mRNA_H-elongata_contig74200.15112.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig74200.15112.1 vs. uniprot
Match: D7FUV4_ECTSI (Kinesin motor domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUV4_ECTSI) HSP 1 Score: 293 bits (750), Expect = 7.510e-91 Identity = 147/181 (81.22%), Postives = 163/181 (90.06%), Query Frame = 1
Query: 1 ARAQGELDVVRHRLEALSREKDNVVVGASTKIEELEAKVLEGEAQRRKMHNLIQELRGNVRVFARVRPFLPSDNVSEDAKPVVVGKGNGGGCMVSKRIIGDNGKDFGMDVQSFAFDKCFPPSAGQEEVFDEVSEFVQSALDGFNVCLFSYGQTGSGKTHTMQGSGAGTMRGIIPRAMEQVR 543
+RAQGEL+V+R RLEALS+EK+NV +GAS K+EELEAKVLEGE QRRKMHNLIQELRGNVRVFARVRPFLPSD V + P VVGKG+G GC++SKR+IGDNGK+ + QSF+FDKCFPPSAGQEEVF EVSEFVQSALDGFNVCLFSYGQTGSGKTHTMQGSGAG MRG+IPRAMEQ R
Sbjct: 744 SRAQGELEVLRRRLEALSKEKENVAIGASAKVEELEAKVLEGELQRRKMHNLIQELRGNVRVFARVRPFLPSDGVGPEEVPAVVGKGDGVGCVLSKRLIGDNGKELPPEAQSFSFDKCFPPSAGQEEVFTEVSEFVQSALDGFNVCLFSYGQTGSGKTHTMQGSGAGDMRGMIPRAMEQER 924
BLAST of mRNA_H-elongata_contig74200.15112.1 vs. uniprot
Match: A0A6H5JJH6_9PHAE (Kinesin motor domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJH6_9PHAE) HSP 1 Score: 293 bits (751), Expect = 2.920e-89 Identity = 147/180 (81.67%), Postives = 163/180 (90.56%), Query Frame = 1
Query: 1 ARAQGELDVVRHRLEALSREKDNVVVGASTKIEELEAKVLEGEAQRRKMHNLIQELRGNVRVFARVRPFLPSDNVSEDAKPVVVGKGNGGGCMVSKRIIGDNGKDFGMDVQSFAFDKCFPPSAGQEEVFDEVSEFVQSALDGFNVCLFSYGQTGSGKTHTMQGSGAGTMRGIIPRAMEQV 540
+RAQGEL+V+R RLEALS+EK+NV +GAS K+EELEAKVLEGE QRRKMHNLIQELRGNVRVFARVRPFLPSD V + P VVGKG+G GC++SKR+IGDNGK+ + QSF+FDKCFPPSAGQEEVF EVSEFVQSALDGFNVCLFSYGQTGSGKTHTMQGSGAG MRG+IPRAMEQV
Sbjct: 872 SRAQGELEVLRRRLEALSKEKENVAIGASAKVEELEAKVLEGELQRRKMHNLIQELRGNVRVFARVRPFLPSDGVGPEEVPAVVGKGDGVGCVLSKRLIGDNGKELPPEAQSFSFDKCFPPSAGQEEVFTEVSEFVQSALDGFNVCLFSYGQTGSGKTHTMQGSGAGDMRGMIPRAMEQV 1051
BLAST of mRNA_H-elongata_contig74200.15112.1 vs. uniprot
Match: A0A835YR54_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR54_9STRA) HSP 1 Score: 208 bits (529), Expect = 1.570e-61 Identity = 109/179 (60.89%), Postives = 130/179 (72.63%), Query Frame = 1
Query: 13 GELDVVRHRLEALSREKDNVVVGASTKIEELEAKVLEGEAQRRKMHNLIQELRGNVRVFARVRPFLPSDNVSEDAKPVVVGKGNGGGCMVSKRII---GDNGKDFGMDVQSFAFDKCFPPSAGQEEVFDEVSEFVQSALDGFNVCLFSYGQTGSGKTHTMQGSGAGTMRGIIPRAMEQV 540
G+LD+ R RL AL ++ + + EL+ KV +GE QRRK+HNL+QELRGNVRV+ARVRPFLP D A P + +G+G C++ KR GD G + +FAFD+ FPPSAGQE VF EVSEFVQSALDG+NVCLFSYGQTGSGKTHT+ GSGAG MRGIIPRAMEQV
Sbjct: 94 GDLDIARVRLAALEADRLSERQRLEAAVAELDGKVRDGEVQRRKLHNLVQELRGNVRVYARVRPFLPDDQAPAGAAPAISARGDGVSCVIVKRDAQRGGDGGSGAVVKTDTFAFDRVFPPSAGQEAVFAEVSEFVQSALDGYNVCLFSYGQTGSGKTHTVVGSGAGPMRGIIPRAMEQV 272
BLAST of mRNA_H-elongata_contig74200.15112.1 vs. uniprot
Match: A0A7S4JBW0_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JBW0_9STRA) HSP 1 Score: 207 bits (526), Expect = 1.660e-58 Identity = 110/176 (62.50%), Postives = 136/176 (77.27%), Query Frame = 1
Query: 13 GELDVVRHRLEALSREKDNVVVGASTKIEELEAKVLEGEAQRRKMHNLIQELRGNVRVFARVRPFLPSDNVSEDAKPVVVGKGNGGGCMVSKRIIGDNGKDFGMDVQSFAFDKCFPPSAGQEEVFDEVSEFVQSALDGFNVCLFSYGQTGSGKTHTMQGSGAGTMRGIIPRAMEQV 540
GE++V++ RL+A ++ V V + K+ LEA + EG+A+RR+MHNLIQELRGNVRVFARVRPFLP+D VS+DA+P VV K K D+G+++ SF+FD+ FPPS GQE VFDEVSE VQSALDG+NVCLFSYGQTGSGKTHTMQGSG+G MRGIIPR++EQV
Sbjct: 902 GEINVLKERLKAEEQKSKFVSVAGAEKVAALEATIREGQAERRRMHNLIQELRGNVRVFARVRPFLPNDGVSDDAEPFVVPKSESS----LKLKKSDDGQEY-----SFSFDRVFPPSVGQEAVFDEVSELVQSALDGYNVCLFSYGQTGSGKTHTMQGSGSGAMRGIIPRSIEQV 1068
BLAST of mRNA_H-elongata_contig74200.15112.1 vs. uniprot
Match: A0A7S4VFE5_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VFE5_9STRA) HSP 1 Score: 196 bits (498), Expect = 7.560e-57 Identity = 105/179 (58.66%), Postives = 131/179 (73.18%), Query Frame = 1
Query: 4 RAQGELDVVRHRLEALSREKDNVVVGASTKIEELEAKVLEGEAQRRKMHNLIQELRGNVRVFARVRPFLPSDNVSEDAKPVVVGKGNGGGCMVSKRIIGDNGKDFGMDVQSFAFDKCFPPSAGQEEVFDEVSEFVQSALDGFNVCLFSYGQTGSGKTHTMQGSGAGTMRGIIPRAMEQV 540
R GE++V++ RL+A S + ++ + ++ LEA++ EG+A+RR+MHN+IQELRGNVRVFARVRPFLP D V DA+P + K N ++SK D F FD+ FPPS GQ+ VFDEVSEFVQSALDG++VCLFSYGQTGSGKTHTMQGSG G MRGIIPRA+EQV
Sbjct: 353 RLNGEINVLKERLKAESEKSMSLGQATAEQVAALEAQIREGQAERRRMHNVIQELRGNVRVFARVRPFLPGDGVGGDAQPCITPK-NETSLVLSKG-----------DEYPFTFDRVFPPSVGQQSVFDEVSEFVQSALDGYSVCLFSYGQTGSGKTHTMQGSGVGQMRGIIPRAIEQV 519
BLAST of mRNA_H-elongata_contig74200.15112.1 vs. uniprot
Match: A0A7S3HL69_9STRA (Kinesin-like protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HL69_9STRA) HSP 1 Score: 191 bits (485), Expect = 1.550e-55 Identity = 102/182 (56.04%), Postives = 132/182 (72.53%), Query Frame = 1
Query: 1 ARAQGELDVVRHRLEALSREKDNVVVGASTKIEELEAKVLEGEAQRRKMHNLIQELRGNVRVFARVRPFLPSD--NVSEDAKPVVVGKGNGGGCMVSKRIIGDNGKDFGMDVQSFAFDKCFPPSAGQEEVFDEVSEFVQSALDGFNVCLFSYGQTGSGKTHTMQGSGAGTMRGIIPRAMEQV 540
+R GEL+V+R RL L+ ++N + + KI E E K+ GE QRRK+HNL+QELRGNVRVFARVRPFLP+D ++++ P + +G+ + K + ++ +F+FDK F PS QE +F+EVSEFVQSALDG+NVCLFSYGQTGSGKTHTMQGSG G+MRG+IPRAMEQV
Sbjct: 19 SRVTGELEVMRRRLGELTASQENQSMSEAKKIAEYEDKLRAGEVQRRKLHNLVQELRGNVRVFARVRPFLPNDGLDMTKLPDPTITARGDMNSLRIYKAPATSEER---VEDHNFSFDKVFGPSVSQEALFEEVSEFVQSALDGYNVCLFSYGQTGSGKTHTMQGSGNGSMRGVIPRAMEQV 197
BLAST of mRNA_H-elongata_contig74200.15112.1 vs. uniprot
Match: A0A4D9D7S4_9STRA (Kinesin motor domain-containing protein n=5 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D7S4_9STRA) HSP 1 Score: 198 bits (503), Expect = 1.900e-55 Identity = 106/180 (58.89%), Postives = 128/180 (71.11%), Query Frame = 1
Query: 1 ARAQGELDVVRHRLEALSREKDNVVVGASTKIEELEAKVLEGEAQRRKMHNLIQELRGNVRVFARVRPFLPSDNVSEDAKPVVVGKGNGGGCMVSKRIIGDNGKDFGMDVQSFAFDKCFPPSAGQEEVFDEVSEFVQSALDGFNVCLFSYGQTGSGKTHTMQGSGAGTMRGIIPRAMEQV 540
A+ GE +V+RHRL R+++ ++ +LE V EGE QRRKMHNLIQELRGNVRV+ARVRPFLPSD V A+ + + + K+ +G ++ F FD+CFPPSAGQE VF EVSEFVQSALDG+NVCLFSYGQTGSGKTHTMQG G+G M+GIIPRAMEQV
Sbjct: 664 AQISGEAEVLRHRLLEADRDREMGAEKYRQQVSDLEKAVQEGELQRRKMHNLIQELRGNVRVYARVRPFLPSDQVDASAQHCINVSAHDDSLAILKKDGSSDGNV--LESHGFTFDRCFPPSAGQEVVFAEVSEFVQSALDGYNVCLFSYGQTGSGKTHTMQGFGSGPMKGIIPRAMEQV 841
BLAST of mRNA_H-elongata_contig74200.15112.1 vs. uniprot
Match: A0A7S4V4X5_9STRA (Kinesin-like protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4V4X5_9STRA) HSP 1 Score: 196 bits (498), Expect = 2.170e-55 Identity = 105/179 (58.66%), Postives = 131/179 (73.18%), Query Frame = 1
Query: 4 RAQGELDVVRHRLEALSREKDNVVVGASTKIEELEAKVLEGEAQRRKMHNLIQELRGNVRVFARVRPFLPSDNVSEDAKPVVVGKGNGGGCMVSKRIIGDNGKDFGMDVQSFAFDKCFPPSAGQEEVFDEVSEFVQSALDGFNVCLFSYGQTGSGKTHTMQGSGAGTMRGIIPRAMEQV 540
R GE++V++ RL+A S + ++ + ++ LEA++ EG+A+RR+MHN+IQELRGNVRVFARVRPFLP D V DA+P + K N ++SK D F FD+ FPPS GQ+ VFDEVSEFVQSALDG++VCLFSYGQTGSGKTHTMQGSG G MRGIIPRA+EQV
Sbjct: 353 RLNGEINVLKERLKAESEKSMSLGQATAEQVAALEAQIREGQAERRRMHNVIQELRGNVRVFARVRPFLPGDGVGGDAQPCITPK-NETSLVLSKG-----------DEYPFTFDRVFPPSVGQQSVFDEVSEFVQSALDGYSVCLFSYGQTGSGKTHTMQGSGVGQMRGIIPRAIEQV 519
BLAST of mRNA_H-elongata_contig74200.15112.1 vs. uniprot
Match: A0A7S4S9M0_9STRA (Kinesin-like protein (Fragment) n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4S9M0_9STRA) HSP 1 Score: 187 bits (475), Expect = 2.770e-52 Identity = 100/180 (55.56%), Postives = 125/180 (69.44%), Query Frame = 1
Query: 1 ARAQGELDVVRHRLEALSREKDNVVVGASTKIEELEAKVLEGEAQRRKMHNLIQELRGNVRVFARVRPFLPSDNVSEDAKPVVVGKGNGGGCMVSKRIIGDNGKDFGMDVQSFAFDKCFPPSAGQEEVFDEVSEFVQSALDGFNVCLFSYGQTGSGKTHTMQGSGAGTMRGIIPRAMEQV 540
+R +GE+ R RL+ N K++ELE ++L+G A+RR++HN+IQELRGNVRVFAR+RPFLP DNV +D +P + K + R+ D +F FD FPPSAGQE VF+E SEF+QSALDG+NVCLFSYGQTGSGKTHTMQGSG G MRGIIPR++EQV
Sbjct: 230 SRLKGEIGAFRERLKMEEIRFVNAKRQYGQKVKELEEEILKGNAERRRLHNVIQELRGNVRVFARIRPFLPGDNVDDDTRPCITHKSE---KSLKLRMSEDEPWQ-----HNFTFDAVFPPSAGQEAVFNEASEFIQSALDGYNVCLFSYGQTGSGKTHTMQGSGVGQMRGIIPRSIEQV 401
BLAST of mRNA_H-elongata_contig74200.15112.1 vs. uniprot
Match: A0A7S2A040_9STRA (Hypothetical protein (Fragment) n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2A040_9STRA) HSP 1 Score: 187 bits (475), Expect = 1.200e-51 Identity = 100/180 (55.56%), Postives = 125/180 (69.44%), Query Frame = 1
Query: 1 ARAQGELDVVRHRLEALSREKDNVVVGASTKIEELEAKVLEGEAQRRKMHNLIQELRGNVRVFARVRPFLPSDNVSEDAKPVVVGKGNGGGCMVSKRIIGDNGKDFGMDVQSFAFDKCFPPSAGQEEVFDEVSEFVQSALDGFNVCLFSYGQTGSGKTHTMQGSGAGTMRGIIPRAMEQV 540
+R +GE+ R RL+ N K++ELE ++L+G A+RR++HN+IQELRGNVRVFAR+RPFLP DNV +D +P + K + R+ D +F FD FPPSAGQE VF+E SEF+QSALDG+NVCLFSYGQTGSGKTHTMQGSG G MRGIIPR++EQV
Sbjct: 725 SRLKGEIGAFRERLKMEEIRFVNAKRQYGQKVKELEEEILKGNAERRRLHNVIQELRGNVRVFARIRPFLPGDNVDDDTRPCITHKSE---KSLKLRMSEDEPWQ-----HNFTFDAVFPPSAGQEAVFNEASEFIQSALDGYNVCLFSYGQTGSGKTHTMQGSGVGQMRGIIPRSIEQV 896 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig74200.15112.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig74200.15112.1 >prot_H-elongata_contig74200.15112.1 ID=prot_H-elongata_contig74200.15112.1|Name=mRNA_H-elongata_contig74200.15112.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=181bp ARAQGELDVVRHRLEALSREKDNVVVGASTKIEELEAKVLEGEAQRRKMHback to top mRNA from alignment at H-elongata_contig74200:766..3058+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig74200.15112.1 ID=mRNA_H-elongata_contig74200.15112.1|Name=mRNA_H-elongata_contig74200.15112.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2293bp|location=Sequence derived from alignment at H-elongata_contig74200:766..3058+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig74200:766..3058+ >mRNA_H-elongata_contig74200.15112.1 ID=mRNA_H-elongata_contig74200.15112.1|Name=mRNA_H-elongata_contig74200.15112.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1086bp|location=Sequence derived from alignment at H-elongata_contig74200:766..3058+ (Himanthalia elongata Himel1 dioecious)back to top |