mRNA_H-elongata_contig77012.15375.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig77012.15375.1 vs. uniprot
Match: A0A6H5KX22_9PHAE (Histone acetyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX22_9PHAE) HSP 1 Score: 200 bits (509), Expect = 1.180e-57 Identity = 125/238 (52.52%), Postives = 148/238 (62.18%), Query Frame = 1
Query: 4 AFYENVVQGFIVRGAEETKEPLYTQVAVAPVE-DGFDADAWGRMATRTTPPAGGGSFSVPSGRGD------GGQDIFCGRRGQEGMEMEDDRHIMDGARQAVHG-----ATQGGGSEELEWVEGVGVTTRRRRRKIVGLITCQVIPIERCRDRDRLGLQDRLWRGHG---HSEVVYILTLGTDRAHRRRGIGRALLRRCVWLSKKETSIGAVYLHVITTNPPAHRFYESEGFVQLCCI 672
AFYENVV+GFI RG + +EPLYTQVAV P DG + G T P G S +G GG CG ++G + + +A G A G S+ + G GV R RR IVGLITCQV+P+ RCRD+DRLGL + G G HSEVVYILTLGT+ ++RR+GIGRALLRRCVWLS++E SIGAVYLHVITTNP AHRFYESEGFVQ+CCI
Sbjct: 83 AFYENVVRGFITRGKGDVEEPLYTQVAVVPSPCDGCCGWSGGDSHTEEGPMDGDSSGKSETGEHSRRYPPHGGDVSGCGGAAEQGSAPGQGCSVTEREGRATPGSICPLADARGESDGILDEGGAGVW-RERRGNIVGLITCQVMPLSRCRDQDRLGLNTS-YGGRGGAAHSEVVYILTLGTETSYRRQGIGRALLRRCVWLSRQEKSIGAVYLHVITTNPAAHRFYESEGFVQVCCI 318
BLAST of mRNA_H-elongata_contig77012.15375.1 vs. uniprot
Match: D7FLI0_ECTSI (Histone acetyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLI0_ECTSI) HSP 1 Score: 184 bits (467), Expect = 5.940e-52 Identity = 120/246 (48.78%), Postives = 139/246 (56.50%), Query Frame = 1
Query: 4 AFYENVVQGFIVRGAEETKEPLYTQVAVAPVE-DGF---------------DADAWGRMAT----RTTPPAGGGSFSVPSGRGDGGQDIFCGRRGQEGMEMEDDRHIMDGARQAVHGATQGGGSEELEWVEGVGVTTRRRRRKIVGLITCQVIPIERCRDRDRLGLQDRLWRGHG--HSEVVYILTLGTDRAHRRRGIGRALLRRCVWLSKKETSIGAVYLHVITTNPPAHRFYESEGFVQLCCIT 675
AFYENVV+GFI RG + +EPLYTQVAV P DG D D+ G+ T R PP GG SG GD + +G G E + G A +I GLITCQV+P+ RCRD+DRLGL G G HSEVVYILTLGT+ +RR+GIGRALLRRCVWLS++E SIGAVYLHVITTNP AHRFYESEGFVQ+CCI+
Sbjct: 29 AFYENVVRGFIARGKGDVEEPLYTQVAVVPPPADGCCGWPGSDSHAEECPADGDSPGQSETGEQSRRYPPHGG----DVSGCGDAAEQGAATGQGCGGTERKGRATPGSGCPLAXXXXXX-----XXXXXXXXXXXXXXXXXEIAGLITCQVMPLSRCRDQDRLGLNTSYGGGGGAAHSEVVYILTLGTETRYRRQGIGRALLRRCVWLSRQEKSIGAVYLHVITTNPAAHRFYESEGFVQVCCIS 265
BLAST of mRNA_H-elongata_contig77012.15375.1 vs. uniprot
Match: A0A7S2SR30_9STRA (Histone acetyltransferase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SR30_9STRA) HSP 1 Score: 80.1 bits (196), Expect = 5.340e-14 Identity = 47/101 (46.53%), Postives = 59/101 (58.42%), Query Frame = 1
Query: 361 RRRKIVGLITCQVIPIERCRDRDRLGLQDRLWRGHGHSEVVYILTLGTDRAHRRRGIGRALLRRCVWLSKKETSIGAVYLHVITTNPPAHRFYESEGFVQL 663
+R +I G + QVIP C D L Q L+ V+YILTLGT +RRRG+ ++LL +CV +K AVYLHVIT N A RFYE GFV+L
Sbjct: 136 KRGRIAGAVIAQVIPERDCGDDGVLAPQG-LFSCSRRRSVMYILTLGTREEYRRRGVAQSLLAQCVERAKATPGCDAVYLHVITYNTAAIRFYEKNGFVRL 235
BLAST of mRNA_H-elongata_contig77012.15375.1 vs. uniprot
Match: A0A3M6VIC6_9STRA (Histone acetyltransferase n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VIC6_9STRA) HSP 1 Score: 73.6 bits (179), Expect = 5.780e-12 Identity = 40/102 (39.22%), Postives = 57/102 (55.88%), Query Frame = 1
Query: 358 RRRRKIVGLITCQVIPIERCRDRDRLGLQDRLWRGHGHSEVVYILTLGTDRAHRRRGIGRALLRRCVWLSKKETSIGAVYLHVITTNPPAHRFYESEGFVQL 663
RR I+G++T +P+ + D + D W H+E++YILTLGT + RR GI AL++ C+ + ++ GAVYLHV N A FYE GF L
Sbjct: 109 RRAETILGVVTASTLPLSKVDDPGLIASDD--WE---HTEIMYILTLGTRVSVRRMGIASALIQECIAQACRQPQCGAVYLHVKADNLSARHFYEKNGFKNL 205
BLAST of mRNA_H-elongata_contig77012.15375.1 vs. uniprot
Match: A0A484ECY0_BRELC (Histone acetyltransferase n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484ECY0_BRELC) HSP 1 Score: 73.2 bits (178), Expect = 9.080e-12 Identity = 39/102 (38.24%), Postives = 57/102 (55.88%), Query Frame = 1
Query: 358 RRRRKIVGLITCQVIPIERCRDRDRLGLQDRLWRGHGHSEVVYILTLGTDRAHRRRGIGRALLRRCVWLSKKETSIGAVYLHVITTNPPAHRFYESEGFVQL 663
R+ + G +T +P+ + D + + D W H++++YILTLGT + RR GI ALL+ C+ + ++ GAVYLHV N A RFYE GF L
Sbjct: 112 RQSENVFGAVTASTLPLSKVDDFNLISSDD--WE---HTQIMYILTLGTRSSARRMGIATALLQECIAQACRQPQCGAVYLHVKADNLNARRFYEKNGFQNL 208
BLAST of mRNA_H-elongata_contig77012.15375.1 vs. uniprot
Match: M4BEK5_HYAAE (Histone acetyltransferase n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BEK5_HYAAE) HSP 1 Score: 68.6 bits (166), Expect = 4.700e-10 Identity = 36/97 (37.11%), Postives = 53/97 (54.64%), Query Frame = 1
Query: 373 IVGLITCQVIPIERCRDRDRLGLQDRLWRGHGHSEVVYILTLGTDRAHRRRGIGRALLRRCVWLSKKETSIGAVYLHVITTNPPAHRFYESEGFVQL 663
I+G +T +P+ + D D + + + H++++YILTLGT + RR GI LL C+ + ++ GAVYLHV N A FYE GF L
Sbjct: 116 ILGAVTASTLPLSKVEDPDLIEPDNCV-----HTQIMYILTLGTRASVRRMGIASRLLEECIAQACRQPECGAVYLHVKADNLSARHFYEKHGFQNL 207
BLAST of mRNA_H-elongata_contig77012.15375.1 vs. uniprot
Match: A0A443SKL9_9ACAR (N-alpha-acetyltransferase 60 n=1 Tax=Leptotrombidium deliense TaxID=299467 RepID=A0A443SKL9_9ACAR) HSP 1 Score: 65.9 bits (159), Expect = 1.370e-9 Identity = 41/95 (43.16%), Postives = 52/95 (54.74%), Query Frame = 1
Query: 370 KIVGLITCQVIPIERCRDRDRLGLQDRLWRGHGHSEVVYILTLGTDRAHRRRGIGRALLRRCVWLSKKETSIGAVYLHVITTNPPAHRFYESEGF 654
+IVGLI ++ P +C D+ GL + + H+ V YILTLG + HRR GI LL + K AVYLHV+TTN A RFYE F
Sbjct: 64 QIVGLIVAEIKPQLKCNAEDQ-GLLSKQF--SKHTSVAYILTLGVVKEHRRYGIATLLLDNFIEHLMKSRDCKAVYLHVLTTNLVAIRFYEKRQF 155
BLAST of mRNA_H-elongata_contig77012.15375.1 vs. uniprot
Match: B5Y5M1_PHATC (Histone acetyltransferase (Fragment) n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B5Y5M1_PHATC) HSP 1 Score: 63.5 bits (153), Expect = 7.690e-9 Identity = 27/65 (41.54%), Postives = 44/65 (67.69%), Query Frame = 1
Query: 469 HSEVVYILTLGTDRAHRRRGIGRALLRRCVWLSKKETSIGAVYLHVITTNPPAHRFYESEGFVQL 663
++++ YI+TLGT +R+ G+G +++RC+ ++ G +YLHVIT N PA RFYE GF ++
Sbjct: 98 YTQLFYIMTLGTVTHYRQSGLGTTMIQRCIEEVERHPECGVLYLHVITFNEPAIRFYEKLGFYRV 162
BLAST of mRNA_H-elongata_contig77012.15375.1 vs. uniprot
Match: A0A7S2UNP0_9STRA (Histone acetyltransferase n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UNP0_9STRA) HSP 1 Score: 63.9 bits (154), Expect = 1.970e-8 Identity = 35/96 (36.46%), Postives = 54/96 (56.25%), Query Frame = 1
Query: 370 KIVGLITCQVIPIERC-RDRDRLGLQDRLWRGHGHSEVVYILTLGTDRAHRRRGIGRALLRRCVWLSKKETSIGAVYLHVITTNPPAHRFYESEGF 654
+I+G +T I RC ++ L + D H + YI+TLGT +R+ G+ +L++RC+ +++ G +YLHVIT N A RFYE GF
Sbjct: 187 QIIGCVTGTFIESNRCVKETAELLVPDP----DRHRRMFYIMTLGTITEYRKNGLATSLMKRCIEKIEQDPECGVIYLHVITYNKAAIRFYEKLGF 278
BLAST of mRNA_H-elongata_contig77012.15375.1 vs. uniprot
Match: A0A7S2UNP6_9STRA (Histone acetyltransferase (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UNP6_9STRA) HSP 1 Score: 63.9 bits (154), Expect = 2.090e-8 Identity = 35/96 (36.46%), Postives = 54/96 (56.25%), Query Frame = 1
Query: 370 KIVGLITCQVIPIERC-RDRDRLGLQDRLWRGHGHSEVVYILTLGTDRAHRRRGIGRALLRRCVWLSKKETSIGAVYLHVITTNPPAHRFYESEGF 654
+I+G +T I RC ++ L + D H + YI+TLGT +R+ G+ +L++RC+ +++ G +YLHVIT N A RFYE GF
Sbjct: 187 QIIGCVTGTFIESNRCVKETAELLVPDP----DRHRRMFYIMTLGTITEYRKNGLATSLMKRCIEKIEQDPECGVIYLHVITYNKAAIRFYEKLGF 278 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig77012.15375.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig77012.15375.1 >prot_H-elongata_contig77012.15375.1 ID=prot_H-elongata_contig77012.15375.1|Name=mRNA_H-elongata_contig77012.15375.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=225bp QAFYENVVQGFIVRGAEETKEPLYTQVAVAPVEDGFDADAWGRMATRTTPback to top mRNA from alignment at H-elongata_contig77012:1379..2798+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig77012.15375.1 ID=mRNA_H-elongata_contig77012.15375.1|Name=mRNA_H-elongata_contig77012.15375.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1420bp|location=Sequence derived from alignment at H-elongata_contig77012:1379..2798+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig77012:1379..2798+ >mRNA_H-elongata_contig77012.15375.1 ID=mRNA_H-elongata_contig77012.15375.1|Name=mRNA_H-elongata_contig77012.15375.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1350bp|location=Sequence derived from alignment at H-elongata_contig77012:1379..2798+ (Himanthalia elongata Himel1 dioecious)back to top |