mRNA_H-elongata_contig76376.15313.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig76376.15313.1 vs. uniprot
Match: UPI0012D7B3FD (protein kinase n=1 Tax=Streptococcus pneumoniae TaxID=1313 RepID=UPI0012D7B3FD) HSP 1 Score: 49.3 bits (116), Expect = 2.150e-6 Identity = 25/52 (48.08%), Postives = 33/52 (63.46%), Query Frame = 1
Query: 1 LMVDVCQRVAHVHDHGFVHSDIKFENILLYEEAYNRYTAKLSDFGLAYGEGT 156
+ + VAH+H+HGFVH+DIK +NIL+ E+ KL DFGLA GT
Sbjct: 14 IFAQIVDAVAHLHNHGFVHNDIKADNILMSEDG----VPKLCDFGLACKIGT 61
BLAST of mRNA_H-elongata_contig76376.15313.1 vs. uniprot
Match: A0A5A7R292_STRAF (Mitogen-activated protein kinase kinase kinase n=1 Tax=Striga asiatica TaxID=4170 RepID=A0A5A7R292_STRAF) HSP 1 Score: 52.0 bits (123), Expect = 2.270e-6 Identity = 22/37 (59.46%), Postives = 29/37 (78.38%), Query Frame = 1
Query: 31 HVHDHGFVHSDIKFENILLYEEAYNRYTAKLSDFGLA 141
H+H HG+VH D+K +NILL + N +TAK+SDFGLA
Sbjct: 130 HIHSHGYVHCDLKPDNILLVPDGQNGFTAKISDFGLA 166
BLAST of mRNA_H-elongata_contig76376.15313.1 vs. uniprot
Match: A0A1G0YD73_9BACT (Non-specific serine/threonine protein kinase n=2 Tax=PVC group TaxID=1783257 RepID=A0A1G0YD73_9BACT) HSP 1 Score: 51.2 bits (121), Expect = 4.360e-6 Identity = 23/47 (48.94%), Postives = 33/47 (70.21%), Query Frame = 1
Query: 1 LMVDVCQRVAHVHDHGFVHSDIKFENILLYEEAYNRYTAKLSDFGLA 141
+M+ VC+ VAH H+HG +H DIK ENILL ++ K++DFG+A
Sbjct: 153 IMISVCETVAHAHEHGVIHCDIKPENILLSDDG----RVKIADFGVA 195
BLAST of mRNA_H-elongata_contig76376.15313.1 vs. uniprot
Match: A0A352EW19_9BACT (Non-specific serine/threonine protein kinase n=2 Tax=Blastocatellia bacterium TaxID=2052146 RepID=A0A352EW19_9BACT) HSP 1 Score: 48.5 bits (114), Expect = 3.900e-5 Identity = 22/47 (46.81%), Postives = 33/47 (70.21%), Query Frame = 1
Query: 1 LMVDVCQRVAHVHDHGFVHSDIKFENILLYEEAYNRYTAKLSDFGLA 141
++ V ++H HDHG++H DIK +NIL+ + N +AKL+DFGLA
Sbjct: 265 IITQVLDALSHAHDHGYIHRDIKDQNILV-RSSGNELSAKLTDFGLA 310
BLAST of mRNA_H-elongata_contig76376.15313.1 vs. uniprot
Match: UPI0016565C25 (serine/threonine protein kinase n=1 Tax=Streptomyces sp. CB02980 TaxID=2542736 RepID=UPI0016565C25) HSP 1 Score: 48.5 bits (114), Expect = 3.900e-5 Identity = 23/47 (48.94%), Postives = 35/47 (74.47%), Query Frame = 1
Query: 1 LMVDVCQRVAHVHDHGFVHSDIKFENILLYEEAYNRYTAKLSDFGLA 141
L+ VC+ +AH+H+ G+VH+D+K EN+L+ E+ + KLSDFGLA
Sbjct: 142 LIAGVCEGLAHLHEAGWVHADLKPENVLIGEDG----SVKLSDFGLA 184
BLAST of mRNA_H-elongata_contig76376.15313.1 vs. uniprot
Match: A0A5A7QQ80_STRAF (Mitogen-activated protein kinase kinase kinase n=1 Tax=Striga asiatica TaxID=4170 RepID=A0A5A7QQ80_STRAF) HSP 1 Score: 48.1 bits (113), Expect = 5.220e-5 Identity = 23/48 (47.92%), Postives = 31/48 (64.58%), Query Frame = 1
Query: 13 VCQRVAHVHDHGFVHSDIKFENILLYEEAYNRYTAKLSDFGLAYGEGT 156
+ + + H+H GFVH D+K EN+LL E TAK+SDFGL+ GT
Sbjct: 136 ILRGLRHIHGLGFVHCDLKPENVLLVAENNGNLTAKISDFGLSKERGT 183
BLAST of mRNA_H-elongata_contig76376.15313.1 vs. uniprot
Match: UPI001C275554 (probable serine/threonine-protein kinase PBL28 n=3 Tax=Salvia splendens TaxID=180675 RepID=UPI001C275554) HSP 1 Score: 48.1 bits (113), Expect = 5.240e-5 Identity = 22/47 (46.81%), Postives = 33/47 (70.21%), Query Frame = 1
Query: 1 LMVDVCQRVAHVHDHGFVHSDIKFENILLYEEAYNRYTAKLSDFGLA 141
++V +C+ ++HVH G++H D+K EN+LL N +T KLSDFG A
Sbjct: 121 VLVGLCRALSHVHGCGYIHRDVKSENVLL----MNDFTPKLSDFGAA 163
BLAST of mRNA_H-elongata_contig76376.15313.1 vs. uniprot
Match: A5C8N9_VITVI (Protein kinase domain-containing protein n=2 Tax=Vitis TaxID=3603 RepID=A5C8N9_VITVI) HSP 1 Score: 48.1 bits (113), Expect = 5.340e-5 Identity = 21/44 (47.73%), Postives = 30/44 (68.18%), Query Frame = 1
Query: 10 DVCQRVAHVHDHGFVHSDIKFENILLYEEAYNRYTAKLSDFGLA 141
D+ + + ++H HG+VH DIK +NILL N + AK+ DFGLA
Sbjct: 280 DIVRGLCYIHGHGYVHCDIKPDNILLVPTCCNGFRAKIGDFGLA 323
BLAST of mRNA_H-elongata_contig76376.15313.1 vs. uniprot
Match: A0A2S9XBS8_9DELT (Non-specific serine/threonine protein kinase n=1 Tax=Enhygromyxa salina TaxID=215803 RepID=A0A2S9XBS8_9DELT) HSP 1 Score: 48.1 bits (113), Expect = 5.370e-5 Identity = 22/43 (51.16%), Postives = 30/43 (69.77%), Query Frame = 1
Query: 13 VCQRVAHVHDHGFVHSDIKFENILLYEEAYNRYTAKLSDFGLA 141
VC+ +AH H+ GFVH D+K ENI++ +A R K+ DFGLA
Sbjct: 160 VCKGLAHAHEVGFVHRDVKPENIMIGRDADGREQVKIVDFGLA 202
BLAST of mRNA_H-elongata_contig76376.15313.1 vs. uniprot
Match: A0A438F119_VITVI (Mitogen-activated protein kinase kinase kinase 17 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438F119_VITVI) HSP 1 Score: 48.1 bits (113), Expect = 5.380e-5 Identity = 21/44 (47.73%), Postives = 30/44 (68.18%), Query Frame = 1
Query: 10 DVCQRVAHVHDHGFVHSDIKFENILLYEEAYNRYTAKLSDFGLA 141
D+ + + ++H HG+VH DIK +NILL N + AK+ DFGLA
Sbjct: 616 DIVRGLCYIHGHGYVHCDIKPDNILLVPTCCNGFRAKIGDFGLA 659 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig76376.15313.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig76376.15313.1 >prot_H-elongata_contig76376.15313.1 ID=prot_H-elongata_contig76376.15313.1|Name=mRNA_H-elongata_contig76376.15313.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=51bp MVDVCQRVAHVHDHGFVHSDIKFENILLYEEAYNRYTAKLSDFGLAYGEGback to top mRNA from alignment at H-elongata_contig76376:421..576- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig76376.15313.1 ID=mRNA_H-elongata_contig76376.15313.1|Name=mRNA_H-elongata_contig76376.15313.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=156bp|location=Sequence derived from alignment at H-elongata_contig76376:421..576- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig76376:421..576- >mRNA_H-elongata_contig76376.15313.1 ID=mRNA_H-elongata_contig76376.15313.1|Name=mRNA_H-elongata_contig76376.15313.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=306bp|location=Sequence derived from alignment at H-elongata_contig76376:421..576- (Himanthalia elongata Himel1 dioecious)back to top |