mRNA_H-elongata_contig76739.15344.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig76739.15344.1 vs. uniprot
Match: D7FUW2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUW2_ECTSI) HSP 1 Score: 299 bits (765), Expect = 3.230e-99 Identity = 151/208 (72.60%), Postives = 167/208 (80.29%), Query Frame = 1
Query: 1 LVFLAGLGSGVTEAVLVVTPAEVCKIRMQAQKKPVQVVDSIVTAADNGTSTSTSPSTFKYRGVFQTATVLVKEEGLGALYKGLVPTVLRQGCNQAINFTCYQVFKAQLSAYIGRDELSPWQHMLLGGLSGGIGPCINNPLDVVKTRLQKQVVIPGQPPKYGGFGSAIGVIAREEGVRALWKGLAPRLMRIMPGQAITFMTYEWASSHL 624
LVFLAGLGSGVTEA++VVTPAEVCKIRMQAQ + + + KYR V QTA V+ +EEG+GALYKGL PTVLRQGCNQA+NFTCYQ+FK QLS Y G +EL+ WQHMLLGGLSGGIGPC+NNPLDVVKTRLQKQVVIPGQ PKYGGF SAI +IA+EEGV+ALWKGL PRLMRIMPGQAITFMTYEW S L
Sbjct: 105 LVFLAGLGSGVTEAIVVVTPAEVCKIRMQAQFHSLLDPEEMARR--------------KYRNVLQTAVVVAREEGVGALYKGLAPTVLRQGCNQAVNFTCYQMFKTQLSLYTGSEELASWQHMLLGGLSGGIGPCVNNPLDVVKTRLQKQVVIPGQAPKYGGFVSAISLIAKEEGVKALWKGLTPRLMRIMPGQAITFMTYEWVSKRL 298
BLAST of mRNA_H-elongata_contig76739.15344.1 vs. uniprot
Match: D8LI49_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI49_ECTSI) HSP 1 Score: 296 bits (759), Expect = 1.710e-98 Identity = 152/208 (73.08%), Postives = 170/208 (81.73%), Query Frame = 1
Query: 1 LVFLAGLGSGVTEAVLVVTPAEVCKIRMQAQKKPVQVVDSIVTAADNGTSTSTSPSTFKYRGVFQTATVLVKEEGLGALYKGLVPTVLRQGCNQAINFTCYQVFKAQLSAYIGRDELSPWQHMLLGGLSGGIGPCINNPLDVVKTRLQKQVVIPGQPPKYGGFGSAIGVIAREEGVRALWKGLAPRLMRIMPGQAITFMTYEWASSHL 624
LVFLAGLGSGVTEAV+VVTPAEVCKIRMQ+Q S+ AD S+ KYR V QTATV+V+EEG+ ALYKGL PTVLRQGCNQA+NFTCYQVFK +LS +G +EL+PW HMLLGGLSGGIGPC+NNPLDV KTRLQ+QV+IPGQ PKYGGF SAI +IA+EEGV+ALWKGL PRLMRIMPGQAITFMTYEW S L
Sbjct: 92 LVFLAGLGSGVTEAVMVVTPAEVCKIRMQSQ--------SLQVIADG--------SSGKYRDVLQTATVVVREEGVRALYKGLAPTVLRQGCNQAVNFTCYQVFKTKLSDLLGTEELAPWHHMLLGGLSGGIGPCVNNPLDVSKTRLQQQVLIPGQAPKYGGFVSAISLIAKEEGVKALWKGLTPRLMRIMPGQAITFMTYEWVSKRL 283
BLAST of mRNA_H-elongata_contig76739.15344.1 vs. uniprot
Match: A0A6V1U9P6_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1U9P6_HETAK) HSP 1 Score: 275 bits (702), Expect = 1.780e-89 Identity = 141/207 (68.12%), Postives = 158/207 (76.33%), Query Frame = 1
Query: 4 VFLAGLGSGVTEAVLVVTPAEVCKIRMQAQKKPVQVVDSIVTAADNGTSTSTSPSTFKYRGVFQTATVLVKEEGLGALYKGLVPTVLRQGCNQAINFTCYQVFKAQLSAYIGRDELSPWQHMLLGGLSGGIGPCINNPLDVVKTRLQKQVVIPGQPPKYGGFGSAIGVIAREEGVRALWKGLAPRLMRIMPGQAITFMTYEWASSHL 624
V LAGLGSGVTEA+LVVTPAEVCKIRMQ+Q + ++ T KYR V QTA V+V+EEG GALYKG+VPT LRQGCNQA+NFTCYQ+FK Q GR+EL+PWQHML+GGLSGG GP NNPLDVVKTRLQKQ V PGQ PKY G G A+ VIA+EEGV ALWKGL PRLMRIMPGQAITFMTYE+ S H+
Sbjct: 110 VLLAGLGSGVTEAILVVTPAEVCKIRMQSQYHSMMDPAAVATR--------------KYRNVLQTAVVIVREEGPGALYKGVVPTTLRQGCNQAVNFTCYQIFKEQWLKRSGREELAPWQHMLIGGLSGGFGPAANNPLDVVKTRLQKQRVEPGQRPKYTGLGQAVVVIAKEEGVLALWKGLTPRLMRIMPGQAITFMTYEFVSKHV 302
BLAST of mRNA_H-elongata_contig76739.15344.1 vs. uniprot
Match: A0A836CM83_9STRA (Mitochondrial carrier domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM83_9STRA) HSP 1 Score: 260 bits (664), Expect = 1.270e-83 Identity = 135/212 (63.68%), Postives = 158/212 (74.53%), Query Frame = 1
Query: 4 VFLAGLGSGVTEAVLVVTPAEVCKIRMQAQKKPVQVVDSIVTAADNGTSTSTSPSTFKYRGVFQTATVLVKEEGLGALYKGLVPTVLRQGCNQAINFTCYQVFKAQLSAYIGRDELSPWQHMLLGGLSGGIGPCINNPLDVVKTRLQKQVVIPGQPPKYGGFGSAIGVIAREEGVRALWKGLAPRLMRIMPGQAITFMTYEWASSHLISLSS 639
VFLAGLGSGVTEAV+VVTPAEVCKIRMQAQ + + + KYR V QTA ++VKEEG+GALYKG+VPT LRQGCNQA+NF+ YQ+FK + A EL WQHML+GGLSGG+GP +NNPLDVVKTRLQ+QVVIPG+ PKY G G + VIA+EEGV ALWKGL PRL+RIMPGQAITF TYE+ S + L+S
Sbjct: 116 VFLAGLGSGVTEAVMVVTPAEVCKIRMQAQYHSMLDPEQMARR--------------KYRNVIQTAGLIVKEEGIGALYKGVVPTTLRQGCNQAVNFSFYQIFKTKWEAARDGKELIAWQHMLIGGLSGGMGPVVNNPLDVVKTRLQRQVVIPGEVPKYRGLGQGMAVIAKEEGVLALWKGLTPRLLRIMPGQAITFATYEFVSKKIHGLAS 313
BLAST of mRNA_H-elongata_contig76739.15344.1 vs. uniprot
Match: A0A6U4GJ12_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4GJ12_9STRA) HSP 1 Score: 256 bits (653), Expect = 4.870e-82 Identity = 138/218 (63.30%), Postives = 161/218 (73.85%), Query Frame = 1
Query: 4 VFLAGLGSGVTEAVLVVTPAEVCKIRMQAQ----KKPVQVVDSIVTAADNGTSTSTSPSTFKYRGVFQTATVLVKEEGLGALYKGLVPTVLRQGCNQAINFTCYQVFKAQLSAYIGRD--ELSPWQHMLLGGLSGGIGPCINNPLDVVKTRLQKQVVIPGQPPKYGGFGSAIGVIAREEGVRALWKGLAPRLMRIMPGQAITFMTYEWASSHLISLSS 639
VFLAGLGSGVTEA+LVVTPAEVCKIRMQ+Q K P + + KYR VFQTA +V+EEGLGALYKG+ PT+ RQGCNQA+NFT YQ K +SA RD EL+ WQH+LLGGLSGG+GP NNPLDVVKTR+QKQV++PG+ PKY G S IGVIAREEGV ALW+G+ PRLMRIMPGQAITFMTYE+ +L ++ S
Sbjct: 114 VFLAGLGSGVTEAILVVTPAEVCKIRMQSQYHSLKDPALRFEEV-----------------KYRNVFQTAYTIVREEGLGALYKGVGPTIARQGCNQAVNFTAYQSMKDWVSANF-RDGGELASWQHLLLGGLSGGMGPLANNPLDVVKTRMQKQVILPGETPKYAGMISGIGVIAREEGVGALWRGITPRLMRIMPGQAITFMTYEFMQKNLWTMIS 313
BLAST of mRNA_H-elongata_contig76739.15344.1 vs. uniprot
Match: W7U0T5_9STRA (Succinate fumarate mitochondrial transporter n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U0T5_9STRA) HSP 1 Score: 247 bits (630), Expect = 2.710e-78 Identity = 133/213 (62.44%), Postives = 151/213 (70.89%), Query Frame = 1
Query: 7 FLAGLGSGVTEAVLVVTPAEVCKIRMQAQ----KKPVQVVDSIVTAADNGTSTSTSPSTFKYRGVFQTATVLVKEEGLGALYKGLVPTVLRQGCNQAINFTCYQVFKAQLSAYIGRDELSPWQHMLLGGLSGGIGPCINNPLDVVKTRLQKQVVIPGQPPKYGGFGSAIGVIAREEGVRALWKGLAPRLMRIMPGQAITFMTYEWASSHLISL 633
FLAGLGSGVTEAVLVVTPAEVCKIR+QAQ PVQ+ + KYR V QTA V+ +EEG+GALYKG+VPTV+RQG NQA+NFT YQ K R EL PW+ ML GGLSGG+GP +NNPLDVVKTRLQKQ ++ GQ PKY G AI VI EEGV ALWKG+ PRLMRIMPGQAITFMTYE+ S H+ S+
Sbjct: 130 FLAGLGSGVTEAVLVVTPAEVCKIRLQAQFHSMADPVQLANR------------------KYRNVLQTAVVVAREEGIGALYKGVVPTVMRQGINQAVNFTTYQAVKTAWLERQQRKELLPWESMLFGGLSGGLGPLVNNPLDVVKTRLQKQRIVEGQLPKYRGIFQAIPVIVSEEGVLALWKGITPRLMRIMPGQAITFMTYEFVSRHMKSV 324
BLAST of mRNA_H-elongata_contig76739.15344.1 vs. uniprot
Match: A0A7S4T6Q3_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4T6Q3_9STRA) HSP 1 Score: 242 bits (617), Expect = 8.090e-78 Identity = 123/206 (59.71%), Postives = 149/206 (72.33%), Query Frame = 1
Query: 7 FLAGLGSGVTEAVLVVTPAEVCKIRMQAQKKPVQVVDSIVTAADNGTSTSTSPSTFKYRGVFQTATVLVKEEGLGALYKGLVPTVLRQGCNQAINFTCYQVFKAQLSAYIGRDELSPWQHMLLGGLSGGIGPCINNPLDVVKTRLQKQVVIPGQPPKYGGFGSAIGVIAREEGVRALWKGLAPRLMRIMPGQAITFMTYEWASSHL 624
F AGL SG+TEA+LVVTPAEVCKIRMQ+Q + + KY V QTAT +V+EEGLGALYKG+VPT++RQGCNQA+NF+ Y FK + Y GR EL W+ ++LGG+SGG+GP +NNPLDVVKTRLQKQVV PG+P KY G G + +IA+EEG ALWKG+ PRL+RIMPGQAITFMTYE SS +
Sbjct: 34 FFAGLASGLTEAILVVTPAEVCKIRMQSQYHSLLDPQQMKHR--------------KYTNVVQTATTIVREEGLGALYKGVVPTMMRQGCNQAVNFSVYNWFKKMVLEYRGRKELDSWESLILGGVSGGMGPLVNNPLDVVKTRLQKQVVAPGKPAKYTGLGQSCALIAKEEGYAALWKGITPRLLRIMPGQAITFMTYEAVSSKM 225
BLAST of mRNA_H-elongata_contig76739.15344.1 vs. uniprot
Match: B7GCT1_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7GCT1_PHATC) HSP 1 Score: 241 bits (616), Expect = 2.390e-76 Identity = 128/206 (62.14%), Postives = 150/206 (72.82%), Query Frame = 1
Query: 7 FLAGLGSGVTEAVLVVTPAEVCKIRMQAQKKPVQVVDSIVTAADNGTSTSTSPSTFKYRGVFQTATVLVKEEGLGALYKGLVPTVLRQGCNQAINFTCYQVFKAQLSAYIGRDELSPWQHMLLGGLSGGIGPCINNPLDVVKTRLQKQVVIPGQPPKYGGFGSAIGVIAREEGVRALWKGLAPRLMRIMPGQAITFMTYEWASSHL 624
F AGL SG+TEAVLVVTPAEVCKIRMQ+Q ++D T+ KY V QTA ++VKEEG GALYKG+VPT+LRQGCNQA+NFT Y K Q+ + G D L+ WQ +L+GGLSGG+GP +NNPLDVVKTRLQKQVV G+P KY G A VIA+EEGV ALWKG+ PRLMRIMPGQAITFMTYE S+ +
Sbjct: 128 FTAGLFSGLTEAVLVVTPAEVCKIRMQSQYH--SMMDP------------TAMQHRKYTNVLQTAMLIVKEEGAGALYKGVVPTMLRQGCNQAVNFTAYSAIKQQVMQWQGTDSLASWQSLLIGGLSGGMGPVVNNPLDVVKTRLQKQVVAAGKPAKYTGLAQACVVIAKEEGVLALWKGITPRLMRIMPGQAITFMTYEAVSAQM 319
BLAST of mRNA_H-elongata_contig76739.15344.1 vs. uniprot
Match: A0A1Z5JX09_FISSO (Solute carrier family 25 (Mitochondrial citrate transporter), member 1 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JX09_FISSO) HSP 1 Score: 242 bits (617), Expect = 5.720e-76 Identity = 124/209 (59.33%), Postives = 148/209 (70.81%), Query Frame = 1
Query: 7 FLAGLGSGVTEAVLVVTPAEVCKIRMQAQKKPVQVVDSIVTAADNGTSTSTSPSTFKYRGVFQTATVLVKEEGLGALYKGLVPTVLRQGCNQAINFTCYQVFKAQLSAYIGRDELSPWQHMLLGGLSGGIGPCINNPLDVVKTRLQKQVVIPGQPPKYGGFGSAIGVIAREEGVRALWKGLAPRLMRIMPGQAITFMTYEWASSHLISL 633
F AGL SG+TEA+LVVTPAEVCKIRMQ+Q + + KY V QTA ++VKEEGLGALYKG++PT+LRQGCNQA+NFT Y K ++ A G D L WQ +L+GGLSGG+GP +NNPLDVVKTRLQKQV+ PG+ PKY G G A I REEGV ALWKG+ PRL+RIMPGQAITFMTYE S+ + +
Sbjct: 169 FTAGLASGLTEAILVVTPAEVCKIRMQSQFHSMMDPSQLQKR--------------KYTNVIQTAFLIVKEEGLGALYKGVIPTMLRQGCNQAVNFTAYNYIKREVMARQGTDSLDSWQSLLIGGLSGGMGPLVNNPLDVVKTRLQKQVITPGKTPKYTGLGQACLKIGREEGVLALWKGITPRLLRIMPGQAITFMTYEAVSAQMTKM 363
BLAST of mRNA_H-elongata_contig76739.15344.1 vs. uniprot
Match: A0A7S2YD77_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YD77_9STRA) HSP 1 Score: 234 bits (598), Expect = 3.060e-74 Identity = 123/212 (58.02%), Postives = 149/212 (70.28%), Query Frame = 1
Query: 7 FLAGLGSGVTEAVLVVTPAEVCKIRMQAQKKPVQVVDSIVTAADNGTSTSTSPSTF---KYRGVFQTATVLVKEEGLGALYKGLVPTVLRQGCNQAINFTCYQVFKAQLSAYIGRDELSPWQHMLLGGLSGGIGPCINNPLDVVKTRLQKQVVIPGQPPKYGGFGSAIGVIAREEGVRALWKGLAPRLMRIMPGQAITFMTYEWASSHLISL 633
F AGL SG+TEAV+VVTPAEVCKIR+Q+Q + PS KY+ V Q A V+V+EEGLGALYKG+VPT+LRQG NQA+NFTCY K + + D+L WQ +++GG+SGG+GP NNP+D+VKTRLQKQV+ PG+ PKY G A VIAREEG+ ALWKG+ PRL+RIMPGQAITFMTYE S LISL
Sbjct: 83 FFAGLASGLTEAVVVVTPAEVCKIRLQSQFHSLM-----------------DPSQMHHRKYKNVVQAAYVIVREEGLGALYKGVVPTMLRQGINQAVNFTCYNAAKQWVMEWQQTDQLHHWQSLMIGGISGGVGPLANNPMDIVKTRLQKQVLAPGKTPKYTGLAQACVVIAREEGMLALWKGITPRLLRIMPGQAITFMTYEAVSRQLISL 277 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig76739.15344.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig76739.15344.1 >prot_H-elongata_contig76739.15344.1 ID=prot_H-elongata_contig76739.15344.1|Name=mRNA_H-elongata_contig76739.15344.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=214bp LVFLAGLGSGVTEAVLVVTPAEVCKIRMQAQKKPVQVVDSIVTAADNGTSback to top mRNA from alignment at H-elongata_contig76739:2..1588+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig76739.15344.1 ID=mRNA_H-elongata_contig76739.15344.1|Name=mRNA_H-elongata_contig76739.15344.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1587bp|location=Sequence derived from alignment at H-elongata_contig76739:2..1588+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig76739:2..1588+ >mRNA_H-elongata_contig76739.15344.1 ID=mRNA_H-elongata_contig76739.15344.1|Name=mRNA_H-elongata_contig76739.15344.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1284bp|location=Sequence derived from alignment at H-elongata_contig76739:2..1588+ (Himanthalia elongata Himel1 dioecious)back to top |