mRNA_H-elongata_contig76881.15358.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig76881.15358.1 vs. uniprot
Match: D7FRJ8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRJ8_ECTSI) HSP 1 Score: 329 bits (844), Expect = 1.050e-109 Identity = 162/193 (83.94%), Postives = 172/193 (89.12%), Query Frame = 1
Query: 7 VLKRLGKALEQHPEYFAADEIFRPGNMVDYLLTQTAPDGKTVSITRLWEVVMYGFEAMWPAGRTELDGRGMGDVWEHSALPDDGSGWSRLVPFHKLSQWMTYSLMETLQQDAGLVLTDMGLMTGLPEYRNGGLLLDLGLLEAKHAGVTGEPHRPEEEVIVEWRALTVCLLDEVADALRKKLGKTVEEFPLVKV 585
VLKRLG ALEQHP +F A IFRPGNMVDYLL Q + D KTVSIT++WEVVMYGFEAMWPAGRTELDGR MGDVWEHSALPDDGSGWS LVPFHKLSQWMTYSLME LQ AGLVLT+ LMTGLPEYRNGGLLLD+GLLEAKH GVTG+ H PEEEVIVEWRALTVCLLDEVA ALR+KLGKT +EFPLVK+
Sbjct: 205 VLKRLGTALEQHPVFFEAGGIFRPGNMVDYLLAQASDDSKTVSITKVWEVVMYGFEAMWPAGRTELDGRSMGDVWEHSALPDDGSGWSNLVPFHKLSQWMTYSLMEPLQA-AGLVLTETELMTGLPEYRNGGLLLDMGLLEAKHPGVTGQAHGPEEEVIVEWRALTVCLLDEVAAALRQKLGKTEKEFPLVKM 396
BLAST of mRNA_H-elongata_contig76881.15358.1 vs. uniprot
Match: A0A835ZFF8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFF8_9STRA) HSP 1 Score: 270 bits (691), Expect = 1.320e-86 Identity = 131/195 (67.18%), Postives = 158/195 (81.03%), Query Frame = 1
Query: 7 VLKRLGKALEQHPEYFAADEIFRPGNMVDYLLTQTAPDGKTVSITRLWEVVMYGFEAMWPA--GRTELDGRGMGDVWEHSALPDDGSGWSRLVPFHKLSQWMTYSLMETLQQDAGLVLTDMGLMTGLPEYRNGGLLLDLGLLEAKHAGVTGEPHRPEEEVIVEWRALTVCLLDEVADALRKKLGKTVEEFPLVKV 585
VLKRLG AL QHP+YF + +FRPGNMVDYL Q DG +VS+T LWEVVMYGFEAMWPA GR LDGR MGDVW+HSALP+DG+ W +L+PFHKLSQW+T+SLME L + AG+ L + LMTGLPEYRNGGLL+D+G+LE ++ V +PH P+EEVIVEWRALTV LLDE+ ALR K+G++ EEFPLVK+
Sbjct: 202 VLKRLGSALLQHPQYFEREGLFRPGNMVDYLFAQAGEDG-SVSLTSLWEVVMYGFEAMWPADGGRVSLDGRSMGDVWKHSALPEDGTNWGQLIPFHKLSQWLTFSLMEPLMR-AGMKLKNTTLMTGLPEYRNGGLLVDMGVLEPQYPEVVSKPHTPDEEVIVEWRALTVALLDEIYAALRAKIGQSEEEFPLVKM 394
BLAST of mRNA_H-elongata_contig76881.15358.1 vs. uniprot
Match: W7TK87_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TK87_9STRA) HSP 1 Score: 213 bits (541), Expect = 1.560e-63 Identity = 125/222 (56.31%), Postives = 146/222 (65.77%), Query Frame = 1
Query: 7 VLKRLGKALEQHPEYFA-------ADE-----IFRPGNMVDYLLTQTAP--DGKTVSITRLWEVVMYGFEAMWPAGRTELDGRGMGDVWEHSALP---------DDGSGWSR-----LVPFHKLSQWMTYSLMETLQQDAGLVLTDMGLMTGLPEYRNGGLLLDLGLLEAKHAGVTGEP-HRPEEEVIVEWRALTVCLLDEVADALRKKLGKTVEEFPLVKV 585
+L+RLGKALE+HPE+F+ ADE IFRPG +VDYL Q P D +V + LW VVM G E++WPAGRT + GR MGDVW HSAL D G G + LVPFHKLSQW+TYSLME L + AGL LT+ MTGLPEYRNGGL +DLG+LEAK + H P EVIVEWRALTV LLDEVA LR+KLG + + PLVKV
Sbjct: 225 LLRRLGKALEEHPEFFSSRLASKGADEDGGAEIFRPGYLVDYLFAQANPGTDPASVPVHDLWRVVMDGLESIWPAGRTSVGGRPMGDVWPHSALALGGKVAEEGDGGLGEEKEAGACLVPFHKLSQWLTYSLMEPLAE-AGLALTETRHMTGLPEYRNGGLFVDLGVLEAKRPELLDPAGHAPGSEVIVEWRALTVVLLDEVARRLREKLGASEKSLPLVKV 445
BLAST of mRNA_H-elongata_contig76881.15358.1 vs. uniprot
Match: A0A5D6Y127_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y127_9STRA) HSP 1 Score: 207 bits (528), Expect = 3.040e-62 Identity = 108/195 (55.38%), Postives = 134/195 (68.72%), Query Frame = 1
Query: 7 VLKRLGKALEQHPEYFAAD--EIFRPGNMVDYLLTQTAPDGKTVSITRLWEVVMYGFEAMWPAGRTELDGRGMGDVWEHSALPDDGSGWSRLVPFHKLSQWMTYSLMETLQQDAGLVLTDMGLMTGLPEYRNGGLLLDLGLLEAKHAGVTGEPHRPEEEVIVEWRALTVCLLDEVADALRKKLGKTVEEFPLVKV 585
+LKRLG++L+ HPE+FA RPGN+VDYLL + VSIT LW VV+YG + +WP RT L G+ MGDVWE S LP+D + V FHKLSQW+TYSLME LQ D G +TD+GLMTGLPEYRNGGLL+D G+L K + + P EVI+EWRALTV LLDE+ + ++L T E FPLVK+
Sbjct: 193 LLKRLGQSLKAHPEFFAGTVGSSNRPGNLVDYLLKHKNEQNE-VSITELWRVVVYGLQDIWPDSRTRLGGQNMGDVWELSYLPEDEKA-GKFVSFHKLSQWLTYSLMEPLQ-DYGFKITDLGLMTGLPEYRNGGLLVDFGVLIPKDGKILTDEFEPSSEVIIEWRALTVALLDEIHKVILERLSFTAEAFPLVKM 384
BLAST of mRNA_H-elongata_contig76881.15358.1 vs. uniprot
Match: H3GZ97_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GZ97_PHYRM) HSP 1 Score: 206 bits (525), Expect = 5.400e-62 Identity = 106/191 (55.50%), Postives = 135/191 (70.68%), Query Frame = 1
Query: 16 RLGKALEQHPEYFA-ADEIFRPGNMVDYLLTQTAPDGKTVSITRLWEVVMYGFEAMWPAGRTELDGRGMGDVWEHSALPDDGSGWSRLVPFHKLSQWMTYSLMETLQQDAGLVLTDMGLMTGLPEYRNGGLLLDLGLLEAKHAGVTGEPHRPEEEVIVEWRALTVCLLDEVADALRKKLGKTVEEFPLVKV 585
RLGK++ ++PE+F AD RPGNMVDYL + G+ VSIT LW+VV+YG + +WP RT + G+ MGDVWE S LP+ + V FHKLSQW+TYSLME LQ DAG +TD+ LMTGLPEYRNGGLL+D G+L K A + + P EVI+EWRALTV +LDE+ + ++LG T E FPLVK+
Sbjct: 179 RLGKSISKYPEFFTGADGSIRPGNMVDYLTKRQNASGE-VSITELWKVVLYGLQDIWPESRTRIGGQNMGDVWELSYLPEHEKA-GKFVSFHKLSQWLTYSLMEPLQ-DAGFKITDLKLMTGLPEYRNGGLLVDFGVLVPKSANILTDEFDPSTEVIIEWRALTVAILDELHKVILERLGFTAEFFPLVKM 366
BLAST of mRNA_H-elongata_contig76881.15358.1 vs. uniprot
Match: W2QCQ7_PHYPN (Uncharacterized protein n=20 Tax=Phytophthora TaxID=4783 RepID=W2QCQ7_PHYPN) HSP 1 Score: 207 bits (528), Expect = 8.860e-62 Identity = 107/194 (55.15%), Postives = 137/194 (70.62%), Query Frame = 1
Query: 7 VLKRLGKALEQHPEYF-AADEIFRPGNMVDYLLTQTAPDGKTVSITRLWEVVMYGFEAMWPAGRTELDGRGMGDVWEHSALPDDGSGWSRLVPFHKLSQWMTYSLMETLQQDAGLVLTDMGLMTGLPEYRNGGLLLDLGLLEAKHAGVTGEPHRPEEEVIVEWRALTVCLLDEVADALRKKLGKTVEEFPLVKV 585
+LK LGK++ +PE+F AD RPGNMVDYL G+ VSIT LW+VV+YG + +WPA RT++DG+ MGDVWE S LP+ + V FHKLSQW+TYSLME LQ DAG +TD+ LMTGLPEYRNGGLL+D G+L K A + + P EVI+EWRALTV +LDE+ + ++L T + FPLVK+
Sbjct: 238 LLKGLGKSIANYPEFFKGADGSIRPGNMVDYLTKHQNSSGE-VSITDLWKVVLYGLQDIWPASRTQIDGQNMGDVWELSYLPEHEKA-GKFVSFHKLSQWLTYSLMEPLQ-DAGFKITDLKLMTGLPEYRNGGLLVDFGVLVPKSASILTDEFDPSTEVIIEWRALTVAILDELHKVILERLNFTADFFPLVKM 428
BLAST of mRNA_H-elongata_contig76881.15358.1 vs. uniprot
Match: UPI0019F3A3BD (URC4/urg3 family protein n=1 Tax=Synechococcales cyanobacterium T60_A2020_003 TaxID=2774349 RepID=UPI0019F3A3BD) HSP 1 Score: 206 bits (524), Expect = 1.120e-61 Identity = 110/195 (56.41%), Postives = 143/195 (73.33%), Query Frame = 1
Query: 1 MKVLKRLGKALEQHPEYFAADEIFRPGNMVDYLLTQTAPDGKTVSITRLWEVVMYGFEAMWPAGRTELDGRGMGDVWEHSALPDDGSGWSRLVPFHKLSQWMTYSLMETLQQDAGLVLTDMGLMTGLPEYRNGGLLLDLGLLEAKHAGVTGEPHRPEEEVIVEWRALTVCLLDEVADALRKKLGKTVEEFPLVKV 585
+++L +LG+A+ Q+P F + RPGN+VDYL+TQ A DGK ++ T ++ VM GF ++WP GR + G +GDVW HS+LPD G G S+LVP HKLSQW+TYSL+E LQ D GL +TD+ +TGL EYRNGGL +D+GLL+ KH GV G+ H P EVIVEWRALTV LLD +A ALR +LG+ + PLVKV
Sbjct: 194 VQLLNQLGRAIAQNPGLFPGT-LPRPGNLVDYLVTQ-ATDGK-LAATTVFRAVMEGFGSIWP-GRVAIAGVNLGDVWPHSSLPDTGIG-SQLVPLHKLSQWLTYSLLEPLQ-DLGLTITDLDQLTGLAEYRNGGLCVDMGLLQPKHDGVLGDRHLPSSEVIVEWRALTVVLLDRIAAALRAQLGQDETQLPLVKV 382
BLAST of mRNA_H-elongata_contig76881.15358.1 vs. uniprot
Match: D0MYM3_PHYIT (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=D0MYM3_PHYIT) HSP 1 Score: 206 bits (523), Expect = 1.740e-61 Identity = 106/194 (54.64%), Postives = 136/194 (70.10%), Query Frame = 1
Query: 7 VLKRLGKALEQHPEYFA-ADEIFRPGNMVDYLLTQTAPDGKTVSITRLWEVVMYGFEAMWPAGRTELDGRGMGDVWEHSALPDDGSGWSRLVPFHKLSQWMTYSLMETLQQDAGLVLTDMGLMTGLPEYRNGGLLLDLGLLEAKHAGVTGEPHRPEEEVIVEWRALTVCLLDEVADALRKKLGKTVEEFPLVKV 585
+LKRLGK++ +PE+F+ AD RPGNMVDYL G+ VS+T LW+ V+ G + +WPA RT++DG+ MGDVWE S LP+ + V FHKLSQWMTYSLME LQ DAG +TD+ LMTGLPEYRNGGLL+D G+L K A + + P EVI+EWRALTV +LDE+ + +L T + FPLVK+
Sbjct: 195 LLKRLGKSISNYPEFFSGADGSIRPGNMVDYLTKHQNASGE-VSVTDLWKAVLNGLQDIWPASRTQIDGQNMGDVWELSYLPEHEKA-GKFVSFHKLSQWMTYSLMEPLQ-DAGFKITDLKLMTGLPEYRNGGLLVDFGVLVPKSANILTDEFDPSTEVIIEWRALTVAILDELHKVILGRLNFTADLFPLVKM 385
BLAST of mRNA_H-elongata_contig76881.15358.1 vs. uniprot
Match: A0A3M6V864_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6V864_9STRA) HSP 1 Score: 202 bits (515), Expect = 3.940e-60 Identity = 103/194 (53.09%), Postives = 136/194 (70.10%), Query Frame = 1
Query: 7 VLKRLGKALEQHPEYF-AADEIFRPGNMVDYLLTQTAPDGKTVSITRLWEVVMYGFEAMWPAGRTELDGRGMGDVWEHSALPDDGSGWSRLVPFHKLSQWMTYSLMETLQQDAGLVLTDMGLMTGLPEYRNGGLLLDLGLLEAKHAGVTGEPHRPEEEVIVEWRALTVCLLDEVADALRKKLGKTVEEFPLVKV 585
+LKRLGK++ +PE+F D RPGNMVDYL+ DG+ +SIT LW+VV++G + +WP RT + G+ MGDVWE S LP+ + V FHKLSQW+TYSLME LQ DAG +TD+ LMTGLPEYRNGGLL+D G+L K + + + P EVI+EWRALTV +LDE+ + +KL + + FPLVK+
Sbjct: 210 LLKRLGKSITNYPEFFMGTDGSIRPGNMVDYLMKHQNTDGE-ISITDLWKVVLHGLQDIWPESRTRIGGQNMGDVWELSYLPEHEKA-GKFVSFHKLSQWLTYSLMEPLQ-DAGFKITDLKLMTGLPEYRNGGLLVDFGVLVPKSSNILTDEFDPSTEVIIEWRALTVAILDELHKVILQKLDFSADFFPLVKM 400
BLAST of mRNA_H-elongata_contig76881.15358.1 vs. uniprot
Match: G4YF62_PHYSP (Uncharacterized protein n=5 Tax=Phytophthora TaxID=4783 RepID=G4YF62_PHYSP) HSP 1 Score: 202 bits (513), Expect = 5.440e-60 Identity = 103/194 (53.09%), Postives = 136/194 (70.10%), Query Frame = 1
Query: 7 VLKRLGKALEQHPEYFAADE-IFRPGNMVDYLLTQTAPDGKTVSITRLWEVVMYGFEAMWPAGRTELDGRGMGDVWEHSALPDDGSGWSRLVPFHKLSQWMTYSLMETLQQDAGLVLTDMGLMTGLPEYRNGGLLLDLGLLEAKHAGVTGEPHRPEEEVIVEWRALTVCLLDEVADALRKKLGKTVEEFPLVKV 585
+LKRLGK++ +PE+F ++ RPGN+VDYL G+ VSIT+LW+VV+YG + +WP RT + G+ MGDVWE S LP+ +LV FHKLSQW+TYSLME LQ DAG +TD+ LMTGLPEYRNGGLL+D G+L K + + P EVI+EWRALTV +LDE+ + ++L T + FPLVK+
Sbjct: 195 LLKRLGKSIANYPEFFQGEDGSIRPGNVVDYLKKHQNASGE-VSITQLWKVVLYGLQDIWPESRTRIGGQNMGDVWELSYLPEHEKA-GKLVSFHKLSQWLTYSLMEPLQ-DAGFKITDLKLMTGLPEYRNGGLLVDFGVLVPKSPNILTDEFDPSTEVIIEWRALTVAILDELHKVILERLNFTADFFPLVKM 385 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig76881.15358.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig76881.15358.1 >prot_H-elongata_contig76881.15358.1 ID=prot_H-elongata_contig76881.15358.1|Name=mRNA_H-elongata_contig76881.15358.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=200bp MKVLKRLGKALEQHPEYFAADEIFRPGNMVDYLLTQTAPDGKTVSITRLWback to top mRNA from alignment at H-elongata_contig76881:105..1954- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig76881.15358.1 ID=mRNA_H-elongata_contig76881.15358.1|Name=mRNA_H-elongata_contig76881.15358.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1850bp|location=Sequence derived from alignment at H-elongata_contig76881:105..1954- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig76881:105..1954- >mRNA_H-elongata_contig76881.15358.1 ID=mRNA_H-elongata_contig76881.15358.1|Name=mRNA_H-elongata_contig76881.15358.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1200bp|location=Sequence derived from alignment at H-elongata_contig76881:105..1954- (Himanthalia elongata Himel1 dioecious)back to top |