 1 RMRSRLKLRTVVAIAPEGTMEDEAMFCRAQGAHLVSIRAELYRDEAVTVTCHQVAQVLSVLVDAHRLPALVHCPDGRVLTGVVVWCLRRLQCWEGHASVAEFTKFYGVLPSRDVEKFVDGFRDEIIVPENVPRWLWGGDRAHWHPTIRIR 450
R SRLKLRTVV+IAPEG MEDEAMFCR A LV +RAELYR+EAVTV+C QVAQVLS+L D RLPALVHCPDGRVL+G V+WCLRRLQCW+ AS AEF +F GVLPSR+VEKFV+ + +E+ +P NVPRWLWGGDRAHWHP IRIR
Sbjct: 29 RFLSRLKLRTVVSIAPEGPMEDEAMFCREHSAQLVPVRAELYREEAVTVSCQQVAQVLSILADKDRLPALVHCPDGRVLSGAVLWCLRRLQCWDDRASAAEFARFSGVLPSREVEKFVESYGEEVTIPANVPRWLWGGDRAHWHPCIRIR 178
BLAST of mRNA_H-elongata_contig7717.15390.1 vs. uniprot
Match: A0A836CAP9_9STRA (Tyrosine phosphatase family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAP9_9STRA) HSP 1 Score: 142 bits (358), Expect = 7.140e-38 Identity = 74/149 (49.66%), Postives = 97/149 (65.10%), Query Frame = 1
Query: 10 SRLKLRTVVAIAPEGTMEDEAMFCRAQGAHLVSIRAELYRDEAVTVTCHQVAQVLSVLVDAHRLPALVHCPDGRVLTGVVVWCLRRLQCWEGHASVAEFTKFY--GVLPSRDVEKFVDGFRDEIIVPENVPRWLWGGDRAHWHPTIRIR 450
+RLKL+T+VAI PE ++D FCR Q L+ + A+ Y++E +TVT QVAQ+LS LVD RLPALVHC DG +TG V+ CLR+LQ W A ++E ++ Y G R+V KFV F +E+ V VP WLW G R HP IR+R
Sbjct: 42 TRLKLKTMVAIVPEEPLKDLCDFCREQDIELLHVAADKYKEEGMTVTPQQVAQILSALVDPQRLPALVHCLDGGAVTGTVIMCLRKLQGWSW-AGLSEESRKYTAGRGMHREVNKFVQDFTEEVTVGAAVPPWLWQGQRERLHPAIRLR 189
BLAST of mRNA_H-elongata_contig7717.15390.1 vs. uniprot
Match: UPI000D1CD96B (probable tyrosine-protein phosphatase DG1060 isoform X1 n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=UPI000D1CD96B) HSP 1 Score: 120 bits (302), Expect = 1.300e-31 Identity = 61/155 (39.35%), Postives = 94/155 (60.65%), Query Frame = 1
Query: 1 RMRSRLKLRTVVAIAPEGTM-EDEAMFCRAQGAHLVSIRAELYRDEAVTVTCHQVAQVLSVLVDAHRLPALVHCPDGRVLTGVVVWCLRRLQCWEGHASVAEFTKFY--GVLPSRDVEKFVDGFRDEIIVPENVPRWLWGGDRAHWHPTIRIRWV 456
R RL L+T+V++ PE +D FC+ QG HL + ++D VT++ +QV ++L ++ LPA +HC DG +TG+VV CLR+LQCW S AEF +F G + SR+ +FV+ F+ I++P +P+WLW G R HP R+ ++
Sbjct: 36 RFLKRLHLKTIVSLTPEAQPNKDLRSFCQDQGIHLQHFHVDKFQD-VVTLSHNQVVEILHKIISVENLPAYLHCLDGAHVTGLVVMCLRKLQCWNLSTSTAEFCRFQRTGEI-SREESQFVESFQGSILIPPRIPQWLWQGVRTVNHPIFRLTYL 188
BLAST of mRNA_H-elongata_contig7717.15390.1 vs. uniprot
Match: D8SYV9_SELML (Uncharacterized protein n=4 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8SYV9_SELML) HSP 1 Score: 120 bits (301), Expect = 9.720e-29 Identity = 61/155 (39.35%), Postives = 94/155 (60.65%), Query Frame = 1
Query: 1 RMRSRLKLRTVVAIAPEGTM-EDEAMFCRAQGAHLVSIRAELYRDEAVTVTCHQVAQVLSVLVDAHRLPALVHCPDGRVLTGVVVWCLRRLQCWEGHASVAEFTKFY--GVLPSRDVEKFVDGFRDEIIVPENVPRWLWGGDRAHWHPTIRIRWV 456
R RL L+T+V++ PE +D FC+ QG HL + ++D VT++ +QV ++L ++ LPA +HC DG +TG+VV CLR+LQCW S AEF +F G + SR+ +FV+ F+ I++P +P+WLW G R HP R+ ++
Sbjct: 615 RFLKRLHLKTIVSLTPEAQPNKDLRSFCQDQGIHLQHFHVDKFQD-VVTLSHNQVVEILHRIISVENLPAYLHCLDGAHVTGLVVMCLRKLQCWNLSTSTAEFCRFQRTGEI-SREESQFVESFQGSILIPPRIPQWLWQGVRTVNHPIFRLTYL 767
BLAST of mRNA_H-elongata_contig7717.15390.1 vs. uniprot
Match: A0A2D4CE66_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CE66_PYTIN) HSP 1 Score: 112 bits (280), Expect = 1.430e-27 Identity = 55/148 (37.16%), Postives = 90/148 (60.81%), Query Frame = 1
Query: 13 RLKLRTVVAIAPEGTMEDEAMFCRAQGAHLVSIRAELYRDEAVTVTCHQVAQVLSVLVDAHRLPALVHCPDGRVLTGVVVWCLRRLQCWEGHASVAEFTKF---YGVLPSRDVEKFVDGFRDEIIVPENVPRWLWGGDRAHWHPTIRI 447
RL+L+T+V++ PE D FC+ + AE + + VTV+ VAQ+L +L++ LP +HC DG +TG+++ LR+LQ W A+++EF +F +G+ +D +++ F +EI+VP +VP+WLW G R HPT+ I
Sbjct: 37 RLQLKTIVSVIPEAPTSDLVEFCQQEKIANHHFYAEKFTSDNVTVSPATVAQILXLLINQENLPLYIHCLDGANVTGIIIMILRKLQNWTKVATISEFCRFTRDHGI--EKDESEYLSTFSEEIVVPTDVPKWLWNGIRILKHPTMII 182
BLAST of mRNA_H-elongata_contig7717.15390.1 vs. uniprot
Match: A0A8K1FLW5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FLW5_PYTOL) HSP 1 Score: 112 bits (279), Expect = 1.920e-27 Identity = 55/148 (37.16%), Postives = 88/148 (59.46%), Query Frame = 1
Query: 13 RLKLRTVVAIAPEGTMEDEAMFCRAQGAHLVSIRAELYRDEAVTVTCHQVAQVLSVLVDAHRLPALVHCPDGRVLTGVVVWCLRRLQCWEGHASVAEFTKF---YGVLPSRDVEKFVDGFRDEIIVPENVPRWLWGGDRAHWHPTIRI 447
RL+L+T+V++ PE D FC+ + AE + + VTV+ VAQ+L +++ LP +HC DG + G+++ LR+LQ W A+V+EF +F +G+ +D +++ F +EI+VP +VPRWLW G R HPT+ I
Sbjct: 37 RLQLKTIVSVIPEPPTADLVEFCQQEKITNYHFCAEKFTSDNVTVSPSMVAQILQLMIKQENLPLYIHCLDGANVAGIIIMVLRKLQNWTKVATVSEFCRFTRDHGI--EKDESEYLSSFSEEIVVPADVPRWLWNGIRITKHPTMII 182
BLAST of mRNA_H-elongata_contig7717.15390.1 vs. uniprot
Match: A0A507C2X4_9FUNG (Uncharacterized protein n=1 Tax=Synchytrium microbalum TaxID=1806994 RepID=A0A507C2X4_9FUNG) HSP 1 Score: 104 bits (260), Expect = 1.180e-24 Identity = 52/149 (34.90%), Postives = 91/149 (61.07%), Query Frame = 1
Query: 13 RLKLRTVVAIAPEGTMEDEAMFCRAQGAHLVSIRAELYRDEAVTVTCHQVAQVLSVLVDAHRLPALVHCPDGRVLTGVVVWCLRRLQCWEGHASVAEFTKFY--GVLPSRDVEKFVDGFRDEIIVPENVPRWLWGGDRA-HWHPTIRIR 450
RL L+T++++ P+ F LV IR + +D +V +T +V +L+ ++D + LP +HC DG ++TGVV+ CLR+LQCW ++ EFT+F GV+ S + E F++ F+ E + +++P+WLW G+ HP++++R
Sbjct: 34 RLHLKTILSLTPQPPPVSMYQFASQNTIQLVHIRVDKPKD-SVPLTYAKVGALLNTIIDPNNLPMFIHCLDGVIVTGVVIMCLRKLQCWNVPSATIEFTRFVKEGVIGSDEAE-FIEKFQYEFEIGKSLPKWLWNGNPTFRKHPSLKVR 180
BLAST of mRNA_H-elongata_contig7717.15390.1 vs. uniprot
Match: A0A0L0HKS9_SPIPD (Uncharacterized protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HKS9_SPIPD) HSP 1 Score: 105 bits (262), Expect = 4.880e-24 Identity = 54/149 (36.24%), Postives = 88/149 (59.06%), Query Frame = 1
Query: 13 RLKLRTVVAIAPEGTMEDEAMFCRAQGAHLVSIRAELYRDEAVTVTCHQVAQVLSVLVDAHRLPALVHCPDGRVLTGVVVWCLRRLQCWEGHASVAEFTKFY--GVLPSRDVEKFVDGFRDEIIVPENVPRWLWGGDRAHW-HPTIRIR 450
RL+L ++++ PE D + FC A + +R + + E V ++ + +Q+L++L D P VHC DG +TG V+ CLR+LQCW + + E T+++ GV+ S + E FV+ F +I VP +P+WLWGG HPT+R++
Sbjct: 36 RLRLTAILSLTPEPPNADLSAFCVANNITSIHVRVDKPK-EHVPLSFQKTSQILAILADPSNHPLFVHCLDGAGVTGAVIMCLRKLQCWTMASILVESTRYHKEGVIGSEEAE-FVEKFNADIEVPPRLPKWLWGGHLTFKKHPTLRLK 182
BLAST of mRNA_H-elongata_contig7717.15390.1 vs. uniprot
Match: A0A507DR80_9FUNG (Uncharacterized protein n=1 Tax=Synchytrium endobioticum TaxID=286115 RepID=A0A507DR80_9FUNG) HSP 1 Score: 101 bits (252), Expect = 1.930e-23 Identity = 52/149 (34.90%), Postives = 87/149 (58.39%), Query Frame = 1
Query: 13 RLKLRTVVAIAPEGTMEDEAMFCRAQGAHLVSIRAELYRDEAVTVTCHQVAQVLSVLVDAHRLPALVHCPDGRVLTGVVVWCLRRLQCWEGHASVAEFTKFY--GVLPSRDVEKFVDGFRDEIIVPENVPRWLWGGDRA-HWHPTIRIR 450
RL RT+V++ P+ F LV I+ + + +V +T +V +L+ ++D + LP +HC DG ++TGVV+ CLR+LQCW ++ E+T+F GV+ S + E FVD F+ + + ++P+WLW G HP++R+R
Sbjct: 34 RLNARTIVSLTPQPPPSSMHQFALRNNIQLVHIKVDKPKG-SVPLTYAKVGTLLNTVIDPNNLPLFIHCLDGVIVTGVVIMCLRKLQCWSIPSATIEYTRFIREGVIGSDEAE-FVDKFQYDFEIGRSLPKWLWNGHPTFRKHPSLRVR 180 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig7717.15390.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig7717.15390.1 >prot_H-elongata_contig7717.15390.1 ID=prot_H-elongata_contig7717.15390.1|Name=mRNA_H-elongata_contig7717.15390.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=151bp MRSRLKLRTVVAIAPEGTMEDEAMFCRAQGAHLVSIRAELYRDEAVTVTCback to top mRNA from alignment at H-elongata_contig7717:5159..6299- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig7717.15390.1 ID=mRNA_H-elongata_contig7717.15390.1|Name=mRNA_H-elongata_contig7717.15390.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1141bp|location=Sequence derived from alignment at H-elongata_contig7717:5159..6299- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig7717:5159..6299- >mRNA_H-elongata_contig7717.15390.1 ID=mRNA_H-elongata_contig7717.15390.1|Name=mRNA_H-elongata_contig7717.15390.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=906bp|location=Sequence derived from alignment at H-elongata_contig7717:5159..6299- (Himanthalia elongata Himel1 dioecious)back to top |