mRNA_H-elongata_contig74596.15138.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig74596.15138.1 vs. uniprot
Match: A0A6H5KSZ4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KSZ4_9PHAE) HSP 1 Score: 97.1 bits (240), Expect = 8.100e-22 Identity = 46/85 (54.12%), Postives = 54/85 (63.53%), Query Frame = 1
Query: 7 GRSYRSKGRRLDNGHPAQIYECNLNCSCHLKSCRNRLVQKGMTCKI-------------EASSEWGVRAVNDIAVGTFICKLAGQ 222
GR Y SKGR LD GHP+QIYECN+NC CH+ CRNRLVQ+GMTC I E +WGV AV I +F+C +AGQ
Sbjct: 341 GRQYSSKGRLLDEGHPSQIYECNVNCRCHVDDCRNRLVQRGMTCNIKVLYLGSSRRRVLEGCGKWGVTAVRKIPARSFVCTVAGQ 425
BLAST of mRNA_H-elongata_contig74596.15138.1 vs. uniprot
Match: A0A2L2YP06_PARTP (Histone-lysine N-methyltransferase EHMT1 (Fragment) n=2 Tax=Parasteatoda tepidariorum TaxID=114398 RepID=A0A2L2YP06_PARTP) HSP 1 Score: 67.0 bits (162), Expect = 8.520e-12 Identity = 29/61 (47.54%), Postives = 39/61 (63.93%), Query Frame = 1
Query: 52 PAQIYECNLNCSCHLKSCRNRLVQKGMTCKIEA----SSEWGVRAVNDIAVGTFICKLAGQ 222
P ++ECN CSC SCRNR+VQ G+TC+++ WGVR + DI GTFIC+ G+
Sbjct: 11 PPMLFECNRACSCWALSCRNRVVQNGITCRLQLIRTRGKGWGVRTLKDIPKGTFICEYVGE 71
BLAST of mRNA_H-elongata_contig74596.15138.1 vs. uniprot
Match: A0A3Q2EEC0_CYPVA (Histone-lysine N-methyltransferase SETMAR n=2 Tax=Cyprinodon TaxID=28741 RepID=A0A3Q2EEC0_CYPVA) HSP 1 Score: 66.6 bits (161), Expect = 2.550e-11 Identity = 34/82 (41.46%), Postives = 52/82 (63.41%), Query Frame = 1
Query: 7 GRSYRSKGR-----RLDNGHPAQIYECNLNCSCHLKSCRNRLVQKGMTCKIEA----SSEWGVRAVNDIAVGTFICKLAGQV 225
G++Y S GR R D+G+ + ++ECN C+C SC NR+VQ+G+ ++E S WGVR + +I GTF+C+ AG+V
Sbjct: 71 GQAYESNGRLLHLNRTDSGYSSPVFECNALCTCG-DSCSNRVVQRGLQLRLEVFHTESKGWGVRTLEEIPRGTFVCEYAGEV 151
BLAST of mRNA_H-elongata_contig74596.15138.1 vs. uniprot
Match: A0A8C5M030_9ANUR (SET domain bifurcated histone lysine methyltransferase 2 n=3 Tax=Leptobrachium leishanense TaxID=445787 RepID=A0A8C5M030_9ANUR) HSP 1 Score: 66.2 bits (160), Expect = 5.770e-11 Identity = 30/71 (42.25%), Postives = 45/71 (63.38%), Query Frame = 1
Query: 25 KGRRLDNGHPAQIYECNLNCSCHLKSCRNRLVQKGMTCKIEA----SSEWGVRAVNDIAVGTFICKLAGQV 225
K +RL + P +YECN+ C C K C+NR+VQ G+ +++ S WGVR ++DI GTF+C AG++
Sbjct: 340 KHKRLRSPIPTGLYECNITCKCDPKMCQNRVVQHGIQVRLQVFKTKSKGWGVRCLDDIDSGTFVCTFAGRI 410
BLAST of mRNA_H-elongata_contig74596.15138.1 vs. uniprot
Match: A0A2H6NA99_MICLE (Uncharacterized protein (Fragment) n=1 Tax=Micrurus lemniscatus carvalhoi TaxID=129465 RepID=A0A2H6NA99_MICLE) HSP 1 Score: 65.9 bits (159), Expect = 7.130e-11 Identity = 32/78 (41.03%), Postives = 49/78 (62.82%), Query Frame = 1
Query: 1 RDGRSYRSKGRRLDNGHPAQIYECNLNCSCHLKSCRNRLVQKGMTCKIEASSE----WGVRAVNDIAVGTFICKLAGQ 222
++G S+ G+RL+ + +YEC+L CSC C+NRLVQ G+ +++ S WGVR ++DI GTF+C AG+
Sbjct: 279 KNGPSHGYTGKRLEEPISSGVYECSLLCSCDKNMCQNRLVQHGLQVRLQVFSTEKKGWGVRCLDDIDKGTFVCTYAGK 356
BLAST of mRNA_H-elongata_contig74596.15138.1 vs. uniprot
Match: A0A4Y2IW83_ARAVE (Histone-lysine N-methyltransferase EHMT1 n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2IW83_ARAVE) HSP 1 Score: 65.9 bits (159), Expect = 7.860e-11 Identity = 28/61 (45.90%), Postives = 39/61 (63.93%), Query Frame = 1
Query: 52 PAQIYECNLNCSCHLKSCRNRLVQKGMTCKIEA----SSEWGVRAVNDIAVGTFICKLAGQ 222
P ++ECN CSC +CRNR++Q GMTC+++ WGVR + DI GTFIC+ G+
Sbjct: 441 PPMLFECNRACSCWSLNCRNRVLQSGMTCRLQLIRTKGKGWGVRTLKDIPKGTFICEYVGE 501
BLAST of mRNA_H-elongata_contig74596.15138.1 vs. uniprot
Match: B2GRL9_DANRE (Setdb1b protein n=1 Tax=Danio rerio TaxID=7955 RepID=B2GRL9_DANRE) HSP 1 Score: 65.9 bits (159), Expect = 7.950e-11 Identity = 29/69 (42.03%), Postives = 45/69 (65.22%), Query Frame = 1
Query: 31 RRLDNGHPAQIYECNLNCSCHLKSCRNRLVQKGMTCKIEA----SSEWGVRAVNDIAVGTFICKLAGQV 225
+RLD P IYECN C C+++ C NRLVQ G+ +++ + WG+R ++DIA G+F+C AG++
Sbjct: 769 KRLDECLPTGIYECNKRCRCNMQMCTNRLVQHGLQVRLQLFKTQNKGWGIRCLDDIAKGSFVCIYAGKI 837
BLAST of mRNA_H-elongata_contig74596.15138.1 vs. uniprot
Match: STB1B_DANRE (Histone-lysine N-methyltransferase SETDB1-B n=8 Tax=Danio rerio TaxID=7955 RepID=STB1B_DANRE) HSP 1 Score: 65.9 bits (159), Expect = 8.010e-11 Identity = 29/69 (42.03%), Postives = 45/69 (65.22%), Query Frame = 1
Query: 31 RRLDNGHPAQIYECNLNCSCHLKSCRNRLVQKGMTCKIEA----SSEWGVRAVNDIAVGTFICKLAGQV 225
+RLD P IYECN C C+++ C NRLVQ G+ +++ + WG+R ++DIA G+F+C AG++
Sbjct: 769 KRLDECLPTGIYECNKRCRCNMQMCTNRLVQHGLQVRLQLFKTQNKGWGIRCLDDIAKGSFVCIYAGKI 837
BLAST of mRNA_H-elongata_contig74596.15138.1 vs. uniprot
Match: A0A6P7WTI9_9AMPH (histone-lysine N-methyltransferase SETDB1 isoform X1 n=4 Tax=Microcaecilia unicolor TaxID=1415580 RepID=A0A6P7WTI9_9AMPH) HSP 1 Score: 65.9 bits (159), Expect = 8.020e-11 Identity = 29/69 (42.03%), Postives = 44/69 (63.77%), Query Frame = 1
Query: 31 RRLDNGHPAQIYECNLNCSCHLKSCRNRLVQKGMTCKIEA----SSEWGVRAVNDIAVGTFICKLAGQV 225
+RLD P +YECN C C+L C NRLVQ G+ +++ + WG+R ++DIA G+F+C AG++
Sbjct: 778 KRLDECMPTGVYECNKRCKCNLVMCTNRLVQHGLQVRLQLFKTQNKGWGIRCLDDIAKGSFVCIYAGKI 846
BLAST of mRNA_H-elongata_contig74596.15138.1 vs. uniprot
Match: UPI001ABE5D53 (histone-lysine N-methyltransferase SETDB1 isoform X1 n=4 Tax=Bufo bufo TaxID=8384 RepID=UPI001ABE5D53) HSP 1 Score: 65.9 bits (159), Expect = 8.020e-11 Identity = 29/69 (42.03%), Postives = 44/69 (63.77%), Query Frame = 1
Query: 31 RRLDNGHPAQIYECNLNCSCHLKSCRNRLVQKGMTCKIEA----SSEWGVRAVNDIAVGTFICKLAGQV 225
+RLD P +YECN C C+L C NRLVQ G+ +++ + WG+R ++DIA G+F+C AG++
Sbjct: 819 KRLDECLPTGVYECNKRCKCNLNLCSNRLVQHGLQVRLQLFKTQNKGWGIRCLDDIAKGSFVCIYAGKI 887 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig74596.15138.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig74596.15138.1 >prot_H-elongata_contig74596.15138.1 ID=prot_H-elongata_contig74596.15138.1|Name=mRNA_H-elongata_contig74596.15138.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=75bp RDGRSYRSKGRRLDNGHPAQIYECNLNCSCHLKSCRNRLVQKGMTCKIEAback to top mRNA from alignment at H-elongata_contig74596:200..849- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig74596.15138.1 ID=mRNA_H-elongata_contig74596.15138.1|Name=mRNA_H-elongata_contig74596.15138.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=650bp|location=Sequence derived from alignment at H-elongata_contig74596:200..849- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig74596:200..849- >mRNA_H-elongata_contig74596.15138.1 ID=mRNA_H-elongata_contig74596.15138.1|Name=mRNA_H-elongata_contig74596.15138.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=450bp|location=Sequence derived from alignment at H-elongata_contig74596:200..849- (Himanthalia elongata Himel1 dioecious)back to top |