mRNA_H-elongata_contig76892.15359.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig76892.15359.1 vs. uniprot
Match: D7FSJ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSJ4_ECTSI) HSP 1 Score: 298 bits (762), Expect = 1.340e-93 Identity = 172/273 (63.00%), Postives = 201/273 (73.63%), Query Frame = 1
Query: 1 WSIYILGPTGVRQKVAFPFCLINSPETS-LSGVSPGINHLRPGWVLAESMYTIIRNEEKYRRRASAR-----RNRVDWPIFRPSTIKLMADARARLVAAGAEKVDTYIGDRDVAGLGKNYMTEASRLEGIAAYTLHLRRYALRGLLLRLEASEPSADLGLSSLSGPSGSTGGSRDDKCQGGVGRMPPPESNALETARLLTLGESWPPCLGAADGSGNGEGEEWDLQRSFLAAEYGAWETSAKSLLEELIAIEAEVAKAVETSKAKDDRRGSQV 801
+S+ G T + Q+VAFPFCLINS E + L GVSPG+NHLRPGWVL+ESMY +IR+E+KYRRRA AR RNRVDWP+FRPS ++LMADARARLVAAG K + Y+GDR VAGLGKNYMTEASRLEGIA YTLHLRRYALRGLL RLE + D L L GP+ T G+ D GGV RMPPP NALETARLLTL + + G+ G W+LQ+S L +E+G E L+++LIAIEAEVAKAVE SKAKDD+RGSQV
Sbjct: 344 FSVIGSGVTCLPQRVAFPFCLINSQEQAGLPGVSPGLNHLRPGWVLSESMYMVIRSEDKYRRRAKARQEHSRRNRVDWPVFRPSMMRLMADARARLVAAGLNKREVYVGDRGVAGLGKNYMTEASRLEGIATYTLHLRRYALRGLLSRLE-EQSGTDRFL--LQGPAKPTWGNGDGNDGGGVCRMPPPVGNALETARLLTLEQQQQQQXXWSSVGGDDGG--WELQKSLLVSEFGEEERGFIDLMQKLIAIEAEVAKAVEISKAKDDKRGSQV 611
BLAST of mRNA_H-elongata_contig76892.15359.1 vs. uniprot
Match: A0A6H5K4J9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4J9_9PHAE) HSP 1 Score: 185 bits (470), Expect = 6.390e-51 Identity = 93/134 (69.40%), Postives = 108/134 (80.60%), Query Frame = 1
Query: 1 WSIYILGPTGVRQKVAFPFCLINSPETS-LSGVSPGINHLRPGWVLAESMYTIIRNEEKYRRRASARRNRVDWPIFRPSTIKLMADARARLVAAGAEKVDTYIGDRDVAGLGKNYMTEASRLEGIAAYTLHLRR 399
+S+ G T + Q+VAFPFCLINS E + L GVSPG+NHLRPGWVL+ESMY +IR+E+K RNRVDWP+FRPS ++LMADARARLVAAG K + Y+GDR VAGLGKNYMTEASRLEGIA YTLHLRR
Sbjct: 497 FSVIGSGVTCLPQRVAFPFCLINSQEEAGLPGVSPGLNHLRPGWVLSESMYMVIRSEDK--------RNRVDWPVFRPSMMRLMADARARLVAAGLNKTEIYVGDRGVAGLGKNYMTEASRLEGIATYTLHLRR 622
BLAST of mRNA_H-elongata_contig76892.15359.1 vs. uniprot
Match: A0A835Z3E2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3E2_9STRA) HSP 1 Score: 175 bits (443), Expect = 5.050e-47 Identity = 118/279 (42.29%), Postives = 153/279 (54.84%), Query Frame = 1
Query: 1 WSIYILGPTGVRQKVAFPFCLINSPETSLSGVSPGINHLRPGWVLAESMYTIIRNEEKYRRRASARRNRVDWPIFRPSTIKLMADARARLVAAG---AEKVDTYIGDRDVAGLGKNYMTEASRLEGIAAYTLHLRRYALRGLLLRLEASEPSADLGLSSLSGPSGSTGGSRDDKCQGGVGRMPPPESNALETARLLTLGESWPPCLGAADGS-----GNGEGEEWDLQRSFLAAEYGA----WETSAKSLLEELIAIEAEVAKAVETSKAKDDRRGSQV 801
+S+ G T + Q+VA PF LI P T+ G + G+N L P WVL +SMY+I+RN KYR R+ A RV W IFR ST++LM AR G K Y+GD +AGLGKN MTEA R +G AAYT+H+RRYAL GLL LE + ++ +G +G+ + Q +PPP + L +R L PP G A S GE +EWD QR+ L E+GA WE K +L EL A A V V SK +DD+RG+QV
Sbjct: 324 YSVVAAGATCLPQRVALPFSLIAPPLTAFPGAALGLNQLHPAWVLTQSMYSIVRNAAKYRSRSRALHTRVGWDIFRRSTVQLMVHARDAANGGGDTAVPKDHAYVGDAQMAGLGKNIMTEADRRKGEAAYTMHIRRYALTGLLRWLEGRIAAR---AAAAAGDAGANADAAAPPLQ-----LPPPTTMLLHVSRELPQ----PPPTGEAQLSTIFEQALGEEDEWDFQRAVLGYEFGAAMETWE-GIKGVLLELKAAAAAVXXXVAASKGRDDKRGAQV 589
BLAST of mRNA_H-elongata_contig76892.15359.1 vs. uniprot
Match: A0A849ZQK4_9BACT (DUF4954 family protein n=1 Tax=Candidatus Sumerlaeia bacterium TaxID=2715255 RepID=A0A849ZQK4_9BACT) HSP 1 Score: 146 bits (368), Expect = 1.940e-36 Identity = 96/267 (35.96%), Postives = 138/267 (51.69%), Query Frame = 1
Query: 1 WSIYILGPTGVRQKVAFPFCLINSPETSLSGVSPGINHLRPGWVLAESMYTIIRNEEKYRRRASARRNRVDWPIFRPSTIKLMADARARLVAAGAEKVDTYIGDRDVAGLGKNYMTEASRLEGIAAYTLHLRRYALRGLLLRLEASEPSADLGLSSLSGPSGSTGGSRDDKCQGGVGRMPPPESNALETARLLTLGESWPPCLGAADGSGNGEGEEWDLQRSFLAAEYGAWETSAKSLLEELIAIEAEVAKAVETSKAKDDRRGSQV 801
+S+ + Q+V PF LIN+P + G+SP N + PGWVL+++++ + RNE KY +R A+R ++ + +FRP I LM +AR RL AA ++V T D++V GLGKNYMTE +R GI AYT +LR YAL GL R A++ DL + + G R W+ +R L AE+ E K LL EL++++ +AKAVETSKAKDD+RG++V
Sbjct: 389 YSLIATAVNALPQRVEMPFSLINTPAERIDGISPAYNEIMPGWVLSDNIFAVKRNEGKYAKRNKAKRAKIVFEVFRPEIIDLMIEARKRLQAATGKEVYT---DKEVKGLGKNYMTEVARKRGIEAYTFYLRYYALCGL--RAAAAKGKVDL------------------EAKSGDAR--------------------------------------WEHERQVLLAEFT--ERDVKRLLRELVSMQETIAKAVETSKAKDDQRGARV 592
BLAST of mRNA_H-elongata_contig76892.15359.1 vs. uniprot
Match: A0A1V4RJQ2_9BACT (Uncharacterized protein n=1 Tax=Candidatus Latescibacteria bacterium 4484_181 TaxID=1956174 RepID=A0A1V4RJQ2_9BACT) HSP 1 Score: 140 bits (354), Expect = 3.750e-36 Identity = 69/144 (47.92%), Postives = 96/144 (66.67%), Query Frame = 1
Query: 1 WSIYILGPTGVRQKVAFPFCLINSPETSLSGVSPGINHLRPGWVLAESMYTIIRNEEKYRRRASARRNRVDWPIFRPSTIKLMADARARLVAAGAEKVDTYIGDRDVAGLGKNYMTEASRLEGIAAYTLHLRRYALRGLLLRLE 432
+SI+ +G + QK+ FPF LIN+P GVSP N +RP W+L ++MYT+ RNEEK+++R A+R D+ +FRP + LM DAR RL+ E D Y D+D+ GLGKNYM E SRL+ I AYT +++ YAL GL ++E
Sbjct: 96 YSIFAMGVNALAQKLTFPFSLINTPAAVYKGVSPAYNEIRPAWLLTDNMYTLRRNEEKFKKRNKAKRTTFDFDVFRPHIVDLMIDARNRLLEV-TEVKDLYT-DKDIRGLGKNYMLEESRLKAIEAYTFYIKYYALLGLKRKVE 237
BLAST of mRNA_H-elongata_contig76892.15359.1 vs. uniprot
Match: A0A496SZ13_9BACT (Uncharacterized protein n=3 Tax=Bacteria TaxID=2 RepID=A0A496SZ13_9BACT) HSP 1 Score: 140 bits (354), Expect = 1.810e-34 Identity = 69/144 (47.92%), Postives = 96/144 (66.67%), Query Frame = 1
Query: 1 WSIYILGPTGVRQKVAFPFCLINSPETSLSGVSPGINHLRPGWVLAESMYTIIRNEEKYRRRASARRNRVDWPIFRPSTIKLMADARARLVAAGAEKVDTYIGDRDVAGLGKNYMTEASRLEGIAAYTLHLRRYALRGLLLRLE 432
+SI+ +G + QK+ FPF LIN+P GVSP N +RP W+L ++MYT+ RNEEK+++R A+R D+ +FRP + LM DAR RL+ E D Y D+D+ GLGKNYM E SRL+ I AYT +++ YAL GL ++E
Sbjct: 390 YSIFAMGVNALAQKLTFPFSLINTPAAVYKGVSPAYNEIRPAWLLTDNMYTLRRNEEKFKKRNKAKRTTFDFDVFRPHIVDLMIDARNRLLEV-TEVKDLYT-DKDIRGLGKNYMLEESRLKAIEAYTFYIKYYALLGLKRKVE 531
BLAST of mRNA_H-elongata_contig76892.15359.1 vs. uniprot
Match: A0A0S8J094_9BACT (Uncharacterized protein n=2 Tax=unclassified Planctomycetes TaxID=473814 RepID=A0A0S8J094_9BACT) HSP 1 Score: 138 bits (348), Expect = 1.180e-33 Identity = 73/150 (48.67%), Postives = 96/150 (64.00%), Query Frame = 1
Query: 1 WSIYILGPTGVRQKVAFPFCLINSPETSLSGVSPGINHLRPGWVLAESMYTIIRNEEKYRRRASARRNRVDWPIFRPSTIKLMADARARLVAAGAEKVDTYIGDRDVAGLGKNYMTEASRLEGIAAYTLHLRRYALRGLLLRLEASEPSA 450
++I G + QKV FPF LIN+P S G+SP N + PGWVL+++++TI RNE KY+ R ARR + +FRP T+ LM D R RL AE + Y DRD++GLGKNYM E SR++ I YT ++R YAL GL R+E S SA
Sbjct: 385 YAIIASGVATLPQKVTFPFSLINAPAQSYPGISPAYNEIMPGWVLSDNIFTIRRNEGKYKDRNKARRTEFIFDVFRPDTVDLMLDGRKRLSDV-AEPQELYT-DRDISGLGKNYMLEHSRVKAIETYTFYIRYYALLGLKSRIETSSKSA 532
BLAST of mRNA_H-elongata_contig76892.15359.1 vs. uniprot
Match: A0A836RJL8_9PLAN (DUF4954 family protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A836RJL8_9PLAN) HSP 1 Score: 132 bits (333), Expect = 5.380e-32 Identity = 69/145 (47.59%), Postives = 91/145 (62.76%), Query Frame = 1
Query: 1 WSIYILGPTGVRQKVAFPFCLINSPETSLSGVSPGINHLRPGWVLAESMYTIIRNEEKYRRRASARRNRVDWPIFRPSTIKLMADARARLVAAGAEKVDTYIGDRDVAGLGKNYMTEASRLEGIAAYTLHLRRYALRGLLLRLEA 435
+SI G T + Q+V FPF LINSP + G+SP N + PGWVL+ ++YT+ RNE KY R ARR + ++ +FRP T+ LM DA RL A ++ DRD+ GLGKNYM EA R I AY ++R YAL L+ R+EA
Sbjct: 261 YSILASGVTTLPQRVTFPFSLINSPAEVIEGISPAYNEIIPGWVLSNNIYTLKRNEGKYAARNKARRTKFNFSVFRPDTVALMRDACRRLEAV--QETKPVYTDRDIPGLGKNYMREAVRQPAIEAYRFYIRYYALMALMNRVEA 403
BLAST of mRNA_H-elongata_contig76892.15359.1 vs. uniprot
Match: H3H1Y3_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H1Y3_PHYRM) HSP 1 Score: 130 bits (327), Expect = 1.080e-31 Identity = 71/158 (44.94%), Postives = 99/158 (62.66%), Query Frame = 1
Query: 1 WSIYILGPTGVRQKVAFPFCLINSPETSLSGVSPGINHLRPGWVLAESMYTIIRNEEKYRRRASARRNRVDWPIFRPSTIKLMADARARLVAA-GAEKV------DTYIGDRDVAGLGKNYMTEASRLEGIAAYTLHLRRYALRGLLLRLEASEPSAD 453
+S+ + Q VA PF LIN+P +S +SP IN + PGWVL+ S++T++RNE+K+R R ++R +++ IFRP ++ M DAR L AA G K+ D Y D+ V GLGKNYM E+SR GIAAYT ++ YAL LL +E+ SAD
Sbjct: 176 YSVIATAVNTLPQLVAMPFALINTPGHIISSLSPAINEISPGWVLSSSVFTVLRNEDKFRSRNKSKRTQIEAEIFRPEIVQYMKDARTELAAAEGNAKMSLANGEDVYT-DKQVRGLGKNYMRESSRRAGIAAYTFFIQLYALDALLPLVESGRVSAD 332
BLAST of mRNA_H-elongata_contig76892.15359.1 vs. uniprot
Match: A0A6A3F5H9_9STRA (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3F5H9_9STRA) HSP 1 Score: 132 bits (333), Expect = 1.350e-31 Identity = 69/157 (43.95%), Postives = 99/157 (63.06%), Query Frame = 1
Query: 1 WSIYILGPTGVRQKVAFPFCLINSPETSLSGVSPGINHLRPGWVLAESMYTIIRNEEKYRRRASARRNRVDWPIFRPSTIKLMADARARLVAA-GAEKVDTYIG-----DRDVAGLGKNYMTEASRLEGIAAYTLHLRRYALRGLLLRLEASEPSAD 453
+S+ + Q VA PF LIN+P ++ +SP IN + PGWVL+ S++T++RNE+K+R R ++R ++ IFRP ++ M DAR+ L AA G K+ G D+ V GLGKNYM E+SR GIAAYT ++ YA+ LLL +E+ SAD
Sbjct: 385 YSVIATAVNTLPQLVAMPFALINTPAHVIASLSPAINEISPGWVLSSSVFTVLRNEDKFRSRNKSKRTHIEAAIFRPEIVQYMKDARSELAAAEGKAKISLPNGEAVYTDKQVRGLGKNYMRESSRQAGIAAYTFFIKLYAVEALLLLVESGRISAD 541 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig76892.15359.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig76892.15359.1 >prot_H-elongata_contig76892.15359.1 ID=prot_H-elongata_contig76892.15359.1|Name=mRNA_H-elongata_contig76892.15359.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=267bp WSIYILGPTGVRQKVAFPFCLINSPETSLSGVSPGINHLRPGWVLAESMYback to top mRNA from alignment at H-elongata_contig76892:188..2504- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig76892.15359.1 ID=mRNA_H-elongata_contig76892.15359.1|Name=mRNA_H-elongata_contig76892.15359.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2317bp|location=Sequence derived from alignment at H-elongata_contig76892:188..2504- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig76892:188..2504- >mRNA_H-elongata_contig76892.15359.1 ID=mRNA_H-elongata_contig76892.15359.1|Name=mRNA_H-elongata_contig76892.15359.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1602bp|location=Sequence derived from alignment at H-elongata_contig76892:188..2504- (Himanthalia elongata Himel1 dioecious)back to top |