mRNA_H-elongata_contig76218.15300.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig76218.15300.1 vs. uniprot
Match: D7G1P2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1P2_ECTSI) HSP 1 Score: 279 bits (714), Expect = 1.760e-88 Identity = 155/185 (83.78%), Postives = 173/185 (93.51%), Query Frame = 1
Query: 1 GEKQAAAANANVAKKMAMERVSHSTKIDVFENAFRKIKEATGVSDVNEVIQKIISQDSTAESLMNLTKENQAKIESLNKRKAALRAAVEDVKYSGPGEGHRRKMVDDHEELVSNSLARLERVRHKHERQTKILISVKAGVEHLQDKLKSTADEVGVETMTMTDETLVDVLEVAEKVLVKVTDRIK 555
G K+AAAANAN KM M+RVSH +KIDVFENAFRKIKEATGVSDVNEVIQK+ISQ+STAESLM LTKENQA+IE LNKRK++L+AAVE+VKYSGPGEGHRRKMVDDHEEL+SNS+ARLERVRHKHER +KILISVKAGVEHLQDKLKSTA EVGVE M MTDET+VDVLEVAEKVLV+V++R+K
Sbjct: 271 GLKKAAAANANTTAKMVMDRVSHKSKIDVFENAFRKIKEATGVSDVNEVIQKMISQESTAESLMILTKENQARIEGLNKRKSSLKAAVEEVKYSGPGEGHRRKMVDDHEELLSNSVARLERVRHKHERLSKILISVKAGVEHLQDKLKSTATEVGVEPMVMTDETVVDVLEVAEKVLVEVSERVK 455
BLAST of mRNA_H-elongata_contig76218.15300.1 vs. uniprot
Match: A0A7S2SGG0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SGG0_9STRA) HSP 1 Score: 192 bits (489), Expect = 2.460e-55 Identity = 109/183 (59.56%), Postives = 141/183 (77.05%), Query Frame = 1
Query: 7 KQAAAANANVAKKMAMERVSHSTKIDVFENAFRKIKEATGVSDVNEVIQKIISQDSTAESLMNLTKENQAKIESLNKRKAALRAAVEDVKYSGPGEGHRRKMVDDHEELVSNSLARLERVRHKHERQTKILISVKAGVEHLQDKLKSTADEVGVETMTMTDETLVDVLEVAEKVLVKVTDRIK 555
++AAA NA A ++ ER+ KID+FE AFRKIK+ATGVSDVNEVIQKIISQ+ T E+LM LTKENQAKIE LN KA ++A VE+VKYSGPG GHRRKMVDDHEE ++++ RLER + K+ER K+LIS+KAGV+HLQDKL +++G + +TDET+V VL E++ + +T R+K
Sbjct: 268 RKAAAVNAITATMISQERLEQKNKIDIFEQAFRKIKDATGVSDVNEVIQKIISQEGTTENLMLLTKENQAKIEQLNDTKAGMKARVEEVKYSGPGGGHRRKMVDDHEEQLTSAATRLERCKLKYERLAKMLISIKAGVKHLQDKLAPVREDLGGRELDLTDETVVAVLVETERMSLTLTSRMK 450
BLAST of mRNA_H-elongata_contig76218.15300.1 vs. uniprot
Match: A0A7S1TV28_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TV28_9STRA) HSP 1 Score: 182 bits (461), Expect = 2.980e-51 Identity = 105/168 (62.50%), Postives = 126/168 (75.00%), Query Frame = 1
Query: 55 ERVSHSTKIDVFENAFRKIKEATGVSDVNEVIQKIISQDSTAESLMNLTKENQAKIESLNKRKAALRAAVEDVKYSGPGEGHRRKMVDDHEELVSNSLARLERVRHKHERQTKILISVKAGVEHLQDKLKSTADEVGVET-MTMTDETLVDVLEVAEKVLVKVTDRIK 555
E+ H +KID+FENAFRKIKEATGVSDVNEVIQKI+SQ+ TAESLM LTKENQ KIE N+ K LR +E++KYSG GHRRKMVDD EE VS S RLER R K+ER K LIS KAGVEHLQDKL S DE+ ++ + +TD+ +V+VL +E L K+ R+K
Sbjct: 293 EKAEHQSKIDIFENAFRKIKEATGVSDVNEVIQKIVSQEGTAESLMVLTKENQQKIEKYNETKNDLRRKIEEIKYSGANSGHRRKMVDDREEQVSASATRLERSRLKYERLAKSLISAKAGVEHLQDKLASVRDELNLDAPIDLTDDMVVEVLRQSETALEKMLQRVK 460
BLAST of mRNA_H-elongata_contig76218.15300.1 vs. uniprot
Match: A0A8K1FFT5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FFT5_PYTOL) HSP 1 Score: 180 bits (457), Expect = 3.570e-50 Identity = 101/171 (59.06%), Postives = 136/171 (79.53%), Query Frame = 1
Query: 46 MAMERVSHSTKIDVFENAFRKIKEATGVSDVNEVIQKIISQDSTAESLMNLTKENQAKIESLNKRKAALRAAVEDVKYSGPGEGHRRKMVDDHEELVSNSLARLERVRHKHERQTKILISVKAGVEHLQDKLKSTADEVGVETMTMTDETLVDVLEVAEKVLVKVTDRIKV 558
+A ER H +KID+FE+AFRKIKEATGVSDVNEVIQKI+SQ+ST ++L+NL+KENQ ++E L AAL+A VE++KYSG G GHRRKMVDDHE+ ++ + A+LER + K+ER K+LISVKAGVEHL DKL+S D+ V + +TDET+VD L+ +E L ++ +++KV
Sbjct: 314 VAEERKEHRSKIDIFESAFRKIKEATGVSDVNEVIQKIVSQESTTDNLINLSKENQVRLEHLQSEHAALKARVEELKYSGSGGGHRRKMVDDHEQNLALASAKLERAKLKYERLAKVLISVKAGVEHLVDKLESVRDDDQV--VIVTDETIVDALQESEMTLTRLMNQVKV 482
BLAST of mRNA_H-elongata_contig76218.15300.1 vs. uniprot
Match: A0A2D4C5M1_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C5M1_PYTIN) HSP 1 Score: 179 bits (453), Expect = 1.310e-48 Identity = 100/168 (59.52%), Postives = 134/168 (79.76%), Query Frame = 1
Query: 55 ERVSHSTKIDVFENAFRKIKEATGVSDVNEVIQKIISQDSTAESLMNLTKENQAKIESLNKRKAALRAAVEDVKYSGPGEGHRRKMVDDHEELVSNSLARLERVRHKHERQTKILISVKAGVEHLQDKLKSTADEVGVETMTMTDETLVDVLEVAEKVLVKVTDRIKV 558
E+ H +KID+FE+AFRKIKEATGVSDVNEVIQKI+SQ+ST ++L+NL+KENQA++E L AL+A VE++KYSG G GHRRKMVDDHE+ ++ + A+LER + K+ER K+LISVKAGVEHL DKL+S D+ V + +TDET+VD L+ +E +L ++ +IKV
Sbjct: 935 EKKEHRSKIDIFESAFRKIKEATGVSDVNEVIQKIVSQESTTDNLINLSKENQARLEHLQAEHTALKARVEELKYSGSGGGHRRKMVDDHEQNLALATAKLERAKLKYERLAKVLISVKAGVEHLVDKLESVRDDDQV--VVVTDETIVDALQESETILGRLISQIKV 1100
BLAST of mRNA_H-elongata_contig76218.15300.1 vs. uniprot
Match: A0A7S3ZSK6_9STRA (Hypothetical protein n=5 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZSK6_9STRA) HSP 1 Score: 173 bits (438), Expect = 4.750e-48 Identity = 96/168 (57.14%), Postives = 129/168 (76.79%), Query Frame = 1
Query: 55 ERVSHSTKIDVFENAFRKIKEATGVSDVNEVIQKIISQDSTAESLMNLTKENQAKIESLNKRKAALRAAVEDVKYSGPGEGHRRKMVDDHEELVSNSLARLERVRHKHERQTKILISVKAGVEHLQDKLKSTADEVGVETMTMTDETLVDVLEVAEKVLVKVTDRIKV 558
ER TKID+FE AFRKIKEATGVSDVNEVIQKII Q+ST E+LM+LT++NQ KIE+L+++K ++ VE+VKYSGPG GHRRK+VD HE ++++ ARLER R KHER T+++I+VKAGV+HLQDKL +E+G + +TD T V+ E ++ ++ RI+V
Sbjct: 281 ERTEQRTKIDIFERAFRKIKEATGVSDVNEVIQKIIVQESTTENLMSLTRDNQQKIEALSEQKVGIKMHVEEVKYSGPGGGHRRKLVDKHEAQLASAAARLERCRIKHERLTRMVIAVKAGVKHLQDKLDGVREELGGRHIQLTDATTFRVMAENEIIMAELMARIRV 448
BLAST of mRNA_H-elongata_contig76218.15300.1 vs. uniprot
Match: K3W817_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W817_GLOUD) HSP 1 Score: 169 bits (428), Expect = 6.180e-46 Identity = 96/167 (57.49%), Postives = 128/167 (76.65%), Query Frame = 1
Query: 55 ERVSHSTKIDVFENAFRKIKEATGVSDVNEVIQKIISQDSTAESLMNLTKENQAKIESLNKRKAALRAAVEDVKYSGPGEGHRRKMVDDHEELVSNSLARLERVRHKHERQTKILISVKAGVEHLQDKLKSTADEVGVETMTMTDETLVDVLEVAEKVLVKVTDRIK 555
E+ H +KID+FE+AFRKIKEATGVSDVNEVIQKI SQ+ST ++L+NL+KENQA++E L L+A VE++KYSG G GHRRKMVDDHE+ + + A+LER + K+ER K+ I VKAGVEHL DKL+ D+ V + +TDET+VD L+ +E LV++ ++IK
Sbjct: 317 EKKEHRSKIDIFESAFRKIKEATGVSDVNEVIQKITSQESTTDNLINLSKENQARVEQLQAEHNNLKARVEELKYSGSGGGHRRKMVDDHEQNLVLASAKLERAKLKYERLAKVFIGVKAGVEHLVDKLECVRDDDQV--VVVTDETIVDALQESEMTLVRLLNQIK 481
BLAST of mRNA_H-elongata_contig76218.15300.1 vs. uniprot
Match: A0A662Y3D2_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y3D2_9STRA) HSP 1 Score: 165 bits (417), Expect = 2.000e-44 Identity = 93/167 (55.69%), Postives = 128/167 (76.65%), Query Frame = 1
Query: 55 ERVSHSTKIDVFENAFRKIKEATGVSDVNEVIQKIISQDSTAESLMNLTKENQAKIESLNKRKAALRAAVEDVKYSGPGEGHRRKMVDDHEELVSNSLARLERVRHKHERQTKILISVKAGVEHLQDKLKSTADEVGVETMTMTDETLVDVLEVAEKVLVKVTDRIK 555
E+ H +KID+FE+AFRKIKEATGVSDVNEVIQKI SQ+ST ++L+NL+KENQA++E L AAL+A VE++KYS GHRRK+VDDHE+ + + A+LER + K+ER K+LI VKAGVEHL DK++S ++ V + +TDET+V+ L+ +E L ++ +IK
Sbjct: 319 EKKEHRSKIDIFESAFRKIKEATGVSDVNEVIQKITSQESTTDNLLNLSKENQARLERLQAEHAALKARVEELKYSSSSGGHRRKLVDDHEQNLVLASAKLERAKLKYERLAKVLIGVKAGVEHLVDKMESVREDDQV--IAVTDETIVEALQESEVTLTRLLSQIK 483
BLAST of mRNA_H-elongata_contig76218.15300.1 vs. uniprot
Match: A0A3R7G3K7_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7G3K7_9STRA) HSP 1 Score: 164 bits (416), Expect = 2.850e-44 Identity = 92/167 (55.09%), Postives = 127/167 (76.05%), Query Frame = 1
Query: 55 ERVSHSTKIDVFENAFRKIKEATGVSDVNEVIQKIISQDSTAESLMNLTKENQAKIESLNKRKAALRAAVEDVKYSGPGEGHRRKMVDDHEELVSNSLARLERVRHKHERQTKILISVKAGVEHLQDKLKSTADEVGVETMTMTDETLVDVLEVAEKVLVKVTDRIK 555
E+ H +KID+FE+AFRKIKEATGVSDVNEVIQKI SQ+ST ++L+NL+KENQA++E L L+A VE++KYSG G GHRRK+VDDHE+ ++ + +LER + K+ER K+LI VKAGVEHL DK++S ++ V + +TDET+V+ L+ +E L + +IK
Sbjct: 319 EKKEHRSKIDIFESAFRKIKEATGVSDVNEVIQKITSQESTTDNLLNLSKENQARLERLQAEHTVLKARVEELKYSGSGGGHRRKLVDDHEQNLALASTKLERAKLKYERLAKVLIGVKAGVEHLVDKMESVREDDQV--IVVTDETIVEALQESEITLAHLLSQIK 483
BLAST of mRNA_H-elongata_contig76218.15300.1 vs. uniprot
Match: H3GET3_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GET3_PHYRM) HSP 1 Score: 164 bits (415), Expect = 3.800e-44 Identity = 92/167 (55.09%), Postives = 126/167 (75.45%), Query Frame = 1
Query: 55 ERVSHSTKIDVFENAFRKIKEATGVSDVNEVIQKIISQDSTAESLMNLTKENQAKIESLNKRKAALRAAVEDVKYSGPGEGHRRKMVDDHEELVSNSLARLERVRHKHERQTKILISVKAGVEHLQDKLKSTADEVGVETMTMTDETLVDVLEVAEKVLVKVTDRIK 555
E+ H +KID+FE+AFRKIKEATGVSDVNEVIQKI SQ+ST ++L+NL+KENQA++E L L+A VE++KYSG G GHRRK+VDDHE+ + + +LER + K+ER K+LI VKAGVEHL DK++S ++ V + +TDET+V+ L+ +E L + +IK
Sbjct: 319 EKKEHRSKIDIFESAFRKIKEATGVSDVNEVIQKITSQESTTDNLLNLSKENQARLERLQAEHTVLKARVEELKYSGSGGGHRRKLVDDHEQNLVLASTKLERAKLKYERLAKVLIGVKAGVEHLVDKMESVREDDQV--IVVTDETIVEALQESETTLAHLLSQIK 483 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig76218.15300.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig76218.15300.1 >prot_H-elongata_contig76218.15300.1 ID=prot_H-elongata_contig76218.15300.1|Name=mRNA_H-elongata_contig76218.15300.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=186bp GEKQAAAANANVAKKMAMERVSHSTKIDVFENAFRKIKEATGVSDVNEVIback to top mRNA from alignment at H-elongata_contig76218:167..2074+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig76218.15300.1 ID=mRNA_H-elongata_contig76218.15300.1|Name=mRNA_H-elongata_contig76218.15300.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1908bp|location=Sequence derived from alignment at H-elongata_contig76218:167..2074+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig76218:167..2074+ >mRNA_H-elongata_contig76218.15300.1 ID=mRNA_H-elongata_contig76218.15300.1|Name=mRNA_H-elongata_contig76218.15300.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1116bp|location=Sequence derived from alignment at H-elongata_contig76218:167..2074+ (Himanthalia elongata Himel1 dioecious)back to top |