mRNA_H-elongata_contig7568.15258.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig7568.15258.1 vs. uniprot
Match: A0A6H5KAN7_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAN7_9PHAE) HSP 1 Score: 136 bits (343), Expect = 8.210e-36 Identity = 68/107 (63.55%), Postives = 83/107 (77.57%), Query Frame = 1
Query: 1 MKKLAACVGKFSHSAVKNSELKTIQELSPVFSKVYELIRRNDTRWTTQRNMMERLLQLKEPVVEYFRRNSNDKRRLTSHDWNVTNQVCSILDPIADVNIKIQGAEDT 321
MK+LAA VG FSHSAV N ELK IQ L F +YELIRRNDTRW +Q MM RLL+LK+ +VEYFR N N+ R+L+S +W VTN+VCS+LD +A+V +KIQGA DT
Sbjct: 78 MKRLAAVVGVFSHSAVNNDELKDIQRLQEEFQIIYELIRRNDTRWASQHAMMVRLLKLKKAIVEYFRDNENNNRKLSSREWTVTNEVCSLLDVVAEVTVKIQGATDT 184
BLAST of mRNA_H-elongata_contig7568.15258.1 vs. uniprot
Match: A0A6H5KJ52_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ52_9PHAE) HSP 1 Score: 136 bits (343), Expect = 3.830e-35 Identity = 68/107 (63.55%), Postives = 83/107 (77.57%), Query Frame = 1
Query: 1 MKKLAACVGKFSHSAVKNSELKTIQELSPVFSKVYELIRRNDTRWTTQRNMMERLLQLKEPVVEYFRRNSNDKRRLTSHDWNVTNQVCSILDPIADVNIKIQGAEDT 321
MK+LAA VG FSHSAV N ELK IQ L F +YELIRRNDTRW +Q MM RLL+LK+ +VEYFR N N+ R+L+S +W VTN+VCS+LD +A+V +KIQGA DT
Sbjct: 406 MKRLAAVVGVFSHSAVNNDELKDIQRLQEEFQIIYELIRRNDTRWASQHAMMVRLLKLKKAIVEYFRDNENNNRKLSSREWTVTNEVCSLLDVVAEVTVKIQGATDT 512
BLAST of mRNA_H-elongata_contig7568.15258.1 vs. uniprot
Match: A0A6H5JGG8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGG8_9PHAE) HSP 1 Score: 129 bits (324), Expect = 1.420e-32 Identity = 60/107 (56.07%), Postives = 85/107 (79.44%), Query Frame = 1
Query: 1 MKKLAACVGKFSHSAVKNSELKTIQELSPVFSKVYELIRRNDTRWTTQRNMMERLLQLKEPVVEYFRRNSNDKRRLTSHDWNVTNQVCSILDPIADVNIKIQGAEDT 321
MKKLAA VG FSHSAV N ELK +Q L FS++YEL+RRNDTRWT+Q MM+R+L LK+P+ EYF++ ++R+LT ++W +TN+VCS+L +++V I++QG+ DT
Sbjct: 416 MKKLAAMVGVFSHSAVNNDELKELQRLEEGFSRIYELLRRNDTRWTSQFKMMDRVLALKKPISEYFKKYPQNERKLTPNEWTITNEVCSLLSDVSEVTIRMQGSVDT 522
BLAST of mRNA_H-elongata_contig7568.15258.1 vs. uniprot
Match: A0A6H5KZZ1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZZ1_9PHAE) HSP 1 Score: 123 bits (309), Expect = 2.410e-32 Identity = 58/107 (54.21%), Postives = 83/107 (77.57%), Query Frame = 1
Query: 1 MKKLAACVGKFSHSAVKNSELKTIQELSPVFSKVYELIRRNDTRWTTQRNMMERLLQLKEPVVEYFRRNSNDKRRLTSHDWNVTNQVCSILDPIADVNIKIQGAEDT 321
MKKLAA VG F+HSAV N ELK +Q L FS++YEL+RRNDTRWT+Q MM+R L LK+P+ EYF++ ++R+LT ++W + N+VCS+L +++V I++QG+ DT
Sbjct: 5 MKKLAAMVGVFNHSAVNNDELKELQRLEEGFSRIYELLRRNDTRWTSQFKMMDRCLALKKPISEYFKKYLQNERKLTPNEWTMINEVCSLLSNVSEVTIRMQGSVDT 111
BLAST of mRNA_H-elongata_contig7568.15258.1 vs. uniprot
Match: A0A6H5JRT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRT6_9PHAE) HSP 1 Score: 127 bits (318), Expect = 9.160e-32 Identity = 61/107 (57.01%), Postives = 81/107 (75.70%), Query Frame = 1
Query: 1 MKKLAACVGKFSHSAVKNSELKTIQELSPVFSKVYELIRRNDTRWTTQRNMMERLLQLKEPVVEYFRRNSNDKRRLTSHDWNVTNQVCSILDPIADVNIKIQGAEDT 321
MKKLAA VG FSHSAV N +LK +Q L VY+LIRRNDTRWT+Q MM+RLL LK+P+ EYFR ++ R+LT +W +TN+VCS+L +++V I++QGA+DT
Sbjct: 414 MKKLAALVGVFSHSAVNNDKLKELQRLEEDLHAVYQLIRRNDTRWTSQFKMMDRLLALKKPITEYFREQPHNSRKLTQPEWTITNEVCSLLSDVSEVTIRMQGAKDT 520
BLAST of mRNA_H-elongata_contig7568.15258.1 vs. uniprot
Match: A0A6H5JTB8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTB8_9PHAE) HSP 1 Score: 126 bits (317), Expect = 1.000e-31 Identity = 59/107 (55.14%), Postives = 84/107 (78.50%), Query Frame = 1
Query: 1 MKKLAACVGKFSHSAVKNSELKTIQELSPVFSKVYELIRRNDTRWTTQRNMMERLLQLKEPVVEYFRRNSNDKRRLTSHDWNVTNQVCSILDPIADVNIKIQGAEDT 321
MKKLAA VG FSHSAV N ELK +Q L FS++YEL+R NDTRWT+Q MM+R+L LK+P+ EYF++ ++R+LT ++W +TN+VCS+L +++V I++QG+ DT
Sbjct: 221 MKKLAAMVGVFSHSAVNNDELKELQRLEEGFSRIYELLRPNDTRWTSQFKMMDRVLALKKPISEYFKKYPQNERKLTPNEWTITNEVCSLLSDVSEVTIRMQGSVDT 327
BLAST of mRNA_H-elongata_contig7568.15258.1 vs. uniprot
Match: A0A6H5JZU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZU3_9PHAE) HSP 1 Score: 126 bits (316), Expect = 1.340e-31 Identity = 65/114 (57.02%), Postives = 83/114 (72.81%), Query Frame = 1
Query: 1 MKKLAACVGKFSHSAVKNSELKTIQELSPVFSKVYELIRRNDTRWTTQRNMMERLLQLKEPVVEYFRR-------NSNDKRRLTSHDWNVTNQVCSILDPIADVNIKIQGAEDT 321
MKKLAA VG FSHSAV N LK +Q L ++YE IRRNDTRWT+Q+ MM RLL LK+P+ EYFRR N KR+LT+H+W VTN+VCS+L+ +++V I++QGA DT
Sbjct: 223 MKKLAALVGVFSHSAVNNDMLKELQRLEADLHRIYETIRRNDTRWTSQQKMMGRLLILKKPISEYFRRLAQQNSQNKQLKRKLTAHEWTVTNEVCSLLETVSEVTIRMQGATDT 336
BLAST of mRNA_H-elongata_contig7568.15258.1 vs. uniprot
Match: A0A6H5JQI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQI6_9PHAE) HSP 1 Score: 124 bits (312), Expect = 4.810e-31 Identity = 64/114 (56.14%), Postives = 83/114 (72.81%), Query Frame = 1
Query: 1 MKKLAACVGKFSHSAVKNSELKTIQELSPVFSKVYELIRRNDTRWTTQRNMMERLLQLKEPVVEYFRR-------NSNDKRRLTSHDWNVTNQVCSILDPIADVNIKIQGAEDT 321
MKKLAA VG FSHSAV N LK +Q L ++YE IRRNDTRWT+Q+ MM RLL LK+P+ EYFRR N KR+LT+H+W VTN+VCS+L+ +++V I++QGA +T
Sbjct: 223 MKKLAALVGVFSHSAVNNDMLKELQRLEADLHRIYETIRRNDTRWTSQQKMMGRLLILKKPISEYFRRLAQQNSQNKQLKRKLTAHEWTVTNEVCSLLETVSEVTIRMQGATET 336
BLAST of mRNA_H-elongata_contig7568.15258.1 vs. uniprot
Match: A0A6H5KAS2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAS2_9PHAE) HSP 1 Score: 119 bits (298), Expect = 1.100e-29 Identity = 57/108 (52.78%), Postives = 82/108 (75.93%), Query Frame = 1
Query: 1 MKKLAACVGKFSHSAVKNSELKTIQELSPVFSKVYELIRRNDTRW-TTQRNMMERLLQLKEPVVEYFRRNSNDKRRLTSHDWNVTNQVCSILDPIADVNIKIQGAEDT 321
MKKLAA VG FSHSAV N ELK +Q L FS++YEL+RRNDTRW T+Q MM+R L LK+P+ E+F++ + R+LT ++W + N+VCS+L ++++ I++QG+ DT
Sbjct: 65 MKKLAAMVGVFSHSAVNNDELKELQRLEEGFSRIYELLRRNDTRWWTSQLKMMDRALALKKPISEFFKKYPQNDRKLTPNEWTIINEVCSLLADVSEITIRVQGSVDT 172
BLAST of mRNA_H-elongata_contig7568.15258.1 vs. uniprot
Match: A0A6H5KDJ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDJ6_9PHAE) HSP 1 Score: 105 bits (261), Expect = 3.460e-24 Identity = 61/113 (53.98%), Postives = 80/113 (70.80%), Query Frame = 1
Query: 1 MKKLAACVGKFSHSAVKNSELKTIQELSPVFSKVYELIRRNDTRWTTQRNMMERLLQLKEPVVEYFRR------NSNDKRRLTSHDWNVTNQVCSILDPIADVNIKIQGAEDT 321
MKKLAA VG FS SAV N+ LK +Q L ++YEL+RRNDT +Q MM RLL LK+P+ EYFRR N KR+L+SH+W VTN+VCS+L ++++ I+IQGA+DT
Sbjct: 82 MKKLAALVGVFSPSAV-NNMLKELQRLETDLHRIYELMRRNDT---SQFKMMGRLLTLKKPISEYFRRLPQIPSNKQLKRKLSSHEWIVTNEVCSLLGDVSEITIRIQGAQDT 190 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig7568.15258.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig7568.15258.1 >prot_H-elongata_contig7568.15258.1 ID=prot_H-elongata_contig7568.15258.1|Name=mRNA_H-elongata_contig7568.15258.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=107bp MKKLAACVGKFSHSAVKNSELKTIQELSPVFSKVYELIRRNDTRWTTQRNback to top mRNA from alignment at H-elongata_contig7568:9447..9895- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig7568.15258.1 ID=mRNA_H-elongata_contig7568.15258.1|Name=mRNA_H-elongata_contig7568.15258.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=449bp|location=Sequence derived from alignment at H-elongata_contig7568:9447..9895- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig7568:9447..9895- >mRNA_H-elongata_contig7568.15258.1 ID=mRNA_H-elongata_contig7568.15258.1|Name=mRNA_H-elongata_contig7568.15258.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=642bp|location=Sequence derived from alignment at H-elongata_contig7568:9447..9895- (Himanthalia elongata Himel1 dioecious)back to top |