mRNA_H-elongata_contig75688.15260.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig75688.15260.1
Unique NamemRNA_H-elongata_contig75688.15260.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig75688.15260.1 vs. uniprot
Match: D7G3R1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3R1_ECTSI)

HSP 1 Score: 582 bits (1500), Expect = 3.600e-198
Identity = 295/467 (63.17%), Postives = 341/467 (73.02%), Query Frame = 1
Query:    1 NGLIIGLNKYSHDSAVCVLDWKGGSCLFAGEKERLTRRKHDGGDTADLVSHALSSIGSSLEDVRLVVSNNHHYRVAPFERRIPWSVAMGTTPESYATAENLIPGATHTELSHHLAHAWSTAAIAPFESGLIVVMDGMGEAHGAMSNAETAVVGLEGERLGTRHQAVEH---------DRDQEVEYYNDLRLMRELGADEYMAAGADAPGECNPHFQQVPAELVPQKAYREAESAYTFVAGVDGGPPTITPIYKRWTLERSPPELYNHGFENMESLGAVYSRVSSHIFGDWNACGKVMGLAPWAAK-------WPMTDAPLPPPRLVSGSLLSDGTDGNGFCVNWEAIERLPRPNELGDKS------------------LRPFYAALAAEAQTGLEDAAMGFIAGLKERTGEKNMCLCGGVALNSVLNGKIAREAGFERVFVPPYPGDEGIAVGCAAFGWHQRKLLLP 1299
            +GL++GLNKYSHDS+VC+L ++ G+CLFAGEKERLTR KHDGGDT +LVSHAL S+G+SLEDVRLVVSNNHH+RVAPFE R+PW+VA GT P SYA+ ENLIPGA H ELSHHLAHAWS AA++PF+SGLIVVMDGMGE+HGAM+ AE                             +R   VEYYNDLRLMRELGA   MA G + PG+ +P FQQVP EL+P +AYREAESAY F+ G DGGP T+ PIYKRW  ERSPPEL+NHGFENMES+GAVYSRVSSHIFGDWNACGKVMGLAP+A+K                             T  + F V+WEAIE LPRPN LG +                   L  FYAALA+ AQ GLE+AA+ F+ GL++RTGE+N+CLCGGVALNSVLNGKIAREAGF RVFVPP PGDEG+AVGCA+FGWHQR+LLLP
Sbjct:   52 DGLVVGLNKYSHDSSVCILSYRDGTCLFAGEKERLTRAKHDGGDTGELVSHALRSVGASLEDVRLVVSNNHHHRVAPFEERVPWAVAQGTYPASYASEENLIPGAAHAELSHHLAHAWSAAALSPFDSGLIVVMDGMGESHGAMARAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXGERPPPVEYYNDLRLMRELGAGGEMAEGTEVPGDGSPGFQQVPEELLPHEAYREAESAYQFMPGADGGP-TLVPIYKRWIRERSPPELFNHGFENMESMGAVYSRVSSHIFGDWNACGKVMGLAPYASKSSPPXXXXXXXXXXXXXXXXXXXXXXXXXTGEDAFYVDWEAIESLPRPNGLGQEGDGQDEGDDGSGNEDGLHGLGSFYAALASRAQEGLEEAALEFVKGLRDRTGEENVCLCGGVALNSVLNGKIAREAGFRRVFVPPCPGDEGVAVGCASFGWHQRRLLLP 517          
BLAST of mRNA_H-elongata_contig75688.15260.1 vs. uniprot
Match: A0A0G4FRZ2_VITBC (Uncharacterized protein n=3 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4FRZ2_VITBC)

HSP 1 Score: 407 bits (1047), Expect = 7.360e-131
Identity = 219/435 (50.34%), Postives = 275/435 (63.22%), Query Frame = 1
Query:    7 LIIGLNKYSHDSAVCVLDWKGGSCLFAGEKERLTRRKHDGGDTADLVSHALSSIGSSLEDVRLVVSNNHHYRVAPFERRIPWSVAMGTTPESYATAENLIPGATHTELSHHLAHAWSTAAIAPFESGLIVVMDGMGEAHGAMSNAETAVVGLEGERLGTRHQAVEHDRDQEVEYYNDLRLMRELGADEYMAAGADAPGECNPHFQQVPAELVPQKAYREAESAYTFVAGVDGGPPTITPIYKRWTLERSPPELYNHGFENMESLGAVYSRVSSHIFGDWNACGKVMGLAPWAAK---------WP-MTDAPLPPPRLVSGSLLSDGTDGNGFCVNWEAIERLPRPNELGDKSLRPFYAALAAEAQTGLEDAAMGFIAGLKERTGEKNMCLCGGVALNSVLNGKIAREAGFERVFVPPYPGDEGIAVGCAAFGWHQ 1281
            LI+GLNKYSHD+A C++D  G   L+ GEKERL+R KHDGG+  DLV  AL+S+ ++L+DV +VV +NHH+R+APFE R+PW+V+ G  P SY    N+  G    E+SHHLAHAWS    APF+ GL+VVMDGMGE++  M+++ +                       + EY  DL L+    +++  A            F Q P +L+  K YREAESAY F      G PT+ P++KRWT ERSPPEL+NHGFENMES+GAVYSRVSS IFGDWN CGKVMGLAPWA           W  + D      RL+ G+LL    +  GF VNW+ +E LP  + LG       +A LA   Q  LE+AAM  I  LKERTG +N+CL GGVALNSVLNG+I RE GF+RVF+PP+PGDEGIA GCA  G H 
Sbjct:   95 LILGLNKYSHDAACCIVDTSGAH-LYGGEKERLSRVKHDGGEVDDLVDQALTSVDATLDDVAMVVQSNHHFRIAPFEDRLPWAVSQGHYPPSYIDPLNIFAGIPKREVSHHLAHAWSVITQAPFDEGLVVVMDGMGESYRYMADSHS-----------------------QAEYLTDLDLLDSATSEQRSA------------FIQNPRQLLAGKGYREAESAYLFSRSSAAGGPTVMPLFKRWTEERSPPELFNHGFENMESMGAVYSRVSSQIFGDWNVCGKVMGLAPWAKAGSTGEATDMWKGLLDDGF---RLMEGNLLLSKEEQGGFRVNWDLLESLPH-DCLGTDPTFMSFAPLAWRVQRDLENAAMTLIQELKERTGARNLCLVGGVALNSVLNGRICRELGFDRVFIPPFPGDEGIAFGCAMAGLHH 489          
BLAST of mRNA_H-elongata_contig75688.15260.1 vs. uniprot
Match: A0A3M2ADF0_9BACT (PqqD family peptide modification chaperone n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3M2ADF0_9BACT)

HSP 1 Score: 387 bits (994), Expect = 3.970e-125
Identity = 212/428 (49.53%), Postives = 269/428 (62.85%), Query Frame = 1
Query:    4 GLIIGLNKYSHDSAVCVLDWKGGSCLFAGEKERLTRRKHDGGDTADLVSHALSSIGSSLEDVRLVVSNNHHYRVAPFERRIPWSVAMGTTPESYATAENLIPGATHTELSHHLAHAWSTAAIAPFESGLIVVMDGMGEAHGAMSNAETAVVGLEGERLGTRHQAVEHDRDQEVEYYNDLRLMRELGADEYMAAGADAPGECNPHFQQVPAELVPQKAYREAESAYTFVAGVDGGPPTITPIYKRWTLERSPPELYNHGFENMESLGAVYSRVSSHIFGDWNACGKVMGLAPWAAKWPMTDAPLPPPRLVSGSLLSDGTDGNGFCVNWEAIERLPRPNELGDKSLRPFYAALAAEAQTGLEDAAMGFIAGLKERTGEKNMCLCGGVALNSVLNGKIAREAGFERVFVPPYPGDEGIAVGCAAFGWHQRK 1287
            G ++GLN+Y+H +A C+LD  GG  LFAG KERL+RRKHDGGDTADLV HAL   G    ++  VV+NNH +R+  FERR+PWSVA+G    S+   ENL+PG    ELSHHLAHAWS   +APF  GLI+VMDG+G     +             R G R             Y++D  L R         AG          F+QVPAE    + +REAE+ Y F  G++     +  ++KRWT ER+P  L+N+GFENMESLGAVYSRV+SH+FG WN CGKVMGLAPWA +W     P P   L+ G L           ++W  +E  P PNE  D++ RP YA LAA+ Q GLE+  + F+  L+ERTGE+N+CL GGVALNS LNG+IARE GF+RVFVPP+PGD+GIAVGCA +G H+ +
Sbjct:    4 GPVLGLNQYTHSAAACLLD-TGGRPLFAGAKERLSRRKHDGGDTADLVGHALERCGLEPAELAAVVANNHLFRIDDFERRLPWSVALGHYRPSFLRPENLLPGIEKWELSHHLAHAWSVLPLAPFARGLILVMDGIGSTWRELH------------RPGER-------------YHSDAGLPR---------AG---------DFRQVPAEPERCEGWREAETVYRF-DGLE-----LELVFKRWTRERTPVLLHNYGFENMESLGAVYSRVASHVFGHWNDCGKVMGLAPWAERWDPDGRPRP---LLRGPL-------EELAIDWSRLESEPHPNEWEDEARRPAYARLAADLQLGLEEVVLDFLRRLRERTGERNLCLAGGVALNSTLNGRIARECGFDRVFVPPWPGDDGIAVGCALWGRHRLR 371          
BLAST of mRNA_H-elongata_contig75688.15260.1 vs. uniprot
Match: A0A0M0JZH7_9EUKA (Carbamoyltransferase n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JZH7_9EUKA)

HSP 1 Score: 375 bits (963), Expect = 3.450e-117
Identity = 217/456 (47.59%), Postives = 265/456 (58.11%), Query Frame = 1
Query:   10 IIGLNKYSHDSAVCVLDWKGGSCLFAGEKERLTRRKHDGGDTADLVSHALSSIGSSLEDVRLVVSNNHHYRVAPFERRIPWSVAMGTTPESYATAENLIPGATHTELSHHLAHAWSTAAIAPFESGLIVVMDGMGEAHGAMSNAETAVVGLEGERLGTRHQAVEHDRDQEVEYYNDLRLMRELGADEYMAAGADAPGECNPHFQQVPAELVPQKAYREAESAYTFVAGVDGGPPTITPIYKRWTLERSPPELYNHGFENMESLGAVYSRVSSHIFGDWNACGKVMGLAPWAAKWPMTDAPLPPPRLVSGSLLS---DGTDGNGFCVNWEAIE---RLPRPN-------ELGDK-------------SLRPFYAALAAEAQTGLEDAAMGFIAGLKERTGEKNMCLCGGVALNSVLNGKIAREAGFERVFVPPYPGDEGIAVGCAAFGWHQRKLLLP 1299
            ++GLNKYSHD+  C++   G   +     ERL+R KHDGGDTA    HAL ++GSS+EDV  V +NNHH+RVA FE R+PWSV MG    S  + +NL+PG  H ELSHHLAH W     APFE GL+VVMDGMGE   AM  A                      RD +  Y +DLRL    G   Y+A              Q  + L     +REAESAY F          ++ ++KRW  +RSP ELYNHGFEN+ES+GA+YSRVSSHIFGDWNACGKVMGLAPWA  W          RL+S  LL    DG DG    + W+A+E   +LP  N        LG K             S+R  YAALAA  Q  LE+  + ++  L+++TGE N+CL GGV  NSVLNG++AREAGFE VF+PPYPGDEGIA GCAA+  H    LLP
Sbjct:   21 VLGLNKYSHDAGACLISTCGQHSIIV-PNERLSRLKHDGGDTAAATRHALEAVGSSIEDVVAVCANNHHHRVASFEGRLPWSVPMGLYATSALSDDNLLPGVPHFELSHHLAHVWCAITQAPFERGLVVVMDGMGETFAAMQAA----------------------RD-DTHYMHDLRLPEATG---YVAV------------PQGSSTLGAPPGHREAESAYLFEGSA------LSRVFKRWVPQRSPSELYNHGFENLESVGALYSRVSSHIFGDWNACGKVMGLAPWAGTWADVQRDPVHARLLSTPLLRGKLDGEDGEALHLEWDALEAFDQLPPINGFRALQKALGPKILAERSELPAAQASMRGAYAALAARVQMDLEEVTLEWLCRLQQQTGETNLCLVGGVVQNSVLNGRVAREAGFEHVFIPPYPGDEGIAAGCAAYALHA---LLP 428          
BLAST of mRNA_H-elongata_contig75688.15260.1 vs. uniprot
Match: A0A7S3AC86_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3AC86_9RHOD)

HSP 1 Score: 359 bits (922), Expect = 7.740e-116
Identity = 200/425 (47.06%), Postives = 262/425 (61.65%), Query Frame = 1
Query:    7 LIIGLNKYSHDSAVCVLDWKGGSCLFAGEKERLTRRKHDGGDTADLVSHALSSIGSSLEDVRLVVSNNHHYRVAPFERRIPWSVAMGTTPESYATAENLIPGATHT-ELSHHLAHAWSTAAIAPFESGLIVVMDGMGEAHGAMSNAETAVVGLEGERLGTRHQAVEHDRDQEVEYYNDLRLMRELGADEYMAAGADAPGECNPHFQQVPAELVPQKAYREAESAYTFVAGVDGGPPTITPIYKRWTLERSPPELYNHGFENMESLGAVYSRVSSHIFGDWNACGKVMGLAPWA-AKWPMTDAPLPPPR-LVSGSLLSDGTDGNGFCVNWEAIERLPRPNELGDKSLRPFYAALAAEAQTGLEDAAMGFIAGLKERTGEKNMCLCGGVALNSVLNGKIAREAGFERVFVPPYPGDEGIAVGCAAFG 1272
            +++GLN+YSHD++V V D   G  LFA  KER+TRRKHD G+T +LV+HAL S+G   EDV+LVV+NNHH+RV PFE+R+P++V +G  P S    ++ I G     E+SHHLAHAWS   + PF+ GLIVVMDGMGE                       H      R +  EY  D +L +    D++M               + PAE  P   YREAES Y F          ++ +YKRWT E SPPELYNHGFENMESLGA+YSRVSSHIFGDWN CGKVMGLAP+A  +    D+     R L +G L++         +++EA+++L   N+  ++  R FY  LA + Q  +ED  + F+  L+ RTG KN+C  GGVALNS +NG I REAGFE+V++PPYPGD+GI+VGCA +G
Sbjct:   63 IVLGLNEYSHDASVAVADASTGRLLFAASKERITRRKHDAGETGELVAHALESLGLEAEDVKLVVTNNHHFRVLPFEKRLPFAVGIGAYPPS--VLQDPIRGKVEKMEISHHLAHAWSVLPLCPFDEGLIVVMDGMGE-----------------------HIREFTSRKRTGEYVCDYQLPK---LDDFM---------------EFPAEKEPFVGYREAESVYLF------DKMNLSRVYKRWTAENSPPELYNHGFENMESLGALYSRVSSHIFGDWNTCGKVMGLAPYADGEIADLDSSFDENRELFTGQLIT-----GDIQIDFEALDQLSAVNDWSNEENRGFYIHLAHKVQQEVEDEVLSFLKELRVRTGAKNLCFAGGVALNSTINGAIIREAGFEKVYIPPYPGDDGISVGCAMYG 433          
BLAST of mRNA_H-elongata_contig75688.15260.1 vs. uniprot
Match: W7TRB5_9STRA (Carbamoyltransferase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TRB5_9STRA)

HSP 1 Score: 366 bits (940), Expect = 1.100e-115
Identity = 209/429 (48.72%), Postives = 264/429 (61.54%), Query Frame = 1
Query:    7 LIIGLNKYSHDSAVCVLDWKGGSCLFAGEKERLTRRKHDGGDTADLVSHALSSIGSSLEDVRLVVSNNHHYRVAPFERRIPWSVAMGTTPESY----ATAENLIPGATHTELSHHLAHAWSTAAIAPFESGLIVVMDGMGEAHGAMSNAETAVVGLEGERLGTRHQAVEHDRDQEVEYYNDLRLMRELGADEYMAAGADAPGECNPHFQQVPAELVPQKAYREAESAYTFVAGVDGGPPTITPIYKRWTLERSPPELYNHGFENMESLGAVYSRVSSHIFGDWNACGKVMGLAPWAAKWPMTDAPLPPPRLVSGSLLSDGTDGNGFCVNWEAIERLPRPNELG--DKSLRPFYAALAAEAQTGLEDAAMGFIAGLKERTGEKNMCLCGGVALNSVLNGKIAREAGFERVFVPPYPGDEGIAVGCAAFGW 1275
            LI+G+NKYSHD +  ++  K G  LF  EKER+ RRKH  GD ADLV  AL+SI   ++DV++V+  NHH+RVA FE R+PW+ A+   P SY    +T  +L P   H ELSHHLAHAWS    APFE GLIVVMDGMGE   +M+      +GL               RD++  Y +DL L R                     F QVPA+L P   YREAESAY F    DG    +T ++KR+T+E SP ELYNHGFENMES+GAVYSR+SSHIFGDWNACGKVMGL+ +       D     PR + G+L S+      F ++W+A+  LP+ NE    D+     YA +A   Q  LE+ AM +I  LK+ TG  N+C+CGGV  NSVLNG+I RE GFE VF+PPYPGDEGI++GCA +G+
Sbjct:   73 LILGINKYSHDVSCAIVSAKTGDLLFMTEKERVVRRKHAAGDCADLVEFALASIQHEIDDVKMVIQQNHHWRVAHFEERLPWACALEHYPPSYMEEASTFASLNPSCRH-ELSHHLAHAWSVFPQAPFERGLIVVMDGMGEQQKSMA------LGL---------------RDEDFGYTSDLYLPRHA------------------KFMQVPAKLDPLLDYREAESAYYF----DGD--NLTLVFKRYTMEASPSELYNHGFENMESIGAVYSRISSHIFGDWNACGKVMGLSSFGN----ADEAARLPRFMEGNLASET-----FRIDWKALHSLPQANEWHEEDEKKTKCYAHIARRVQEDLENVAMSWIRYLKQATGAANLCICGGVGQNSVLNGRIIRELGFEDVFIPPYPGDEGISIGCALWGF 446          
BLAST of mRNA_H-elongata_contig75688.15260.1 vs. uniprot
Match: A0A2A4PGL3_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2A4PGL3_9BACT)

HSP 1 Score: 359 bits (921), Expect = 2.280e-114
Identity = 199/425 (46.82%), Postives = 257/425 (60.47%), Query Frame = 1
Query:    4 GLIIGLNKYSHDSAVCVLDWKGGSCLFAGEKERLTRRKHDGGDTADLVSHALSSIGSSLEDVRLVVSNNHHYRVAPFERRIPWSVAMGTTPESYATAENLIPGATHTELSHHLAHAWSTAAIAPFESGLIVVMDGMGEAHGAMSNAETAVVGLEGERLGTRHQAVEHDRDQEVEYYNDLRLMRELGADEYMAAGADAPGECNPHFQQVPAELVPQKAYREAESAYTFVAGVDGGPPTITPIYKRWTLERSPPELYNHGFENMESLGAVYSRVSSHIFGDWNACGKVMGLAPWAAKWPMTDAPLPPPRLVSGSLLSDGTDGNGFCVNWEAIERLPRPNELGDKSLRPFYAALAAEAQTGLEDAAMGFIAGLKERTGEKNMCLCGGVALNSVLNGKIAREAGFERVFVPPYPGDEGIAVGCAAFGWH 1278
            GL IGLN+Y+H ++ C+LD +G   LFA  KER+TR+K DGGDTA+LV H L    +S+ D+RLVV+NNH +R+  FE  + W+ A+     SY    NL+PG    ELSHHLAHAWS   I  F+ GLIVVMDG+G    A+                  H+  E+       Y++D  L     + EY A    A    N             K +RE ESA+ F  G++     +  ++KRW  E +P  LYN+GFENMESLGAVYSRVSSHIFGDWNACGKVMG+APWA +W    AP     ++ G L           VNWE +   P+  + G++  RP  AALAA+ Q  LE  A+ F+ GL+E++GEKN+CL GGVALN  +NG+IAREAGFE VF+PP+PGDEG+A+GCA FG H
Sbjct:    4 GLTIGLNQYTHSASACLLDGEGEP-LFALSKERITRKKFDGGDTAELVRHLLEQCNASISDLRLVVANNHLFRIDEFESTLDWAQALDQYRPSYLDRNNLLPGIEKLELSHHLAHAWSVLPICQFDRGLIVVMDGIGTTFEAL------------------HRPGEN-------YFSDAGLA----SAEYYAESPPAEHRNN------------GKGWREGESAFQF-EGLE-----LERVFKRWICEHTPTLLYNYGFENMESLGAVYSRVSSHIFGDWNACGKVMGMAPWAPQWAAQQAP---DWVMRGPLAE-------LEVNWERLRSAPQAXQWGEEDARPMQAALAADVQRDLEQIALDFLRGLREQSGEKNICLVGGVALNCAMNGRIAREAGFENVFIPPWPGDEGLAIGCALFGHH 370          
BLAST of mRNA_H-elongata_contig75688.15260.1 vs. uniprot
Match: A0A7S3AA34_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3AA34_9RHOD)

HSP 1 Score: 359 bits (922), Expect = 1.880e-113
Identity = 200/425 (47.06%), Postives = 262/425 (61.65%), Query Frame = 1
Query:    7 LIIGLNKYSHDSAVCVLDWKGGSCLFAGEKERLTRRKHDGGDTADLVSHALSSIGSSLEDVRLVVSNNHHYRVAPFERRIPWSVAMGTTPESYATAENLIPGATHT-ELSHHLAHAWSTAAIAPFESGLIVVMDGMGEAHGAMSNAETAVVGLEGERLGTRHQAVEHDRDQEVEYYNDLRLMRELGADEYMAAGADAPGECNPHFQQVPAELVPQKAYREAESAYTFVAGVDGGPPTITPIYKRWTLERSPPELYNHGFENMESLGAVYSRVSSHIFGDWNACGKVMGLAPWA-AKWPMTDAPLPPPR-LVSGSLLSDGTDGNGFCVNWEAIERLPRPNELGDKSLRPFYAALAAEAQTGLEDAAMGFIAGLKERTGEKNMCLCGGVALNSVLNGKIAREAGFERVFVPPYPGDEGIAVGCAAFG 1272
            +++GLN+YSHD++V V D   G  LFA  KER+TRRKHD G+T +LV+HAL S+G   EDV+LVV+NNHH+RV PFE+R+P++V +G  P S    ++ I G     E+SHHLAHAWS   + PF+ GLIVVMDGMGE                       H      R +  EY  D +L +    D++M               + PAE  P   YREAES Y F          ++ +YKRWT E SPPELYNHGFENMESLGA+YSRVSSHIFGDWN CGKVMGLAP+A  +    D+     R L +G L++         +++EA+++L   N+  ++  R FY  LA + Q  +ED  + F+  L+ RTG KN+C  GGVALNS +NG I REAGFE+V++PPYPGD+GI+VGCA +G
Sbjct:   63 IVLGLNEYSHDASVAVADASTGRLLFAASKERITRRKHDAGETGELVAHALESLGLEAEDVKLVVTNNHHFRVLPFEKRLPFAVGIGAYPPS--VLQDPIRGKVEKMEISHHLAHAWSVLPLCPFDEGLIVVMDGMGE-----------------------HIREFTSRKRTGEYVCDYQLPK---LDDFM---------------EFPAEKEPFVGYREAESVYLF------DKMNLSRVYKRWTAENSPPELYNHGFENMESLGALYSRVSSHIFGDWNTCGKVMGLAPYADGEIADLDSSFDENRELFTGQLIT-----GDIQIDFEALDQLSAVNDWSNEENRGFYIHLAHKVQQEVEDEVLSFLKELRVRTGAKNLCFAGGVALNSTINGAIIREAGFEKVYIPPYPGDDGISVGCAMYG 433          
BLAST of mRNA_H-elongata_contig75688.15260.1 vs. uniprot
Match: A0A7R9U4N9_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U4N9_9STRA)

HSP 1 Score: 356 bits (913), Expect = 1.990e-112
Identity = 203/439 (46.24%), Postives = 264/439 (60.14%), Query Frame = 1
Query:    7 LIIGLNKYSHDSAVCVLDWKGGSCLFAGEKERLTRRKHDGGDTADLVSHALSSIGSSLEDVRLVVSNNHHYRVAPFERRIPWSVAMGTTPESYATAENLIP-------GATHTELSHHLAHAWSTAAIAPFESGLIVVMDGMGEAHGAMSNAETAVVGLEGERLGTRHQAVEHDRDQEVEYYNDLRLMRELGADEYMAAGADAPGECNPHFQQVPAELVPQKAYREAESAYTFVAGVDGGPPTITPIYKRWTLERSPPELYNHGFENMESLGAVYSRVSSHIFGDWNACGKVMGLAPWAAKWPMTDA--PLPPPRLVSGSLLSDGTDGNGFCVNWEAIERLPRPNEL------GDKSLRPFYAALAAEAQTGLEDAAMGFIAGLKER--TGEKNMCLCGGVALNSVLNGKIAREAGFERVFVPPYPGDEGIAVGCAAFG 1272
            L++GLNKYSHD++VCV+D    + L+AG KERL+RRKHDGG   + V  ALSSIG+ +EDV LVV NNHH+R+APFERR+PW+V  G     Y +A+ L P            ELSHHLAHAWS AA+ PF+ GL++VMDGMG++     N +T                    RD+ V++  D  L +           ADA       F+QVP    P + YREAE+ Y F      GP  +  ++KRWT E+SP ELYN+GFENMES+GA+YSRVSS  FGDWNACGKVMGL PWA  W    +         +SGSLL +G     F V+W+ + +L   N+       GD   + FYA +A   Q  LE   M  +  LK     GE N+C  GGVALNSVLNG+I +E+ F+RV++PP+PGD+G++VGCA +G
Sbjct:   13 LVLGLNKYSHDASVCVVDSDSDAVLYAGAKERLSRRKHDGGGVGEAVDVALSSIGAKIEDVALVVQNNHHHRIAPFERRLPWAVKQG-----YESADGLHPLNLLEHGHLEKLELSHHLAHAWSAAALCPFDHGLVLVMDGMGDSQ---RNFKT--------------------RDERVDFMTDDALPK-----------ADA-------FKQVPDTFAPFRDYREAETVYRF-DDRGPGPMRLELLFKRWTEEKSPSELYNYGFENMESIGAIYSRVSSQTFGDWNACGKVMGLGPWAPTWRKHSSRDERSARSFMSGSLL-EGL----FKVHWDELNKLEYSNDFKAALREGDDLRKLFYAEVAEAVQDDLEGVCMAAVRDLKNTHGPGEANLCFAGGVALNSVLNGRIQKESQFQRVYIPPFPGDDGVSVGCALYG 399          
BLAST of mRNA_H-elongata_contig75688.15260.1 vs. uniprot
Match: A0A0G4FTF1_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4FTF1_9ALVE)

HSP 1 Score: 358 bits (918), Expect = 3.990e-112
Identity = 206/454 (45.37%), Postives = 267/454 (58.81%), Query Frame = 1
Query:    7 LIIGLNKYSHDSAVCVLDWKGGSCLFAGEKERLTRRKHDGGDTADLVSHALSSIGSSLEDVRLVVSNNHHYRVAPFERRIPWSVAMGTTPESYATAENLIPGATHTELSHHLAHAWSTAAIAPFESGLIVVMDGMGEAHGAMSNAETAVVGLEGERLGTRHQAVEHDRDQEVEYYNDLRLMRELGADEYMAAGADAPGECNPHFQQVPAELVPQKAYREAESAYTF--------------VAGVDGGPPTITPIYKRWTLERSPPELYNHGFENMESLGAVYSRVSSHIFGDWNACGKVMGLAPWAAKWPMTDAPLPPPRLVSGS----LLSDGTDGNGFCVNWEAIERLPRPNELGDKSLRPFYAALAAEAQTGLEDAAMGFIAGLKERTGEK-----NMCLCGGVALNSVLNGKIAREA-GFERVFVPPYPGDEGIAVGCAAFGWHQRKLLL 1296
            L++GLNKYSHD ++C+   + G  LF GEKERLTR KH GGD  +LVSHAL  +G+SL DV LVV NNHH+R+APFE+R+PW+V+ G    ++    NL+  A   E+SHHLAHAW+  A +PF+ GL+ V DGMG+A  AM  AE                       +E  + +DL L         +AAG D      P   + P+E    + +REAE+ Y F              + G    P  + P++KRWT ER P EL+NHGFE+MESLGA+YSRVSSHIFGDWN CGKVMGLAPWA++W           L SG     L     + +   ++WE +E LP     G +  R F+A LA + Q+ LE+ ++ F+    + +  K     N+CL GGVALNSVLNGKI+ EA GF+ VFVP  PGDEGIAVGCAAFG H    L+
Sbjct:   34 LVVGLNKYSHDVSICIAS-RDGEFLFGGEKERLTRAKHAGGDAGELVSHALDRVGASLSDVGLVVQNNHHHRIAPFEKRLPWAVSQGLYDPTFLDPHNLLGHAPRVEVSHHLAHAWAAFAQSPFDDGLVFVSDGMGDARSAMQRAEAG---------------------EEGSFVHDLSLSP-------VAAGWDMTER--PGRMRDPSEG--WREFREAETLYVFRKEGAGRYQGKAKSLLGDAVSP--LVPVFKRWTEERGPSELFNHGFEHMESLGALYSRVSSHIFGDWNVCGKVMGLAPWASQWRSELTSEERGHLESGRGGGRLFWGDLEDSQLEIDWEFLESLPFGAGWGKRGSRAFHACLAEQVQSDLENVSLAFLKRQAQTSEGKWGVPPNLCLVGGVALNSVLNGKISSEATGFKEVFVPATPGDEGIAVGCAAFGVHHFSSLV 452          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig75688.15260.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G3R1_ECTSI3.600e-19863.17Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A0G4FRZ2_VITBC7.360e-13150.34Uncharacterized protein n=3 Tax=Vitrella brassicaf... [more]
A0A3M2ADF0_9BACT3.970e-12549.53PqqD family peptide modification chaperone n=1 Tax... [more]
A0A0M0JZH7_9EUKA3.450e-11747.59Carbamoyltransferase n=1 Tax=Chrysochromulina tobi... [more]
A0A7S3AC86_9RHOD7.740e-11647.06Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
W7TRB5_9STRA1.100e-11548.72Carbamoyltransferase n=2 Tax=Monodopsidaceae TaxID... [more]
A0A2A4PGL3_9BACT2.280e-11446.82Uncharacterized protein n=1 Tax=Planctomycetes bac... [more]
A0A7S3AA34_9RHOD1.880e-11347.06Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A7R9U4N9_9STRA1.990e-11246.24Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A0G4FTF1_9ALVE3.990e-11245.37Uncharacterized protein n=1 Tax=Chromera velia CCM... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig75688contigH-elongata_contig75688:18..2293 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score586.6
Seed ortholog evalue9.2e-165
Seed eggNOG ortholog2880.D7G3R1
EggNOG free text desc.Carbamoyltransferase C-terminus
EggNOG OGs2RKTV@2759,COG2192@1
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons4
Model size1299
Cds size1299
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig75688.15260.1prot_H-elongata_contig75688.15260.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig75688 18..2293 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931162.881556-CDS-H-elongata_contig75688:17..1191622931162.881556-CDS-H-elongata_contig75688:17..119Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig75688 18..119 -
1691679724.0038512-CDS-H-elongata_contig75688:17..1191691679724.0038512-CDS-H-elongata_contig75688:17..119Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig75688 18..119 -
1622931162.9060187-CDS-H-elongata_contig75688:429..7731622931162.9060187-CDS-H-elongata_contig75688:429..773Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig75688 430..773 -
1691679724.0153832-CDS-H-elongata_contig75688:429..7731691679724.0153832-CDS-H-elongata_contig75688:429..773Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig75688 430..773 -
1622931162.920742-CDS-H-elongata_contig75688:1094..12501622931162.920742-CDS-H-elongata_contig75688:1094..1250Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig75688 1095..1250 -
1691679724.0247977-CDS-H-elongata_contig75688:1094..12501691679724.0247977-CDS-H-elongata_contig75688:1094..1250Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig75688 1095..1250 -
1622931162.944088-CDS-H-elongata_contig75688:1596..22931622931162.944088-CDS-H-elongata_contig75688:1596..2293Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig75688 1597..2293 -
1691679724.034852-CDS-H-elongata_contig75688:1596..22931691679724.034852-CDS-H-elongata_contig75688:1596..2293Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig75688 1597..2293 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig75688.15260.1

>prot_H-elongata_contig75688.15260.1 ID=prot_H-elongata_contig75688.15260.1|Name=mRNA_H-elongata_contig75688.15260.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=433bp
NGLIIGLNKYSHDSAVCVLDWKGGSCLFAGEKERLTRRKHDGGDTADLVS
HALSSIGSSLEDVRLVVSNNHHYRVAPFERRIPWSVAMGTTPESYATAEN
LIPGATHTELSHHLAHAWSTAAIAPFESGLIVVMDGMGEAHGAMSNAETA
VVGLEGERLGTRHQAVEHDRDQEVEYYNDLRLMRELGADEYMAAGADAPG
ECNPHFQQVPAELVPQKAYREAESAYTFVAGVDGGPPTITPIYKRWTLER
SPPELYNHGFENMESLGAVYSRVSSHIFGDWNACGKVMGLAPWAAKWPMT
DAPLPPPRLVSGSLLSDGTDGNGFCVNWEAIERLPRPNELGDKSLRPFYA
ALAAEAQTGLEDAAMGFIAGLKERTGEKNMCLCGGVALNSVLNGKIAREA
GFERVFVPPYPGDEGIAVGCAAFGWHQRKLLLP
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mRNA from alignment at H-elongata_contig75688:18..2293-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig75688.15260.1 ID=mRNA_H-elongata_contig75688.15260.1|Name=mRNA_H-elongata_contig75688.15260.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2276bp|location=Sequence derived from alignment at H-elongata_contig75688:18..2293- (Himanthalia elongata Himel1 dioecious)
AATGGCCTGATCATCGGCCTGAACAAGTACAGCCACGATTCCGCTGTGTG TGTCTTGGATTGGAAGGGTGGTAGCTGTCTATTCGCTGGAGAAAAAGAGC GTCTCACCAGACGTAAGCACGACGGTGGAGACACGGCCGACCTGGTGTCC CATGCACTTAGCTCTATCGGCTCGTCGCTCGAAGATGTCCGCTTGGTGGT CTCCAACAATCACCACTATCGCGTTGCACCATTCGAGCGACGAATACCTT GGTCCGTCGCCATGGGCACCACCCCCGAGAGCTATGCTACTGCGGAGAAC CTGATCCCCGGAGCCACACATACGGAGTTGTCTCATCATCTGGCCCATGC TTGGAGCACCGCAGCCATCGCACCATTCGAGTCGGGGTTGATCGTGGTCA TGGACGGTATGGGCGAGGCTCACGGGGCGATGTCCAACGCCGAAACCGCC GTTGTTGGACTAGAGGGTGAACGGCTTGGAACTCGGCATCAAGCAGTGGA ACACGATCGAGACCAAGAGGTGGAGTACTACAATGACTTACGGCTCATGA GGGAGCTTGGGGCTGATGAGTACATGGCCGCAGGGGCAGACGCTCCAGGC GAATGTAATCCACATTTTCAGCAGGTTCCCGCGGAGCTGGTCCCACAAAA AGCGTACCGGGAGGCTGAGAGTGCATACACGTTCGTTGCAGGGGTAGGTG AGAAGCTCGGCATTCGAACAAGCGACGATGTACGTGATGCTGCTTGGGTC CATAATCTGGAGACAAAGTTCGAAAGATGGAACACTGTTTTCTGTTTTAA GGCGCCGAAAACGCCAGCATTCCATGGTACATGTTGGCGCCATGTGTTGT ACCTTCAAAATCATACTATTCTATTATAGCAATCCCCACGCAGCAGACCT CCGCCTTCCCCCGCCGTGTCGTGGTGTTACAAATTGATAATCTGCCGCAC GCATGACCCTAATCGGTGTACAATCTACCAAAATTTATTCAAAATCCACG TCGTAATGATTCGACTTCCTTTTTTTCCTTCCCCCTGTTGGAGATGGCGG GCCACCGACGATAACTCCGATTTATAAGAGGTGGACGCTTGAACGGTCCC CACCCGAGCTGTACAACCATGGGTTCGAGAACATGGAATCCCTGGGGGCT GTGTACAGCAGAGTCAGCAGCCACATCTTCGGCGACTGGAATGCTTGCGG TGAGAGTCAATGAGGCACCATCGTATCGAAACTCTCCTTATGTTATTCGA GTAGAGACATAATCAGCTCGGGAGTTCATTCGGGTGCCCCCAATGGCGGA CCATGTCTGTACAATACTGCGTGTGATATTCGGGTGTGTTCGTTTTCTGT AAATCGCAAAAACATCACTGCTTTCCGACGCCCTCCCTGGACGCAATTCG CGTGTTGTAGATCTTGCGAAACCCAATGAGCAATACAGTACATGGCGTAT TACCATACTGTACAAACATGTGGAAGCTCAGCTCGTTCACTGCATCAAAA CGCTGTATATTGGCCTACAGGGAAGGTCATGGGGCTCGCTCCGTGGGCTG CCAAGTGGCCGATGACAGATGCGCCTCTACCACCTCCGCGACTGGTATCG GGATCTCTCCTTTCCGACGGTACAGACGGGAACGGCTTTTGCGTTAACTG GGAGGCAATCGAGCGCCTGCCTCGGCCGAACGAGCTCGGTGATAAATCTC TCCGCCCCTTCTACGCCGCGTTGGCGGCCGAGGCGCAAACGGGGTTGGAG GATGCTGCTATGGGGTTCATCGCGGGCCTGAAGGAAAGAACCGGAGAAAA GAACATGTGTCTTTGTGGAGGAGTGGCTCTGAACAGCGTGCTCAACGGCA AGATCGCGCGAGAGGTAGGAAGGTTACTCCACGTTCGCGCGCCGAGAGTG AACCAACAACCCCTTCGATGGATCTCGCTCACCATTGTCTGAGTTGGACT GACTCCGATGAACGAAACGGGACAATCTGTCGGACTGTCATGTTTTTTAT TTCTGTATGTTTGCGTACAAACCCTCTAGCGTTCTCTACTCTCTCTCTCA ACAACTGCAGCGAACGATCGCCCCGTAATGCTTACACCCAATATTTCAAT CGCTTCCGTCCACGCACGCCCCCCCCCCGGCGCCCCACCTCCCCCGACGC ATATGCCTCCGATTGGTTAAACAGGCTGGATTTGAGCGCGTCTTTGTGCC CCCTTACCCCGGAGATGAGGGTATCGCTGTCGGCTGCGCCGCCTTCGGCT GGCATCAACGCAAGCTCCTCCTCCCC
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Coding sequence (CDS) from alignment at H-elongata_contig75688:18..2293-

>mRNA_H-elongata_contig75688.15260.1 ID=mRNA_H-elongata_contig75688.15260.1|Name=mRNA_H-elongata_contig75688.15260.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2598bp|location=Sequence derived from alignment at H-elongata_contig75688:18..2293- (Himanthalia elongata Himel1 dioecious)
AATGGCCTGATCATCGGCCTGAACAAGTACAGCCACGATTCCGCTGTGTG
TGTCTTGGATTGGAAGGGTGGTAGCTGTCTATTCGCTGGAGAAAAAGAGC
GTCTCACCAGACGTAAGCACGACGGTGGAGACACGGCCGACCTGGTGTCC
CATGCACTTAGCTCTATCGGCTCGTCGCTCGAAGATGTCCGCTTGGTGGT
CTCCAACAATCACCACTATCGCGTTGCACCATTCGAGCGACGAATACCTT
GGTCCGTCGCCATGGGCACCACCCCCGAGAGCTATGCTACTGCGGAGAAC
CTGATCCCCGGAGCCACACATACGGAGTTGTCTCATCATCTGGCCCATGC
TTGGAGCACCGCAGCCATCGCACCATTCGAGTCGGGGTTGATCGTGGTCA
TGGACGGTATGGGCGAGGCTCACGGGGCGATGTCCAACGCCGAAACCGCC
GTTGTTGGACTAGAGGGTGAACGGCTTGGAACTCGGCATCAAGCAGTGGA
ACACGATCGAGACCAAGAGGTGGAGTACTACAATGACTTACGGCTCATGA
GGGAGCTTGGGGCTGATGAGTACATGGCCGCAGGGGCAGACGCTCCAGGC
GAATGTAATCCACATTTTCAGCAGGTTCCCGCGGAGCTGGTCCCACAAAA
AGCGTACCGGGAGGCTGAGAGTGCATACACGTTCGTTGCAGGGGTAGAAT
GGCCTGATCATCGGCCTGAACAAGTACAGCCACGATTCCGCTGTGTGTGT
CTTGGATTGGAAGGGTGGTAGCTGTCTATTCGCTGGAGAAAAAGAGCGTC
TCACCAGACGTAAGCACGACGGTGGAGACACGGCCGACCTGGTGTCCCAT
GCACTTAGCTCTATCGGCTCGTCGCTCGAAGATGTCCGCTTGGTGGTCTC
CAACAATCACCACTATCGCGTTGCACCATTCGAGCGACGAATACCTTGGT
CCGTCGCCATGGGCACCACCCCCGAGAGCTATGCTACTGCGGAGAACCTG
ATCCCCGGAGCCACACATACGGAGTTGTCTCATCATCTGGCCCATGCTTG
GAGCACCGCAGCCATCGCACCATTCGAGTCGGGGTTGATCGTGGTCATGG
ACGGTATGGGCGAGGCTCACGGGGCGATGTCCAACGCCGAAACCGCCGTT
GTTGGACTAGAGGGTGAACGGCTTGGAACTCGGCATCAAGCAGTGGAACA
CGATCGAGACCAAGAGGTGGAGTACTACAATGACTTACGGCTCATGAGGG
AGCTTGGGGCTGATGAGTACATGGCCGCAGGGGCAGACGCTCCAGGCGAA
TGTAATCCACATTTTCAGCAGGTTCCCGCGGAGCTGGTCCCACAAAAAGC
GTACCGGGAGGCTGAGAGTGCATACACGTTCGTTGCAGGGGTAGATGGCG
GGCCACCGACGATAACTCCGATTTATAAGAGGTGGACGCTTGAACGGTCC
CCACCCGAGCTGTACAACCATGGGTTCGAGAACATGGAATCCCTGGGGGC
TGTGTACAGCAGAGTCAGCAGCCACATCTTCGGCGACTGGAATGCTTGCG
ATGGCGGGCCACCGACGATAACTCCGATTTATAAGAGGTGGACGCTTGAA
CGGTCCCCACCCGAGCTGTACAACCATGGGTTCGAGAACATGGAATCCCT
GGGGGCTGTGTACAGCAGAGTCAGCAGCCACATCTTCGGCGACTGGAATG
CTTGCGGGAAGGTCATGGGGCTCGCTCCGTGGGCTGCCAAGTGGCCGATG
ACAGATGCGCCTCTACCACCTCCGCGACTGGTATCGGGATCTCTCCTTTC
CGACGGTACAGACGGGAACGGCTTTTGCGTTAACTGGGAGGCAATCGAGC
GCCTGCCTCGGCCGAACGAGCTCGGTGATAAATCTCTCCGCCCCTTCTAC
GCCGCGTTGGCGGCCGAGGCGCAAACGGGGTTGGAGGATGCTGCTATGGG
GTTCATCGCGGGCCTGAAGGAAAGAACCGGAGAAAAGAACATGTGTCTTT
GTGGAGGAGTGGCTCTGAACAGCGTGCTCAACGGCAAGATCGCGCGAGAG
GGAAGGTCATGGGGCTCGCTCCGTGGGCTGCCAAGTGGCCGATGACAGAT
GCGCCTCTACCACCTCCGCGACTGGTATCGGGATCTCTCCTTTCCGACGG
TACAGACGGGAACGGCTTTTGCGTTAACTGGGAGGCAATCGAGCGCCTGC
CTCGGCCGAACGAGCTCGGTGATAAATCTCTCCGCCCCTTCTACGCCGCG
TTGGCGGCCGAGGCGCAAACGGGGTTGGAGGATGCTGCTATGGGGTTCAT
CGCGGGCCTGAAGGAAAGAACCGGAGAAAAGAACATGTGTCTTTGTGGAG
GAGTGGCTCTGAACAGCGTGCTCAACGGCAAGATCGCGCGAGAGGCTGGA
TTTGAGCGCGTCTTTGTGCCCCCTTACCCCGGAGATGAGGGTATCGCTGT
CGGCTGCGCCGCCTTCGGCTGGCATCAACGCAAGCTCCTCCTCCCCGCTG
GATTTGAGCGCGTCTTTGTGCCCCCTTACCCCGGAGATGAGGGTATCGCT
GTCGGCTGCGCCGCCTTCGGCTGGCATCAACGCAAGCTCCTCCTCCCC
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