mRNA_H-elongata_contig76002.15282.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig76002.15282.1 vs. uniprot
Match: A0A6A4ZEB5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZEB5_9STRA) HSP 1 Score: 115 bits (289), Expect = 9.290e-27 Identity = 72/212 (33.96%), Postives = 113/212 (53.30%), Query Frame = 1
Query: 1 NLILTEKTVAVHDLLARSDNGVLRRGAAAKVGEKFGNTGCAMLNLSKRYQQQTAAGIAVPDVSCRRRANNKRDVIQQKE----ALQPIPLKLRTTQQSVAAVIGLPKTTFC-HRMKDLGVKSHSRFRKPALTNRDKLDQLRWARSFVSTSAGGTRKFNGIRNVVHVDEKWWYLCQEKQSCYMFDGEALPSSKVQHKSHIPKVMFFGVVGRPR 621
NL +E+ +L S GVL RGA + + G ++ + KR + G +V+ + R N+ R V +++ A++ +P R T +SVAA + +P TT H+M + + S + KP LT+ + +L +A SF+ + G + F+ + ++VHVDEKW+YL + K Y++D E L VQ KSHI KVMF V RPR
Sbjct: 28 NLRDSERRALFERMLEISSRGVLPRGAIVNLAREIGRDRATIMRVWKRGLETRKDGDGAANVASKIRGNSGRKVQRERSDIEAAIRAVPHARRRTLRSVAASVVIPLTTLHRHKMSEPRFSAKSNWLKPRLTDANIKLRLEFAMSFLRSGPGDRQVFSDMHDIVHVDEKWFYLTKNKSVYYIYDDEVLAIRSVQSKSHITKVMFLAAVARPR 239
BLAST of mRNA_H-elongata_contig76002.15282.1 vs. uniprot
Match: A0A6G0WLU8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WLU8_9STRA) HSP 1 Score: 109 bits (272), Expect = 1.880e-24 Identity = 65/212 (30.66%), Postives = 115/212 (54.25%), Query Frame = 1
Query: 1 NLILTEKTVAVHDLLARSDNGVLRRGAAAKVGEKFGNTGCAMLNLSKRYQQQTAAGIAVPDVSCRRR----ANNKRDVIQQKEALQPIPLKLRTTQQSVAAVIGLPKTTFCHRMKD-LGVKSHSRFRKPALTNRDKLDQLRWARSFVSTSAGGTRKFNGIRNVVHVDEKWWYLCQEKQSCYMFDGEALPSSKVQHKSHIPKVMFFGVVGRPR 621
NL +E+ +LLA +++G L G K+ ++ G + + R Q G +V +R+ A K ++ +EA++ + R T +S+A+ G+PKT MK+ +K+ S + KPAL+ ++K + +++A SF+ G F+ + + VHVDEKW+++ + K+ Y++D E L V++KSHI ++MF V RPR
Sbjct: 31 NLTESERRRVYCELLASTNDGNLAPGTFGKIAQQLGCHAKTVQRIWDRGQASIREGAMGANVDSKRKGKCGAKRKHSPLEIEEAIKRVDQIDRQTLRSLASASGIPKTAIVKHMKEEKRLKARSSYVKPALSEKNKEEHMKFALSFLQPGPCGKHIFSNMHDYVHVDEKWFFMAKVKRKFYVYDDEELALRSVKNKSHITEIMFLAAVARPR 242
BLAST of mRNA_H-elongata_contig76002.15282.1 vs. uniprot
Match: B9GBM6_ORYSJ (Uncharacterized protein n=1 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=B9GBM6_ORYSJ) HSP 1 Score: 103 bits (257), Expect = 1.120e-22 Identity = 69/210 (32.86%), Postives = 114/210 (54.29%), Query Frame = 1
Query: 1 NLILTEKTVAVHDLLARSDNGVLRRGAAAKVGEKFGNTGCAMLNLSKRYQQQTAAGIAVPDVSCRRRANN--KRDVIQQKEALQPIPLKLRTTQQSVAAVIGLPKTTFCHRMKDLGVKSHSRFRKPALTNRDKLDQLRWARSFVST-SAGGTRKFNGIRNVVHVDEKWWYLCQEKQSCYMFDGEALPSSKVQHKSHIPKVMFFGVVGRPR 621
NL ++ L+ ++ NG LR+ A +V E F + ++ +R +Q A GI V +VS R++ N+ K++ I + +PL+LR T +S A+ G+PK+T +K+ ++ HS KP L +K +L+W S + + KF +RN+VH+DEKW+ ++ ++ Y+ E P VQ+K+ I KVMF V RPR
Sbjct: 140 NLTNIQRQEIYDALVKKTINGRLRKKATTEVAEMFNIKRGRVQDIWRRAKQCRAQGIPV-NVSSRKKTNSGRKKNEIDLSDVAN-VPLQLRGTLRSFASAAGIPKSTLHRMLKEGLIRRHSNTLKPLLKEENKRSRLQWCISMLDWHTLPNEPKFVDMRNIVHIDEKWFNTTKKTRTFYLVHWEDDPYRPVQNKNSIDKVMFLAAVARPR 347
BLAST of mRNA_H-elongata_contig76002.15282.1 vs. uniprot
Match: A0A6A4ZER9_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZER9_9STRA) HSP 1 Score: 102 bits (253), Expect = 1.130e-22 Identity = 74/214 (34.58%), Postives = 109/214 (50.93%), Query Frame = 1
Query: 1 NLILTEKTVAVHDLLARSDNGVLRRGAAAKVGEKFGNTGCAMLNLSK--RYQQQTAAGIAVPDVSCRRRAN----NKRDVIQQKEALQPIPLKLRTTQQSVAAVIGLPKTTFCHRMKDLG-VKSHSRFRKPALTNRDKLDQLRWARSFVSTSAGGTRKFNGIRNVVHVDEKWWYLCQEKQSCYMFDGEALPSSKVQHKSHIPKVMFFGVVGRPR 621
NL TE+ LL RS G L GA V + + + K R Q + G+A DV+ + N R + K A+Q +P R T +++AA +PKTT MK+ +K+ + KP LT + +L +ARSF+ + GT F+ + +VVHVDEKW+YL + K+ Y++D E + + V+ K I KVMF V RPR
Sbjct: 21 NLKPTERRAVYEQLLERSIGGKLPYGAIQDVARWYYCHSRTIARIWKQGRLSQSLSHGLA--DVATKMTGNCGRKKTRTTEEIKAAVQSVPHYQRQTLRALAANSQIPKTTLIRHMKEQNSLKARFSYVKPMLTAENTRTRLDFARSFLRLLSDGTTVFSIMHDVVHVDEKWFYLTRVKKKFYVYDDEEVAARSVKSKHFITKVMFLAAVARPR 232
BLAST of mRNA_H-elongata_contig76002.15282.1 vs. uniprot
Match: A0A6A4ZHN9_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A6A4ZHN9_9STRA) HSP 1 Score: 100 bits (250), Expect = 2.670e-22 Identity = 70/215 (32.56%), Postives = 108/215 (50.23%), Query Frame = 1
Query: 1 NLILTEKTVAVHDLLARSDNGVLRRGAAAKVGEKFGNTGCAMLNLSKRYQQQTAAGIAVPDVSCRRRAN-------NKRDVIQQKEALQPIPLKLRTTQQSVAAVIGLPKTTFCHRMKDLG-VKSHSRFRKPALTNRDKLDQLRWARSFVSTSAGGTRKFNGIRNVVHVDEKWWYLCQEKQSCYMFDGEALPSSKVQHKSHIPKVMFFGVVGRPR 621
NL E+ V LLA S G+L +GA A V FG + + + R +Q G V V + R N + D+ + A++ +P + R T ++++A + K+T RMK+ + S + KP LT++ K ++ + +SF+ + F + N+VHVDEKW+YL + K+ Y+F E L VQ K I KVMF V RPR
Sbjct: 11 NLTDVERRVVYERLLAASIGGILPQGATADVARDFGCSTRTVARVWVRGKQSLREGSLVAVVDAKMRGNCGPKFKLSDDDI---EVAVKTVPHEDRQTLRTMSAACQVAKSTLHRRMKNNPRFNARSSYVKPLLTDKHKATRVDFVKSFLRPALNSYHVFANMHNIVHVDEKWFYLSKIKRRFYVFHDEELALRAVQSKKFITKVMFMAAVARPR 222
BLAST of mRNA_H-elongata_contig76002.15282.1 vs. uniprot
Match: Q75LI7_ORYSJ (Transposon protein, putative, Mariner sub-class n=5 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=Q75LI7_ORYSJ) HSP 1 Score: 103 bits (257), Expect = 4.000e-22 Identity = 69/210 (32.86%), Postives = 114/210 (54.29%), Query Frame = 1
Query: 1 NLILTEKTVAVHDLLARSDNGVLRRGAAAKVGEKFGNTGCAMLNLSKRYQQQTAAGIAVPDVSCRRRANN--KRDVIQQKEALQPIPLKLRTTQQSVAAVIGLPKTTFCHRMKDLGVKSHSRFRKPALTNRDKLDQLRWARSFVST-SAGGTRKFNGIRNVVHVDEKWWYLCQEKQSCYMFDGEALPSSKVQHKSHIPKVMFFGVVGRPR 621
NL ++ L+ ++ NG LR+ A +V E F + ++ +R +Q A GI V +VS R++ N+ K++ I + +PL+LR T +S A+ G+PK+T +K+ ++ HS KP L +K +L+W S + + KF +RN+VH+DEKW+ ++ ++ Y+ E P VQ+K+ I KVMF V RPR
Sbjct: 140 NLTNIQRQEIYDALVKKTINGRLRKKATTEVAEMFNIKRGRVQDIWRRAKQCRAQGIPV-NVSSRKKTNSGRKKNEIDLSDVAN-VPLQLRGTLRSFASAAGIPKSTLHRMLKEGLIRRHSNTLKPLLKEENKRSRLQWCISMLDWHTLPNEPKFVDMRNIVHIDEKWFNTTKKTRTFYLVHWEDDPYRPVQNKNSIDKVMFLAAVARPR 347
BLAST of mRNA_H-elongata_contig76002.15282.1 vs. uniprot
Match: A2ZU48_ORYSJ (Uncharacterized protein n=1 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=A2ZU48_ORYSJ) HSP 1 Score: 101 bits (252), Expect = 7.300e-22 Identity = 67/210 (31.90%), Postives = 108/210 (51.43%), Query Frame = 1
Query: 1 NLILTEKTVAVHDLLARSDNGVLRRGAAAKVGEKFGNTGCAMLNLSKRYQQQTAAGIAVPDVSCRRRAN--NKRDVIQQKEALQPIPLKLRTTQQSVAAVIGLPKTTFCHRMKDLGVKSHSRFRKPALTNRDKLDQLRWARSFVST-SAGGTRKFNGIRNVVHVDEKWWYLCQEKQSCYMFDGEALPSSKVQHKSHIPKVMFFGVVGRPR 621
NL ++ L +++NG+LR+ A +V F + + +R +Q A GI + DV R++ N K+ I + +PL+ R T +S A+ G+PK+T +K+ ++ HS KP L +K +LRW S + + KF +RN+VH+DEKW+ + ++ YM E P VQ+K+ I KVMF + RPR
Sbjct: 152 NLTKIQRQQIYAALAGKTNNGILRKNATTEVAAMFNVKRARVQAIWRRVKQCRAQGIPI-DVRSRKKKNCGRKKKEINLTDVAN-VPLQQRGTLRSFASASGIPKSTLHKMLKEGLLRRHSNTLKPLLKEENKQSRLRWCLSMLDWHTLPNQPKFIDMRNIVHIDEKWFNTTKRTRTIYMVHWEDDPYRPVQNKNSIDKVMFLAAITRPR 359
BLAST of mRNA_H-elongata_contig76002.15282.1 vs. uniprot
Match: W4FQY3_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FQY3_9STRA) HSP 1 Score: 100 bits (249), Expect = 9.810e-22 Identity = 66/206 (32.04%), Postives = 109/206 (52.91%), Query Frame = 1
Query: 1 NLILTEKTVAVHDLLARSDNGVLRRGAAAKVGEKFGNTGCAMLNLSKRYQQQTAAGIAVPDVSCRRRANNKRDVIQQKE----ALQPIPLKLRTTQQSVAAVIGLPKTTFCHRMKDLG-VKSHSRFRKPALTNRDKLDQLRWARSFVSTSAGGTRKFNGIRNVVHVDEKWWYLCQEKQSCYMFDGEALPSSKVQHKSHIPKVMFFG 603
NL TE+ LL RS G L GA V + ++ + K+ + + + DV+ + + N+ R + E A+Q +P R T +++AA +P TT MK+ G +K+ S + KP LT + +L + +SF+ +GGT F+ + ++VH+DEKW+YL + K+ Y++D E + + V+ KS I KVMF G
Sbjct: 21 NLKPTERRAVFEQLLERSIGGKLPYGAIRDVARVYCCHSRTIVRIWKQGRLSQSRNHGLADVAAKMKGNSGRKKTRTAEEIKAAVQGVPQYHRQTLRALAANCHVPTTTLVRHMKEHGKLKARSSYVKPMLTEENIGTRLAFVKSFLRPLSGGTIGFSNMHDLVHIDEKWFYLTRVKKKFYVYDDEEVAARFVKSKSFITKVMFLG 226
BLAST of mRNA_H-elongata_contig76002.15282.1 vs. uniprot
Match: A0A1R3G0N2_9ROSI (Uncharacterized protein n=1 Tax=Corchorus olitorius TaxID=93759 RepID=A0A1R3G0N2_9ROSI) HSP 1 Score: 97.4 bits (241), Expect = 9.320e-21 Identity = 62/204 (30.39%), Postives = 109/204 (53.43%), Query Frame = 1
Query: 16 EKTVAVHD-LLARSDNGVLRRGAAAKVGEKFGNTGCAMLNLSKRYQQQTAAGIAVPDVSCRRRANNKRDVIQQKEALQPIPLKLRTTQQSVAAVIGLPKTTFCHRMKDLGVKSHSRFRKPALTNRDKLDQLRWARSFVS-TSAGGTRKFNGIRNVVHVDEKWWYLCQEKQSCYMFDGEALPSSKVQHKSHIPKVMFFGVVGRPR 621
EK A+ D LL RS NG L RG + + +F + C + + K+Y+ I DVS R+ + ++ + LQ IPL+ R T ++++ ++T R+K ++ HS KP LT +K+++++++ S + TS F G+ +V+H+DEKW+Y+ + ++ Y+ E P + K+ I K+MF + RPR
Sbjct: 24 EKQKAIRDMLLVRSVNGKLPRGLVSIITTQFSVSRCTIFRIWKQYKS-----IINGDVSSRKIYSGQKRIEIDMSELQKIPLRKRITLKALSC--SFSESTVQRRVKSGSIRKHSNAIKPDLTPENKIERMKFSHSMIDKTSIPHDPIFEGMYDVIHIDEKWFYMTKTLETYYLAPNEENPHRTCKSKNFIQKIMFLVALARPR 220
BLAST of mRNA_H-elongata_contig76002.15282.1 vs. uniprot
Match: A0A418AYL9_9STRA (HTH_Tnp_Tc3_2 domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418AYL9_9STRA) HSP 1 Score: 96.3 bits (238), Expect = 1.150e-20 Identity = 61/205 (29.76%), Postives = 106/205 (51.71%), Query Frame = 1
Query: 16 EKTVAVHDLLARSDNGVLRRGAAAKVGEKFGNTGCAMLNLSKRYQQQTAA-GIAVPDVSCRRRANN--KRDVIQQKEALQPIPLKLRTTQQSVAAVIGLPKTTFCHRMKDLGVKSHSRFRKPALTNRDKLDQLRWARSFVSTSAGGTRKFNGIRNVVHVDEKWWYLCQEKQSCYMFDGEALPSSKVQHKSHIPKVMFFGVVGRPR 621
E+ HDLL + G L +G A + K+G + + + +R Q A+ G+A + + R K + + A++ +P LR T +A+ G+ TT +K ++ + KP LT++ K D++ +ARSF+ + +++ + ++VH+DEKW+Y+ + Y++ EA+P K K HI KVMF V RPR
Sbjct: 14 ERVSLYHDLLEHKEGGRLPQGKAKALLLKYGISRQTLSRVWRRGQDSKASTGVANVALLKQGRCGRPKKWSLDDMEAAVKSVPAHLRMTLAMLASTSGISSTTLWRLLKTKKLRRRTSRIKPMLTDKHKTDRMTFARSFLHETTRQGMRWHDMLDLVHIDEKWFYITMVNRRYYLWHDEAIPVRKCSSKRHIIKVMFLTAVARPR 218 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig76002.15282.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig76002.15282.1 >prot_H-elongata_contig76002.15282.1 ID=prot_H-elongata_contig76002.15282.1|Name=mRNA_H-elongata_contig76002.15282.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=207bp NLILTEKTVAVHDLLARSDNGVLRRGAAAKVGEKFGNTGCAMLNLSKRYQback to top mRNA from alignment at H-elongata_contig76002:111..731- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig76002.15282.1 ID=mRNA_H-elongata_contig76002.15282.1|Name=mRNA_H-elongata_contig76002.15282.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=621bp|location=Sequence derived from alignment at H-elongata_contig76002:111..731- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig76002:111..731- >mRNA_H-elongata_contig76002.15282.1 ID=mRNA_H-elongata_contig76002.15282.1|Name=mRNA_H-elongata_contig76002.15282.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1242bp|location=Sequence derived from alignment at H-elongata_contig76002:111..731- (Himanthalia elongata Himel1 dioecious)back to top |