mRNA_H-elongata_contig75744.15265.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig75744.15265.1 vs. uniprot
Match: D7G5E6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5E6_ECTSI) HSP 1 Score: 204 bits (520), Expect = 3.070e-58 Identity = 103/174 (59.20%), Postives = 134/174 (77.01%), Query Frame = 1
Query: 34 RDEVTQALNILLALKRWIRVQVPTIEDGNNFGVSVQRDVDGAIEKLTESIEKALHKIPGYFQDRAVAWEKTATKILKEAKTSTSTTKETGGKDGDVNKSVSSSSTDETSSQASAAPDSSLHLVAIDVSWFVRLHHMALEARDALIISGDMVEKNIEKLRKPKGSNNRGGTMYSF 555
R+EVTQ ++ILLALKRWIRVQVP IEDGNNFGVSVQ DV I++LT + +L ++PGYF+ RA AW+K K KE+KTS+S +K+TGGKDGD T+E +S++S APDS+ HL+A+DV WFV LHH L ARD+L+++ DM+EKN+EKL +PKG+N +GG MYSF
Sbjct: 71 RNEVTQTMSILLALKRWIRVQVPKIEDGNNFGVSVQLDVAKGIDELTTPVASSLGEMPGYFESRASAWDKIGNKKSKESKTSSSASKDTGGKDGDSXXXXXXXXTEEKTSESSFAPDSANHLIALDVKWFVSLHHTLLRARDSLVLAADMIEKNMEKLLRPKGTNTQGGGMYSF 244
BLAST of mRNA_H-elongata_contig75744.15265.1 vs. uniprot
Match: A0A835YYY9_9STRA (Proteasome activator pa28 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYY9_9STRA) HSP 1 Score: 139 bits (351), Expect = 4.690e-34 Identity = 79/169 (46.75%), Postives = 105/169 (62.13%), Query Frame = 1
Query: 34 RDEVTQALNILLALKRWIRVQVPTIEDGNNFGVSVQRDVDGAIEKLTESIEKALHKIPGYFQDRAVAWEKTATKILKEAKTSTSTTKETGGKDGDVNKSVSSSSTDETSSQASAAPDSSLHLVAIDVSWFVRLHHMALEARDALIISGDMVEKNIEKLRKPKGSNNRGG 540
+ ++ ++NILLAL RWI+V VP IEDGNNFGV VQ++V I + +E A K+P Y + RA AWEK A K AK STS + TGGK+GD NK+ + S D +SS + PD LV +DV +V+LH ARD ++ DMVEKN+ K++ PKG R G
Sbjct: 71 QSDLATSINILLALYRWIQVHVPIIEDGNNFGVGVQQEVAKLIAESVTKLEAAFDKLPEYHEKRAGAWEKLAAKEDSTAKKSTSKSTVTGGKEGDENKTTVTESNDTSSSTSRQIPDGLRALVTMDVRCYVQLHKSIQLARDTVLFCADMVEKNVTKIKAPKGDAGRHG 239
BLAST of mRNA_H-elongata_contig75744.15265.1 vs. uniprot
Match: K3WA13_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WA13_GLOUD) HSP 1 Score: 116 bits (290), Expect = 1.060e-25 Identity = 64/166 (38.55%), Postives = 99/166 (59.64%), Query Frame = 1
Query: 37 DEVTQALNILLALKRWIRVQVPTIEDGNNFGVSVQRDVDGAIEKLTESIEKALHKIPGYFQDRAVAWEKTATKILKEAKTSTSTTKETGGKDGDVNKSVSSSSTDETSSQASAAPDSSLHLVAIDVSWFVRLHHMALEARDALIISGDMVEKNIEKLRKPKGSNNR 534
DE+ Q L +L L +WI++ VP I DGNNFGV VQ+ +++ + +K + Y+ RA A EK KI KE+ ST+ T TGGKDGD NKSV++S ET++ + D ++VA+D+ W+ L RD ++ D++EKN +K+ P+G+++R
Sbjct: 72 DEIEQVLTVLAQLSQWIQLLVPKIADGNNFGVEVQKLAYVHVKESIATWQKQWDALADYYNQRATAVEKVNDKIAKESSKSTTVTATTGGKDGDENKSVTTSLDKETATSGTVVDDWVSYIVAVDLKWYFNLARTLEAIRDQYAVTADIIEKNKDKIVLPRGNSDR 237
BLAST of mRNA_H-elongata_contig75744.15265.1 vs. uniprot
Match: A0A2D4BJC1_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BJC1_PYTIN) HSP 1 Score: 111 bits (277), Expect = 6.200e-24 Identity = 69/184 (37.50%), Postives = 100/184 (54.35%), Query Frame = 1
Query: 1 LFPT-TSMVRPRRDEVTQALNILLALKRWIRVQVPTIEDGNNFGVSVQRDVDGAIEKLTESIEKALHKIPGYFQDRAVAWEKTATKILKEAKTSTSTTKETGGKDGDVNKSVSSSSTDETSSQASAAPDSSLHLVAIDVSWFVRLHHMALEARDALIISGDMVEKNIEKLRKPKGSNNRGGTMY 549
L PT T +V D V QAL AL +WI + +P + DGNNFGV VQ V +++ ++ ++KA +P Y RA EK + KE T+ + T TG K+GD K+V ++ ET++ D ++VAIDV W+ L + RDA I+ D +EKN +K+ KP+G G MY
Sbjct: 61 LQPTLTQLVGVTSDHVEQALRXFQALXQWISLLLPKVADGNNFGVEVQLVVMKELKETSDKLQKAWDALPDYHSQRATVLEKLNEXLSKETSTTNTVTATTGXKEGDEKKTVVATVGKETATAQPVVEDWIANVVAIDVKWYFHLARVLELVRDAYAIAFDRIEKNKDKILKPRGQERSGYGMY 244
BLAST of mRNA_H-elongata_contig75744.15265.1 vs. uniprot
Match: A0A8K1CBJ1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CBJ1_PYTOL) HSP 1 Score: 110 bits (274), Expect = 1.530e-23 Identity = 70/166 (42.17%), Postives = 91/166 (54.82%), Query Frame = 1
Query: 52 ALNILLALKRWIRVQVPTIEDGNNFGVSVQRDVDGAIEKLTESIEKALHKIPGYFQDRAVAWEKTATKILKEAKTSTSTTKETGGKDGDVNKSVSSSSTDETSSQASAAPDSSLHLVAIDVSWFVRLHHMALEARDALIISGDMVEKNIEKLRKPKGSNNRGGTMY 549
AL+ L +WI + VP + DGNNFGV VQ V I+ T+ ++KA +P Y RA A EK K KE +T+ T+ TGGK+GD KSV SS E+S+ A+ D +VAIDV WF L RDA I D VEKN +K+ +P+ G MY
Sbjct: 78 ALSDFQKLSQWISLLVPKVADGNNFGVEVQLIVLKEIKDATDKLQKAWDSLPDYHSQRATAIEKLNDKRSKEKTVTTTVTESTGGKEGDEKKSVVSSVDKESSTSAAPVDDWIAQVVAIDVKWFYNLARTLEIVRDAYAIVYDRVEKNKDKILRPRNQERAGYGMY 243
BLAST of mRNA_H-elongata_contig75744.15265.1 vs. uniprot
Match: A0A662Y6D6_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y6D6_9STRA) HSP 1 Score: 103 bits (257), Expect = 2.920e-21 Identity = 64/180 (35.56%), Postives = 96/180 (53.33%), Query Frame = 1
Query: 1 LFPTTSMVRPRRDEVTQALNILLALKRWIRVQVPTIEDGNNFGVSVQRDVDGAIEKLTESIEKALHKIPGYFQDRAVAWEKTATKILKEAKTSTSTTKETGGKDGDVNKSVSSSSTDETSSQASAAPDSSLHLVAIDVSWFVRLHHMALEARDALIISGDMVEKNIEKLRKPKGSNNRGG 540
L TTS D+V ++ L L+ WI++QVP +EDGNNFGV VQ+ +++ E +KA + Y RA A EK K+ E+ TGGKDGD KSV++ + S+ A A D+ +V +DV W+ L RD ++ D++ KN +K+ P+G+N+R G
Sbjct: 66 LLATTS------DQVALVMDALQLLQLWIQLQVPKVEDGNNFGVEVQKYAFTQLKEALEKWQKAWDALADYSSSRATAAEKLNAKLSSESXXXXXXXXXTGGKDGDEQKSVTAKVDKQGSTGAQAGEDALAAVVELDVKWYFNLVRALEGVRDQYAVTADVIAKNKDKISLPRGNNDRAG 239
BLAST of mRNA_H-elongata_contig75744.15265.1 vs. uniprot
Match: D0MSD0_PHYIT (Uncharacterized protein n=11 Tax=Phytophthora TaxID=4783 RepID=D0MSD0_PHYIT) HSP 1 Score: 99.0 bits (245), Expect = 1.160e-19 Identity = 59/168 (35.12%), Postives = 88/168 (52.38%), Query Frame = 1
Query: 37 DEVTQALNILLALKRWIRVQVPTIEDGNNFGVSVQRDVDGAIEKLTESIEKALHKIPGYFQDRAVAWEKTATKILKEAKTSTSTTKETGGKDGDVNKSVSSSSTDETSSQASAAPDSSLHLVAIDVSWFVRLHHMALEARDALIISGDMVEKNIEKLRKPKGSNNRGG 540
DEV Q ++ + L+ WI+VQVP +EDGNNFGV VQ+ +++ E +K + Y RA A EK K E GGKDGD KSV++ ++++ A D+ +V ID+ W+ L RD ++ D++ KN EK+ P+G N+R G
Sbjct: 72 DEVAQLISTIQQLQVWIQVQVPKVEDGNNFGVEVQKYAFVHLKEALERWQKTWDSMADYSSARATAVEKLNAKASSETSXXXXXXSSKGGKDGDEEKSVTAKVEKQSNAGTKAPEDAIAAVVEIDIKWYFNLARALEGVRDQYAVTEDVIFKNKEKIELPRGKNDRAG 239
BLAST of mRNA_H-elongata_contig75744.15265.1 vs. uniprot
Match: A0A484E4B7_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E4B7_BRELC) HSP 1 Score: 99.0 bits (245), Expect = 1.160e-19 Identity = 61/168 (36.31%), Postives = 88/168 (52.38%), Query Frame = 1
Query: 37 DEVTQALNILLALKRWIRVQVPTIEDGNNFGVSVQRDVDGAIEKLTESIEKALHKIPGYFQDRAVAWEKTATKILKEAKTSTSTTKETGGKDGDVNKSVSSSSTDETSSQASAAPDSSLHLVAIDVSWFVRLHHMALEARDALIISGDMVEKNIEKLRKPKGSNNRGG 540
DEV Q L+ L+ WI++QVP +EDGNNFGV VQ+ +++ +K + Y RA A EK TK E+ T GGKDGD KSV+++ E + AA D+ +V +DV W+ L RD ++ D++ KN K+ P+G N+R G
Sbjct: 72 DEVLQLLHTTQQLQLWIQLQVPKVEDGNNFGVEVQKYAFMHLKEAQVMWQKTWDSLAEYSAARATAVEKCHTKATSESSTXXXXXXSKGGKDGDEEKSVTATVEKECKAGTKAAEDAIAAVVELDVKWYFNLLRALEGVRDQYAVTEDVIVKNQSKIELPRGKNDRAG 239
BLAST of mRNA_H-elongata_contig75744.15265.1 vs. uniprot
Match: A0A225WBW4_9STRA (Proteasome activator subunit 1 n=3 Tax=Phytophthora TaxID=4783 RepID=A0A225WBW4_9STRA) HSP 1 Score: 97.4 bits (241), Expect = 3.960e-19 Identity = 57/168 (33.93%), Postives = 87/168 (51.79%), Query Frame = 1
Query: 37 DEVTQALNILLALKRWIRVQVPTIEDGNNFGVSVQRDVDGAIEKLTESIEKALHKIPGYFQDRAVAWEKTATKILKEAKTSTSTTKETGGKDGDVNKSVSSSSTDETSSQASAAPDSSLHLVAIDVSWFVRLHHMALEARDALIISGDMVEKNIEKLRKPKGSNNRGG 540
DEV Q ++ L L+ WI++QVP +EDGNNFGV VQ+ +++ E +K + Y RA EK K E GGKDGD KSV++ ++++ A D+ +V +D+ W+ L RD ++ D++ KN EK+ P+G N+R G
Sbjct: 72 DEVAQLMSALQLLQLWIQLQVPKVEDGNNFGVEVQKYAYVHLKEALEKWQKTWDSVADYSSARATTVEKLNAKASSETSXXXXXXXSKGGKDGDEEKSVTAKVEKQSNTGNQAPEDAVAAVVELDIKWYFNLARALEGVRDQYAVTEDIITKNKEKIELPRGKNDRAG 239
BLAST of mRNA_H-elongata_contig75744.15265.1 vs. uniprot
Match: A0A6A3F8F5_9STRA (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3F8F5_9STRA) HSP 1 Score: 95.5 bits (236), Expect = 1.830e-18 Identity = 56/168 (33.33%), Postives = 89/168 (52.98%), Query Frame = 1
Query: 37 DEVTQALNILLALKRWIRVQVPTIEDGNNFGVSVQRDVDGAIEKLTESIEKALHKIPGYFQDRAVAWEKTATKILKEAKTSTSTTKETGGKDGDVNKSVSSSSTDETSSQASAAPDSSLHLVAIDVSWFVRLHHMALEARDALIISGDMVEKNIEKLRKPKGSNNRGG 540
DEV Q L+++ L+ WI++QVP +EDGNNFGV VQ+ +++ + +K + Y RA A EK K E DGD KSV++ ++++ ++AA D+ +V +DV W+ L RD ++ D++ KN EK+ P+G N+R G
Sbjct: 72 DEVAQLLSVIAQLQLWIQLQVPKVEDGNNFGVEVQKYAFVQLKEALDKWQKTWDSLADYSSARASAVEKLNAKASSETXXXXXXXXXXXXXDGDEEKSVTAKVDKQSNNGSNAAEDAVAAVVELDVKWYFNLVRALEGVRDQYAVTSDLISKNKEKIELPRGKNDRAG 239 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig75744.15265.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig75744.15265.1 >prot_H-elongata_contig75744.15265.1 ID=prot_H-elongata_contig75744.15265.1|Name=mRNA_H-elongata_contig75744.15265.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=180bp MVRPRRDEVTQALNILLALKRWIRVQVPTIEDGNNFGVSVQRDVDGAIEKback to top mRNA from alignment at H-elongata_contig75744:315..2636+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig75744.15265.1 ID=mRNA_H-elongata_contig75744.15265.1|Name=mRNA_H-elongata_contig75744.15265.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2322bp|location=Sequence derived from alignment at H-elongata_contig75744:315..2636+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig75744:315..2636+ >mRNA_H-elongata_contig75744.15265.1 ID=mRNA_H-elongata_contig75744.15265.1|Name=mRNA_H-elongata_contig75744.15265.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1080bp|location=Sequence derived from alignment at H-elongata_contig75744:315..2636+ (Himanthalia elongata Himel1 dioecious)back to top |