mRNA_H-elongata_contig76085.15288.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig76085.15288.1 vs. uniprot
Match: A0A2R6PCF8_9APHY (Uncharacterized protein n=1 Tax=Hermanssonia centrifuga TaxID=98765 RepID=A0A2R6PCF8_9APHY) HSP 1 Score: 209 bits (532), Expect = 3.090e-57 Identity = 126/348 (36.21%), Postives = 184/348 (52.87%), Query Frame = 1
Query: 10 TMGEAQASSEWPQWKREIAREMDGQTARGVWQVVERPKAKTVLSTRVVFKRKIDNDGRIEKYKCRLVAQGFRQVKGIHYKESSSPTPAQASIRMVLNTIAALGWKVRQLDVGMVYLEADVEED--IYVELPEAYL--DSRNQVGLRKKAMYGLVHAGLLWSKQFGIELEAKGFQRSQAN--------------------PC----------EQAVRDLCSCFPIKDLGEASYYLGCHIRWDRNAGTLKFDQHQYIQTVVESFGVT--KTSIVPSAAGGKALSKSDSPQTDAEVEEMR*ITYREIVGALM*AATMTRPDISFAAHQLAKFNDNPGPTHWRAAQKALQYL 945
T+ EA+ +WP+W I E++ G W++V+RP A V+ ++ V + K D G I+KYK RLVAQGF Q+ GI Y E+ +P +SIR++L A GW ++ D YL + +++D IY+E P + D +N V +KA+YGL G W + I L GF R++++ C + R + +P+ DLGE S+ LG + DR A TL QH YI +++ F T K S +P + L+KS P + A++ MR I YRE +G+LM AA TRPDISFA LA+F+ NPG THW A ++ +YL
Sbjct: 965 TLEEARKRPDWPKWLAAIRAELESLKLNGTWELVDRPSAVNVVGSKWVLRIKKDASGAIDKYKARLVAQGFTQIHGIDYFETFAPVAKLSSIRLILAIAARNGWDIQSFDFNSAYLNSTLDDDEVIYLEQPPDFAEKDPKNYVLRLRKALYGLKQGGRKWYEHLCIALADLGFNRAESDYGVFFAIDANNITVLAIHVDDCAITGSSTPLISEYKRRIGEKYPLTDLGEVSWLLGIKVARDREARTLSLSQHAYIDSILARFNFTDLKPSSIPMDPNLQ-LTKSQCPTSLADIARMRKIPYREAIGSLMYAAVGTRPDISFAISTLAQFSQNPGWTHWEAVKRVFRYL 1311
BLAST of mRNA_H-elongata_contig76085.15288.1 vs. uniprot
Match: A0A401H6Z2_9APHY (Integrase catalytic domain-containing protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401H6Z2_9APHY) HSP 1 Score: 208 bits (530), Expect = 5.430e-57 Identity = 125/349 (35.82%), Postives = 185/349 (53.01%), Query Frame = 1
Query: 1 EPTTMGEAQASSEWPQWKREIAREMDGQTARGVWQVVERPKAKTVLSTRVVFKRKIDNDGRIEKYKCRLVAQGFRQVKGIHYKESSSPTPAQASIRMVLNTIAALGWKVRQLDVGMVYLEADVEEDIYVELP--EAYLDSRNQVGLRKKAMYGLVHAGLLWSKQFGIELEAKGFQRSQANPC------EQAV-------------------------RDLCSCFPIKDLGEASYYLGCHIRWDRNAGTLKFDQHQYIQTVVESFGVTKT-SIVPSAAGGKALSKSDSPQTDAEVEEMR*ITYREIVGALM*AATMTRPDISFAAHQLAKFNDNPGPTHWRAAQKALQYL 945
+P ++ EA S+EWP+W IA+EM + G + +VE PK ++ ++ VF+ K + +G IE YK RLVAQGF QV GI + E+ +P ASIR++L A W++ Q+DV VYL D+EE+IY+ P +A + V K+ +YGL +G + K+ EL + G RS+ + C E+ V R++ F + DLGE + LG +R DR+A TL Q YI ++ F + S+ G LS P T + E+M+ I YRE +G+LM AA TRPDI++A L++F NPG HW AA++ +YL
Sbjct: 744 DPASLNEAMQSTEWPKWTEAIAKEMQNLDSHGTYTLVEPPKNTNIVGSKFVFRIKHNAEGEIESYKARLVAQGFTQVPGIDFNETFAPVAKLASIRLILTLAAHYDWELHQMDVKGVYLNGDLEEEIYMWQPPGQAEPGKEHLVCRLKRPLYGLKQSGRQFHKKISGELGSMGLTRSKVDHCIFWLRNEEDVLILLIALSVDDSTIAGTKAAVFWFKREISMHFEMSDLGEMHWILGIEVRRDRDARTLSLSQCAYIDMILARFNLQDAKSLTTPLDPGTVLSIHQCPSTPRQFEDMKNIPYREAIGSLMYAALGTRPDIAYAVTALSQFMKNPGRPHWEAAKRVFRYL 1092
BLAST of mRNA_H-elongata_contig76085.15288.1 vs. uniprot
Match: A0A6A3JRZ2_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3JRZ2_9STRA) HSP 1 Score: 190 bits (483), Expect = 9.870e-55 Identity = 120/331 (36.25%), Postives = 168/331 (50.76%), Query Frame = 1
Query: 28 ASSEWPQWKREIAREMDGQTARGVWQVVERPKAKTVLSTRVVFKRKIDNDGRIEKYKCRLVAQGFRQVKGIHYKESSSPTPAQASIRMVLNTIAALGWKVRQLDVGMVYLEADVEEDIYVELPEAYLDSRNQVGLRKKAMYGLVHAGLLWSKQFGIELEAKGFQRSQANPCEQAVRD------------------------------LCSCFPIKDLGEASYYLGCHIRWDRNAGTLKFDQHQYIQTVVESFGVTKTSIV--PSAAGGKALSKSDSPQTDAEVEEMR*ITYREIVGALM*AATMTRPDISFAAHQLAKFNDNPGPTHWRAA 924
AS + QW+ + E+ G W +V R A + R VF +K D GR+ +YK RLVA+GF+Q GI + E+ SP SIR+VL+ AA +++ QLD +L +++++ +Y+E+P ++R+ KA+YGL A W+K GF+ A+ C R L + F +K+LG A + LG I D AGTLK Q +YI VV+ FG V P AAG K LSK+ SP TDAE MR YR ++G L+ T TRPDI+F A QL++F +NPG HW AA
Sbjct: 2 ASDDAAQWREAMDAELLSHERNGTWTLVPRGTANRTIGCRWVFAKKRDQYGRVVRYKARLVAKGFKQKYGIDFFETYSPVANMNSIRVVLSVCAAYEYRMEQLDADTAFLNSELKDRVYMEVPFGIENARDYQYQLNKAIYGLKQAASAWNKTIHRVFLGNGFKSCGADQCVYVKRSKNGFIYVCLYVDDMIIAAKTSEDIREVKDALKNAFKMKELGPAKFILGMEIDHDMTAGTLKIKQTRYIDDVVKRFGQENAKPVDNPCAAGLK-LSKTQSPGTDAEQNAMRSKPYRSLIGCLLYITTCTRPDIAFMATQLSRFLENPGQQHWNAA 331
BLAST of mRNA_H-elongata_contig76085.15288.1 vs. uniprot
Match: A0A401GQU1_9APHY (Uncharacterized protein n=3 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GQU1_9APHY) HSP 1 Score: 202 bits (513), Expect = 1.070e-54 Identity = 126/353 (35.69%), Postives = 182/353 (51.56%), Query Frame = 1
Query: 1 EPTTMGEAQASSEWPQWKREIAREMDGQTARGVWQVVERPKAKTVLSTRVVFKRKIDNDGRIEKYKCRLVAQGFRQVKGIHYKESSSPTPAQASIRMVLNTIAALGWKVRQLDVGMVYLEADVEEDIYVELP--EAYLDSRNQVGLRKKAMYGLVHAGLLWSKQFGIELEAKGFQRSQANPC---------------------------EQAV----RDLCSCFPIKDLGEASYYLGCHIRWDRNAGTLKFDQHQYIQTVVESFGVT-----KTSIVPSAAGGKALSKSDSPQTDAEVEEMR*ITYREIVGALM*AATMTRPDISFAAHQLAKFNDNPGPTHWRAAQKALQYL 945
EP ++ EA S +WPQW++ I +EM + +VE P+ V+ ++ VF+ K + +G+IE YK RLVAQGF Q+ GI + ++ +P ASIR++L A W V Q+DV YL AD+EE+I+++ P +A + V L + A+YGL +G W K+ L+ G RS + C AV ++ F + DLGE + LG +R DR A TL Q YI ++ F + T + P G LS P T E E+MR + YRE +G+LM AA TRPDI+FA L++F NPG HW AA++ L+YL
Sbjct: 959 EPRSLEEAMQSPDWPQWQKAIEKEMRNLRDHHTYDLVEPPENTNVVGSKFVFRIKRNANGKIESYKARLVAQGFSQIPGIDFNDTFAPVAKLASIRIILALAARHDWDVHQMDVKGAYLNADLEEEIFMKQPPGQAKRGKEHWVCLLRHAIYGLKQSGRQWFKKMCAALDEMGLSRSLVDHCVFYLDEDDDSVTLIIALSVDDTTIAGTNNAVLWFKTEISKRFEMTDLGEMHWILGIEVRRDRAARTLSLSQRAYIDGLMARFNLEDAKPLSTPLEP----GAILSIRQCPSTPREFEDMRNVPYREAIGSLMYAALGTRPDIAFAVTALSQFMQNPGRAHWEAAKRVLRYL 1307
BLAST of mRNA_H-elongata_contig76085.15288.1 vs. uniprot
Match: A0A060SPD4_PYCCI (Integrase catalytic domain-containing protein n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060SPD4_PYCCI) HSP 1 Score: 199 bits (505), Expect = 1.210e-53 Identity = 120/342 (35.09%), Postives = 173/342 (50.58%), Query Frame = 1
Query: 19 EAQASSEWPQWKREIAREMDGQTARGVWQVVERPKAKTVLSTRVVFKRKIDNDGRIEKYKCRLVAQGFRQVKGIHYKESSSPTPAQASIRMVLNTIAALGWKVRQLDVGMVYLEADVEEDIYVELP--EAYLDSRNQVGLRKKAMYGLVHAGLLWSKQFGIELEAKGFQRSQAN--------------------PC----------EQAVRDLCSCFPIKDLGEASYYLGCHIRWDRNAGTLKFDQHQYIQTVVESFGVTKTSIVPSAAGG-KALSKSDSPQTDAEVEEMR*ITYREIVGALM*AATMTRPDISFAAHQLAKFNDNPGPTHWRAAQKALQYL 945
EA+ +WP+W+ I E+D A G W++V RP + V+ ++ V + K + G I+KYK RLVA+GF QV G+ Y ++ +P +SIR++L A GW D YL + ++ED+Y+E P A+ D + V +KA+YGL G W + L GF R +A+ C + + + + I DLG S+ LG I D AGTL QH YI+ ++ F T V + LSK+ P++ AEV MR + YRE +GALM AA TRPDI+FA LA+F NPG HW A ++ +YL
Sbjct: 803 EAKKRPDWPKWQEAIKAELDSLVANGTWRIVPRPSSGNVVDSKWVLRVKKNAAGEIDKYKARLVARGFTQVYGVDYYDTFAPVAKLSSIRLLLAIAARNGWAADSFDFNSAYLNSKLDEDVYLEQPPDHAFADRKAFVLKLEKALYGLKQGGRKWYETLCAALGRLGFTRVEADWGVFYKHEGEHLIVLAVHVDDCLLTGSSRRLLDDTKSKIGTVYKITDLGPVSWLLGIKISCDLEAGTLSLSQHAYIEALLARFNFTDLKPVSMPMDPHQLLSKTQCPESPAEVARMRRVPYREAIGALMYAALGTRPDIAFAVSTLAQFAQNPGQPHWDAVKRIFRYL 1144
BLAST of mRNA_H-elongata_contig76085.15288.1 vs. uniprot
Match: A0A1M2V3W8_TRAPU (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Trametes pubescens TaxID=154538 RepID=A0A1M2V3W8_TRAPU) HSP 1 Score: 196 bits (497), Expect = 6.680e-53 Identity = 122/346 (35.26%), Postives = 178/346 (51.45%), Query Frame = 1
Query: 1 EPTTMGEAQASSEWPQWKREIAREMDGQTARGVWQVVERPKAKTVLSTRVVFKRKIDNDGRIEKYKCRLVAQGFRQVKGIHYKESSSPTPAQASIRMVLNTIAALGWKVRQLDVGMVYLEADVEEDIYVELPEAYLDSRNQVGLRKKAMYGLVHAGLLWSKQFGIELEAK-GFQRSQANPCEQ-------------------AVRD-----------LCSCFPIKDLGEASYYLGCHIRWDRNAGTLKFDQHQYIQTVVESFGVTKTSIVPSAAGGKALSKSDSPQTDAEVEEMR*ITYREIVGALM*AATMTRPDISFAAHQLAKFNDNPGPTHWRAAQKALQYL 945
EP T+ EAQA+ EWP+WKR + E+ G + + P + + R V++ K D+DGRI +YK RLVAQGF Q G+ Y E+ +P S+R++L A ++ Q DV YL AD++E+IY+ P Y + + + +KA+YGL AG W+ L A GFQR ++PC A+ D L + I DLG LG I DR TL Q QYIQTV++ F + + V + K DA++ EM+ + Y+ ++G+LM AA TRPDIS+A L++++ PG THW AA++ L+YL
Sbjct: 14 EPRTLSEAQAAPEWPEWKRAMDDEIAQLRKLGTYAPADLPAGRKPIGCRWVYRLKRDSDGRIVRYKARLVAQGFSQAPGLDYFETFAPVIRTDSLRLLLAIAAERNMELAQFDVVGAYLNADLDEEIYMRQPPGYEEGSSPIVRLRKALYGLKQAGXQWNHHINKVLTADLGFQRLNSDPCVYLKKSPKGLTIVGMHVDDMAALADTPDLMDTLRSGLARHYKITDLGTPRLLLGFEISRDRKKRTLSIKQSQYIQTVLDRFKMADCNPVTTPLDPNV--KLCKEPEDADLSEMKGVPYQALIGSLMYAALGTRPDISYAVQALSQYSARPGITHWTAAKRVLRYL 357
BLAST of mRNA_H-elongata_contig76085.15288.1 vs. uniprot
Match: E2LZP6_MONPE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Moniliophthora perniciosa (strain FA553 / isolate CP02) TaxID=554373 RepID=E2LZP6_MONPE) HSP 1 Score: 191 bits (485), Expect = 1.610e-52 Identity = 117/332 (35.24%), Postives = 170/332 (51.20%), Query Frame = 1
Query: 1 EPTTMGEAQASSEWPQWKREIAREMDGQTARGVWQVVERPKAKTVLSTRVVFKRKIDNDGRIEKYKCRLVAQGFRQVKGIHYKESSSPTPAQASIRMVLNTIAALGWKVRQLDVGMVYLEADVEEDIYVELPEAYLDSRNQVGLR-KKAMYGLVHAGLLWSKQFGIELEAKG--------------FQRSQANPCEQAVRDLCSCFPIKDLGEASYYLGCHIRWDRNAGTLKFDQHQYIQTVVESFGVT--KTSIVPSAAGGKALSKSDSPQTDAEVEEMR*ITYREIVGALM*AATMTRPDISFAAHQLAKFNDNPGPTHWRAAQKALQYL 945
EP T +A S QW+ + EM + G W +VE P + + ++ V++ K DG IE++K RLVA+GF Q G Y E+ + T Q ++R VL A +R +D+ ++ +D++ +IY+ PE + ++ R K++YGL A LW ++ GI + + ++ V L F ++DLG SY LG I +R L Q QYI +E FG+T K + P LSKS SPQT EVEEM I Y VG+L+ ATMTRPDI++ A LA+FN NPG HW+A + L+YL
Sbjct: 103 EPVTYRQAITSPNAEQWQEAMIEEMTAHLSNGTWNLVELPPGQKAIGSKWVYRIKHKADGSIERFKARLVAKGFSQRLGFDYSETFASTMRQNTLRTVLALAAVEDLHLRSIDISHAFINSDIDTEIYMTQPEGFRQGGPRIVCRLDKSLYGLKQAPRLWDEKLGIYIYQNDNVKVIVPVFVDDITLASKSEDMLDEFVAKLSKHFKLRDLGATSYLLGVEITRNRPERKLYLSQRQYIINKLEEFGMTDCKPATTPMTPN-LILSKSQSPQTPDEVEEMSEIPYISAVGSLLYLATMTRPDIAYTASVLARFNSNPGMDHWKAVKHVLRYL 433
BLAST of mRNA_H-elongata_contig76085.15288.1 vs. uniprot
Match: A0A6A4CLK4_9STRA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=10 Tax=Phytophthora TaxID=4783 RepID=A0A6A4CLK4_9STRA) HSP 1 Score: 188 bits (478), Expect = 3.470e-52 Identity = 120/339 (35.40%), Postives = 173/339 (51.03%), Query Frame = 1
Query: 28 ASSEWPQWKREIAREMDGQTARGVWQVVERPKAKTVLSTRVVFKRKIDNDGRIEKYKCRLVAQGFRQVKGIHYKESSSPTP-AQASIRMVLNTIAALGWKVRQLDVGMVYLEADVEEDIYVELPEAYLDSRNQVGLRKKAMYGLVHAGLLWSKQFGIELEAKGFQRSQANPC--------------------------EQAVRD----LCSCFPIKDLGEASYYLGCHIRWDRNAGTLKFDQHQYIQTVVESFGVTKTSIV--PSAAGGKALSKSDSPQTDAEVEEMR*ITYREIVGALM*AATMTRPDISFAAHQLAKFNDNPGPTHWRAAQKALQYL 945
AS + QW+ + E+ G W +V R A + R VF +K D GR+ +YK RLVA+GF+Q GI + E+ SP +++R+VL+ AA +++ QLD +L +++++ +Y+E+P ++R KA+YGL A W+K GF+ A+ C + +RD L + F +K+LG A + LG I D AGTLK +YI VVE FG V P AAG K LSK+ SP TDAE MR YR ++G L+ T TRPDI+F QL++F +NP HW AA + L+YL
Sbjct: 2 ASDDAEQWREAMDAELLSHERNGTWTLVPRGTASRTIGCRWVFAKKRDQYGRVVRYKARLVAKGFKQKYGIDFFETYSPVANMNSTLRVVLSVCAAYEYRMEQLDADTAFLNSELKDRVYMEVPFGIENARGYQYQLNKAIYGLKQAASAWNKTIHRVFLGNGFKSCGADQCVYVKRSKNGFIYVCLYVDDMIIAAKTSEEIRDVKDALKNAFKMKELGPAKFILGMEIDHDMTAGTLKIKPTRYIDDVVEHFGQENAKPVDNPCAAGLK-LSKTQSPGTDAEQNAMRSKPYRSLIGCLLYITTCTRPDIAFVVTQLSRFLENPEKQHWNAAVRVLRYL 339
BLAST of mRNA_H-elongata_contig76085.15288.1 vs. uniprot
Match: A0A4S4K4Q2_9APHY (Uncharacterized protein n=2 Tax=Hermanssonia centrifuga TaxID=98765 RepID=A0A4S4K4Q2_9APHY) HSP 1 Score: 194 bits (492), Expect = 6.770e-52 Identity = 127/348 (36.49%), Postives = 175/348 (50.29%), Query Frame = 1
Query: 10 TMGEAQASSEWPQWKREIAREMDGQTARGVWQVVERPKAKTVLSTRVVFKRKIDNDGRIEKYKCRLVAQGFRQVKGIHYKESSSPTPAQASIRMVLNTIAALGWKVRQLDVGMVYLEA--DVEEDIYVELPEAYL--DSRNQVGLRKKAMYGLVHAGLLWSKQFGIELEAKGFQRSQAN--------------------PC----------EQAVRDLCSCFPIKDLGEASYYLGCHIRWDRNAGTLKFDQHQYIQTVVESFGVT--KTSIVPSAAGGKALSKSDSPQTDAEVEEMR*ITYREIVGALM*AATMTRPDISFAAHQLAKFNDNPGPTHWRAAQKALQYL 945
T+ EA+ +W +W I E++ W VVERP V+ ++ V + K D G I+KYK RLVAQGF QV G+ Y E+ +P ASIR+VL A GW+V+ D YL + D +E+IY+E P + D + V KKA+YGL G W + I L GF+R++A+ C Q R L + + DLG S+ LG + D A TL QH YI +++ F T K S +P + L KS P + ++ MR I YRE +G+LM AA TRPDISFA LA+F+ NPG HW A ++ +YL
Sbjct: 965 TLEEARKRPDWAKWLAAIKAELESLIRNDTWTVVERPLGVNVVGSKWVLRIKKDATGAIDKYKARLVAQGFTQVYGVDYFETFAPVAKIASIRLVLAIAARNGWEVQSFDFNSAYLNSVLDDDEEIYLEQPPQFSLKDPKLHVLRLKKALYGLKQGGRKWYEHLCIALADLGFKRAEADYGVFYAKVGESLVLLAIHVDDCIITGNSSTLISQYKRQLGDKYSLTDLGPVSWLLGIKVTRDLEARTLSLSQHAYIDSILARFNFTDLKPSSIPMDPNIQFL-KSQCPTSLIDIARMRKIPYREAIGSLMYAAVGTRPDISFAVSTLAQFSHNPGWIHWEAVKRVFRYL 1311
BLAST of mRNA_H-elongata_contig76085.15288.1 vs. uniprot
Match: A0A0A9WI29_LYGHE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9WI29_LYGHE) HSP 1 Score: 180 bits (457), Expect = 3.390e-50 Identity = 104/346 (30.06%), Postives = 174/346 (50.29%), Query Frame = 1
Query: 1 EPTTMGEAQASSEWPQWKREIAREMDGQTARGVWQVVERPKAKTVLSTRVVFKRKIDNDGRIEKYKCRLVAQGFRQVKGIHYKESSSPTPAQASIRMVLNTIAALGWKVRQLDVGMVYLEADVEEDIYVELPEAYLDSRNQVGLRKKAMYGLVHAGLLWSKQFGIELEAKGFQRSQANPC--------------------------EQAVRDLCSC----FPIKDLGEASYYLGCHIRWDRNAGTLKFDQHQYIQTVVESFGVTKT-SIVPSAAGGKALSKSDSPQTDAEVEEMR*ITYREIVGALM*AATMTRPDISFAAHQLAKFNDNPGPTHWRAAQKALQYL 945
EP T +A E WK + E+ VW+ E P KT + ++ VFK K DG +E+YK RLVAQGF Q G+ Y+E+ SP + +IR++ W + Q+DV YL +++E+IY++ P+ + +V +++YGL +G W ++ +L G + ++ PC E+ + ++ F +KDLGE +Y LG ++ + +L+ +Q +YI+ ++ F ++ S+ + K P++D E +EM + YR +VG LM + TRPD+ FA +L +F+ NPG HW AA++ L+YL
Sbjct: 25 EPKTFKQAMEGPESDLWKAAMEEELTSLEVMKVWEFTELPPGKTAIGSKWVFKIKYMADGTVERYKARLVAQGFTQKPGVDYEETYSPVISLPAIRLLFKLAVNNNWIIHQMDVKTAYLNGELKEEIYMKCPDGITGAEGKVCRLLRSLYGLKQSGRSWYEKLDEKLLEGGMNKCKSEPCIYYRRCNENVKIILVYVDDLILISSSEECMVEMKEMLRRNFDMKDLGELNYILGIEVK--KGDHSLRLNQVKYIKEILSEFNMSDCKSVSTPMETNYNIGKQHCPKSDEERKEMEKVPYRRLVGKLMYLSQATRPDLGFAVSKLGQFSSNPGKVHWMAAKRELRYL 368 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig76085.15288.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig76085.15288.1 >prot_H-elongata_contig76085.15288.1 ID=prot_H-elongata_contig76085.15288.1|Name=mRNA_H-elongata_contig76085.15288.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=261bp MGEAQASSEWPQWKREIAREMDGQTARGVWQVVERPKAKTVLSTRVVFKRback to top mRNA from alignment at H-elongata_contig76085:809..1846- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig76085.15288.1 ID=mRNA_H-elongata_contig76085.15288.1|Name=mRNA_H-elongata_contig76085.15288.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1038bp|location=Sequence derived from alignment at H-elongata_contig76085:809..1846- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig76085:809..1846- >mRNA_H-elongata_contig76085.15288.1 ID=mRNA_H-elongata_contig76085.15288.1|Name=mRNA_H-elongata_contig76085.15288.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1566bp|location=Sequence derived from alignment at H-elongata_contig76085:809..1846- (Himanthalia elongata Himel1 dioecious)back to top |