mRNA_H-elongata_contig77148.15389.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig77148.15389.1
Unique NamemRNA_H-elongata_contig77148.15389.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig77148.15389.1 vs. uniprot
Match: D7G2K7_ECTSI (Glutathione S-transferase kappa n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2K7_ECTSI)

HSP 1 Score: 235 bits (600), Expect = 9.130e-72
Identity = 115/180 (63.89%), Postives = 137/180 (76.11%), Query Frame = 1
Query:    1 KKLSNTPPGTLKAKRLYMKEDLARMAKYHGVPIVPPKDPRAMFDTLGAQRLLTAAAMDHPQSLERLTRELWRRIWGGGGEIVSAQGLGEACSRAGLAADATQFILSRAGEAEVKACLKETTDEALDRGAFGAPWTTIRV------DDGTWEAFFGCDRFEVLAEALGKPWLGPHPPLSKL 522
            K   N PP TLKAK  YMK DLARMAKYHG P+VP KDPRAMF+TL AQRLL AAA+D P+ LE LTRELW R+WGGGG+I S QGL EAC   G+ A + + +L+R+G+A++KA LKE T+ AL RGAFGAPW ++R       D   WEAFFGCDRF+VLA+A+G+PW GPHP LSKL
Sbjct:   66 KATGNKPPATLKAKGKYMKGDLARMAKYHGAPLVPLKDPRAMFETLAAQRLLNAAAVDAPEQLEGLTRELWTRLWGGGGDIASEQGLQEACMGTGMDASSARSLLARSGDADIKARLKEETEVALRRGAFGAPWISLRTCADDDDDRKPWEAFFGCDRFDVLAQAMGQPWFGPHPSLSKL 245          
BLAST of mRNA_H-elongata_contig77148.15389.1 vs. uniprot
Match: A0A835YPJ2_9STRA (Glutathione S-transferase kappa n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPJ2_9STRA)

HSP 1 Score: 154 bits (390), Expect = 1.080e-40
Identity = 81/171 (47.37%), Postives = 105/171 (61.40%), Query Frame = 1
Query:    1 KKLSNTPPGTLKAKRLYMKEDLARMAKYHGVPIVPPKDPRAMFDTLGAQRLLTAAAMDHPQSLERLTRELWRRIWGGGGEIVSAQGLGEACSRAGLAADATQFILSRAGEAEVKACLKETTDEALDRGAFGAPWTTIRVDDGTWEA--FFGCDRFEVLAEALGKPWLGPHP 507
            K   N PPG L AKR+YM+EDLAR AK+  VP+   KD + ++ +L AQRLLTA ++D P  L  L+R LW RIW    +I   + L  AC+ AG        +L R+ E +VK  L+  T  A+DRGAFGAP   + +  G  E   FFGCDRF+ LA A+G+PWLGP P
Sbjct:   49 KATGNAPPGALPAKRVYMREDLARCAKHFNVPLNYIKDGKVLYTSLAAQRLLTAVSLDEPALLRPLSRALWLRIWSANTDIAQQESLAAACAAAGATPRDAAALLLRSTEPDVKERLRAVTQVAIDRGAFGAPTLIVTLPGGPPEGDLFFGCDRFDQLAAAIGQPWLGPDP 219          
BLAST of mRNA_H-elongata_contig77148.15389.1 vs. uniprot
Match: A0A2B4RC69_STYPI (Glutathione S-transferase kappa 1 n=3 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4RC69_STYPI)

HSP 1 Score: 148 bits (374), Expect = 3.740e-39
Identity = 77/166 (46.39%), Postives = 102/166 (61.45%), Query Frame = 1
Query:   13 NTPPGTLKAKRLYMKEDLARMAKYHGVPIVPPKDPRAMFDTLGA---QRLLTAAAMDHPQSLERLTRELWRRIWGGGGEIVSAQGLGEACSRAGLAADATQFILSRAGEAEVKACLKETTDEALDRGAFGAPWTTIRVDDGTWEAFFGCDRFEVLAEALGKPWLGP 501
            N PP  + AK +YM +D+ R+ +++G+PI PP DP  +  T G+    RLLTAA   HP+ LE L+RE W R W    +IV  Q   E C++ GL+AD TQ ++S+  + E+K  LKETT +ALD GAFGAP     V+ G    FFG DRF +LA  LG  W GP
Sbjct:    6 NRPPAMVPAKGVYMMKDIQRLREFYGIPITPPSDPANVMFTKGSLPTMRLLTAACKYHPEKLEELSREFWMRAWSRDEDIVEPQSFQEVCTKVGLSADDTQALISKTKDQEIKDTLKETTQKALDLGAFGAPLIVAHVN-GEPHTFFGSDRFLLLAHLLGVEWQGP 170          
BLAST of mRNA_H-elongata_contig77148.15389.1 vs. uniprot
Match: UPI0009E4A5BA (glutathione S-transferase kappa 1-like isoform X1 n=2 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E4A5BA)

HSP 1 Score: 142 bits (358), Expect = 3.100e-36
Identity = 78/171 (45.61%), Postives = 102/171 (59.65%), Query Frame = 1
Query:   13 NTPPGTLKAKRLYMKEDLARMAKYHGVPIVPPKDPR-AMF--DTLGAQRLLTAAAMDHPQSLERLTRELWRRIWGGGGEIVSAQGLGEACSRAGLAADATQFILSRAGEAEVKACLKETTDEALDRGAFGAPWTTIRVDDGTWEAFFGCDRFEVLAEALGKPWLGPHPPLS 516
            N PPGT+ AK  YM +D+ R+  ++G+P+VPP DP   MF   +L A RL+TAA   +P  +E L+RE W RIW    +I   Q L E C   GL    TQ ++S+ G+ E+K  LKETT +ALD GAFGAP     V+ G    +FG DRF +LA  LG  W GP  P +
Sbjct:   53 NKPPGTVPAKAAYMSKDIERLRDFYGIPLVPPADPADVMFRKGSLSAMRLVTAATKYYPDKVEPLSREFWMRIWSRDEDITEPQSLLEVCQNIGLTEHQTQSLVSKIGDQEIKDKLKETTQKALDMGAFGAPIIVAHVN-GKPHMYFGSDRFLLLANLLGVEWEGPLVPRN 222          
BLAST of mRNA_H-elongata_contig77148.15389.1 vs. uniprot
Match: A0A8C2UQQ2_CHILA (Glutathione S-transferase kappa n=1 Tax=Chinchilla lanigera TaxID=34839 RepID=A0A8C2UQQ2_CHILA)

HSP 1 Score: 137 bits (344), Expect = 3.370e-34
Identity = 75/169 (44.38%), Postives = 101/169 (59.76%), Query Frame = 1
Query:   13 NTPPGTLKAKRLYMKEDLARMAKYHGVPIVPPKDPRAMF---DTLGAQRLLTAAAMDHPQSLERLTRELWRRIWGGGGEIVSAQGLGEACSRAGLAADATQFILSRAGEAEVKACLKETTDEALDRGAFGAPWTTIRVDDGTWEAFFGCDRFEVLAEALGKPWLGPHPP 510
            N PP  L  K  YM  DL  + ++  VP+  PKD  ++     +L A R LTA  M+HP+SLE+++RELW R+W    +IV  Q +  A  +AGL+A+  Q +L ++  A+VK  LKETT+EA   GAFG P T   VD G     FG DR E+LA  LG+ W+GP PP
Sbjct:   53 NKPPAVLPRKAQYMTNDLKHLKQHFQVPLSFPKDFNSVILEKGSLSAMRFLTAVNMEHPESLEQVSRELWMRVWSRDEDIVEPQSILAAAQKAGLSAEKAQDLLEKSSMAQVKNQLKETTEEACKYGAFGLPITVAHVD-GQTHMLFGSDRMELLAHLLGEKWMGPVPP 220          
BLAST of mRNA_H-elongata_contig77148.15389.1 vs. uniprot
Match: G5C2L7_HETGA (Glutathione S-transferase kappa n=3 Tax=Heterocephalus glaber TaxID=10181 RepID=G5C2L7_HETGA)

HSP 1 Score: 135 bits (340), Expect = 1.270e-33
Identity = 75/169 (44.38%), Postives = 102/169 (60.36%), Query Frame = 1
Query:   13 NTPPGTLKAKRLYMKEDLARMAKYHGVPIVPPKDPRAMF---DTLGAQRLLTAAAMDHPQSLERLTRELWRRIWGGGGEIVSAQGLGEACSRAGLAADATQFILSRAGEAEVKACLKETTDEALDRGAFGAPWTTIRVDDGTWEAFFGCDRFEVLAEALGKPWLGPHPP 510
            N PP  +  K  YM  DL R+ ++  VP+  PKD  +      +L A R LTA  M+HP+SLE+++RELW RIW    +IV +Q +  A  +AGL+A+  Q +L ++  A+VK  LKETT+ A   GAFG P T + VD  T    FG DR E+LA  LG+ W+GP PP
Sbjct:   53 NKPPAMVPRKAQYMANDLRRLKEHFQVPLRFPKDFNSAVLEKGSLSAMRFLTAVNMEHPESLEKVSRELWMRIWSQDEDIVESQSILAAAQKAGLSAEKAQGLLEKSSTAQVKNQLKETTEAACKYGAFGLPITVVHVDRQT-HMLFGSDRMELLAYLLGEKWMGPVPP 220          
BLAST of mRNA_H-elongata_contig77148.15389.1 vs. uniprot
Match: A0A091CWD0_FUKDA (Glutathione S-transferase kappa n=2 Tax=Fukomys damarensis TaxID=885580 RepID=A0A091CWD0_FUKDA)

HSP 1 Score: 135 bits (339), Expect = 1.770e-33
Identity = 75/169 (44.38%), Postives = 102/169 (60.36%), Query Frame = 1
Query:   13 NTPPGTLKAKRLYMKEDLARMAKYHGVPIVPPKDPRAMF---DTLGAQRLLTAAAMDHPQSLERLTRELWRRIWGGGGEIVSAQGLGEACSRAGLAADATQFILSRAGEAEVKACLKETTDEALDRGAFGAPWTTIRVDDGTWEAFFGCDRFEVLAEALGKPWLGPHPP 510
            N PP  +  K  YM  DL R+ ++  VP+  PKD  ++     +L A + LTA  M+HP+SLE+++RELW RIW    +IV +Q +  A  +AGL+A+  Q +L +   A+VK  LKETT+ A   GAFG P T   VDD T    FG DR E+LA  LG+ W+GP PP
Sbjct:   53 NKPPVVVPRKAQYMINDLGRLKQHFQVPLRFPKDFNSVVFKKGSLSAMQFLTAVNMEHPESLEKVSRELWMRIWSRDEDIVESQSILAAAQKAGLSAEKAQSLLEKISTAQVKNQLKETTEAACRYGAFGLPITVAHVDDQT-HMLFGSDRMELLAHLLGEKWMGPVPP 220          
BLAST of mRNA_H-elongata_contig77148.15389.1 vs. uniprot
Match: A0A8J6FC89_ELECQ (Glutathione S-transferase kappa n=1 Tax=Eleutherodactylus coqui TaxID=57060 RepID=A0A8J6FC89_ELECQ)

HSP 1 Score: 134 bits (336), Expect = 4.420e-33
Identity = 74/176 (42.05%), Postives = 104/176 (59.09%), Query Frame = 1
Query:   13 NTPPGTLKAKRLYMKEDLARMAKYHGVPIVPPKDPRAMFDT------LGAQRLLTAAAMDHPQSLERLTRELWRRIWGGGGEIVSAQGLGEACSRAGLAADATQFILSRAGEAEVKACLKETTDEALDRGAFGAPWTTIRVDDGTWEAFFGCDRFEVLAEALGKPWLGPHPPLSKL 522
            NTPP  +  K  YM  DL R+++++ VP+  P D    F++      L A R LTA  M HP+ LE ++RELW RIW    +I   + + +A  +AG++ D  + +LS     EVK  LKETTD+A++ GAFG P     +++   E FFG DRFE+LA  LG+ WLGP P  S+L
Sbjct:   52 NTPPAMVPRKGAYMSRDLERLSEFYEVPLRNPSD---FFNSIIKKGSLSAMRFLTAVQMSHPEFLEEVSRELWVRIWSEDKDITEPESILQAAKKAGMSEDMAKKLLSAISLPEVKNKLKETTDKAVEYGAFGMPSIVAHINERP-ELFFGSDRFELLAHQLGEKWLGPMPQKSRL 223          
BLAST of mRNA_H-elongata_contig77148.15389.1 vs. uniprot
Match: A0A6P3W073_CLUHA (Glutathione S-transferase kappa n=1 Tax=Clupea harengus TaxID=7950 RepID=A0A6P3W073_CLUHA)

HSP 1 Score: 133 bits (335), Expect = 7.040e-33
Identity = 79/177 (44.63%), Postives = 105/177 (59.32%), Query Frame = 1
Query:   13 NTPPGTLKAKRLYMKEDLARMAKYHGVPIVPPKDP-RAMFD--TLGAQRLLTAAA--MDHPQSLERLTRELWRRIWGGGGEIVSAQGLGEACSRAGLAADATQFILSRAGEAEVKACLKETTDEALDRGAFGAPWTTIRVDDGTWEAFFGCDRFEVLAEALGKPWLGPHP--PLSKL 522
            N PPG +  K LYM +DL R+A+Y  VP+  P DP  AMF+  +L A R +TA     D    +E+++RELW+RIW    +I     L EA  +AGL+A   + +L  A    +K  LK TT EAL+ GAFG P     VD G  EAFFG DRFE+LA  +G+ W+GP P  P +K+
Sbjct:   53 NKPPGLVPNKFLYMTKDLGRLAQYFSVPLSSPSDPFEAMFEKGSLAAMRFVTAVEEKTDGDAKVEKVSRELWKRIWSKDQDITQPASLTEAGLKAGLSASEVEELLKLAQSKPIKDKLKNTTQEALEYGAFGFPLIVCHVD-GKPEAFFGSDRFELLAHCIGEKWVGPQPNTPAAKM 228          
BLAST of mRNA_H-elongata_contig77148.15389.1 vs. uniprot
Match: UPI0010FCAA42 (glutathione S-transferase kappa 1-like n=2 Tax=Acropora TaxID=6127 RepID=UPI0010FCAA42)

HSP 1 Score: 133 bits (334), Expect = 1.180e-32
Identity = 76/171 (44.44%), Postives = 102/171 (59.65%), Query Frame = 1
Query:   13 NTPPGTLKAKRLYMKEDLARMAKYHGVPIVPPKDPR-AMF--DTLGAQRLLTAAAMDHPQSLERLTRELWRRIWGGGGEIVSAQGLGEACSRAGLAADATQFILSRAGEAEVKACLKETTDEALDRGAFGAPWTTIRVDDGTWEAFFGCDRFEVLAEALGKPWLGPHPPLS 516
            N PPG + +K  YM +D+ R+  ++G+PI  P D   AMF   ++ AQRLLT    DHP+ +E L+RELW RIW    +I   + L EAC + GL  D ++ +LS+  E  +K  LKETT  ALD GAFGAP T +   +G  + FFG DRF ++A   G  W GP  P S
Sbjct:   64 NKPPGVVPSKLAYMGKDIKRLRDFYGIPIKAPSDVADAMFVKGSMPAQRLLTVVNNDHPEKVEELSRELWMRIWSRDEDITEHESLQEACRKVGLG-DQSEVLLSKIKEQTIKDQLKETTQRALDFGAFGAP-TIVAHINGEPQMFFGSDRFLLMAHMFGVEWEGPLRPSS 232          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig77148.15389.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2K7_ECTSI9.130e-7263.89Glutathione S-transferase kappa n=2 Tax=Ectocarpus... [more]
A0A835YPJ2_9STRA1.080e-4047.37Glutathione S-transferase kappa n=1 Tax=Tribonema ... [more]
A0A2B4RC69_STYPI3.740e-3946.39Glutathione S-transferase kappa 1 n=3 Tax=Stylopho... [more]
UPI0009E4A5BA3.100e-3645.61glutathione S-transferase kappa 1-like isoform X1 ... [more]
A0A8C2UQQ2_CHILA3.370e-3444.38Glutathione S-transferase kappa n=1 Tax=Chinchilla... [more]
G5C2L7_HETGA1.270e-3344.38Glutathione S-transferase kappa n=3 Tax=Heteroceph... [more]
A0A091CWD0_FUKDA1.770e-3344.38Glutathione S-transferase kappa n=2 Tax=Fukomys da... [more]
A0A8J6FC89_ELECQ4.420e-3342.05Glutathione S-transferase kappa n=1 Tax=Eleutherod... [more]
A0A6P3W073_CLUHA7.040e-3344.63Glutathione S-transferase kappa n=1 Tax=Clupea har... [more]
UPI0010FCAA421.180e-3244.44glutathione S-transferase kappa 1-like n=2 Tax=Acr... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig77148contigH-elongata_contig77148:77..2625 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeMammalia
Seed ortholog score127.1
Seed ortholog evalue7.3e-27
Seed eggNOG ortholog34839.XP_005405422.1
Preferred nameGSTK1
KEGG rclassRC00004,RC00069,RC00840,RC00948,RC01704,RC01705,RC01706,RC01758,RC01759,RC01765,RC01767,RC01769,RC02243,RC02527,RC02939,RC02940,RC02942,RC02943,RC02944
KEGG koko:K13299
KEGG ReactionR03522,R07002,R07003,R07004,R07023,R07024,R07025,R07026,R07069,R07070,R07083,R07084,R07091,R07092,R07093,R07094,R07100,R07113,R07116,R08280,R09409
KEGG Pathwayko00480,ko00980,ko00982,ko04146,ko05204,map00480,map00980,map00982,map04146,map05204
GOsGO:0003674,GO:0003824,GO:0004364,GO:0004601,GO:0004602,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0005777,GO:0005782,GO:0005829,GO:0006518,GO:0006575,GO:0006605,GO:0006625,GO:0006749,GO:0006790,GO:0006807,GO:0006810,GO:0006886,GO:0006996,GO:0007031,GO:0008104,GO:0008150,GO:0008152,GO:0009058,GO:0009636,GO:0009888,GO:0009987,GO:0015031,GO:0015833,GO:0016043,GO:0016209,GO:0016491,GO:0016684,GO:0016740,GO:0016765,GO:0030154,GO:0030855,GO:0031907,GO:0031974,GO:0032502,GO:0033036,GO:0033365,GO:0034613,GO:0034641,GO:0042221,GO:0042579,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043574,GO:0043603,GO:0044237,GO:0044249,GO:0044272,GO:0044422,GO:0044424,GO:0044429,GO:0044438,GO:0044439,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0046907,GO:0048856,GO:0048869,GO:0050896,GO:0051179,GO:0051186,GO:0051234,GO:0051641,GO:0051649,GO:0051716,GO:0055114,GO:0060429,GO:0070013,GO:0070727,GO:0070887,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0072594,GO:0072662,GO:0072663,GO:0097237,GO:0098754,GO:0098869,GO:1901564,GO:1901566,GO:1901576,GO:1901685,GO:1901687,GO:1990748
EggNOG free text desc.Glutathione S-transferase kappa
EggNOG OGs2R0HS@2759,35CI4@314146,38GKE@33154,3BAAT@33208,3D26Q@33213,3J6EF@40674,489IY@7711,48YQ5@7742,4PZK9@9989,COG3917@1
EC2.5.1.18
COG Functional cat.H
Best tax levelRodentia
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionGlutathione S-transferase
Ec32 orthologEc-11_002590.1
Exons4
Model size1326
Cds size474
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig77148.15389.1prot_H-elongata_contig77148.15389.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig77148 128..1824 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931176.2905378-UTR-H-elongata_contig77148:76..1271622931176.2905378-UTR-H-elongata_contig77148:76..127Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig77148 77..127 +
1691679729.5514896-UTR-H-elongata_contig77148:76..1271691679729.5514896-UTR-H-elongata_contig77148:76..127Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig77148 77..127 +
1622931176.3914828-UTR-H-elongata_contig77148:1824..26251622931176.3914828-UTR-H-elongata_contig77148:1824..2625Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig77148 1825..2625 +
1691679729.6159146-UTR-H-elongata_contig77148:1824..26251691679729.6159146-UTR-H-elongata_contig77148:1824..2625Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig77148 1825..2625 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931176.311605-CDS-H-elongata_contig77148:127..2251622931176.311605-CDS-H-elongata_contig77148:127..225Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig77148 128..225 +
1691679729.565343-CDS-H-elongata_contig77148:127..2251691679729.565343-CDS-H-elongata_contig77148:127..225Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig77148 128..225 +
1622931176.3306606-CDS-H-elongata_contig77148:721..8271622931176.3306606-CDS-H-elongata_contig77148:721..827Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig77148 722..827 +
1691679729.5751243-CDS-H-elongata_contig77148:721..8271691679729.5751243-CDS-H-elongata_contig77148:721..827Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig77148 722..827 +
1622931176.3587663-CDS-H-elongata_contig77148:1199..13241622931176.3587663-CDS-H-elongata_contig77148:1199..1324Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig77148 1200..1324 +
1691679729.5849807-CDS-H-elongata_contig77148:1199..13241691679729.5849807-CDS-H-elongata_contig77148:1199..1324Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig77148 1200..1324 +
1622931176.3770416-CDS-H-elongata_contig77148:1679..18241622931176.3770416-CDS-H-elongata_contig77148:1679..1824Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig77148 1680..1824 +
1691679729.6071491-CDS-H-elongata_contig77148:1679..18241691679729.6071491-CDS-H-elongata_contig77148:1679..1824Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig77148 1680..1824 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig77148.15389.1

>prot_H-elongata_contig77148.15389.1 ID=prot_H-elongata_contig77148.15389.1|Name=mRNA_H-elongata_contig77148.15389.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=158bp
MKEDLARMAKYHGVPIVPPKDPRAMFDTLGAQRLLTAAAMDHPQSLERLT
RELWRRIWGGGGEIVSAQGLGEACSRAGLAADATQFILSRAGEAEVKACL
KETTDEALDRGAFGAPWTTIRVDDGTWEAFFGCDRFEVLAEALGKPWLGP
HPPLSKL*
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mRNA from alignment at H-elongata_contig77148:77..2625+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig77148.15389.1 ID=mRNA_H-elongata_contig77148.15389.1|Name=mRNA_H-elongata_contig77148.15389.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2549bp|location=Sequence derived from alignment at H-elongata_contig77148:77..2625+ (Himanthalia elongata Himel1 dioecious)
AAAAAACTCAGCAACACGCCGCCGGGGACACTCAAGGCAAAGAGATTGTA CATGAAGGAGGACCTGGCTCGAATGGCGAAATACCACGGCGTCCCGATCG TGCCACCTAAGGATCCTCGCGCTATGTTTGACACGCTTGGCGCCCAAAGG TGATAAATATATATGTACATACTGTACATATATATATATATAGGTGTATA TAGTCATATGCACACCCTTACCGCGGTAGAGTACACTTCGGTCGAGACTC TCTCCGCACCTTCGACATGGATGTACACCCTGTGGCTGTACTCGTTCGAA CGAATTATGCATTGTGTCATGGTGTCGATTGGATCCTTACCTGGTGATAT CTGCCCGAACCCGCAATGGTTGTGCCGGATCTTGTAGCAGATAGATAACT TCTGTAATAGATAATGGAGATAAATAGATACACCTTACCGCGGTACGCGA ATAACCGAGAGCTCTGCATCCTCTAGCAAATATAGTTTTTTCTTCTATAG TAGAGTACTGTACCCTTTGCACCCTTATTGCACCCTTAAAAAAGGTAACC AGGTAGGGGTAAGGATTGTATGCTCTTGCCGCCTTGCCTACCGCAGGCAG GCGGAGTTCGATAGAAACATCTTCGTTGTCCTGTCCTGCCGGCAGACTGC TCACCGCCGCCGCCATGGACCATCCCCAGTCTCTGGAGAGGCTGACCCGA GAGCTCTGGAGGCGAATCTGGGGTGGCGGGGGGGAAATCGTCTCAGCGCA GGTGATTGGCCGTCGTGCCGCGGGTGCCGATCTGACCGTGCGCGGCTCCA AAGGCGAGACACAATACACGAAGCAAGGAGAACTCTGCGTGCACGCATCC CGCGCTCCCTCGTGAGGGTGTACCGCCTCCTCGTTTACTAGCCCCAGTGT GCTGTTTGGTACTGGTACCCCTGTCACCCCTGTATAGCATAGCCACGTGT CACCAGGATGGGCGGAGAAACGTGGGACTCCGAACAGGGTGAACTATCCC CCCCCCTTTTTTGCGCTTTTATTTTTTTGTTTTTACCCATTCGTTTGTTG CAATCCGTTCGTTATAATATGTTAAACTCCCTCGTTACTCGTATCCTACC ATCGACACCGGGACGCCGTCCAGGGCCTGGGGGAGGCGTGCTCGAGAGCG GGGCTAGCTGCGGACGCGACTCAGTTTATCTTGTCAAGGGCTGGGGAGGC GGAGGTGAAAGCGTGCCTCAAGGAAACCACGGACGAGGCTCTCGACAGGT GCGGCTACCTTTTTTTGCTGTCCTTGTCATCTAGGCTATGTTCGAAAGTT TTCTTATCCCTAAAGCTATATACTCTAATACTAAATAGCTATACGCGAGA TGAGGGGCGGGGAGTAGGGGGCGAGCAATCAATTTTCCGTGCCCCGGTCG GGTAAGGAATACTTCGAAGCACATTTTTGAACGCGTAAAGCTTCGGCAAA AAGCCTTGAAACCCATCGCGCCAGGTTGCGAAGGCGAACACTGTTTGCAT GCACATCACCGATAGCACCGGCGCGATGTGCTCTGATATTTTCCTTATTT TCTTGTCTTAACTGCATTGCGTGCGCGTATACACACATACATACAAATAC CAGGGGAGCTTTTGGCGCTCCTTGGACTACGATCCGCGTCGACGACGGGA CTTGGGAGGCATTTTTCGGGTGCGATCGTTTCGAGGTGCTCGCCGAGGCC CTGGGGAAGCCGTGGCTGGGTCCCCACCCGCCGCTGTCAAAGCTGTGAAG GAGGCGAGATCCAAGGCAACGAGCCGTGACACCGCTTTGATGGCCGCGTC GTCGAATTTTTTCGGGCGGGTCGGTTCTTTTAGAATCCTTTTTGGCAGCC GTTGTCTAATCACACAATCTACCTAGACTTCGTTGATCAAATATATCTAG ACTCCCACTTTTGATGACCCCATAAGATGTTTGCCTGTTGGTTAATGTAC ACGGCGAGAGTTACGTGTAGGGCGTTTTCTGTCGAAGATGATGTTGTTGT TGCCCACCCCCGCCCTCGGTATTTGTTACCCAGGCAATTCAGGCGTGTCT AGGTCTAAGCTTCCTCACACTATCGTCCCATGGATATGACTAGAAAATGT GTAATATTTATTATCATATTTTTTTTCACACCAATGGCAACTAACTGTAA AGGACGGGTATGATGGTAATACTATTATTTCGAGACAAATATATCCCGGC TTAAACGTTTATTTTTTGTTCGTCAAACAGTGTTCCCTAGCTATGCTGGC GTCACTACACTAACTTAGCATTTTACCCGTTGTCAAGTAGACCACAAGCG GCCTTGGACCACCGTGCACAGTAGATATAGCTGTCGGGTTGGCAACCAGT CGTATGCGAAAACTGAGGAATAGCAACTAAAGTAGAAACTGTTGTAGATA ACCCGTTGCTTCAGTAGTAACTGTCTTGGCCTGAGGATGACGTCATGTCC ATATCTATTACTGTATAAAGTGTTGCATATCGAATCAACAACTACATTCG ATAAAATATCGATAATGAAAGCTTGCTGTGCGAGCCCAATTGCTGGTGC
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Coding sequence (CDS) from alignment at H-elongata_contig77148:77..2625+

>mRNA_H-elongata_contig77148.15389.1 ID=mRNA_H-elongata_contig77148.15389.1|Name=mRNA_H-elongata_contig77148.15389.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=948bp|location=Sequence derived from alignment at H-elongata_contig77148:77..2625+ (Himanthalia elongata Himel1 dioecious)
ATGAAGGAGGACCTGGCTCGAATGGCGAAATACCACGGCGTCCCGATCGT
GCCACCTAAGGATCCTCGCGCTATGTTTGACACGCTTGGCGCCCAAAGAT
GAAGGAGGACCTGGCTCGAATGGCGAAATACCACGGCGTCCCGATCGTGC
CACCTAAGGATCCTCGCGCTATGTTTGACACGCTTGGCGCCCAAAGACTG
CTCACCGCCGCCGCCATGGACCATCCCCAGTCTCTGGAGAGGCTGACCCG
AGAGCTCTGGAGGCGAATCTGGGGTGGCGGGGGGGAAATCGTCTCAGCGC
AGACTGCTCACCGCCGCCGCCATGGACCATCCCCAGTCTCTGGAGAGGCT
GACCCGAGAGCTCTGGAGGCGAATCTGGGGTGGCGGGGGGGAAATCGTCT
CAGCGCAGGGCCTGGGGGAGGCGTGCTCGAGAGCGGGGCTAGCTGCGGAC
GCGACTCAGTTTATCTTGTCAAGGGCTGGGGAGGCGGAGGTGAAAGCGTG
CCTCAAGGAAACCACGGACGAGGCTCTCGACAGGGCCTGGGGGAGGCGTG
CTCGAGAGCGGGGCTAGCTGCGGACGCGACTCAGTTTATCTTGTCAAGGG
CTGGGGAGGCGGAGGTGAAAGCGTGCCTCAAGGAAACCACGGACGAGGCT
CTCGACAGGGGAGCTTTTGGCGCTCCTTGGACTACGATCCGCGTCGACGA
CGGGACTTGGGAGGCATTTTTCGGGTGCGATCGTTTCGAGGTGCTCGCCG
AGGCCCTGGGGAAGCCGTGGCTGGGTCCCCACCCGCCGCTGTCAAAGCTG
TGAGGGAGCTTTTGGCGCTCCTTGGACTACGATCCGCGTCGACGACGGGA
CTTGGGAGGCATTTTTCGGGTGCGATCGTTTCGAGGTGCTCGCCGAGGCC
CTGGGGAAGCCGTGGCTGGGTCCCCACCCGCCGCTGTCAAAGCTGTGA
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