mRNA_H-elongata_contig76256.15304.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig76256.15304.1 vs. uniprot
Match: A0A6H5KIH1_9PHAE (PPM-type phosphatase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KIH1_9PHAE) HSP 1 Score: 98.6 bits (244), Expect = 2.600e-22 Identity = 48/63 (76.19%), Postives = 56/63 (88.89%), Query Frame = 1
Query: 40 RVIEAAVSQAFLAADEEFLTTSGKPSAGSTATTAIILGDRFYSFNVGDSRTVLCRSGRAELAS 228
RVIE V+ AFLA DEEFLTT+ KPS+GSTATTA++LGDRFY FNVGDSRT+LCR+GRAE+ S
Sbjct: 945 RVIEDVVTAAFLATDEEFLTTASKPSSGSTATTAMVLGDRFYGFNVGDSRTILCRAGRAEVVS 1007
BLAST of mRNA_H-elongata_contig76256.15304.1 vs. uniprot
Match: D7FNP4_ECTSI (Putative serine/threonine phosphatase 2C ptc2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNP4_ECTSI) HSP 1 Score: 76.3 bits (186), Expect = 1.100e-14 Identity = 37/58 (63.79%), Postives = 45/58 (77.59%), Query Frame = 1
Query: 55 AVSQAFLAADEEFLTTSGKPSAGSTATTAIILGDRFYSFNVGDSRTVLCRSGRAELAS 228
A+S+AF AAD+EF+ TS P AGSTATT ++LG R Y NVGDSRTVLCR G+ +AS
Sbjct: 147 AISEAFAAADKEFIATSRLPEAGSTATTCLVLGPRLYMANVGDSRTVLCRGGKVRMAS 204
BLAST of mRNA_H-elongata_contig76256.15304.1 vs. uniprot
Match: A0A7S4DEC0_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DEC0_HETAK) HSP 1 Score: 75.5 bits (184), Expect = 1.910e-14 Identity = 35/65 (53.85%), Postives = 47/65 (72.31%), Query Frame = 1
Query: 34 LRRVIEAAVSQAFLAADEEFLTTSGKPSAGSTATTAIILGDRFYSFNVGDSRTVLCRSGRAELAS 228
L ++ A V++ F DE +L TS P GSTATT +I+G+RFY+FNVGDSRT+LCR+G+ L S
Sbjct: 197 LDELVAAGVARCFRRTDEHYLNTSDNPQCGSTATTVLIIGNRFYNFNVGDSRTLLCRNGKVRLVS 261
BLAST of mRNA_H-elongata_contig76256.15304.1 vs. uniprot
Match: A0A7S2FV88_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FV88_9STRA) HSP 1 Score: 70.5 bits (171), Expect = 1.910e-12 Identity = 33/58 (56.90%), Postives = 45/58 (77.59%), Query Frame = 1
Query: 43 VIEAAVSQAFLAADEEFLTTSGKPSAGSTATTAIILGDRFYSFNVGDSRTVLCRSGRA 216
++ A++++F+ D+EF+ T+G AGSTATT ++LGDR Y NVGDSRTVLCRSG A
Sbjct: 302 IVIGALTESFIYTDKEFMRTAGHAQAGSTATTVLLLGDRAYCGNVGDSRTVLCRSGEA 359
BLAST of mRNA_H-elongata_contig76256.15304.1 vs. uniprot
Match: A0A484DYX8_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DYX8_BRELC) HSP 1 Score: 65.9 bits (159), Expect = 8.230e-11 Identity = 36/73 (49.32%), Postives = 44/73 (60.27%), Query Frame = 1
Query: 1 LSPLFPHVTCNLRRVIEAAVSQAFLAADEEFLTTSGKPSAGSTATTAIILGDRFYSFNVGDSRTVLCRSGRAE 219
L PL L+ +I ++ AF DEEFL TS +P AGSTATT + G + NVGDSRTVL R+G AE
Sbjct: 500 LKPLLTMTIEELQSIIMKRLTNAFERTDEEFLRTSDRPQAGSTATTVFVAGKYLFVANVGDSRTVLSRNGTAE 572
BLAST of mRNA_H-elongata_contig76256.15304.1 vs. uniprot
Match: W2QPZ8_PHYPN (Uncharacterized protein n=30 Tax=Phytophthora TaxID=4783 RepID=W2QPZ8_PHYPN) HSP 1 Score: 65.5 bits (158), Expect = 1.120e-10 Identity = 35/73 (47.95%), Postives = 45/73 (61.64%), Query Frame = 1
Query: 1 LSPLFPHVTCNLRRVIEAAVSQAFLAADEEFLTTSGKPSAGSTATTAIILGDRFYSFNVGDSRTVLCRSGRAE 219
L PL L+ +I +++AF DEEFL S +P AGSTATT + G + NVGDSRTVL R+G+AE
Sbjct: 442 LKPLLNKSAEELQSMITKRLTEAFERTDEEFLNESERPQAGSTATTVFVAGKHMFVSNVGDSRTVLSRNGKAE 514
BLAST of mRNA_H-elongata_contig76256.15304.1 vs. uniprot
Match: M4BCH9_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BCH9_HYAAE) HSP 1 Score: 64.3 bits (155), Expect = 2.870e-10 Identity = 35/73 (47.95%), Postives = 46/73 (63.01%), Query Frame = 1
Query: 1 LSPLFPHVTCNLRRVIEAAVSQAFLAADEEFLTTSGKPSAGSTATTAIILGDRFYSFNVGDSRTVLCRSGRAE 219
L PL L+ +I ++ AF DEEFL S +P AGSTATT ++ G+ + NVGDSRTVL R+G+AE
Sbjct: 478 LRPLVDKSPEELQSMITKRLTDAFEQTDEEFLNGSERPQAGSTATTVLVAGNYIFVSNVGDSRTVLSRAGKAE 550
BLAST of mRNA_H-elongata_contig76256.15304.1 vs. uniprot
Match: A0A2D4CJ68_PYTIN (Uncharacterized protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CJ68_PYTIN) HSP 1 Score: 63.9 bits (154), Expect = 3.900e-10 Identity = 33/62 (53.23%), Postives = 43/62 (69.35%), Query Frame = 1
Query: 31 NLRRVIEAAVSQAFLAADEEFLTTSGKPSAGSTATTAIILGDRFYSFNVGDSRTVLCRSGRA 216
+L R++E ++ AF DEEFLT+S +P AGSTATT G++ + NVGDSRTVL R G A
Sbjct: 374 DLFRIVEESLVMAFERTDEEFLTSSERPQAGSTATTVFFAGNQMFVANVGDSRTVLSRRGLA 435
BLAST of mRNA_H-elongata_contig76256.15304.1 vs. uniprot
Match: A0A7S2GBR9_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GBR9_9STRA) HSP 1 Score: 63.5 bits (153), Expect = 5.280e-10 Identity = 32/58 (55.17%), Postives = 43/58 (74.14%), Query Frame = 1
Query: 43 VIEAAVSQAFLAADEEFLTTSGKPSAGSTATTAIILGDRFYSFNVGDSRTVLCRSGRA 216
++ A + ++FL D +FL TS + AGSTATT ++LG+R Y NVGDSRTVLCR+G A
Sbjct: 311 IVRAGLKESFLGIDRKFLETSEQ--AGSTATTVLVLGNRAYCANVGDSRTVLCRNGEA 366
BLAST of mRNA_H-elongata_contig76256.15304.1 vs. uniprot
Match: A0A836CBM8_9STRA (Phosphatase 2C-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBM8_9STRA) HSP 1 Score: 63.2 bits (152), Expect = 7.280e-10 Identity = 33/62 (53.23%), Postives = 42/62 (67.74%), Query Frame = 1
Query: 43 VIEAAVSQAFLAADEEFLTTSGKPSAGSTATTAIILGDRFYSFNVGDSRTVLCRSGRAELAS 228
+++ A +AF A D+ F+ S P AGSTATTA+ILG R Y NVGDSRT++ R GR AS
Sbjct: 377 LVKQAFMEAFKATDDAFIKDSEHPQAGSTATTALILGGRVYVANVGDSRTIITREGRVLAAS 438 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig76256.15304.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig76256.15304.1 >prot_H-elongata_contig76256.15304.1 ID=prot_H-elongata_contig76256.15304.1|Name=mRNA_H-elongata_contig76256.15304.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=76bp LSPLFPHVTCNLRRVIEAAVSQAFLAADEEFLTTSGKPSAGSTATTAIILback to top mRNA from alignment at H-elongata_contig76256:528..755- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig76256.15304.1 ID=mRNA_H-elongata_contig76256.15304.1|Name=mRNA_H-elongata_contig76256.15304.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=228bp|location=Sequence derived from alignment at H-elongata_contig76256:528..755- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig76256:528..755- >mRNA_H-elongata_contig76256.15304.1 ID=mRNA_H-elongata_contig76256.15304.1|Name=mRNA_H-elongata_contig76256.15304.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=456bp|location=Sequence derived from alignment at H-elongata_contig76256:528..755- (Himanthalia elongata Himel1 dioecious)back to top |