mRNA_H-elongata_contig75145.15194.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig75145.15194.1 vs. uniprot
Match: D7G4V6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4V6_ECTSI) HSP 1 Score: 260 bits (664), Expect = 1.480e-84 Identity = 129/197 (65.48%), Postives = 161/197 (81.73%), Query Frame = 1
Query: 1 GLQYLLIFGALLLSAIIIYGALYCVVMPQRLHDRPIYFDYSSRATTGGATATVDFQAQHTQWDLALLPIPIVERPRKKLLRPGQHYEVGLELLMPTSYVNRKVGVFMVHTTLMDDQDSVLATSARPAMLPHTSSLLKGLTMLFAWPLYLLGLKKEAETISVSCIDFYKASHLHCASRHRHPLSKVKVTVSSGRVQLY 591
GLQYLL+F A+LLSA+++YGALY +VMP RLHD+PI+ DYS RATTG AT TVDF A+HTQWD + P+ VER K+L+ GQHY+VGLEL MPTSY+NR++GVFMVHTTL+D+QD+ LA+SARPAMLPHTS+L KG+ M+FAWPL+L GL++E ETI V CID+Y+ + LH PL+K +VTVSSGRVQ Y
Sbjct: 15 GLQYLLLFEAVLLSAVVLYGALYWLVMPLRLHDKPIFLDYSDRATTGSATGTVDFLARHTQWDPS--PLTNVERLNTKVLKAGQHYKVGLELQMPTSYINRRIGVFMVHTTLLDEQDNELASSARPAMLPHTSALRKGVGMMFAWPLHLAGLRREEETIYVDCIDYYEENALH-------PLTKARVTVSSGRVQFY 202
BLAST of mRNA_H-elongata_contig75145.15194.1 vs. uniprot
Match: A0A6H5JEL4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEL4_9PHAE) HSP 1 Score: 262 bits (670), Expect = 6.670e-81 Identity = 132/197 (67.01%), Postives = 161/197 (81.73%), Query Frame = 1
Query: 1 GLQYLLIFGALLLSAIIIYGALYCVVMPQRLHDRPIYFDYSSRATTGGATATVDFQAQHTQWDLALLPIPIVERPRKKLLRPGQHYEVGLELLMPTSYVNRKVGVFMVHTTLMDDQDSVLATSARPAMLPHTSSLLKGLTMLFAWPLYLLGLKKEAETISVSCIDFYKASHLHCASRHRHPLSKVKVTVSSGRVQLY 591
GLQYLL+F A+LLSA+I+YGALY +VMP RLHD+PI+ DYS RATTGGAT TVDF A+HTQWD + P+ VER K+L GQHY+VGLEL MPTSY+NR+VGVFMVHTTL+D+QD+ LA+SARPAMLPHTS+L KG+ M+FAWPL+L GL++E ETI V CID+Y+ + LH PL+K +VTVSSGRVQ Y
Sbjct: 95 GLQYLLLFEAVLLSAVILYGALYWLVMPLRLHDKPIFLDYSDRATTGGATGTVDFLARHTQWDPS--PLTNVERLNTKVLNAGQHYKVGLELQMPTSYINRRVGVFMVHTTLLDEQDNELASSARPAMLPHTSALRKGVGMMFAWPLHLAGLRREEETIYVDCIDYYEENALH-------PLTKARVTVSSGRVQFY 282
BLAST of mRNA_H-elongata_contig75145.15194.1 vs. uniprot
Match: A0A8K1C7V7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C7V7_PYTOL) HSP 1 Score: 107 bits (267), Expect = 3.930e-24 Identity = 69/207 (33.33%), Postives = 115/207 (55.56%), Query Frame = 1
Query: 7 QYLLIFGALLLSAIIIYGALYCVVMPQRLHDRPIYFDYSSRATTGGA-----------TATVDFQAQHTQWDLALLPIPIVERPRKKLLRPGQHYEVGLELLMPTSYVNRKVGVFMVHTTLMDDQDSVLATSARPAMLPHTSSLLKGLTMLFAWPL-YLLGLKKEAETISVSCIDFYKASHLHCASRHRHPLSKVKVTVSSGRVQLY 591
Q LL F LL++A I+Y LY +++P RLH++ I+FDY A + TA ++ H QW+ + P+ +E ++L PG Y+V +EL MP S VNR +G+FM+ TTL LA+SAR A++ + SL++ L +F+W + Y L + + ++T+ V ++ +K +HPL+ V + ++ VQ+Y
Sbjct: 56 QVLLGFSVLLVTATILYSVLYYLIIPSRLHEQEIFFDYGDHAALSLSPAARTAAPTLPTAYLNLLKPHHQWEFS--PLVEMEPTDTRVLVPGVKYDVFVELEMPESQVNRDIGMFMLQTTLKSHDGEFLASSARSAIVKDSHSLVE-LVRVFSWLVPYALRVTEPSQTVRVLAVNGFKEGK-------QHPLTSVTLVLNHPAVQIY 252
BLAST of mRNA_H-elongata_contig75145.15194.1 vs. uniprot
Match: A0A7S1TVB1_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TVB1_9STRA) HSP 1 Score: 106 bits (265), Expect = 1.610e-23 Identity = 69/216 (31.94%), Postives = 107/216 (49.54%), Query Frame = 1
Query: 7 QYLLIFGALLLSAIIIYGALYCVVMPQRLHDRPIYFDYSSRATTGGATATVDFQAQHTQWDLALLPIPIVERP---------------------RKKLLRPGQHYEVGLELLMPTSYVNRKVGVFMVHTTLMDDQDSVLATSARPAMLPHTSSLLKGLTMLFAWPLYLLGLKKEAETISVSCIDFYKASHLHCASRHRHPLSKVKVTVSSGRVQLY 591
Q +L+ LLLSA +Y +Y ++MP RLH +P+Y DY T T VDF A TQW + +P + RK++L+ Q Y + ++L MP S N + G FM+ L+D+ D+ +ATS RPA + + SSLL+ L +L P L + E++ + + D H + P +K +VT+SS V++Y
Sbjct: 51 QAMLLAIGLLLSATFVYTCIYTLIMPSRLHHQPVYLDY----TADRPTTVVDFLAAETQWAFSETCVPPPSKDVSKESTPPPSSLFSWGSSTPKRKRMLKQRQKYSISVDLEMPESAHNEEAGNFMLEVQLLDEYDTPIATSRRPATIKYKSSLLQKLRVLVLAPFLLGDVLSESQHLYLQMFD-------HFEEQQHMPFTKARVTLSSRDVRVY 255
BLAST of mRNA_H-elongata_contig75145.15194.1 vs. uniprot
Match: W7TBE7_9STRA (Bernardinelli-seip congenital lipodystrophy 2 protein variant 2 n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TBE7_9STRA) HSP 1 Score: 102 bits (254), Expect = 6.560e-22 Identity = 71/220 (32.27%), Postives = 110/220 (50.00%), Query Frame = 1
Query: 4 LQYLLIFGALLLSAIIIYGALYCVVMPQRLHDRPIYFDYSSRA------TTGGAT----------------ATVDFQAQHTQWDLALLPIPIV--ERPRKKLLRPGQHYEVGLELLMPTSYVNRKVGVFMVHTTLMDDQDSVLATSARPAMLPHTSSLLKGLTMLFAWPLYLLGLKKEAETISVSCIDFYKASHLHCASRHRHPLSKVKVTVSSGRVQLY 591
LQYL + AL+ SA +Y Y ++MP +LH++ ++FDY A T G + A +DF +QH QW LP P+ E P ++LRP + Y + +E+ +P S N +G FM+ L D +LA SARP +L + S ++ L P+ LG +EA+ + V+ D ++ S H PL+ +V +SS R+ LY
Sbjct: 46 LQYLFLGLALITSATALYTVAYQLIMPTKLHEKELFFDYFPPANPLDPSTCPGLSPSPPSFPPSSPSPYPHAHIDFLSQHNQW----LPSPLTKTEPPLDRILRPERVYVIDVEVTVPDSETNAMLGNFMLFVDLFTKDDDLLAHSARPLILTYRSPWIRFFRSLLLAPVLALGFAQEAQVLRVTFFDRFRESLAH-------PLAHARVRLSSPRLHLY 254
BLAST of mRNA_H-elongata_contig75145.15194.1 vs. uniprot
Match: A0A2D4BPB8_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BPB8_PYTIN) HSP 1 Score: 94.7 bits (234), Expect = 1.890e-19 Identity = 64/200 (32.00%), Postives = 102/200 (51.00%), Query Frame = 1
Query: 25 GALLLSAIIIYGALYCVVMPQRLHDRPIYFDYSSRATTGGA----------TATVDFQAQHTQWDLALLPIPIVERPRKKLLRPGQHYEVGLELLMPTSYVNRKVGVFMVHTTLMDDQDSVLATSARPAMLPHTSSLLKGLTMLFAWPL-YLLGLKKEAETISVSCIDFYKASHLHCASRHRHPLSKVKVTVSSGRVQLY 591
L +A ++Y ALY V+MP RLH++ ++FDY + A + TA +D QW + L P +L P Y+V +EL +P S NR +G+FM++TTL + VLA SARP ++ + ++ L AW + Y L + + +T+SV I ++ S HPL+ V VT++ +Q+Y
Sbjct: 57 SVLFATATVLYSALYYVIMPSRLHEQQVFFDYGTHAALSLSDPRAFPLTLPTARLDLLNAEQQWTASALAYPS-RSTAASVLVPDVTYDVIVELTVPESATNRAIGMFMMNTTLSTHDERVLAASARPVIVKDSHLAVQWARAL-AWLVPYALRVTEPTQTLSVLVIXGFRESK-------EHPLTGVTVTLNHPAIQIY 247
BLAST of mRNA_H-elongata_contig75145.15194.1 vs. uniprot
Match: A0A5D6YCZ6_9STRA (Non-specific serine/threonine protein kinase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YCZ6_9STRA) HSP 1 Score: 94.4 bits (233), Expect = 5.710e-19 Identity = 65/201 (32.34%), Postives = 108/201 (53.73%), Query Frame = 1
Query: 31 LLLSAIIIYGALYCVVMPQRLHDRPIYFDYSSRATTGG---------ATATVDFQAQHTQWDLALLPIPIVERPRKK--LLRPGQHYEVGLELLMPTSYVNRKVGVFMVHTTLMDDQDSVLATSARPAMLPHTSSLLKGL---TMLFAWPLYLLGLKKEAETISVSCIDFYKASHLHCASRHRHPLSKVKVTVSSGRVQLY 591
L ++A ++Y +Y +V+P RLH++ I+FDY A TAT++ QWD + P+V+ P + +L PG Y+V +EL +P S N ++G+FMV TTL + VLA SARPA++ +L++ L M F+ + LGL + ++ + + I+ + S H PL+ V V ++ +VQ+Y
Sbjct: 64 LFVTATVLYSIVYYLVIPARLHEQEIFFDYGDHAALAKHGLPARFTLPTATLNLLDAEHQWDAS----PLVQLPTRAPPVLVPGVTYDVFIELTVPESRANVEIGMFMVSTTLKSFESEVLAASARPAIVHEAHALVRWLRVGAMAFS---HALGLTEPSQLLHILAINGLQESKTH-------PLTTVVVRLNHPQVQVY 250
BLAST of mRNA_H-elongata_contig75145.15194.1 vs. uniprot
Match: K3WY91_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WY91_GLOUD) HSP 1 Score: 92.8 bits (229), Expect = 7.820e-19 Identity = 62/193 (32.12%), Postives = 105/193 (54.40%), Query Frame = 1
Query: 40 SAIIIYGALYCVVMPQRLHDRPIYFDYSSRATTGGATATVDFQAQHTQWDLALL-PI------PIVERPR--KKLLRPGQHYEVGLELLMPTSYVNRKVGVFMVHTTLMDDQDSVLATSARPAMLPHTSSLLKGLTMLFAWPLYLLGLKKEAETISVSCIDFYKASHLHCASRHRHPLSKVKVTVSSGRVQLY 591
+A I+Y LY +V+P RLH++ I+FDY + A+ + + Q L LL P+ P+V+ P +++L PG Y++ +EL +P S VN +G+FMV TTL LA+SAR A++ + SL++ + + L+ LGL + A+ + V I+ S H PL+ ++T++ +Q+Y
Sbjct: 66 TATILYSLLYYLVIPSRLHEQEIFFDYGNHASLVAEGSGLGHQLTLPTAKLNLLDPVHQWNASPVVKLPAHPQQVLVPGVKYDIYIELTVPESRVNADIGMFMVSTTLKSTDGQYLASSARSAIVHDSHSLVRWIRVGALAVLHALGLTEPAQVLDVLAINGIMESKTH-------PLTTAEITLNHPAIQIY 251
BLAST of mRNA_H-elongata_contig75145.15194.1 vs. uniprot
Match: A0A0P1AKY1_PLAHL (Uncharacterized conserved protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AKY1_PLAHL) HSP 1 Score: 87.4 bits (215), Expect = 7.850e-17 Identity = 62/196 (31.63%), Postives = 103/196 (52.55%), Query Frame = 1
Query: 31 LLLSAIIIYGALYCVVMPQRLHDRPIYFDYS------SRATTGGAT---ATVDFQAQHTQWDLALLPIPIVERPRKKLLRPGQHYEVGLELLMPTSYVNRKVGVFMVHTTLMDDQDSVLATSARPAMLPHTSSLLKGLTMLFAWPLYLLGLKKEAETISVSCIDFYKASHLHCASRHRHPLSKVKVTVSSGRVQLY 591
L + A + Y LY +V+P R H++ I+F Y ++ T T A+++ + QW I ++ + +L PG Y+V +EL++P S N VG+FMV TTL +DQ+ LATSARP L ++ L + F Y LG + A+T+ V+ I+ Y+ S PL++V + +++ +Q+Y
Sbjct: 65 LFIMASLFYAVLYFLVIPSRFHEQDIFFHYGVHHKDMNKYMTFMPTVPKASLNLLDPNHQWQSL---ISTHKKTTQPVLVPGVKYDVIVELIVPESRTNVDVGMFMVSTTLFNDQEKELATSARPVTLHDMPLPVRWLKLAFWVVPYTLGFSEPAQTLRVTMINGYEESV-------EFPLTRVDIELNTPELQVY 250
BLAST of mRNA_H-elongata_contig75145.15194.1 vs. uniprot
Match: A0A024GC99_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GC99_9STRA) HSP 1 Score: 85.9 bits (211), Expect = 2.530e-16 Identity = 65/208 (31.25%), Postives = 104/208 (50.00%), Query Frame = 1
Query: 4 LQYLLIFGALLLSAIIIYGALYCVVMPQRLHDRPIYFDYSSRA----------TTGGATATVDFQAQHTQWDLALLPIPIVERPRKKLLRPGQHYEVGLELLMPTSYVNRKVGVFMVHTTLMDDQDSV-LATSARPAMLPHTSSLLKGLTMLFAWPL-YLLGLKKEAETISVSCIDFYKASHLHCASRHRHPLSKVKVTVSSGRVQLY 591
LQ+ G L SA +IY +Y ++MP R HD+ IYFDY + A TA +D H W V+ +K LL G Y++ +EL +P S VN K+G+FM++T + + LA+SARP ++ T+SL++ L W +LL L + + I V + Y+ + + PL+ VK+ ++ +Q+Y
Sbjct: 54 LQFCTALGLLFASAALIYALMYHLIMPTRCHDQEIYFDYGNHAHLVRDYDRKLNLTLPTAKLDLLEPHRHWKSHTE----VDARKKGLLVAGVKYDLFVELNVPESSVNYKIGMFMIYTHVQTAGGKMTLASSARPVIVRETNSLIR-LVQRGVWFFPHLLSLSEPTQRIWVPVMIGYEENK-------KSPLTNVKIVLNHPEIQIY 249 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig75145.15194.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig75145.15194.1 >prot_H-elongata_contig75145.15194.1 ID=prot_H-elongata_contig75145.15194.1|Name=mRNA_H-elongata_contig75145.15194.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=197bp GLQYLLIFGALLLSAIIIYGALYCVVMPQRLHDRPIYFDYSSRATTGGATback to top mRNA from alignment at H-elongata_contig75145:196..3050+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig75145.15194.1 ID=mRNA_H-elongata_contig75145.15194.1|Name=mRNA_H-elongata_contig75145.15194.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2855bp|location=Sequence derived from alignment at H-elongata_contig75145:196..3050+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig75145:196..3050+ >mRNA_H-elongata_contig75145.15194.1 ID=mRNA_H-elongata_contig75145.15194.1|Name=mRNA_H-elongata_contig75145.15194.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1182bp|location=Sequence derived from alignment at H-elongata_contig75145:196..3050+ (Himanthalia elongata Himel1 dioecious)back to top |