mRNA_H-elongata_contig7701.15374.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig7701.15374.1 vs. uniprot
Match: D7FK04_ECTSI (Cysteine dioxygenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK04_ECTSI) HSP 1 Score: 171 bits (434), Expect = 1.220e-51 Identity = 87/163 (53.37%), Postives = 109/163 (66.87%), Query Frame = 1
Query: 1 CCRRLQTSHFETWIDGLVRAPDSSTRQFTRTLLARHESPPSLPS---IEIPGFDMLLLCWKPQAVSLIHDHPEASCWMKVLKGTLKETRYT---KGRRRI----------LEETSNLTYAAGGVTYIEDSMGFHKMANPSPTEESVSLHLYAPGITKCSTWSD 441
CCRRL T ETW L R+ + R FTRTLLAR++ S+P ++ PGFD+LLLCW+P AVS IHDHP+A+CW VL G +KETRY+ R I + +TS++T G VTYIEDSMG HKM NPS TEE +SLHLY+PGI +C+TW+D
Sbjct: 6 CCRRLHTPPLETWSHALARSTEEGPRPFTRTLLARYQPSSSVPERLDVDAPGFDLLLLCWRPGAVSDIHDHPKAACW--VLTGEIKETRYSLAPPADRGITSGDGDGGGNMVQTSSVTCTPGAVTYIEDSMGLHKMENPSSTEECISLHLYSPGILECTTWAD 166
BLAST of mRNA_H-elongata_contig7701.15374.1 vs. uniprot
Match: A0A6H5KD59_9PHAE (Cysteine dioxygenase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD59_9PHAE) HSP 1 Score: 164 bits (415), Expect = 5.520e-47 Identity = 84/161 (52.17%), Postives = 106/161 (65.84%), Query Frame = 1
Query: 7 RRLQTSHFETWIDGLVRAPDSSTRQFTRTLLARHESPPSLPS---IEIPGFDMLLLCWKPQAVSLIHDHPEASCWMKVLKGTLKETRY----------TKGRR---RILEETSNLTYAAGGVTYIEDSMGFHKMANPSPTEESVSLHLYAPGITKCSTWSD 441
RRL T ETW L RA + R FTRTLLAR++ SLP+ ++ PGFD+LLLCW+P A++ IHDHP+ +CW VL G +KETRY T G + +TS++T G VTYIEDSMG HKM NPS TEE +SLHLY+PGI +C+TW+D
Sbjct: 157 RRLHTPPLETWSHALARAAEEGPRHFTRTLLARYQPTSSLPARLDVDAPGFDLLLLCWRPGAMTDIHDHPKTACW--VLTGEIKETRYALAPPADRGITNGNGDGGENMVQTSSVTCTPGAVTYIEDSMGLHKMENPSSTEECISLHLYSPGILECTTWAD 315
BLAST of mRNA_H-elongata_contig7701.15374.1 vs. uniprot
Match: A0A1Z5JI66_FISSO (Cysteine dioxygenase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JI66_FISSO) HSP 1 Score: 107 bits (268), Expect = 2.200e-26 Identity = 55/127 (43.31%), Postives = 76/127 (59.84%), Query Frame = 1
Query: 70 STRQFTRTLLAR-HESPPSLPSIEIPGFDMLLLCWKPQAVSLIHDHPEASCWMKVLKGTLKETRYTKG--RRRILEETSNLTYAAGGVTYIEDSMGFHKMANPSPTEESVSLHLYAPGITKCSTWSD 441
S+R +TR L+A HE+ + +LLLCW P S IHDHP CWM+VL+G + E R+ K R + T N Y+AG + Y+EDSMG+H++ NPS E +V+LHLY P +C W+D
Sbjct: 77 SSRPYTRNLVATDHET-----------YTLLLLCWNPGQASPIHDHPCDGCWMRVLQGCVHEERFVKSVVDHRTMHCTRNELYSAGELLYMEDSMGYHRVGNPSADELAVTLHLYCPPYHQCKIWAD 192
BLAST of mRNA_H-elongata_contig7701.15374.1 vs. uniprot
Match: A0A0P1ABR9_PLAHL (Cysteine dioxygenase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1ABR9_PLAHL) HSP 1 Score: 103 bits (257), Expect = 6.420e-25 Identity = 49/123 (39.84%), Postives = 72/123 (58.54%), Query Frame = 1
Query: 73 TRQFTRTLLARHESPPSLPSIEIPGFDMLLLCWKPQAVSLIHDHPEASCWMKVLKGTLKETRYTKGRRRILEETSNLTYAAGGVTYIEDSMGFHKMANPSPTEESVSLHLYAPGITKCSTWSD 441
+R +TR L+ S + + ++LLCW P S +HDHP CW+KV++G + E RY K R++E T N+ +G VTY++DS GFHK+ NP ++S+HLY+P KC W D
Sbjct: 61 SRNYTRNLI----------STDNETYALMLLCWNPGKYSPVHDHPTDGCWVKVIQGNVNEVRYEKQNNRLVE-TLNVVLTSG-VTYMDDSYGFHKVGNPHTKMNAISMHLYSPPYEKCRVWFD 171
BLAST of mRNA_H-elongata_contig7701.15374.1 vs. uniprot
Match: A0A0W8DAX2_PHYNI (Cysteine dioxygenase n=10 Tax=Phytophthora TaxID=4783 RepID=A0A0W8DAX2_PHYNI) HSP 1 Score: 107 bits (266), Expect = 4.270e-24 Identity = 49/123 (39.84%), Postives = 75/123 (60.98%), Query Frame = 1
Query: 73 TRQFTRTLLARHESPPSLPSIEIPGFDMLLLCWKPQAVSLIHDHPEASCWMKVLKGTLKETRYTKGRRRILEETSNLTYAAGGVTYIEDSMGFHKMANPSPTEESVSLHLYAPGITKCSTWSD 441
+R +TR L+ S + + ++LLCW P S +HDHP CW+K+++G + E RY K +++E TSN+ + +G VTY++DS G HK+ NP P ++S+HLY+P KCS W D
Sbjct: 733 SRNYTRNLI----------STDNETYALMLLCWNPGKYSPVHDHPTDGCWVKIIQGHVNEVRYEKQNGKLVE-TSNVVFTSG-VTYMDDSFGLHKVGNPHPEINAISMHLYSPPYEKCSVWFD 843
BLAST of mRNA_H-elongata_contig7701.15374.1 vs. uniprot
Match: A0A024TVA6_9STRA (Cysteine dioxygenase n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TVA6_9STRA) HSP 1 Score: 101 bits (251), Expect = 6.000e-24 Identity = 53/133 (39.85%), Postives = 76/133 (57.14%), Query Frame = 1
Query: 40 IDGLVR-APDSSTRQFTRTLLARHESPPSLPSIEIPGFDMLLLCWKPQAVSLIHDHPEASCWMKVLKGTLKETRYTKGRRRILEETSNLTYAAGGVTYIEDSMGFHKMANPSPTEESVSLHLYAPGITKCSTW 435
+D L R A +R +TR L+A + ++LLCW S IHDHP CW++ ++GT+ E RY LE+TS T+ + GVTY++DS+G HK+ NPS T ++++LHLYAP KC W
Sbjct: 57 LDELKRYAHFDPSRNYTRNLIATDNQ----------TYALMLLCWNKGKYSPIHDHPSDGCWVRHIQGTVHEVRYWNNGTS-LEQTSE-TFVSEGVTYMDDSLGLHKIGNPSDTTDAITLHLYAPPYDKCRLW 177
BLAST of mRNA_H-elongata_contig7701.15374.1 vs. uniprot
Match: A0A6G0XHB0_9STRA (Cysteine dioxygenase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XHB0_9STRA) HSP 1 Score: 101 bits (252), Expect = 6.770e-24 Identity = 54/139 (38.85%), Postives = 79/139 (56.83%), Query Frame = 1
Query: 28 FETWIDGLVR-APDSSTRQFTRTLLARHESPPSLPSIEIPGFDMLLLCWKPQAVSLIHDHPEASCWMKVLKGTLKETRYTKGRRRILEETSNLTYAAGGVTYIEDSMGFHKMANPSPTEESVSLHLYAPGITKCSTWSD 441
F+ +D L R A TR +TR L+ S + + ++ LCW S IHDHP CW++ ++GTL E RY +++E TSN+ AG V+Y++DS+G HK+ NPS ++++LHLYAP KC W D
Sbjct: 75 FDANMDDLKRYALFDPTRYYTRNLI----------STDNASYALMFLCWNKGKYSPIHDHPSDGCWVRHIQGTLNEVRYWNDGAKLVE-TSNVLITAG-VSYMDDSLGLHKIGNPSTDVDAITLHLYAPPYEKCRLWFD 201
BLAST of mRNA_H-elongata_contig7701.15374.1 vs. uniprot
Match: K1X9H7_MARBU (Cysteine dioxygenase n=1 Tax=Marssonina brunnea f. sp. multigermtubi (strain MB_m1) TaxID=1072389 RepID=K1X9H7_MARBU) HSP 1 Score: 102 bits (255), Expect = 7.430e-24 Identity = 60/139 (43.17%), Postives = 79/139 (56.83%), Query Frame = 1
Query: 10 RLQTSHFETWIDGLVRAPDSSTRQFTRTLLARHESPPSLPSIEIPGFDMLLLCWKPQAVSLIHDHPEASCWMKVLKGTLKETRYT--KGRRRI---LEETSNLTYAAGGVTYIEDSMGFHKMANPSPTEESVSLHLYAP 411
R TSH W V+ PD +Q+TR L+A P I F++L+L W P S +HDH + C MK+L+GTL+ETRY +G+ + L E YAAG V YI D +G H++ NPS TE +VSLHLY P
Sbjct: 117 RAYTSHPSHWSQYAVQNPD---KQYTRNLVAEE------PKI----FNLLILVWTPGKRSPVHDHASSHCLMKILQGTLRETRYEMPEGKDSVEGGLRELQRKEYAAGKVAYISDRLGLHEICNPSETEYAVSLHLYTP 242
BLAST of mRNA_H-elongata_contig7701.15374.1 vs. uniprot
Match: A0A8K1CM57_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CM57_PYTOL) HSP 1 Score: 100 bits (249), Expect = 9.160e-24 Identity = 49/124 (39.52%), Postives = 74/124 (59.68%), Query Frame = 1
Query: 73 TRQFTRTLLAR-HESPPSLPSIEIPGFDMLLLCWKPQAVSLIHDHPEASCWMKVLKGTLKETRYTKGRRRILEETSNLTYAAGGVTYIEDSMGFHKMANPSPTEESVSLHLYAPGITKCSTWSD 441
+R +TR L++ HE+ + ++L+CW S IHDHP CW+K ++G + E RY + R++E TSN+ GVTY++DS+GFHK+ NP +S+++HLYAP KC W D
Sbjct: 58 SRNYTRNLISTDHET-----------YALMLICWNRGKYSPIHDHPSDGCWVKCIQGHVNEVRYERRGERLVE-TSNIVLT-DGVTYMDDSLGFHKVGNPREDMDSITMHLYAPPYEKCRIWFD 168
BLAST of mRNA_H-elongata_contig7701.15374.1 vs. uniprot
Match: A0A024U3B0_9STRA (Cysteine dioxygenase n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U3B0_9STRA) HSP 1 Score: 102 bits (253), Expect = 9.340e-24 Identity = 53/139 (38.13%), Postives = 79/139 (56.83%), Query Frame = 1
Query: 28 FETWIDGLVR-APDSSTRQFTRTLLARHESPPSLPSIEIPGFDMLLLCWKPQAVSLIHDHPEASCWMKVLKGTLKETRYTKGRRRILEETSNLTYAAGGVTYIEDSMGFHKMANPSPTEESVSLHLYAPGITKCSTWSD 441
F+ +D L R A +R +TR L+ S + + ++LLCW S IHDHP CW++ ++GTL E RY +++E TSN T GV+Y++DS+G HK+ NPS ++++LHLY+P KC W D
Sbjct: 104 FDGSMDALERYAHFDPSRNYTRNLI----------STDNTSYALMLLCWNRGKYSPIHDHPSDGCWVRHIQGTLNEVRYWNDGEKLIE-TSN-TLITSGVSYMDDSLGLHKIGNPSTDVDAITLHLYSPPYNKCRLWFD 230 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig7701.15374.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig7701.15374.1 >prot_H-elongata_contig7701.15374.1 ID=prot_H-elongata_contig7701.15374.1|Name=mRNA_H-elongata_contig7701.15374.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=147bp CCRRLQTSHFETWIDGLVRAPDSSTRQFTRTLLARHESPPSLPSIEIPGFback to top mRNA from alignment at H-elongata_contig7701:3660..4680- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig7701.15374.1 ID=mRNA_H-elongata_contig7701.15374.1|Name=mRNA_H-elongata_contig7701.15374.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1021bp|location=Sequence derived from alignment at H-elongata_contig7701:3660..4680- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig7701:3660..4680- >mRNA_H-elongata_contig7701.15374.1 ID=mRNA_H-elongata_contig7701.15374.1|Name=mRNA_H-elongata_contig7701.15374.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=882bp|location=Sequence derived from alignment at H-elongata_contig7701:3660..4680- (Himanthalia elongata Himel1 dioecious)back to top |