mRNA_H-elongata_contig7676.15346.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig7676.15346.1
Unique NamemRNA_H-elongata_contig7676.15346.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig7676.15346.1 vs. uniprot
Match: D7FK61_ECTSI (Efflux ABC transporter, permease/ATP-binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK61_ECTSI)

HSP 1 Score: 485 bits (1249), Expect = 1.680e-166
Identity = 250/302 (82.78%), Postives = 274/302 (90.73%), Query Frame = 1
Query:    1 QVMRALGASERVMDIIRSAEMPMSVET----DNVAAATHTIPNLEIAGGAKLNDRIAGRLVFKDVYFSYPSRPHAPVLGGMTLEVEAGRCLAVVGASGCGKSTVLRLLTRLYDPQSGTIELDGVPLQTLEPRSLRDRVGVVEQEPVLFGGSIADNIRYGRPGASQEDVEAAAAVANASNFIEGFPDGYDTQVGEGGVQISGGQKQRIAIARAVLKDPAIMLLDEATSALDSESEHLVRIALERVTKGRTSLLVAHRLSTVRSMADKICVLNKGKVVEVGTYDELASKPDGHFRRLVQFQMLE 894
            Q+MRALGASERVM II SAE P ++ +    D  +A   +  NLEIAGGA L D +AG +VFKDV+FSYP+RPHAPVLGGMTLEVEAG  LA+VGASGCGKSTVLRLLTRLYDPQSGTIELDGVPL  LEPR LRDRVGVVEQEPVLFGGSIADNIRYGRP AS+ +VEAAAAVANAS+F+EGFPDGYDTQVGEGGVQ+SGGQKQRIAIARAVLKDPAIMLLDEATSALDSESEHLV+ ALERVT+GRTSL+VAHRLSTVRSMA+KICVLNKG+VVE+G+YDELASKPDGHFRRLVQ+QMLE
Sbjct:  334 QIMRALGASERVMAIINSAEAPPAIASSDNQDQDSATRDSAANLEIAGGAALGDTVAGHVVFKDVHFSYPTRPHAPVLGGMTLEVEAGSSLAIVGASGCGKSTVLRLLTRLYDPQSGTIELDGVPLHMLEPRGLRDRVGVVEQEPVLFGGSIADNIRYGRPEASRPEVEAAAAVANASDFVEGFPDGYDTQVGEGGVQMSGGQKQRIAIARAVLKDPAIMLLDEATSALDSESEHLVQAALERVTEGRTSLIVAHRLSTVRSMANKICVLNKGEVVEIGSYDELASKPDGHFRRLVQYQMLE 635          
BLAST of mRNA_H-elongata_contig7676.15346.1 vs. uniprot
Match: A0A835ZGY2_9STRA (Efflux ABC transporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGY2_9STRA)

HSP 1 Score: 298 bits (764), Expect = 4.300e-94
Identity = 165/297 (55.56%), Postives = 210/297 (70.71%), Query Frame = 1
Query:    7 MRALGASERVMDIIRSAEMPMSVETDNVAAATHTIPNLEIAGGAK--LNDRIAGRLVFKDVYFSYPSRPHAPVLGGMTLEVEAGRCLAVVGASGCGKSTVLRLLTRLYDPQSGTIELDGVPLQTLEPRSLRDR-VGVVEQEPVLFGGSIADNIRYGRPGASQEDVEAAAAVANASNFIEGFPDGYDTQVGEGGVQISGGQKQRIAIARAVLKDPAIMLLDEATSALDSESEHLVRIALERVTKGRTSLLVAHRLSTVRSMADKICVLNKGKVVEVGTYDELASKPDGHFRRLVQFQM 888
            MRA+GAS+RVMDIIR AE                    E  GG+   +   + G + F  V F YP+RP   VL G+ LEV+AG+ LAVVG SGCGKST+ RLLTRLY+P +G++ LDGV + +L+   LR++ VG+V+QEPVLF  SIADNIRYGRP A+  +V  AA VANA  FI  F  GY TQ G  G Q+SGGQ+QRIAIARAVLKDPA++LLDE +SALDS+SE  V+ ALE VT+GRTS+++AHRLST R+MADKI V++ G+VVE G++DEL ++  G FRR+   Q+
Sbjct:  294 MRAIGASDRVMDIIRGAE-----------------GEGERGGGSAGAVLAAVRGDIRFDGVQFLYPTRPEHQVLQGLALEVQAGKTLAVVGPSGCGKSTLCRLLTRLYEPSAGSVTLDGVDISSLDVLWLREKAVGIVDQEPVLFNASIADNIRYGRPEATDAEVVQAAKVANAHEFITQFSHGYQTQAGASGQQLSGGQRQRIAIARAVLKDPAVLLLDEFSSALDSDSEQRVQEALEHVTRGRTSIIIAHRLSTARAMADKIAVMDSGRVVESGSFDELMARDGGVFRRMYLTQV 573          
BLAST of mRNA_H-elongata_contig7676.15346.1 vs. uniprot
Match: Q1DDB6_MYXXD (Efflux ABC transporter, permease/ATP-binding protein n=22 Tax=Myxococcaceae TaxID=31 RepID=Q1DDB6_MYXXD)

HSP 1 Score: 294 bits (752), Expect = 2.960e-92
Identity = 164/295 (55.59%), Postives = 209/295 (70.85%), Query Frame = 1
Query:    7 MRALGASERVMDIIRSAEMPMSVETDNVAAATHTIPNLEIAGGAKLNDRIAGRLVFKDVYFSYPSRPHAPVLGGMTLEVEAGRCLAVVGASGCGKSTVLRLLTRLYDPQSGTIELDGVPLQTLEPRSLRDRVGVVEQEPVLFGGSIADNIRYGRPGASQEDVEAAAAVANASNFIEGFPDGYDTQVGEGGVQISGGQKQRIAIARAVLKDPAIMLLDEATSALDSESEHLVRIALERVTKGRTSLLVAHRLSTVRSMADKICVLNKGKVVEVGTYDELASKPDGHFRRLVQFQML 891
            MRA GA+ERV +++           D   A          AGG +L D + G + F+ V+F+YPSRP  PVL G+ LE+  G  +AVVG SG GKST+  LL+R YDPQ+G + LDG PL  LEP  LR  +G+V QEP LF  SIADNIRYGRPGA+   VE AA  ANA  +IE FP+GY TQVGE GVQ+SGGQKQR+AIARAVLKDP +++LDEATSALD+ESEHLV+ ALER+ KGRT+L++AHRLSTV + AD++ VL+ G V++ GT+  L S+ +G +RRLV+ Q +
Sbjct:  314 MRASGAAERVFELL-----------DRKPAIG--------AGGEQLTD-LRGHVQFRGVHFAYPSRPDVPVLQGLDLELRPGEVVAVVGPSGAGKSTLASLLSRFYDPQNGEVLLDGHPLTALEPEWLRRNIGMVAQEPQLFSCSIADNIRYGRPGATDAQVEEAARAANAHAYIERFPEGYGTQVGERGVQLSGGQKQRVAIARAVLKDPRLLILDEATSALDAESEHLVKDALERLMKGRTTLIIAHRLSTVAN-ADRVLVLDGGVVIQSGTHASLMSQ-EGLYRRLVERQFV 586          
BLAST of mRNA_H-elongata_contig7676.15346.1 vs. uniprot
Match: UPI001CCC0483 (ABC transporter transmembrane domain-containing protein n=2 Tax=Archangiaceae TaxID=39 RepID=UPI001CCC0483)

HSP 1 Score: 293 bits (750), Expect = 5.740e-92
Identity = 159/295 (53.90%), Postives = 209/295 (70.85%), Query Frame = 1
Query:    7 MRALGASERVMDIIRSAEMPMSVETDNVAAATHTIPNLEIAGGAKLNDRIAGRLVFKDVYFSYPSRPHAPVLGGMTLEVEAGRCLAVVGASGCGKSTVLRLLTRLYDPQSGTIELDGVPLQTLEPRSLRDRVGVVEQEPVLFGGSIADNIRYGRPGASQEDVEAAAAVANASNFIEGFPDGYDTQVGEGGVQISGGQKQRIAIARAVLKDPAIMLLDEATSALDSESEHLVRIALERVTKGRTSLLVAHRLSTVRSMADKICVLNKGKVVEVGTYDELASKPDGHFRRLVQFQML 891
            MRA GA+ERV +++                     P + I+GG +    I GR+  ++V FSYP+RP  PVL G+ L +E G  +A+VG SG GKST+  +L RLYDP+ G I LDG+ L+TL+P  LR ++GVV QEP+LF  SIADNIRYG+ GAS  +VEAAA  ANA +FI  FPDGY T VGE GVQ+SGGQKQR+AIARAVLKDP +++LDEATSALD+ESEHLV+ AL+R+ KGRT+L++AHRLSTV   AD++ VL  GK+V+ G++  L  + +G +RRLV+ Q +
Sbjct:  312 MRASGAAERVFELLDRQ------------------PAIPISGGERPTS-IQGRVELQEVRFSYPARPDVPVLQGIQLNIEPGEVVAIVGPSGAGKSTIAAMLGRLYDPEGGHILLDGMDLKTLDPEWLRQQIGVVAQEPLLFSSSIADNIRYGKVGASDAEVEAAARAANAHDFISRFPDGYKTLVGERGVQLSGGQKQRVAIARAVLKDPRLLILDEATSALDAESEHLVKDALDRLMKGRTTLIIAHRLSTVMD-ADRVMVLEGGKIVQSGSHSALMGQ-EGLYRRLVERQFV 585          
BLAST of mRNA_H-elongata_contig7676.15346.1 vs. uniprot
Match: A0A085WV65_9DELT (Lipid A export ATP-binding/permease protein MsbA n=1 Tax=Hyalangium minutum TaxID=394096 RepID=A0A085WV65_9DELT)

HSP 1 Score: 293 bits (749), Expect = 8.740e-92
Identity = 162/296 (54.73%), Postives = 209/296 (70.61%), Query Frame = 1
Query:    7 MRALGASERVMDII-RSAEMPMSVETDNVAAATHTIPNLEIAGGAKLNDRIAGRLVFKDVYFSYPSRPHAPVLGGMTLEVEAGRCLAVVGASGCGKSTVLRLLTRLYDPQSGTIELDGVPLQTLEPRSLRDRVGVVEQEPVLFGGSIADNIRYGRPGASQEDVEAAAAVANASNFIEGFPDGYDTQVGEGGVQISGGQKQRIAIARAVLKDPAIMLLDEATSALDSESEHLVRIALERVTKGRTSLLVAHRLSTVRSMADKICVLNKGKVVEVGTYDELASKPDGHFRRLVQFQML 891
            MRA GASERV +++ R   +PMS                   GG +L     GR+  +DV F+YPSRP  PVL G+ L +E G  +A+VG SG GKST+  LL RLYDPQ G I LDG  L+ L+P  LR ++GVV QEP+LF  SIADNIRYGR  A+Q ++EAAA  ANA +FI  FP+GY+T VGE GVQ+SGGQKQR+AIARA+LKDP +++LDEATSALD+ESEHLV+ AL+R+ KGRT+L++AHRLSTV   AD++ VL  GK+V+ G++  L  + DG +RRLV+ Q +
Sbjct:  315 MRAAGASERVFELMDRQPTIPMS-------------------GGERLA-HTEGRVQLQDVRFTYPSRPDVPVLQGIELNIEPGEAVAIVGPSGSGKSTIASLLGRLYDPQGGHILLDGKDLKALDPEWLRQQIGVVAQEPLLFSSSIADNIRYGRADATQAEIEAAAKAANAHDFIMRFPEGYNTLVGERGVQLSGGQKQRVAIARAMLKDPRLLILDEATSALDAESEHLVKEALDRLMKGRTTLIIAHRLSTVMD-ADRVMVLEGGKIVQSGSHSALMGQ-DGLYRRLVERQFV 588          
BLAST of mRNA_H-elongata_contig7676.15346.1 vs. uniprot
Match: A0A3A8NMX7_9DELT (ATP-binding cassette domain-containing protein n=4 Tax=Corallococcus TaxID=83461 RepID=A0A3A8NMX7_9DELT)

HSP 1 Score: 292 bits (748), Expect = 1.200e-91
Identity = 162/295 (54.92%), Postives = 211/295 (71.53%), Query Frame = 1
Query:    7 MRALGASERVMDIIRSAEMPMSVETDNVAAATHTIPNLEIAGGAKLNDRIAGRLVFKDVYFSYPSRPHAPVLGGMTLEVEAGRCLAVVGASGCGKSTVLRLLTRLYDPQSGTIELDGVPLQTLEPRSLRDRVGVVEQEPVLFGGSIADNIRYGRPGASQEDVEAAAAVANASNFIEGFPDGYDTQVGEGGVQISGGQKQRIAIARAVLKDPAIMLLDEATSALDSESEHLVRIALERVTKGRTSLLVAHRLSTVRSMADKICVLNKGKVVEVGTYDELASKPDGHFRRLVQFQML 891
            MRA GA+ERV +++                   TIP    AGG +    + GR+ F+DV F+YPSRP   VL G+ L ++AG  +AVVG+SG GKST+  LL+R YDP  G + LDG PL TL+P  LR  VG+V QEP+LF  SI DNIRYGRPGA+  +VEAAA  A+A +FI  FPDGY T+VGE GVQ+SGGQKQR+AIARAVLKDP I++LDEATSALD+ESEHLV+ ALER+ +GRT+L++AHRLSTV + A ++ VL  G+VV+ GT+  L ++ +G +RRLV+ Q++
Sbjct:  314 MRASGAAERVFELMDREP---------------TIP----AGGGERPATVEGRVEFQDVRFAYPSRPDVTVLQGINLTLQAGEVVAVVGSSGAGKSTLAALLSRFYDPHQGRLLLDGRPLDTLDPAWLRQHVGMVAQEPLLFSCSIGDNIRYGRPGATDAEVEAAAKAAHAHDFIGRFPDGYRTEVGERGVQLSGGQKQRVAIARAVLKDPRILVLDEATSALDAESEHLVKDALERLMQGRTTLIIAHRLSTVAN-AHRVLVLESGRVVQSGTHAALMTQ-EGLYRRLVERQVV 587          
BLAST of mRNA_H-elongata_contig7676.15346.1 vs. uniprot
Match: A0A2W5T7L5_9DELT (ABC transporter permease n=1 Tax=Archangium gephyra TaxID=48 RepID=A0A2W5T7L5_9DELT)

HSP 1 Score: 292 bits (747), Expect = 1.350e-91
Identity = 159/292 (54.45%), Postives = 204/292 (69.86%), Query Frame = 1
Query:   10 RALGASERVMDIIRSAEMPMSVETDNVAAATHTIPNLEIAGGAKLNDRIAGRLVFKDVYFSYPSRPHAPVLGGMTLEVEAGRCLAVVGASGCGKSTVLRLLTRLYDPQSGTIELDGVPLQTLEPRSLRDRVGVVEQEPVLFGGSIADNIRYGRPGASQEDVEAAAAVANASNFIEGFPDGYDTQVGEGGVQISGGQKQRIAIARAVLKDPAIMLLDEATSALDSESEHLVRIALERVTKGRTSLLVAHRLSTVRSMADKICVLNKGKVVEVGTYDELASKPDGHFRRLVQFQ 885
            RA GA+ERV +++                  H  P +   GG +L D + G++ F++V F+YP+RP   VL G TL +E G  +AVVG SG GKST+  LL RLYDP SG + LDGVP   L+P  LR +VGVV QEP LF  SIADNIRYGRP AS  +VE AA +ANA  FI  FP+GY T VGE G+Q+SGGQKQR+AIARA+LK+P I++LDEATSALD+ESEHLVR ALER+ +GRT+L++AHRLSTVR  A ++ VL  G +V+ GT++ L  + +G +RRLV+ Q
Sbjct:  307 RAAGAAERVFELL------------------HRKPGIPADGGRQL-DAVKGQISFQNVTFAYPTRPDTKVLDGFTLALEPGEIVAVVGPSGAGKSTIASLLYRLYDPASGRLSLDGVPFDQLDPEWLRRQVGVVAQEPTLFSTSIADNIRYGRPDASDAEVEEAAKLANAHGFISRFPEGYQTLVGERGIQLSGGQKQRVAIARAILKNPRILILDEATSALDAESEHLVREALERLMQGRTTLVIAHRLSTVRD-AHRVVVLEAGAIVQSGTHERLVVE-EGLYRRLVERQ 577          
BLAST of mRNA_H-elongata_contig7676.15346.1 vs. uniprot
Match: UPI001CED2937 (ABC transporter transmembrane domain-containing protein n=1 Tax=Myxococcus sp. RHSTA-1-4 TaxID=2874601 RepID=UPI001CED2937)

HSP 1 Score: 290 bits (742), Expect = 5.960e-91
Identity = 159/295 (53.90%), Postives = 205/295 (69.49%), Query Frame = 1
Query:    7 MRALGASERVMDIIRSAEMPMSVETDNVAAATHTIPNLEIAGGAKLNDRIAGRLVFKDVYFSYPSRPHAPVLGGMTLEVEAGRCLAVVGASGCGKSTVLRLLTRLYDPQSGTIELDGVPLQTLEPRSLRDRVGVVEQEPVLFGGSIADNIRYGRPGASQEDVEAAAAVANASNFIEGFPDGYDTQVGEGGVQISGGQKQRIAIARAVLKDPAIMLLDEATSALDSESEHLVRIALERVTKGRTSLLVAHRLSTVRSMADKICVLNKGKVVEVGTYDELASKPDGHFRRLVQFQML 891
            MRA GAS+RV +++           D   A         IA G +    + G + F+DV+F+YP+RP  PVL G+ LE+  G  +AVVG SG GKST+  LL+R YDPQ G + LDG PL +L+P  LR  +G+V QEP LF  SIADNIRYGRP A+   +E AA  ANA  FI+ FP+GY TQVGE GVQ+SGGQKQR+AIARAVLKDP +++LDEATSALD+ESEHLV+ ALER+ KGRT+L++AHRLSTV + AD++ VL  G V++ GT+  L  + DG +RRLV+ Q +
Sbjct:  297 MRASGASDRVFELL-----------DREPA---------IAPGGQSLPEVRGHVEFRDVHFAYPTRPDVPVLQGVNLELRPGEVVAVVGPSGAGKSTLASLLSRFYDPQGGAVLLDGHPLTSLDPHWLRRNIGMVAQEPQLFSCSIADNIRYGRPDATDAQIEEAARAANAHAFIQRFPEGYQTQVGERGVQLSGGQKQRVAIARAVLKDPRLLILDEATSALDAESEHLVKDALERLMKGRTTLIIAHRLSTVAN-ADRVLVLEGGHVIQSGTHAALMGQ-DGLYRRLVERQFV 569          
BLAST of mRNA_H-elongata_contig7676.15346.1 vs. uniprot
Match: A0A6I2GXX0_9DELT (ATP-binding cassette domain-containing protein n=2 Tax=Cystobacterineae TaxID=80811 RepID=A0A6I2GXX0_9DELT)

HSP 1 Score: 289 bits (740), Expect = 1.790e-90
Identity = 158/295 (53.56%), Postives = 208/295 (70.51%), Query Frame = 1
Query:    7 MRALGASERVMDIIRSAEMPMSVETDNVAAATHTIPNLEIAGGAKLNDRIAGRLVFKDVYFSYPSRPHAPVLGGMTLEVEAGRCLAVVGASGCGKSTVLRLLTRLYDPQSGTIELDGVPLQTLEPRSLRDRVGVVEQEPVLFGGSIADNIRYGRPGASQEDVEAAAAVANASNFIEGFPDGYDTQVGEGGVQISGGQKQRIAIARAVLKDPAIMLLDEATSALDSESEHLVRIALERVTKGRTSLLVAHRLSTVRSMADKICVLNKGKVVEVGTYDELASKPDGHFRRLVQFQML 891
            MRA GA+ERV +++                 T  IP     GG +   R+ GR+ F+ V F+YPSRP APVL  ++L +  G  +AVVG SG GKST+  LL RLYDPQ G + LDG PL  L+P  LR ++G+V QEP+LF  S+A+NIRYGRPGAS  +VEAAA  A+A  FI  FP GY+T+VGE GVQ+SGGQKQR+AIARAVLKDP +++LDEATSALD+ESEHLV+ AL+ + +GRT+L++AHRLSTV   A ++ VL KG+VV+ G++  L ++ DG +RRLV+ Q +
Sbjct:  312 MRASGAAERVFELVDR---------------TPAIP----PGGGERPSRVEGRVEFERVRFAYPSRPAAPVLQDVSLSLAPGEVVAVVGPSGAGKSTLAALLARLYDPQGGRLLLDGRPLAQLDPAWLRGQLGIVAQEPLLFSASLAENIRYGRPGASDAEVEAAARAAHAHEFISHFPQGYETRVGERGVQLSGGQKQRVAIARAVLKDPRLLVLDEATSALDAESEHLVKDALDHLMRGRTTLIIAHRLSTVAG-AHRVLVLEKGRVVQSGSHQSLMAE-DGLYRRLVERQFV 585          
BLAST of mRNA_H-elongata_contig7676.15346.1 vs. uniprot
Match: A0A540X1T7_9DELT (ATP-binding cassette domain-containing protein n=1 Tax=Myxococcus llanfairpwllgwyngyllgogerychwyrndrobwllllantysiliogogogochensis TaxID=2590453 RepID=A0A540X1T7_9DELT)

HSP 1 Score: 289 bits (740), Expect = 1.830e-90
Identity = 160/297 (53.87%), Postives = 207/297 (69.70%), Query Frame = 1
Query:    4 VMRALGASERVMDII-RSAEMPMSVETDNVAAATHTIPNLEIAGGAKLNDRIAGRLVFKDVYFSYPSRPHAPVLGGMTLEVEAGRCLAVVGASGCGKSTVLRLLTRLYDPQSGTIELDGVPLQTLEPRSLRDRVGVVEQEPVLFGGSIADNIRYGRPGASQEDVEAAAAVANASNFIEGFPDGYDTQVGEGGVQISGGQKQRIAIARAVLKDPAIMLLDEATSALDSESEHLVRIALERVTKGRTSLLVAHRLSTVRSMADKICVLNKGKVVEVGTYDELASKPDGHFRRLVQFQML 891
            VMRA GA+ERV +++ R   +P                    AGG +L   + G + F+ V FSYP+RP  PVL G+ LE+  G  +AVVG SG GKST+  LL+R YDPQ G + LDG PL TLEP  LR  +G+V QEP LF  SIADNIRY +P A+   VE AA  ANA +FI+ FP+ Y TQVGE GVQ+SGGQKQR+AIARAVLKDP +++LDEATSALD+ESEHLV+ ALER+ KGRT+L++AHRLSTV ++ D++ VL  G++V+ GT+  L S+ +G +RRLV+ Q +
Sbjct:  313 VMRATGAAERVFELVDREPAIP--------------------AGGERLAS-VKGHVEFRAVRFSYPTRPDVPVLQGLDLELRPGEVVAVVGPSGAGKSTLASLLSRFYDPQGGAVALDGHPLTTLEPEWLRRNIGMVAQEPQLFSCSIADNIRYAKPDATDAQVEEAARAANAHDFIQRFPEAYGTQVGERGVQLSGGQKQRVAIARAVLKDPRLLILDEATSALDAESEHLVKDALERLMKGRTTLIIAHRLSTVANV-DRVLVLEGGRIVQSGTHASLMSQ-EGLYRRLVERQFV 586          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig7676.15346.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FK61_ECTSI1.680e-16682.78Efflux ABC transporter, permease/ATP-binding prote... [more]
A0A835ZGY2_9STRA4.300e-9455.56Efflux ABC transporter n=1 Tax=Tribonema minus Tax... [more]
Q1DDB6_MYXXD2.960e-9255.59Efflux ABC transporter, permease/ATP-binding prote... [more]
UPI001CCC04835.740e-9253.90ABC transporter transmembrane domain-containing pr... [more]
A0A085WV65_9DELT8.740e-9254.73Lipid A export ATP-binding/permease protein MsbA n... [more]
A0A3A8NMX7_9DELT1.200e-9154.92ATP-binding cassette domain-containing protein n=4... [more]
A0A2W5T7L5_9DELT1.350e-9154.45ABC transporter permease n=1 Tax=Archangium gephyr... [more]
UPI001CED29375.960e-9153.90ABC transporter transmembrane domain-containing pr... [more]
A0A6I2GXX0_9DELT1.790e-9053.56ATP-binding cassette domain-containing protein n=2... [more]
A0A540X1T7_9DELT1.830e-9053.87ATP-binding cassette domain-containing protein n=1... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig7676contigH-elongata_contig7676:4875..9770 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score486.1
Seed ortholog evalue1.2e-134
Seed eggNOG ortholog2880.D7FK61
KEGG koko:K05657
KEGG TC3.A.1.201
KEGG Pathwayko02010,map02010
EggNOG free text desc.ATPase activity, coupled to transmembrane movement of substances
EggNOG OGsCOG1132@1,KOG0058@2759
Ec32 ortholog descriptionABC transporter type 1, transmembrane domain
Ec32 orthologEc-04_005690.1
COG Functional cat.V
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko02000
Hectar predicted targeting categoryother localisation
Exons7
Model size897
Cds size891
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig7676.15346.1prot_H-elongata_contig7676.15346.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig7676 4875..9764 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931171.7370238-CDS-H-elongata_contig7676:4874..49611622931171.7370238-CDS-H-elongata_contig7676:4874..4961Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7676 4875..4961 -
1691679727.7339206-CDS-H-elongata_contig7676:4874..49611691679727.7339206-CDS-H-elongata_contig7676:4874..4961Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7676 4875..4961 -
1622931171.7524312-CDS-H-elongata_contig7676:5817..59591622931171.7524312-CDS-H-elongata_contig7676:5817..5959Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7676 5818..5959 -
1691679727.7468257-CDS-H-elongata_contig7676:5817..59591691679727.7468257-CDS-H-elongata_contig7676:5817..5959Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7676 5818..5959 -
1622931171.7669373-CDS-H-elongata_contig7676:6483..66171622931171.7669373-CDS-H-elongata_contig7676:6483..6617Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7676 6484..6617 -
1691679727.7568839-CDS-H-elongata_contig7676:6483..66171691679727.7568839-CDS-H-elongata_contig7676:6483..6617Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7676 6484..6617 -
1622931171.779936-CDS-H-elongata_contig7676:7971..81061622931171.779936-CDS-H-elongata_contig7676:7971..8106Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7676 7972..8106 -
1691679727.7670553-CDS-H-elongata_contig7676:7971..81061691679727.7670553-CDS-H-elongata_contig7676:7971..8106Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7676 7972..8106 -
1622931171.799248-CDS-H-elongata_contig7676:8740..88991622931171.799248-CDS-H-elongata_contig7676:8740..8899Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7676 8741..8899 -
1691679727.7755225-CDS-H-elongata_contig7676:8740..88991691679727.7755225-CDS-H-elongata_contig7676:8740..8899Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7676 8741..8899 -
1622931171.81205-CDS-H-elongata_contig7676:9323..93861622931171.81205-CDS-H-elongata_contig7676:9323..9386Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7676 9324..9386 -
1691679727.7865663-CDS-H-elongata_contig7676:9323..93861691679727.7865663-CDS-H-elongata_contig7676:9323..9386Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7676 9324..9386 -
1622931171.8233237-CDS-H-elongata_contig7676:9593..97641622931171.8233237-CDS-H-elongata_contig7676:9593..9764Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7676 9594..9764 -
1691679727.7980137-CDS-H-elongata_contig7676:9593..97641691679727.7980137-CDS-H-elongata_contig7676:9593..9764Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7676 9594..9764 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931171.841755-UTR-H-elongata_contig7676:9764..97701622931171.841755-UTR-H-elongata_contig7676:9764..9770Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig7676 9765..9770 -
1691679727.8101804-UTR-H-elongata_contig7676:9764..97701691679727.8101804-UTR-H-elongata_contig7676:9764..9770Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig7676 9765..9770 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig7676.15346.1

>prot_H-elongata_contig7676.15346.1 ID=prot_H-elongata_contig7676.15346.1|Name=mRNA_H-elongata_contig7676.15346.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=297bp
MRALGASERVMDIIRSAEMPMSVETDNVAAATHTIPNLEIAGGAKLNDRI
AGRLVFKDVYFSYPSRPHAPVLGGMTLEVEAGRCLAVVGASGCGKSTVLR
LLTRLYDPQSGTIELDGVPLQTLEPRSLRDRVGVVEQEPVLFGGSIADNI
RYGRPGASQEDVEAAAAVANASNFIEGFPDGYDTQVGEGGVQISGGQKQR
IAIARAVLKDPAIMLLDEATSALDSESEHLVRIALERVTKGRTSLLVAHR
LSTVRSMADKICVLNKGKVVEVGTYDELASKPDGHFRRLVQFQMLE*
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mRNA from alignment at H-elongata_contig7676:4875..9770-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig7676.15346.1 ID=mRNA_H-elongata_contig7676.15346.1|Name=mRNA_H-elongata_contig7676.15346.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=4896bp|location=Sequence derived from alignment at H-elongata_contig7676:4875..9770- (Himanthalia elongata Himel1 dioecious)
CAGGTCATGCGCGCCCTCGGTGCCAGCGAGCGAGTCATGGACATCATCCG CTCAGCGGAGATGCCAATGTCGGTGGAGACAGACAACGTTGCTGCCGCTA CTCATACGATCCCAAACCTGGAGATCGCGGGAGGAGCGAAGCTGAACGAC CGAATAGCGGGCCGGTTGGTTTTCAAGGTTCGTGGATGGCACGAGGAGGG AGGAAGTGGGGGGGGGGTTATTCTTCCCTTGAAATGACTCAAGCGATAAG TTTACATACATACATTGTATGTACCAGGTAATATGCACAAAACTATCATA TGCTACAGTACGTTTTTTTTCTTTTTTTTCTTTCTGCAAATCAGGGCCAT TTATGTTCCGTTTTTAATAATAACCCATGTCCAGGACGTTTACTTCAGCT ACCCCTCAAGACCGCACGCTCCCGTGCTTGGAGGTATGACACTTGAGGTA AGAGTAAGACTTGGTGCGGTGCGCCTCCCTTGTGTTCGCCCTCCGAAGGT TGATCGGACTGTGCGGGTGGGACTTGGACATAATCTCGGCATACCTCATC CAGATTCCGTGAACCGTTCGAGCTATGGACACACGAGCACATATACACAT ACACACACACCTCGTTGTACAACGTTTAAAATCTCGAATATAAATATATC GGTGGTAAACCAGAAATAAACGCGAAAATAATAGTAATAAAACACTTTTA AAAACACATTTGATTATATAAAACACACGGTATAAAACACAAGAACGAGA ACAATAAATAGCACGTCAAACCGCCGCACTTCCTAAGGCTCGTATCCAAT TAAAACGCAAAAACGTTTAAAGAACGCACAACCCATACGTGCCAAACCAT TTGGTGCTTCGGGGCAACAAGGTGGAAGCAGGGAGATGTTTGGCCGTCGT TGGGGCGAGCGGATGCGGCAAGTCGACGGTGCTACGCCTGTTGACTAGGC TCTACGACCCACAGTCTGGAACGATCGAGCTTGATGGAGTCCCGCTTCAA ACCCTTGAGCCGAGGTCGCTCCGAGATAGGGTGAGTGTCGAAAGGAGTGG GCCATACTAATAGTAGTAGAGGACACTGCAAACACGACATAATCTCCCTG CGGTCGTCAAAAAAACGACACAGAAAAAAAGAAGAGGACGTGTAAGGTTT GGAAAGAGTGGGGCTTAAATGAGTCGATCGAAAATGTTCGAGTTTTTTAT ACGATGATGGAGGCCGAGCGCGTGGCGAAGAGGGATTGGAGTGGATCCAC TTCACACGGACATTATCAACTACACACCACGCGCAATGATGCTTCTCCCT GGGGTCCTTGAAGCATGGTCATATTCTTGATTATTTTTATATTCTCGCTG TATATTGTACACCAGATACAGTTTATGAATTGGATGACTGATTTATAAAG AAAGTTGGCCAGAGCGGTCGTTTGGTGATGGGCGCATTTGGAGAAACCCA TCCAGAAGCTATCTTAAATGTCCAATGAAACCCTGACTAATAGCCGCCAG CGGAAAAATTAAAAAGACAACTTATTAGGCGCCGCATATATATATATATA TATATATATATATGCATTTTTCGTTAAAATCCTGAGCTCGCTCAATTGTC AGTGCGTCCTACCCTCTATCCCCTTCACCCCACTACTTTTTGCATGTTGG AAACGACTTTCAAGGTGGGAGTCGTAGAGCAGGAGCCCGTCTTGTTCGGC GGGAGCATTGCCGATAACATCCGCTACGGGAGGCCGGGAGCAAGCCAAGA GGACGTCGAAGCGGCGGCGGCCGTCGCAAATGCTTCGAATTTTATTGAGG TTCAGTATGCAAGAAATTCAGCACAAAATTAAACGCTTTGACTATTTCAT CATGTACATAGCATATCAGTGAAAGAGAAAACGCTGCGACTTTTTAAACT GAAATACAGCATCGCTCTATAGCACGGCACAACAGTTTCGAGGCTGGTAA GGACGGGACCCTATCGCCTCCTTGTCGTATCGGTGTTGGCTGTATTTTGT AGTCTTTGGAAGGGACAAACGCTGCAAAAGGTCGATACACAGAGGCAGCA GGAGCAGAAAACATTATACATGTATTTGATCGATAGCGATGGGGTGTACG GTATATGATGTGGGGAGATTTGGGATGGATTAGAAATATTTTGATGGAAA ATCATTAGCCAATTGTTATTATTATTATTATTGTTATATTATTATTATTA GTAGTAGTAGTAGTAGTAGTAGTATTATTAGTATTATTAGTATTATTAAT AATAATATCATTTATTATTATTATTATTATTAATAATAATAATATCATTT ATTATTATTATTATTATTATTAATAATAATATCATTTATTATTATTATTA ATAATAACAATATCATTAATGACATTATTGATAATATTAATATATTTATC TGCCGACATGGGCTTTCATGGTGGCAGTTTGTAACTAACCCTAACGTTTT AGTAGAGTACCAACGCTGCTCCATCCTGGTTGCTATCCTGAGGGATCTAT AATGGCCATTGAGGCACATCTATAAAGTAGTTGATAGTATATACAGTTGT GTATATACACCGAAGATAAACGAAATTTGGACAAATTCGCCTATAAAACG GTATTTGTATTTTTAGTCCACAGAAGACTTTGGGTAAACAATGTTAGTAA CCTTCCACCCTCGGGGTCAACGCTGGGACCCCGTTCAAATTTTATCTTGA AGATGAGTAACACGTCATCTCTCCGGTCTCCTCAAGAGGGTGGCAGTTCG TCGTCCGGTAGAAACACCCCCAACATCGCCCTTCTGTTTAGCTAGACTCA GTACACGAGTCACCCTACCCATTCGGACTTCCGTCATCGTAGTATTAATA GTTAAACAAGGGACTGCGATACAAGACATATCTCGTCGAGGTCTCCGTAA AGCATATCCAAAGGACCCCTATTGGTGCAGAAAAAAATAGACTAGGGAAA TAGAGGCCCTTGTTATAACTTGTAGGGGGAATAATATAAATAGCGTCACC AATACGATTCCCACCTTTCCCCGGTTCACGCCTACGCTTTTAAATATTCT CGGCCCTCATATTCGGTGATTATTTTTTGCTGATTTTAGCTCTAAATCGT ATGCCTCCCTTCCCCTCCCCTCTCCCCCCCCCCCCCCACTCGTCACCTTT CAGGGCTTTCCAGACGGCTACGACACGCAGGTGGGCGAAGGGGGCGTTCA GATTTCGGGGGGGCAGAAGCAGCGAATCGCCATCGCCCGCGCGGTTCTCA AAGACCCGGCTATCATGCTTCTCGATGAGGCCACCAGGTTTGTCGTTTGA TGTGGTTCGTTGAAACCACCATGTGTGTTTGTGTTTATTTAATTTCACAT AACCGCGCAATCTAGCTCTGCCATACTGACCATTCTAGGCTACTCGCATT GATATTTTTTTAGGGGGGTCCTTCCTGAGGGAGATCAATGTGCATTTGTG TGTGTTTATAAAATTGCACATAACCGTGCAATTCCGCCTTGTCATGCTAG TCCTTTTAGGCTACTTGCGTTGATCCTCCCTATTGGGGATCAATGTGCAT TTGTATGTATTTATTCAATTGCACATAACCACGTAATCCGGGCCTGTCAT GCTAGTCATTCTAGGCTGTGTGTCTATTTTTATCAAATTACACATAACTG CGCAACCCGGTGCTGACGTTCTTATTTTTCATGTGTGTGTGTGTGTCCAG TCTAGCTAAGGCGCCCGCGCATAACTAATCGCACCTGGTGCTACGCTTGC TTCATTCCTTCCTTCTCTTTATGCACATGCCTTTGATAACTAATGATTTT ATCCGACACAGCGCCCTCGACAGCGAGAGCGAACACCTGGTGCGAATAGC TTTGGAAAGGGTAACCAAGGGACGAACCTCGTTGCTCGTTGCTCATCGCC TGTCCACCGTCCGGAGTATGGCGGACAAAATCTGCGTTCTCAACAAGGGC AAGGTATTTTTTGCCAATTTTATGGGTACAGCATACAAATCCCTACAAAT TGCTGTAACATACTAAAGGAAATAGAACAAAGTTCACGATTAATATTGCA GCTCATTGGAATGAATAAAGAAAATGAACAATCAGCTGGATCTGTAACAA GGGCGGTTCGTGTATTATTCGAGTTATTGTTAGGTATTTTTATTGAAAAA AAACATATGAACTCATGAAAACCCTCCAAACATTCACCCCTTCTTAACAC CACCATAAGAAGTGCATTTCTTTTAGTGCAAAAAAGAAACATGATGTATT TCCGTCGATGATGCAACATCGAAAAAAGTCACACAATTTTTTGAGCTGTG TTGGTGTTTTGTATCGTATGGTATTTATCACCATATATCATATAATGTAA GCATGGTCATATTGCTCTATATGGAGCAGATTCTATGTCTTCCCTTGGCG AAGAAAAATCATAACCTTTGCTATGCCATAGTACGGTACTCGAATATGAG TTTAAATGGAGCCCATATCACCGTCGCTCCCGGCATCTTTGTGTCGAAGG CGTGTCTTCTATCTTGTAGGAGCCGAAATATATTTATATATATATAAATA AATGTTTTTTGTATGTTTTCAACTTAACGAATGCCGCCTTGTATCCTTCA GTCGAAAGCACGTCTTTTCGTTTGAGGATCGCAATTTTCTATATTTTATT TTCGAAGAAAAAGGGGCGTTTTTTTACACTTAACTGAGAGAGCTCTCCCC CTCTTGCAATACTCGAACATATATCGGTTGTTTTGTGTCCCCCGACAGCC GGGGCTAACTTGGCGGATCCCCTATTGGGTTTCCACACCCCTCCTAATGG CATTTTCAGGTTGTGGAGGTGGGGACGTACGACGAGCTGGCAAGCAAGCC GGATGGGCACTTTAGGCGGCTTGTCCAGTTCCAGATGCTCGAGTGA
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Coding sequence (CDS) from alignment at H-elongata_contig7676:4875..9770-

>mRNA_H-elongata_contig7676.15346.1 ID=mRNA_H-elongata_contig7676.15346.1|Name=mRNA_H-elongata_contig7676.15346.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1782bp|location=Sequence derived from alignment at H-elongata_contig7676:4875..9770- (Himanthalia elongata Himel1 dioecious)
ATGCGCGCCCTCGGTGCCAGCGAGCGAGTCATGGACATCATCCGCTCAGC
GGAGATGCCAATGTCGGTGGAGACAGACAACGTTGCTGCCGCTACTCATA
CGATCCCAAACCTGGAGATCGCGGGAGGAGCGAAGCTGAACGACCGAATA
GCGGGCCGGTTGGTTTTCAAGATGCGCGCCCTCGGTGCCAGCGAGCGAGT
CATGGACATCATCCGCTCAGCGGAGATGCCAATGTCGGTGGAGACAGACA
ACGTTGCTGCCGCTACTCATACGATCCCAAACCTGGAGATCGCGGGAGGA
GCGAAGCTGAACGACCGAATAGCGGGCCGGTTGGTTTTCAAGGACGTTTA
CTTCAGCTACCCCTCAAGACCGCACGCTCCCGTGCTTGGAGGTATGACAC
TTGAGGACGTTTACTTCAGCTACCCCTCAAGACCGCACGCTCCCGTGCTT
GGAGGTATGACACTTGAGGTGGAAGCAGGGAGATGTTTGGCCGTCGTTGG
GGCGAGCGGATGCGGCAAGTCGACGGTGCTACGCCTGTTGACTAGGCTCT
ACGACCCACAGTCTGGAACGATCGAGCTTGATGGAGTCCCGCTTCAAACC
CTTGAGCCGAGGTCGCTCCGAGATAGGGTGGAAGCAGGGAGATGTTTGGC
CGTCGTTGGGGCGAGCGGATGCGGCAAGTCGACGGTGCTACGCCTGTTGA
CTAGGCTCTACGACCCACAGTCTGGAACGATCGAGCTTGATGGAGTCCCG
CTTCAAACCCTTGAGCCGAGGTCGCTCCGAGATAGGGTGGGAGTCGTAGA
GCAGGAGCCCGTCTTGTTCGGCGGGAGCATTGCCGATAACATCCGCTACG
GGAGGCCGGGAGCAAGCCAAGAGGACGTCGAAGCGGCGGCGGCCGTCGCA
AATGCTTCGAATTTTATTGAGGTGGGAGTCGTAGAGCAGGAGCCCGTCTT
GTTCGGCGGGAGCATTGCCGATAACATCCGCTACGGGAGGCCGGGAGCAA
GCCAAGAGGACGTCGAAGCGGCGGCGGCCGTCGCAAATGCTTCGAATTTT
ATTGAGGGCTTTCCAGACGGCTACGACACGCAGGTGGGCGAAGGGGGCGT
TCAGATTTCGGGGGGGCAGAAGCAGCGAATCGCCATCGCCCGCGCGGTTC
TCAAAGACCCGGCTATCATGCTTCTCGATGAGGCCACCAGGGCTTTCCAG
ACGGCTACGACACGCAGGTGGGCGAAGGGGGCGTTCAGATTTCGGGGGGG
CAGAAGCAGCGAATCGCCATCGCCCGCGCGGTTCTCAAAGACCCGGCTAT
CATGCTTCTCGATGAGGCCACCAGCGCCCTCGACAGCGAGAGCGAACACC
TGGTGCGAATAGCTTTGGAAAGGGTAACCAAGGGACGAACCTCGTTGCTC
GTTGCTCATCGCCTGTCCACCGTCCGGAGTATGGCGGACAAAATCTGCGT
TCTCAACAAGGGCAAGCGCCCTCGACAGCGAGAGCGAACACCTGGTGCGA
ATAGCTTTGGAAAGGGTAACCAAGGGACGAACCTCGTTGCTCGTTGCTCA
TCGCCTGTCCACCGTCCGGAGTATGGCGGACAAAATCTGCGTTCTCAACA
AGGGCAAGGTTGTGGAGGTGGGGACGTACGACGAGCTGGCAAGCAAGCCG
GATGGGCACTTTAGGCGGCTTGTCCAGTTCCAGATGCTCGAGTGAGTTGT
GGAGGTGGGGACGTACGACGAGCTGGCAAGCAAGCCGGATGGGCACTTTA
GGCGGCTTGTCCAGTTCCAGATGCTCGAGTGA
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