mRNA_H-elongata_contig76954.15365.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig76954.15365.1
Unique NamemRNA_H-elongata_contig76954.15365.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig76954.15365.1 vs. uniprot
Match: D8LMY1_ECTSI (Protein-synthesizing GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMY1_ECTSI)

HSP 1 Score: 340 bits (871), Expect = 1.180e-113
Identity = 171/194 (88.14%), Postives = 178/194 (91.75%), Query Frame = 1
Query:    1 VCTQTVRFKNELERNITIKLGYANAKIYKAVQGAVPGPGNFRSKGSHHADRFEEDGKTWELQRHVSFVDCPGHDILMATMLNGAAVMDAALLLVAGNETCPQPQTSEHLAAVEIMRLKNIIILQNKASESREFCLLSMSVDLVKHDQAMVQHEQIRKFVAGTVANDAPVIPISAVLKYNIDVVCEYIHCKIPIP 582
            +  QTVRFKNELERNITIKLGYANAKI+KAV+GAVPGPGNFRSKGSHH DRFEEDGKTWELQRHVSFVDCPGHDILMATMLNGAAVMDAALLLVAGNETCPQPQTSEHLAAVEIMRL+NIIILQNK             VDLVKHDQAM+QHEQIRKFVAGTVA+DAPVIPISAVLKYNIDVVCEYI+CKIPIP
Sbjct:   42 LAVQTVRFKNELERNITIKLGYANAKIFKAVEGAVPGPGNFRSKGSHHGDRFEEDGKTWELQRHVSFVDCPGHDILMATMLNGAAVMDAALLLVAGNETCPQPQTSEHLAAVEIMRLQNIIILQNK-------------VDLVKHDQAMLQHEQIRKFVAGTVADDAPVIPISAVLKYNIDVVCEYINCKIPIP 222          
BLAST of mRNA_H-elongata_contig76954.15365.1 vs. uniprot
Match: A0A835YYS7_9STRA (Protein-synthesizing GTPase n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYS7_9STRA)

HSP 1 Score: 285 bits (729), Expect = 1.380e-91
Identity = 147/192 (76.56%), Postives = 163/192 (84.90%), Query Frame = 1
Query:   10 QTVRFKNELERNITIKLGYANAKIYKAVQGAVPGP-GNFRSKGSHHADRFEEDGKTWELQRHVSFVDCPGHDILMATMLNGAAVMDAALLLVAGNETCPQPQTSEHLAAVEIMRLKNIIILQNKASESREFCLLSMSVDLVKHDQAMVQHEQIRKFVAGTVANDAPVIPISAVLKYNIDVVCEYIHCKIPIP 582
            QTVRFKNELERNITIKLGYANAK+Y A +GA  G  GN+ S+GS HAD FEE+GK W LQRHVSFVDCPGHDILMATMLNGAAVMDAALLLVAGNE CPQPQTSEHLAAVEIMRL+NIIILQNK             VDLVK DQA++QHEQI++FVAGTVA++AP+IPISAV++YN+DVVCEYI   IPIP
Sbjct:   93 QTVRFKNELERNITIKLGYANAKVYNAQEGAREGELGNYTSRGSAHADVFEENGKQWHLQRHVSFVDCPGHDILMATMLNGAAVMDAALLLVAGNEPCPQPQTSEHLAAVEIMRLQNIIILQNK-------------VDLVKQDQALLQHEQIKRFVAGTVADNAPIIPISAVMRYNVDVVCEYICNNIPIP 271          
BLAST of mRNA_H-elongata_contig76954.15365.1 vs. uniprot
Match: A0A6U4HRZ6_9STRA (Protein-synthesizing GTPase n=4 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4HRZ6_9STRA)

HSP 1 Score: 283 bits (723), Expect = 1.160e-90
Identity = 144/191 (75.39%), Postives = 160/191 (83.77%), Query Frame = 1
Query:   10 QTVRFKNELERNITIKLGYANAKIYKAVQGAVPGPGNFRSKGSHHADRFEEDGKTWELQRHVSFVDCPGHDILMATMLNGAAVMDAALLLVAGNETCPQPQTSEHLAAVEIMRLKNIIILQNKASESREFCLLSMSVDLVKHDQAMVQHEQIRKFVAGTVANDAPVIPISAVLKYNIDVVCEYIHCKIPIP 582
            QTVRFKNEL RNITIKLGYANAK+YKA   A   PGN+RSKGS H D FEEDGKTWELQRHVSFVDCPGHDILMATMLNGAAVMDAALLL+AGNE CPQPQTSEHLAAVEIMRL++IIILQNK             VDLVK + A+ QH+QIR+FVAGTVA+ APVIP+SAVLKYN+DV+CEY+  ++P P
Sbjct:   87 QTVRFKNELVRNITIKLGYANAKLYKARDAAPGVPGNYRSKGSAHPDVFEEDGKTWELQRHVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNEPCPQPQTSEHLAAVEIMRLQHIIILQNK-------------VDLVKEEDALAQHQQIRRFVAGTVADSAPVIPMSAVLKYNVDVLCEYLVHRVPEP 264          
BLAST of mRNA_H-elongata_contig76954.15365.1 vs. uniprot
Match: A0A6S9GDD6_HETAK (Protein-synthesizing GTPase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9GDD6_HETAK)

HSP 1 Score: 278 bits (711), Expect = 3.940e-89
Identity = 145/191 (75.92%), Postives = 158/191 (82.72%), Query Frame = 1
Query:   10 QTVRFKNELERNITIKLGYANAKIYKAVQGAVPGPGNFRSKGSHHADRFEEDGKTWELQRHVSFVDCPGHDILMATMLNGAAVMDAALLLVAGNETCPQPQTSEHLAAVEIMRLKNIIILQNKASESREFCLLSMSVDLVKHDQAMVQHEQIRKFVAGTVANDAPVIPISAVLKYNIDVVCEYIHCKIPIP 582
            QTVRFKNELERNITIKLGYANAKIYKA      G G++RS GS   DRFEE GKTWEL RHVSFVDCPGHDILMATMLNGAAVMDAALLLVAGNE CPQPQTSEHLAAVEIMRL+NIIILQNK             VDLVK +QA+ QHEQI++FVAGTVA+ APV+P+SAVLKYNIDVVCEY+   +P+P
Sbjct:   78 QTVRFKNELERNITIKLGYANAKIYKAA--GEEGMGSYRSWGSSKPDRFEEGGKTWELVRHVSFVDCPGHDILMATMLNGAAVMDAALLLVAGNEPCPQPQTSEHLAAVEIMRLQNIIILQNK-------------VDLVKQEQALAQHEQIKRFVAGTVADAAPVVPVSAVLKYNIDVVCEYLAKDVPVP 253          
BLAST of mRNA_H-elongata_contig76954.15365.1 vs. uniprot
Match: A0A7S4A8Q2_9STRA (Protein-synthesizing GTPase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A8Q2_9STRA)

HSP 1 Score: 275 bits (703), Expect = 4.140e-88
Identity = 149/192 (77.60%), Postives = 154/192 (80.21%), Query Frame = 1
Query:   10 QTVRFKNELERNITIKLGYANAKIYKAVQGAVPGPGNFRSKGSHHADRFEE-DGKTWELQRHVSFVDCPGHDILMATMLNGAAVMDAALLLVAGNETCPQPQTSEHLAAVEIMRLKNIIILQNKASESREFCLLSMSVDLVKHDQAMVQHEQIRKFVAGTVANDAPVIPISAVLKYNIDVVCEYIHCKIPIP 582
            QTVRFKNELERNITIKLGYANAKIYK V    PGPGNF S+GS   D FE+ DG  W L RHVSFVDCPGHDILMATMLNGAAVMDAALLLVAGNE CPQPQTSEHLAAVEIMRL+NI+ILQNK             VDLVK DQA  QHEQIRKFVAGTVA DAPVIPISAVLKYNID VCEY+   IP P
Sbjct:   58 QTVRFKNELERNITIKLGYANAKIYKRVA-ERPGPGNFCSRGSATPDAFEDGDGARWALARHVSFVDCPGHDILMATMLNGAAVMDAALLLVAGNEPCPQPQTSEHLAAVEIMRLENILILQNK-------------VDLVKPDQARAQHEQIRKFVAGTVAGDAPVIPISAVLKYNIDAVCEYVAHAIPTP 235          
BLAST of mRNA_H-elongata_contig76954.15365.1 vs. uniprot
Match: A0A7S2XYP2_9STRA (Protein-synthesizing GTPase (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYP2_9STRA)

HSP 1 Score: 274 bits (700), Expect = 8.350e-88
Identity = 144/194 (74.23%), Postives = 159/194 (81.96%), Query Frame = 1
Query:   10 QTVRFKNELERNITIKLGYANAKIYKA---VQGAVPGPGNFRSKGSHHADRFEEDGKTWELQRHVSFVDCPGHDILMATMLNGAAVMDAALLLVAGNETCPQPQTSEHLAAVEIMRLKNIIILQNKASESREFCLLSMSVDLVKHDQAMVQHEQIRKFVAGTVANDAPVIPISAVLKYNIDVVCEYIHCKIPIP 582
            QTVRFKNE+ERNITIKLGYANAKIY+A    +G  P  G +RSKGS  AD FEE G+TW L RHVSFVDCPGHDILMATMLNGAAVMDAALLL+AGNE CPQPQTSEHLAAVEIMRL ++IILQNK             VDLVK +QAMVQHEQI+KFVAGTVA++APVIPISAVL+YNIDV CE+I   IP+P
Sbjct:   86 QTVRFKNEMERNITIKLGYANAKIYQADKLEEGEAPQMGLYRSKGSSTADVFEEGGRTWRLVRHVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNEPCPQPQTSEHLAAVEIMRLNHVIILQNK-------------VDLVKPEQAMVQHEQIKKFVAGTVADNAPVIPISAVLRYNIDVACEFIARNIPVP 266          
BLAST of mRNA_H-elongata_contig76954.15365.1 vs. uniprot
Match: A0A2R5G8R1_9STRA (Protein-synthesizing GTPase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G8R1_9STRA)

HSP 1 Score: 273 bits (699), Expect = 3.600e-87
Identity = 138/191 (72.25%), Postives = 160/191 (83.77%), Query Frame = 1
Query:   10 QTVRFKNELERNITIKLGYANAKIYKAVQGAVPGPGNFRSKGSHHADRFEEDGKTWELQRHVSFVDCPGHDILMATMLNGAAVMDAALLLVAGNETCPQPQTSEHLAAVEIMRLKNIIILQNKASESREFCLLSMSVDLVKHDQAMVQHEQIRKFVAGTVANDAPVIPISAVLKYNIDVVCEYIHCKIPIP 582
            +TVRFKNELERNITIKLGYANAKIY+ V    P PGN+ S+GS+ AD FE++  TWEL+RH+SFVDCPGHDILMATMLNGAAVMDAALLL+AGNE+CPQPQTSEHLAAVEIM+L+NIIILQNK             +DLVK D A+ QHEQIR+FVAGTVA+ +P+IPISAVLKYNIDV+CEY+   IP+P
Sbjct:   91 KTVRFKNELERNITIKLGYANAKIYECVNPDCPKPGNYTSRGSNTADVFEDEKGTWELRRHLSFVDCPGHDILMATMLNGAAVMDAALLLIAGNESCPQPQTSEHLAAVEIMKLQNIIILQNK-------------IDLVKEDAAIQQHEQIRQFVAGTVADKSPIIPISAVLKYNIDVICEYMVKHIPVP 268          
BLAST of mRNA_H-elongata_contig76954.15365.1 vs. uniprot
Match: A0A812SA83_SYMMI (Protein-synthesizing GTPase n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812SA83_SYMMI)

HSP 1 Score: 272 bits (695), Expect = 1.520e-86
Identity = 145/191 (75.92%), Postives = 156/191 (81.68%), Query Frame = 1
Query:   10 QTVRFKNELERNITIKLGYANAKIYKAVQGAVPGPGNFRSKGSHHADRFEEDGKTWELQRHVSFVDCPGHDILMATMLNGAAVMDAALLLVAGNETCPQPQTSEHLAAVEIMRLKNIIILQNKASESREFCLLSMSVDLVKHDQAMVQHEQIRKFVAGTVANDAPVIPISAVLKYNIDVVCEYIHCKIPIP 582
            QTVRFKNEL RNITIKLGYANAKIY+A  G     G +RSKGS  AD F EDGKTW +QRHVSFVDCPGHDILMATMLNGAAVMDAALLL+AGNETCPQPQTSEHLAAVEIM+L +IIILQNK             VDLVK +QA  QHEQIRKFVAGTVA+ AP+IPISAVL+YNID+VCEYI   IPIP
Sbjct:   84 QTVRFKNELIRNITIKLGYANAKIYRA-DGPANEMGLYRSKGSSTADSFVEDGKTWNVQRHVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNETCPQPQTSEHLAAVEIMKLPHIIILQNK-------------VDLVKQEQAEAQHEQIRKFVAGTVADSAPIIPISAVLRYNIDMVCEYIARYIPIP 260          
BLAST of mRNA_H-elongata_contig76954.15365.1 vs. uniprot
Match: K3WE95_GLOUD (Protein-synthesizing GTPase n=29 Tax=Oomycota TaxID=4762 RepID=K3WE95_GLOUD)

HSP 1 Score: 266 bits (681), Expect = 8.980e-85
Identity = 144/194 (74.23%), Postives = 154/194 (79.38%), Query Frame = 1
Query:   10 QTVRFKNELERNITIKLGYANAKIYKAVQGAVPGPGNFRSKGSHHADRFEE---DGKTWELQRHVSFVDCPGHDILMATMLNGAAVMDAALLLVAGNETCPQPQTSEHLAAVEIMRLKNIIILQNKASESREFCLLSMSVDLVKHDQAMVQHEQIRKFVAGTVANDAPVIPISAVLKYNIDVVCEYIHCKIPIP 582
            QTVRFKNELERNITIKLGYANAKIY+A  G   G G +R+ GS   DRF +   D   W LQRHVSFVDCPGHDILMATMLNGAAVMDAALLLVAGNE CPQPQTSEHLAA+EIMRL+NIIILQNK             VDL+K D A  QHEQI+KFVAGTVA+DAP+IPISAVLKYNIDVVCEYI   IPIP
Sbjct:   60 QTVRFKNELERNITIKLGYANAKIYRAENGT--GIGCYRAFGSSKPDRFVDEVDDNTVWVLQRHVSFVDCPGHDILMATMLNGAAVMDAALLLVAGNEVCPQPQTSEHLAAIEIMRLQNIIILQNK-------------VDLIKEDAACAQHEQIKKFVAGTVAHDAPIIPISAVLKYNIDVVCEYICRNIPIP 238          
BLAST of mRNA_H-elongata_contig76954.15365.1 vs. uniprot
Match: W7U2Z3_9STRA (Protein-synthesizing GTPase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U2Z3_9STRA)

HSP 1 Score: 266 bits (680), Expect = 1.230e-84
Identity = 139/190 (73.16%), Postives = 152/190 (80.00%), Query Frame = 1
Query:   13 TVRFKNELERNITIKLGYANAKIYKAVQGAVPGPGNFRSKGSHHADRFEEDGKTWELQRHVSFVDCPGHDILMATMLNGAAVMDAALLLVAGNETCPQPQTSEHLAAVEIMRLKNIIILQNKASESREFCLLSMSVDLVKHDQAMVQHEQIRKFVAGTVANDAPVIPISAVLKYNIDVVCEYIHCKIPIP 582
            TVR K ELERNITIKLGYANAKIYK        PGN+R+KGS   D FEEDGKTW LQRHVSFVDCPGHDILMATMLNGAAVMDAALLL+AGNE CPQPQTSEHLAAVEIMRL NIIILQNK             VDLVK   A +QH+QIRKFVAGTVA+ +P+IPISAV K+NID+VCEY+  +IP+P
Sbjct:   47 TVRTKPELERNITIKLGYANAKIYKCDPAEEGVPGNYRAKGSSAPDVFEEDGKTWRLQRHVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNEACPQPQTSEHLAAVEIMRLANIIILQNK-------------VDLVKPADASMQHDQIRKFVAGTVADASPIIPISAVKKFNIDIVCEYLVNRIPVP 223          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig76954.15365.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LMY1_ECTSI1.180e-11388.14Protein-synthesizing GTPase n=2 Tax=Ectocarpus Tax... [more]
A0A835YYS7_9STRA1.380e-9176.56Protein-synthesizing GTPase n=2 Tax=Tribonema minu... [more]
A0A6U4HRZ6_9STRA1.160e-9075.39Protein-synthesizing GTPase n=4 Tax=Phaeomonas par... [more]
A0A6S9GDD6_HETAK3.940e-8975.92Protein-synthesizing GTPase n=1 Tax=Heterosigma ak... [more]
A0A7S4A8Q2_9STRA4.140e-8877.60Protein-synthesizing GTPase n=1 Tax=Pelagomonas ca... [more]
A0A7S2XYP2_9STRA8.350e-8874.23Protein-synthesizing GTPase (Fragment) n=1 Tax=Fib... [more]
A0A2R5G8R1_9STRA3.600e-8772.25Protein-synthesizing GTPase n=1 Tax=Hondaea fermen... [more]
A0A812SA83_SYMMI1.520e-8675.92Protein-synthesizing GTPase n=1 Tax=Symbiodinium m... [more]
K3WE95_GLOUD8.980e-8574.23Protein-synthesizing GTPase n=29 Tax=Oomycota TaxI... [more]
W7U2Z3_9STRA1.230e-8473.16Protein-synthesizing GTPase n=2 Tax=Monodopsidacea... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig76954contigH-elongata_contig76954:439..2703 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score338.6
Seed ortholog evalue2e-90
Seed eggNOG ortholog2880.D8LMY1
Preferred nameeIF-2gamma
KEGG rclassRC00003,RC00060,RC00181,RC00496
KEGG koko:K03242,ko:K04257,ko:K11419
KEGG ReactionR03875,R03938,R04866,R04867
KEGG Pathwayko00310,ko03013,ko04740,map00310,map03013,map04740
GOsGO:0001731,GO:0002181,GO:0002183,GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005850,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0016282,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043614,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0065003,GO:0070993,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904
EggNOG free text desc.translation initiation factor activity
EggNOG OGsCOG3276@1,KOG0466@2759
EC2.1.1.43
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03012,ko03036,ko04030
Hectar predicted targeting categoryother localisation
Exons4
Model size582
Cds size582
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig76954.15365.1prot_H-elongata_contig76954.15365.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig76954 439..2703 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931173.7645469-CDS-H-elongata_contig76954:438..5631622931173.7645469-CDS-H-elongata_contig76954:438..563Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig76954 439..563 +
1691679728.4760752-CDS-H-elongata_contig76954:438..5631691679728.4760752-CDS-H-elongata_contig76954:438..563Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig76954 439..563 +
1622931173.7829285-CDS-H-elongata_contig76954:1112..12421622931173.7829285-CDS-H-elongata_contig76954:1112..1242Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig76954 1113..1242 +
1691679728.4929936-CDS-H-elongata_contig76954:1112..12421691679728.4929936-CDS-H-elongata_contig76954:1112..1242Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig76954 1113..1242 +
1622931173.7964694-CDS-H-elongata_contig76954:2035..21971622931173.7964694-CDS-H-elongata_contig76954:2035..2197Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig76954 2036..2197 +
1691679728.5080116-CDS-H-elongata_contig76954:2035..21971691679728.5080116-CDS-H-elongata_contig76954:2035..2197Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig76954 2036..2197 +
1622931173.811911-CDS-H-elongata_contig76954:2538..27031622931173.811911-CDS-H-elongata_contig76954:2538..2703Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig76954 2539..2703 +
1691679728.521222-CDS-H-elongata_contig76954:2538..27031691679728.521222-CDS-H-elongata_contig76954:2538..2703Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig76954 2539..2703 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig76954.15365.1

>prot_H-elongata_contig76954.15365.1 ID=prot_H-elongata_contig76954.15365.1|Name=mRNA_H-elongata_contig76954.15365.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=194bp
VCTQTVRFKNELERNITIKLGYANAKIYKAVQGAVPGPGNFRSKGSHHAD
RFEEDGKTWELQRHVSFVDCPGHDILMATMLNGAAVMDAALLLVAGNETC
PQPQTSEHLAAVEIMRLKNIIILQNKASESREFCLLSMSVDLVKHDQAMV
QHEQIRKFVAGTVANDAPVIPISAVLKYNIDVVCEYIHCKIPIP
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mRNA from alignment at H-elongata_contig76954:439..2703+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig76954.15365.1 ID=mRNA_H-elongata_contig76954.15365.1|Name=mRNA_H-elongata_contig76954.15365.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2265bp|location=Sequence derived from alignment at H-elongata_contig76954:439..2703+ (Himanthalia elongata Himel1 dioecious)
GTGTGTACACAGACCGTTCGCTTCAAGAACGAACTAGAGCGCAACATCAC GATTAAGCTGGGCTATGCGAACGCCAAGATCTACAAGGCCGTGCAGGGCG CCGTGCCAGGACCCGGAAACTTCAGGTGAGAGATAACTCACTCCCCCCCC CCCCACCCCCCAATCCGCTTCCCGTTGCTGTGTTTTCTCGTGTCATATAC CTCGGCCAACTGCGTTTGCAGCCCCGCCGCCGCCGCTCAGCCTGAGTCCC TAAGGAAGTGGCGATTTCGGCCGTGTTACCGCGAGGAACGTGACGCCGTC TGCGGTCTTTTGTCTCGCGGCAATGTATAGCCCATAGAGTGGAGAGACCT TGACAGACACCCCGCTCCCCCCAAAAAATCTTTAATCCTCTGCTGTGTGC TATACTATTTAAGCATACCGATGTTACCGAATCGAGCAGTATTTCAGAGT CACCGTTGTTGTGTTAGGACAGAGGAGGGGGTCGAGACACCAGGTCACGC CCCGCGGCCATGGCGTTCTGACCTCGAGCGCCTCTCCGCTCTCGCTAAAC AAGCCTTTCTTTTTGTCAAGAGGCGGGCCACCGTTTGGAGTCGTGGCCCT CCATCAACCGATCCTATACGACAACCGCCTTCTTGACACTCAACCTCACG CGTTCGCGCGACCACCGCTCGTAGGTCTAAGGGTAGTCATCACGCAGATC GCTTCGAGGAGGATGGCAAGACATGGGAGCTGCAGAGGCACGTCTCCTTC GTTGATTGTCCCGGGCACGATATCCTCATGGCCACCATGCTCAATGGCGC GGCGGTAAGGGACGGAAAACAACGCACACAAGGCCGCGGGAGGGGTTTCA ATGGGAGATGAGAGCGATAGGTGTTTATGAAGCGTGGAGTTGATTCTCTC GTAGGTTTCAGTCTGGATAACGACAGGGCTTGCACCGGGATTCCAACGTT GTAGCCAAAAGGTCGTGCCATCACTTTTCTAAAATGTTTTAGAAGTCTTG TTGGTGTTCTTTTAAAGATCATCATCAGCCAATCATCAGCCAGCTCTAAG CTTTTGTCCGAGCTGCACCATTCATGAAAACACTGATTTTGATTTTTAGG TTGGAGATGCTCGTTGCCCGAGTATATAATGTTGTCTAGTGGTAACCACA TACCGGTATTAATATTAGGCCATGAGTGCGGAGATCATGGGTTTCGAATC CCACCAAGATTTTTTTTTTTATTCTGTAGCGGTAATAGTCTAAAGCTAGT ATTAGAACGGGAAAACGAGAGGAAGCAAATTTCATCCATTGGTTGGTTGG CGAGGTGTAGGAGGGCTGAAGTTGGCATCGTGATAAAGAACCGGTCTGAA GTAGGCGTGAACCGACCGGGGATAGGTAGGTCGATCCCCCCTTAGAGCCA CAGGCGGGATGAGCAGCCTTGCAGTGAATGGCCTCAAACGGTAGAAATTC AGGCTTAAAAAAAAGCAAGCTCGTACATACTGTAGAGAGCTGGAGTAAGG CCTCGAATTTCAAACGGGCGATGAAGTATTAATCGGAATGGGCGTTTTTG GATCGTGAGCTGTATCTCCTTCTCTCTGCGGTGTTTTTTGTTAACAGGTG ATGGACGCGGCGTTGCTGCTCGTCGCGGGGAACGAGACATGTCCGCAGCC TCAGACGAGCGAGCACTTAGCCGCCGTGGAGATCATGCGCCTCAAGAACA TCATCATTCTCCAGAACAAGGCGAGCGAGTCTCGCGAGTTTTGCCTCTTA AGTATGTCCGTGATGTAATGTGTGATGTGCATCTCTCTCCTCTTGTATGG TATTGTATTTTAGTTATTGTTACGTATGTGATGCCGTTTGCGTTTTTGAT TCGAGGTCTGTATGTGTTTGTCCACCTGCAGCCCGCTGTACTGAAGGCCA TTCGCAAAGACATTCCCCCTACCAAAACACAACGCTCACCTCTGGACGTA CTTATCTGCCTCTTCCGTCCGGCTAGTTTATACTGTACTATATACCTTTG CTAGACTGCGCAATGCTCCCCTAATGGGGACGCGCGACATCACGCTGTGG TAAATATGAAAGAATGAGACTCTTACCATATACCGTTGCCTCGTTTGCAG GTGGATCTGGTGAAGCACGATCAAGCGATGGTACAGCACGAACAGATCCG GAAGTTCGTTGCCGGCACTGTGGCAAACGACGCGCCCGTAATCCCCATCA GCGCGGTTCTCAAGTACAACATCGATGTCGTGTGCGAGTACATTCATTGC AAGATCCCCATCCCA
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Coding sequence (CDS) from alignment at H-elongata_contig76954:439..2703+

>mRNA_H-elongata_contig76954.15365.1 ID=mRNA_H-elongata_contig76954.15365.1|Name=mRNA_H-elongata_contig76954.15365.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1164bp|location=Sequence derived from alignment at H-elongata_contig76954:439..2703+ (Himanthalia elongata Himel1 dioecious)
GTGTGTACACAGACCGTTCGCTTCAAGAACGAACTAGAGCGCAACATCAC
GATTAAGCTGGGCTATGCGAACGCCAAGATCTACAAGGCCGTGCAGGGCG
CCGTGCCAGGACCCGGAAACTTCAGGTGTGTACACAGACCGTTCGCTTCA
AGAACGAACTAGAGCGCAACATCACGATTAAGCTGGGCTATGCGAACGCC
AAGATCTACAAGGCCGTGCAGGGCGCCGTGCCAGGACCCGGAAACTTCAG
GTCTAAGGGTAGTCATCACGCAGATCGCTTCGAGGAGGATGGCAAGACAT
GGGAGCTGCAGAGGCACGTCTCCTTCGTTGATTGTCCCGGGCACGATATC
CTCATGGCCACCATGCTCAATGGCGCGGCGGTCTAAGGGTAGTCATCACG
CAGATCGCTTCGAGGAGGATGGCAAGACATGGGAGCTGCAGAGGCACGTC
TCCTTCGTTGATTGTCCCGGGCACGATATCCTCATGGCCACCATGCTCAA
TGGCGCGGCGGTGATGGACGCGGCGTTGCTGCTCGTCGCGGGGAACGAGA
CATGTCCGCAGCCTCAGACGAGCGAGCACTTAGCCGCCGTGGAGATCATG
CGCCTCAAGAACATCATCATTCTCCAGAACAAGGCGAGCGAGTCTCGCGA
GTTTTGCCTCTTAAGTATGTCCGTGATGGACGCGGCGTTGCTGCTCGTCG
CGGGGAACGAGACATGTCCGCAGCCTCAGACGAGCGAGCACTTAGCCGCC
GTGGAGATCATGCGCCTCAAGAACATCATCATTCTCCAGAACAAGGCGAG
CGAGTCTCGCGAGTTTTGCCTCTTAAGTATGTCCGTGGATCTGGTGAAGC
ACGATCAAGCGATGGTACAGCACGAACAGATCCGGAAGTTCGTTGCCGGC
ACTGTGGCAAACGACGCGCCCGTAATCCCCATCAGCGCGGTTCTCAAGTA
CAACATCGATGTCGTGTGCGAGTACATTCATTGCAAGATCCCCATCCCAG
TGGATCTGGTGAAGCACGATCAAGCGATGGTACAGCACGAACAGATCCGG
AAGTTCGTTGCCGGCACTGTGGCAAACGACGCGCCCGTAATCCCCATCAG
CGCGGTTCTCAAGTACAACATCGATGTCGTGTGCGAGTACATTCATTGCA
AGATCCCCATCCCA
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