mRNA_H-elongata_contig75514.15235.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig75514.15235.1
Unique NamemRNA_H-elongata_contig75514.15235.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig75514.15235.1 vs. uniprot
Match: D7FI93_ECTSI (DNA replication licensing factor MCM7 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FI93_ECTSI)

HSP 1 Score: 327 bits (838), Expect = 1.350e-105
Identity = 172/175 (98.29%), Postives = 173/175 (98.86%), Query Frame = 1 
Query:    1 MKAGLIADTFLQAQKIFRHKKSYDEMEVSTSMEAAVDEAAEDPEVFSKLARSIAPEIYGHEDIKKALLLQLVGGVTRKLPDGMRIRGDINICLMGDPGVAKSQLLKYIASVAPRGVYTTGKGSSGVGLTAAVSRDAVTGEMALEGGALVLADRGICAIDEFDKMDESDRTAIHEV 525
            MKAGLIADTFLQAQ IFRHKKSYDEMEVS SMEAAVDEAAEDPEVFSKLARSIAPEIYGHEDIKKALLLQLVGGVTRKLPDGMRIRGDINICLMGDPGVAKSQLLKYIASVAPRGVYTTGKGSSGVGLTAAVS+DAVTGEMALEGGALVLADRGICAIDEFDKMDESDRTAIHEV
Sbjct:  295 MKAGLIADTFLQAQHIFRHKKSYDEMEVSASMEAAVDEAAEDPEVFSKLARSIAPEIYGHEDIKKALLLQLVGGVTRKLPDGMRIRGDINICLMGDPGVAKSQLLKYIASVAPRGVYTTGKGSSGVGLTAAVSKDAVTGEMALEGGALVLADRGICAIDEFDKMDESDRTAIHEV 469
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BLAST of mRNA_H-elongata_contig75514.15235.1 vs. uniprot
Match: A0A835YVG8_9STRA (DNA replication licensing factor MCM7 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVG8_9STRA)

HSP 1 Score: 281 bits (719), Expect = 1.390e-87
Identity = 144/175 (82.29%), Postives = 157/175 (89.71%), Query Frame = 1 
Query:    1 MKAGLIADTFLQAQKIFRHKKSYDEMEVSTSMEAAVDEAAEDPEVFSKLARSIAPEIYGHEDIKKALLLQLVGGVTRKLPDGMRIRGDINICLMGDPGVAKSQLLKYIASVAPRGVYTTGKGSSGVGLTAAVSRDAVTGEMALEGGALVLADRGICAIDEFDKMDESDRTAIHEV 525
            MKAGLIAD +++ Q IFRHKK+YDE E +  +   + EAA+DP +F  LARSIAPEIYGHED+KKALLLQLVGGVTR LPDGM+IRGDINICLMGDPGVAKSQLLKYIASVAPRGVYTTGKGSSGVGLTAAVSRD VTG+MALEGGALVLAD GIC IDEFDKM+ESDRTAIHEV
Sbjct:  295 MKAGLIADIYVEVQHIFRHKKNYDEFEDTPELAQRLSEAADDPNIFRLLARSIAPEIYGHEDVKKALLLQLVGGVTRTLPDGMKIRGDINICLMGDPGVAKSQLLKYIASVAPRGVYTTGKGSSGVGLTAAVSRDPVTGDMALEGGALVLADHGICCIDEFDKMEESDRTAIHEV 469
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BLAST of mRNA_H-elongata_contig75514.15235.1 vs. uniprot
Match: A0A096ZSQ2_9BASI (DNA helicase (Fragment) n=36 Tax=Wallemia TaxID=148959 RepID=A0A096ZSQ2_9BASI)

HSP 1 Score: 252 bits (643), Expect = 7.160e-83
Identity = 126/173 (72.83%), Postives = 149/173 (86.13%), Query Frame = 1 
Query:    7 AGLIADTFLQAQKIFRHKKSYDEMEVSTSMEAAVDEAAEDPEVFSKLARSIAPEIYGHEDIKKALLLQLVGGVTRKLPDGMRIRGDINICLMGDPGVAKSQLLKYIASVAPRGVYTTGKGSSGVGLTAAVSRDAVTGEMALEGGALVLADRGICAIDEFDKMDESDRTAIHEV 525
            AGL+ DT+L+AQ + + KK YDEME++  +E  + E  +DP +++KLA SIAPEIYGH+D+KKALLL LVGGVT+ + DGM+IRGDIN+CLMGDPGVAKSQLLKYI+ +APRGVYTTG+GSSGVGLTAAV RD VT EM LEGGALVLAD GIC IDEFDKM+ESDRTAIHEV
Sbjct:    1 AGLLHDTYLEAQYVHQLKKQYDEMELTPEIEEKIAELTQDPNLYAKLASSIAPEIYGHDDVKKALLLLLVGGVTKGMGDGMKIRGDINVCLMGDPGVAKSQLLKYISKIAPRGVYTTGRGSSGVGLTAAVMRDPVTDEMVLEGGALVLADNGICCIDEFDKMEESDRTAIHEV 173
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BLAST of mRNA_H-elongata_contig75514.15235.1 vs. uniprot
Match: A0A5K6V3Y1_9FUNG (DNA replication licensing factor MCM7 (Fragment) n=30 Tax=Umbelopsis TaxID=64561 RepID=A0A5K6V3Y1_9FUNG)

HSP 1 Score: 254 bits (649), Expect = 1.430e-82
Identity = 129/172 (75.00%), Postives = 149/172 (86.63%), Query Frame = 1 
Query:    1 MKAGLIADTFLQAQKIFRHKKSYDEMEVSTSMEAAVDEAAEDPEVFSKLARSIAPEIYGHEDIKKALLLQLVGGVTRKLPDGMRIRGDINICLMGDPGVAKSQLLKYIASVAPRGVYTTGKGSSGVGLTAAVSRDAVTGEMALEGGALVLADRGICAIDEFDKMDESDRTAI 516
            M+AGL+ DT+L+AQ I R KK YD+ME++  + A + E   DP++++KLARSIAPEIYGHED+KKALLL LVGGVT+ + DGM+IRGDINICLMGDPGVAKSQLLK+IA VAPRGVYTTG+GSSGVGLTAAV RD +T EM LEGGALVLAD GIC IDEFDKMDESDRTAI
Sbjct:  114 MRAGLLTDTYLEAQHIHRLKKQYDQMEMTPEIAAKIAELERDPDIYNKLARSIAPEIYGHEDVKKALLLLLVGGVTKIVGDGMKIRGDINICLMGDPGVAKSQLLKFIAKVAPRGVYTTGRGSSGVGLTAAVMRDPITDEMVLEGGALVLADNGICCIDEFDKMDESDRTAI 285
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BLAST of mRNA_H-elongata_contig75514.15235.1 vs. uniprot
Match: A0A8H3EAK7_9AGAM (DNA replication licensing factor MCM7 n=1 Tax=Rhizoctonia solani TaxID=456999 RepID=A0A8H3EAK7_9AGAM)

HSP 1 Score: 254 bits (649), Expect = 8.670e-81
Identity = 129/175 (73.71%), Postives = 149/175 (85.14%), Query Frame = 1 
Query:    1 MKAGLIADTFLQAQKIFRHKKSYDEMEVSTSMEAAVDEAAEDPEVFSKLARSIAPEIYGHEDIKKALLLQLVGGVTRKLPDGMRIRGDINICLMGDPGVAKSQLLKYIASVAPRGVYTTGKGSSGVGLTAAVSRDAVTGEMALEGGALVLADRGICAIDEFDKMDESDRTAIHEV 525
            ++AGL+ DT+L+A  I + +K YDEME++  +E  ++    DP V+SKLA SIAPEIYGHED+KKALLL LVGGVT+ + DGM+IRGDIN+CLMGDPGVAKSQLLKYI+ VAPRGVYTTGKGSSGVGLTAAV RD VT EM LEGGALVLAD GIC IDEFDKM+ESDRTAIHEV
Sbjct:  137 IRAGLLTDTYLEAHSINQLRKQYDEMELTPEIEMDIERLKRDPTVYSKLAASIAPEIYGHEDVKKALLLLLVGGVTKNMGDGMKIRGDINVCLMGDPGVAKSQLLKYISKVAPRGVYTTGKGSSGVGLTAAVMRDPVTDEMVLEGGALVLADNGICCIDEFDKMEESDRTAIHEV 311
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BLAST of mRNA_H-elongata_contig75514.15235.1 vs. uniprot
Match: U3PF04_9FUNG (DNA replication licensing factor MCM7 (Fragment) n=1 Tax=Rhopalomyces elegans TaxID=78913 RepID=U3PF04_9FUNG)

HSP 1 Score: 249 bits (635), Expect = 1.340e-80
Identity = 125/172 (72.67%), Postives = 148/172 (86.05%), Query Frame = 1 
Query:    1 MKAGLIADTFLQAQKIFRHKKSYDEMEVSTSMEAAVDEAAEDPEVFSKLARSIAPEIYGHEDIKKALLLQLVGGVTRKLPDGMRIRGDINICLMGDPGVAKSQLLKYIASVAPRGVYTTGKGSSGVGLTAAVSRDAVTGEMALEGGALVLADRGICAIDEFDKMDESDRTAI 516
            M+AGLIADT+L+AQ I + KK Y EM  + +++  +DE A D + ++KLA+SIAPEIYGHED+KK+LLLQLV GVT+++ DGMRIRGDINICLMGDPGVAKSQ+LKYI+ VAPRGVYTTG+GSSGVGLTAAV RD VT EM LEGGALVLAD G+C IDEFDKMD+SDRT I
Sbjct:  103 MRAGLIADTYLEAQHIHQMKKQYTEMHATPAVQRRIDELANDLDAYTKLAKSIAPEIYGHEDVKKSLLLQLVSGVTKQVQDGMRIRGDINICLMGDPGVAKSQMLKYISKVAPRGVYTTGRGSSGVGLTAAVMRDPVTDEMVLEGGALVLADNGVCCIDEFDKMDDSDRTRI 274
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BLAST of mRNA_H-elongata_contig75514.15235.1 vs. uniprot
Match: A0A8H7UGE7_MORIS (DNA replication licensing factor MCM7 n=1 Tax=Mortierella isabellina TaxID=91625 RepID=A0A8H7UGE7_MORIS)

HSP 1 Score: 261 bits (668), Expect = 2.480e-80
Identity = 132/175 (75.43%), Postives = 153/175 (87.43%), Query Frame = 1 
Query:    1 MKAGLIADTFLQAQKIFRHKKSYDEMEVSTSMEAAVDEAAEDPEVFSKLARSIAPEIYGHEDIKKALLLQLVGGVTRKLPDGMRIRGDINICLMGDPGVAKSQLLKYIASVAPRGVYTTGKGSSGVGLTAAVSRDAVTGEMALEGGALVLADRGICAIDEFDKMDESDRTAIHEV 525
            M+AGL+ DT+L+AQ I R KK YD+ME++  +EA + E   DP++++KLARSIAPEIYGHED+KKALLL LVGGVT+ + DGM+IRGDINICLMGDPGVAKSQLLK+IA VAPRGVYTTG+GSSGVGLTAAV RD +T EM LEGGALVLAD GIC IDEFDKMD+SDRTAIHEV
Sbjct:  304 MRAGLLTDTYLEAQHIHRLKKQYDQMELTPEIEAKLAELERDPDIYNKLARSIAPEIYGHEDVKKALLLLLVGGVTKTVGDGMKIRGDINICLMGDPGVAKSQLLKFIAKVAPRGVYTTGRGSSGVGLTAAVMRDPITDEMVLEGGALVLADNGICCIDEFDKMDDSDRTAIHEV 478
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BLAST of mRNA_H-elongata_contig75514.15235.1 vs. uniprot
Match: F0YGS7_AURAN (DNA replication licensing factor MCM7 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YGS7_AURAN)

HSP 1 Score: 257 bits (657), Expect = 3.100e-80
Identity = 129/175 (73.71%), Postives = 152/175 (86.86%), Query Frame = 1 
Query:    1 MKAGLIADTFLQAQKIFRHKKSYDEMEVSTSMEAAVDEAAEDPEVFSKLARSIAPEIYGHEDIKKALLLQLVGGVTRKLPDGMRIRGDINICLMGDPGVAKSQLLKYIASVAPRGVYTTGKGSSGVGLTAAVSRDAVTGEMALEGGALVLADRGICAIDEFDKMDESDRTAIHEV 525
            MKAGLI+DTFL+A  + + KK+Y E+E    ++A +D+ A+ P+ +S+L+RSIAPEI+GHED+K+ALLLQLVGGVTR L DG+R+RGD+NICLMGDPGVAKSQLLK IAS +PRGVYTTGKGSSGVGLTAAV RDA T EM+LEGGALVLAD GIC IDEFDKMDE DRTAIHEV
Sbjct:  303 MKAGLISDTFLEAMSVDKEKKNYSEIEADDKVDALIDDVADSPDAYSRLSRSIAPEIFGHEDVKRALLLQLVGGVTRTLGDGVRLRGDVNICLMGDPGVAKSQLLKSIASTSPRGVYTTGKGSSGVGLTAAVVRDATTSEMSLEGGALVLADCGICCIDEFDKMDEHDRTAIHEV 477
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BLAST of mRNA_H-elongata_contig75514.15235.1 vs. uniprot
Match: A0A4P9XML7_9FUNG (DNA replication licensing factor MCM7 (Fragment) n=1 Tax=Thamnocephalis sphaerospora TaxID=78915 RepID=A0A4P9XML7_9FUNG)

HSP 1 Score: 257 bits (657), Expect = 4.010e-80
Identity = 126/175 (72.00%), Postives = 153/175 (87.43%), Query Frame = 1 
Query:    1 MKAGLIADTFLQAQKIFRHKKSYDEMEVSTSMEAAVDEAAEDPEVFSKLARSIAPEIYGHEDIKKALLLQLVGGVTRKLPDGMRIRGDINICLMGDPGVAKSQLLKYIASVAPRGVYTTGKGSSGVGLTAAVSRDAVTGEMALEGGALVLADRGICAIDEFDKMDESDRTAIHEV 525
            M+AGLIADT+L+A  + + KK Y +M+ + +++  +DE A DP+ ++KLA+SIAPEIYGHED+KKALLLQL+ GVT+++ DGMRIRGDIN+CLMGDPGVAKSQ+LKYI+ VAPRGVYTTG+GSSGVGLTAAV RD VT EM LEGGALVLAD GIC IDEFDKMD++DRTAIHEV
Sbjct:  119 MRAGLIADTYLEAHHVHQMKKQYTQMQATPAVQRRIDELAADPDAYTKLAKSIAPEIYGHEDVKKALLLQLISGVTKQVQDGMRIRGDINVCLMGDPGVAKSQMLKYISKVAPRGVYTTGRGSSGVGLTAAVMRDPVTDEMVLEGGALVLADNGICCIDEFDKMDDADRTAIHEV 293
[Close]
BLAST of mRNA_H-elongata_contig75514.15235.1 vs. uniprot
Match: A0A8H7PNS9_9FUNG (DNA replication licensing factor MCM7 n=1 Tax=Umbelopsis vinacea TaxID=44442 RepID=A0A8H7PNS9_9FUNG)

HSP 1 Score: 260 bits (664), Expect = 9.240e-80
Identity = 131/175 (74.86%), Postives = 151/175 (86.29%), Query Frame = 1 
Query:    1 MKAGLIADTFLQAQKIFRHKKSYDEMEVSTSMEAAVDEAAEDPEVFSKLARSIAPEIYGHEDIKKALLLQLVGGVTRKLPDGMRIRGDINICLMGDPGVAKSQLLKYIASVAPRGVYTTGKGSSGVGLTAAVSRDAVTGEMALEGGALVLADRGICAIDEFDKMDESDRTAIHEV 525
            M+AGL+ DT+L+AQ I R KK YD+ME++  +   + E   DPE+++KLARSIAPEIYGHED+KKALLL LVGGVT+ + DGM+IRGDINICLMGDPGVAKSQLLK+IA VAPRGVYTTG+GSSGVGLTAAV RD +T EM LEGGALVLAD GIC IDEFDKMDE+DRTAIHEV
Sbjct:  302 MRAGLLTDTYLEAQNIHRLKKQYDQMEMTPDIAEKIAELERDPEIYNKLARSIAPEIYGHEDVKKALLLLLVGGVTKNVVDGMKIRGDINICLMGDPGVAKSQLLKFIAKVAPRGVYTTGRGSSGVGLTAAVMRDPITDEMVLEGGALVLADNGICCIDEFDKMDETDRTAIHEV 476
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig75514.15235.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FI93_ECTSI1.350e-10598.29DNA replication licensing factor MCM7 n=2 Tax=Ecto... [more]
A0A835YVG8_9STRA1.390e-8782.29DNA replication licensing factor MCM7 n=1 Tax=Trib... [more]
A0A096ZSQ2_9BASI7.160e-8372.83DNA helicase (Fragment) n=36 Tax=Wallemia TaxID=14... [more]
A0A5K6V3Y1_9FUNG1.430e-8275.00DNA replication licensing factor MCM7 (Fragment) n... [more]
A0A8H3EAK7_9AGAM8.670e-8173.71DNA replication licensing factor MCM7 n=1 Tax=Rhiz... [more]
U3PF04_9FUNG1.340e-8072.67DNA replication licensing factor MCM7 (Fragment) n... [more]
A0A8H7UGE7_MORIS2.480e-8075.43DNA replication licensing factor MCM7 n=1 Tax=Mort... [more]
F0YGS7_AURAN3.100e-8073.71DNA replication licensing factor MCM7 n=1 Tax=Aure... [more]
A0A4P9XML7_9FUNG4.010e-8072.00DNA replication licensing factor MCM7 (Fragment) n... [more]
A0A8H7PNS9_9FUNG9.240e-8074.86DNA replication licensing factor MCM7 n=1 Tax=Umbe... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig75514contigH-elongata_contig75514:1..2669 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score330.1
Seed ortholog evalue6.3e-88
Seed eggNOG ortholog2880.D7FI93
Preferred nameMCM7
KEGG koko:K02210,ko:K05666
KEGG TC3.A.1.208.2
KEGG Pathwayko01523,ko01524,ko02010,ko03030,ko04110,ko04111,ko04113,ko04976,map01523,map01524,map02010,map03030,map04110,map04111,map04113,map04976
KEGG ModuleM00285
GOsGO:0000166,GO:0000228,GO:0000278,GO:0000724,GO:0000725,GO:0000727,GO:0000785,GO:0000790,GO:0003674,GO:0003676,GO:0003677,GO:0003682,GO:0003688,GO:0003690,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005656,GO:0005657,GO:0005694,GO:0005737,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006267,GO:0006268,GO:0006270,GO:0006271,GO:0006281,GO:0006302,GO:0006310,GO:0006325,GO:0006342,GO:0006348,GO:0006355,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007049,GO:0008094,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016043,GO:0016458,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019219,GO:0019222,GO:0022402,GO:0022607,GO:0022616,GO:0030466,GO:0030554,GO:0031261,GO:0031298,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031974,GO:0031981,GO:0032392,GO:0032508,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0032993,GO:0033260,GO:0033554,GO:0034622,GO:0034641,GO:0034645,GO:0035639,GO:0036094,GO:0036387,GO:0036388,GO:0040029,GO:0042555,GO:0042623,GO:0043142,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043565,GO:0043596,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044451,GO:0044454,GO:0044464,GO:0044786,GO:0045814,GO:0045892,GO:0045934,GO:0046483,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051276,GO:0051716,GO:0060255,GO:0065003,GO:0065004,GO:0065007,GO:0070013,GO:0071103,GO:0071162,GO:0071704,GO:0071824,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:0097367,GO:0097373,GO:1901265,GO:1901360,GO:1901363,GO:1901576,GO:1902292,GO:1902299,GO:1902315,GO:1902679,GO:1902969,GO:1902975,GO:1903047,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2001141
EggNOG free text desc.DNA replication initiation
EggNOG OGsCOG1241@1,KOG0482@2759
EC3.6.4.12
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01009,ko02000,ko03032
Hectar predicted targeting categoryother localisation
Exons5
Model size525
Cds size525
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig75514.15235.1prot_H-elongata_contig75514.15235.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig75514 1..2669 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931160.6578865-CDS-H-elongata_contig75514:0..741622931160.6578865-CDS-H-elongata_contig75514:0..74Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig75514 1..74 +
1691679723.2031996-CDS-H-elongata_contig75514:0..741691679723.2031996-CDS-H-elongata_contig75514:0..74Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig75514 1..74 +
1622931160.6767068-CDS-H-elongata_contig75514:427..4851622931160.6767068-CDS-H-elongata_contig75514:427..485Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig75514 428..485 +
1691679723.2178853-CDS-H-elongata_contig75514:427..4851691679723.2178853-CDS-H-elongata_contig75514:427..485Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig75514 428..485 +
1622931160.6889868-CDS-H-elongata_contig75514:1005..11561622931160.6889868-CDS-H-elongata_contig75514:1005..1156Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig75514 1006..1156 +
1691679723.2261472-CDS-H-elongata_contig75514:1005..11561691679723.2261472-CDS-H-elongata_contig75514:1005..1156Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig75514 1006..1156 +
1622931160.7039065-CDS-H-elongata_contig75514:2006..21161622931160.7039065-CDS-H-elongata_contig75514:2006..2116Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig75514 2007..2116 +
1691679723.234816-CDS-H-elongata_contig75514:2006..21161691679723.234816-CDS-H-elongata_contig75514:2006..2116Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig75514 2007..2116 +
1622931160.717633-CDS-H-elongata_contig75514:2537..26691622931160.717633-CDS-H-elongata_contig75514:2537..2669Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig75514 2538..2669 +
1691679723.24418-CDS-H-elongata_contig75514:2537..26691691679723.24418-CDS-H-elongata_contig75514:2537..2669Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig75514 2538..2669 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig75514.15235.1

>prot_H-elongata_contig75514.15235.1 ID=prot_H-elongata_contig75514.15235.1|Name=mRNA_H-elongata_contig75514.15235.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=175bp
MKAGLIADTFLQAQKIFRHKKSYDEMEVSTSMEAAVDEAAEDPEVFSKLA
RSIAPEIYGHEDIKKALLLQLVGGVTRKLPDGMRIRGDINICLMGDPGVA
KSQLLKYIASVAPRGVYTTGKGSSGVGLTAAVSRDAVTGEMALEGGALVL
ADRGICAIDEFDKMDESDRTAIHEV
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mRNA from alignment at H-elongata_contig75514:1..2669+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig75514.15235.1 ID=mRNA_H-elongata_contig75514.15235.1|Name=mRNA_H-elongata_contig75514.15235.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2669bp|location=Sequence derived from alignment at H-elongata_contig75514:1..2669+ (Himanthalia elongata Himel1 dioecious)
ATGAAGGCGGGGCTTATCGCGGACACGTTCTTGCAGGCACAGAAAATTTT
CCGCCACAAGAAGAGCTACGACGAGTGAGCGCTTGATATTACTCGTTGCC
AATGTCTGCGCATGTGTGCATCTTTTTATGCCTGTGTCTTTATTCTGTGT
TTGCTTTTTTGAGGTTCGCGAGTATATGTGTTAAATGTTAAGTGCTTGGC
CTTCCATCCGTGCTTCTACGCTTGACCTATTGGGCCTATTCTAGGAGAGA
CAGACGTTCCCGCGTGCCCCAGTTGTCTCTTGTAATTCACCCTCCCACCC
CCCCCTCTCTCGTTGAAAACGTGCTAGTCTCAATATACACCCTAATATCC
GGTTTATACGCGCGCGCGGTACTCTCTCTCTACTCACGGCCGCGTCCGCC
TCGTCGACGTTTGTATCCCTGCCTCAGGATGGAAGTCTCCACGTCGATGG
AGGCGGCGGTGGACGAGGCTGCCGAAGACCCAGAGGTGAGCAACACTACT
GCTGAAGTTTCAAGTTTCCTGCAGACCGACCGCAGCAACGTGCTGCATGT
GTGATCGAGCTTTCGCTCAGCCCGCGGGAAATATTCCGCTCTACAGCTTG
GTCGCGGCCCCGCTGCTACCGCCACTGCTGTCGCTTTTGCTGTTGCTGTT
TCTTGTGGCGATTTGCCAAGTGGGAAGAGGAAAAGAGGCCCGCAGGAGCA
GAGCCTGCTTCGGCACGGCGCGTCCCCGTCCCTGCTACCGAGTATAGCGG
ATGTCCGACCAAAGGCCCTGGTAAAAAACATCAGTGTTGTCGACAATGGC
TTCGCGCGGTTTTCAGCAACGCTCGTGGAGCGATAAGAATTTTCGAGTCG
CGAGATACCCAAATGCTAGCTGGCAAAATGTGTAAAAAATGACTGCGGTC
TCTCAAGTAGCTTTGTATCCCCTCCCCCCCCCCTTTCCTGTCCCTCTATT
CTAAACGTGGTTATCTTCACGGCCGATAAACGCGGCCGTCTTACACACGT
AGTAGGTGTTCTCGAAGCTGGCGCGGTCGATCGCTCCCGAGATCTACGGG
CACGAGGACATCAAGAAAGCGTTATTGCTGCAGCTGGTGGGTGGGGTCAC
GAGGAAATTACCAGATGGAATGCGCATCCGAGGGGACATCAACATCTGTC
TCATGGGTGGGTGAAGGGAAATCGCGGCGTTGGAGGCTAGCGGTTCGGCT
GCAGACCGATTTCAGAAGCGGAAAAGGCTGAACTCCGCCGTCGGAATCTT
TCCTAGCTTGGCTTTGCTTCGGCAGGGCGGGTATAGACTTGGACATTTTG
TCAGCTGTTGCCAGGCTCCTTTGGCATCTGGGCCTCTCTGCGAGGCACCT
GCGTGGAGAGATATACATCTGGCGCTTAGAGCTGCTGCATTCGGTTGAAG
TACGACGGAGGCAGGGCAGTGTGTCGAAGTTGACGTTAGTGTACGCAAGC
ACCCACCCACCCAAACACTCGAGGGGAGGGGAGAGGGGGGTAGGAGGTAG
ATAAGGGATATTCCCGCCCGATTTTCCCCCCGACAAGGCACGTGCGCAAC
AGCTACAGCAAACACCACAAGCTTGAGAAGCTATCGCTGTGAGCTTTCGG
CAAACCTTAGCTTCCGGCGTCTCTGTTGTGCTGCCTGCGTAATAGAGAAA
GCAAGGGTCTGGGCGGGGTGGTGCTATGTTTGTCCCCGGGGTGTGCTACA
TACCATATGCTCTACAGCGTGCCCTGTCACCTCTGGCGGCGCACTTGAAG
CAGAGCGGGAATTATATTCGGTTTTGACACACAGCGGCTAACACGGCTCT
TTTAGGTTGTCGGAACTCCCTCTATTCTCCACTCGGCGCGTGTTGTTTTG
GCTGCGCAATTGGATCGTGCGCGCTCGGGGGGGGTAGATCCTTAGAAAGA
CGCACGTTGTGCCGGGTTGTTGTTGCGTCCGTGTGGAGTATTTGCCGAGT
TCGAACTCGTTCGCGGGTCTCGTCCCGTCCCCTTCACTATCATCTGCCAT
CCACAGGCGATCCTGGGGTGGCCAAGTCTCAGCTGCTCAAGTATATCGCT
TCCGTCGCTCCGAGAGGCGTTTACACCACGGGAAAAGGGAGCTCTGGGGT
CGGTTTGACTGCGGCGGTAAGGCGACAACTTGGTTGCTATTCTCGTGACT
CGTGGAGCGCTATGGATACGAAGCGCGTCGTGTTGTGTCGTGTTGTGTAC
TTGCTAGTCTGGTCCTATCACAGATATGATCACAGAGTAGAGAGCGATCC
GAAATGCAGCAATGAGACCAGCGGCAAAGTATTTGCAAAACAAAAGCCCG
CCTCTAAAGAGGGACAAGAAAATATAATCTCGTTTTATCTTCGAAGCGAT
CCCTTTTGAGAGAGAGAGAGAGAGAGGCGAATGAGAAAAAAAGTTGCGCT
CGGTTTCGCTCCGGAAGACCTTGGCGATGATGCACGTTCTCTCTCACCCC
CGCCCGACCCTCCAAACCCTGCGCGGGCTACCGGGTAGATGTCATAGGCT
GGAAATACCCTATTTCGATCGTGTCATGCTCGCTCAGGTGAGCAGGGATG
CCGTAACGGGCGAGATGGCACTAGAAGGCGGCGCCCTGGTGCTTGCTGAC
CGTGGCATCTGCGCTATCGATGAATTCGATAAGATGGACGAGTCGGACCG
GACGGCTATTCACGAGGTA
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Coding sequence (CDS) from alignment at H-elongata_contig75514:1..2669+

>mRNA_H-elongata_contig75514.15235.1 ID=mRNA_H-elongata_contig75514.15235.1|Name=mRNA_H-elongata_contig75514.15235.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1050bp|location=Sequence derived from alignment at H-elongata_contig75514:1..2669+ (Himanthalia elongata Himel1 dioecious)
ATGAAGGCGGGGCTTATCGCGGACACGTTCTTGCAGGCACAGAAAATTTT
CCGCCACAAGAAGAGCTACGACGAATGAAGGCGGGGCTTATCGCGGACAC
GTTCTTGCAGGCACAGAAAATTTTCCGCCACAAGAAGAGCTACGACGAGA
TGGAAGTCTCCACGTCGATGGAGGCGGCGGTGGACGAGGCTGCCGAAGAC
CCAGAGGATGGAAGTCTCCACGTCGATGGAGGCGGCGGTGGACGAGGCTG
CCGAAGACCCAGAGGTGTTCTCGAAGCTGGCGCGGTCGATCGCTCCCGAG
ATCTACGGGCACGAGGACATCAAGAAAGCGTTATTGCTGCAGCTGGTGGG
TGGGGTCACGAGGAAATTACCAGATGGAATGCGCATCCGAGGGGACATCA
ACATCTGTCTCATGGGTGTTCTCGAAGCTGGCGCGGTCGATCGCTCCCGA
GATCTACGGGCACGAGGACATCAAGAAAGCGTTATTGCTGCAGCTGGTGG
GTGGGGTCACGAGGAAATTACCAGATGGAATGCGCATCCGAGGGGACATC
AACATCTGTCTCATGGGCGATCCTGGGGTGGCCAAGTCTCAGCTGCTCAA
GTATATCGCTTCCGTCGCTCCGAGAGGCGTTTACACCACGGGAAAAGGGA
GCTCTGGGGTCGGTTTGACTGCGGCGGCGATCCTGGGGTGGCCAAGTCTC
AGCTGCTCAAGTATATCGCTTCCGTCGCTCCGAGAGGCGTTTACACCACG
GGAAAAGGGAGCTCTGGGGTCGGTTTGACTGCGGCGGTGAGCAGGGATGC
CGTAACGGGCGAGATGGCACTAGAAGGCGGCGCCCTGGTGCTTGCTGACC
GTGGCATCTGCGCTATCGATGAATTCGATAAGATGGACGAGTCGGACCGG
ACGGCTATTCACGAGGTAGTGAGCAGGGATGCCGTAACGGGCGAGATGGC
ACTAGAAGGCGGCGCCCTGGTGCTTGCTGACCGTGGCATCTGCGCTATCG
ATGAATTCGATAAGATGGACGAGTCGGACCGGACGGCTATTCACGAGGTA
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