mRNA_H-elongata_contig739.15081.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig739.15081.1 vs. uniprot
Match: A0A6H5KBQ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBQ8_9PHAE) HSP 1 Score: 436 bits (1122), Expect = 2.380e-133 Identity = 213/293 (72.70%), Postives = 241/293 (82.25%), Query Frame = 2
Query: 257 TNFVDVSGPSSDQDHPSSLHYRSYSWEASHPPPQVLQGFKLHYVALDQGSWLEVRDEHHRYGKNLRLYFKEWDRQGNPGGSFFDWLSTPEVQLEVCPRHELERHVVHYCRPEERGKYALRLDVTAEGRAMLHTAKGEAVNSGPNAWLFVLRDGTIFATDKKTDPPRFHHSSFFGGGCVEAAGLLVAENGVLVTLYPHSGHYRPTNSHLQRFLRFLKGLGVDLSAIQVDAQRVHKVARPDKRTER-RVRKMDNPFMVSGMYLLDYFDTKHKAWASSLFVDVRQKARERDDRLHR 1132
T+ + SG SD++H S+L Y YS EAS PPPQVLQG+K++ VALD+ SWLEVRD+ HRYGKNLRLYFKEWDR+G PGGSFF WLS EVQLE CPRHELE VVHYCRPEER YALRLDVT EGRA+LHTA+GE VN GP+AWLFVLRD T+FAT KKTDPPRFHHSSFFGGG VEAAG+LVAE GVL TLYPHSGHYRPTN HL+ L+FL GLGVDL A++VDAQRVHKVARPDKR RVRKMDNPFMVS YLLD+F+ K+ AW+S F ++ K ER +RLH+
Sbjct: 258 TDLLGCSGAPSDREHSSTL-YHQYSNEASAPPPQVLQGWKMNCVALDKRSWLEVRDKQHRYGKNLRLYFKEWDRRGKPGGSFFKWLSAAEVQLEGCPRHELESDVVHYCRPEERHNYALRLDVTPEGRAILHTAQGEPVNCGPSAWLFVLRDQTLFATGKKTDPPRFHHSSFFGGGYVEAAGMLVAEEGVLKTLYPHSGHYRPTNQHLRVLLKFLNGLGVDLDALEVDAQRVHKVARPDKRASYPRVRKMDNPFMVSARYLLDFFEAKYLAWSSCHFDELYLKVNERHERLHQ 549
BLAST of mRNA_H-elongata_contig739.15081.1 vs. uniprot
Match: A0A4D9DCJ4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DCJ4_9STRA) HSP 1 Score: 237 bits (604), Expect = 3.680e-65 Identity = 119/240 (49.58%), Postives = 159/240 (66.25%), Query Frame = 2
Query: 392 LDQGSWLEVRDEHHRYGKNLRLYFKEWDRQGNPGGSFFDWLSTPEVQLEVCPRHELERHVVHYCR-PEERGKYALRLDVTAEGRAMLHTAK---GEAVNSGPNAWLFVLRDGTIFATDKKTD-PPRFHHSSFFGGGCVEAAGLLVAENGVLVTLYPHSGHYRPTNSHLQRFLRFLKGLGVDLSAIQVDAQRVHKVARPDKRTER-RVRKMDNPFMVSGMYLLDYFDTKHKAWASSLFVDV 1093
+D+ +WLEV D HRY KNLRLY+KEWDR+G PG SF+ WL V+LE C R +LE V+YC ++R + ++ D +LH + G+ V +GP+ W+FVLRDG ++A +KKTD PPRFHHSSFF G CV+AAGL VA GVL LYPHSGHYRP++SHL L FL+ VD++ +QVD Q V KVAR T+ R RK+D+P+M +G++ + K AW LF ++
Sbjct: 148 IDRRAWLEVEDRKHRYAKNLRLYYKEWDRRGQPGSSFWSWLDEERVELEECSRAQLEAETVYYCSFTKDREAFEVQFDE----HGLLHQGQAGAGDLVETGPDGWIFVLRDGLVYAHEKKTDQPPRFHHSSFFAGECVQAAGLFVATGGVLERLYPHSGHYRPSDSHLLSLLLFLEAQHVDMAVMQVDVQLVMKVARSHDATKGGRRRKIDSPYMWTGLHAKYFLLAKRYAWDKKLFDEM 383
BLAST of mRNA_H-elongata_contig739.15081.1 vs. uniprot
Match: W7U6C7_9STRA (Calmodulin binding protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U6C7_9STRA) HSP 1 Score: 234 bits (597), Expect = 8.090e-63 Identity = 119/240 (49.58%), Postives = 158/240 (65.83%), Query Frame = 2
Query: 392 LDQGSWLEVRDEHHRYGKNLRLYFKEWDRQGNPGGSFFDWLSTPEVQLEVCPRHELERHVVHYCR-PEERGKYALRLDVTAEGRAMLHTAKGEA---VNSGPNAWLFVLRDGTIFATDKKTD-PPRFHHSSFFGGGCVEAAGLLVAENGVLVTLYPHSGHYRPTNSHLQRFLRFLKGLGVDLSAIQVDAQRVHKVARPDKRTER-RVRKMDNPFMVSGMYLLDYFDTKHKAWASSLFVDV 1093
+D+ +WLEV D HRY KNLRLY+KEWDR+G PG SF+ WL V+LE C R +LE V+YC ++R + ++ D +LH + A V +GP+ W+FVLRDG ++A +KKTD PPRFHHSSFF G CV+AAGL VA GVL LYPHSGHYRP++SHL L FL+ VD++ +QVD Q V KVAR T+ R RK+D+P+M +G++ + K AW LF ++
Sbjct: 272 IDRRAWLEVEDRKHRYAKNLRLYYKEWDRRGQPGSSFWSWLDEERVELEECSRAQLEAETVYYCSFTKDREAFEVQFDE----HGLLHQRQAGAWDLVETGPDGWIFVLRDGLVYAHEKKTDQPPRFHHSSFFAGECVQAAGLFVATGGVLERLYPHSGHYRPSDSHLLSLLLFLEAQHVDMALMQVDVQLVMKVARSHDATKGGRRRKIDSPYMWTGLHAKYFLLAKRYAWDKKLFDEM 507
BLAST of mRNA_H-elongata_contig739.15081.1 vs. uniprot
Match: A0A7S2SKQ1_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SKQ1_9STRA) HSP 1 Score: 234 bits (596), Expect = 9.050e-62 Identity = 108/252 (42.86%), Postives = 157/252 (62.30%), Query Frame = 2
Query: 347 PPPQVLQGFKLHYVALDQGSWLEVRDEHHRYGKNLRLYFKEWDRQGNPGGSFFDWLSTPEVQLEVCPRHELERHVVHYCRPEERGKYALRLDVTAEGRAMLHTAKGEAVNSGPNAWLFVLRDGTIFATDKKTDPPRFHHSSFFGGGCVEAAGLLVAENGVLVTLYPHSGHYRPTNSHLQRFLRFLKGLGVDLSAIQVDAQRVHKVARPDKRTERRVRKMDNPFMVSGMYLLDYFDTKHKAWASSLFVDVRQK 1102
PP +V +G + + LD+ +WLEV D HRY K+LR Y++ WD PG F WL T +L+ CPR LE VHYC EER +YA+ ++ GR V++G W+FV+RDG ++A +K+T+PPRFHHSSFF G CVE AGL VA +G + ++PHSGHYRP ++ + L+FL +DLS+++VDAQ KVAR +R +++K D P + G LL + + K AW++ LF ++ ++
Sbjct: 241 PPDEVTRGLREGFSQLDRRAWLEVLDPKHRYAKHLRAYYQAWDLLDRPGSDFLSWLDTAGFELDSCPRSVLEADTVHYCSEEEREQYAIDIE---GGRVWFRGGDRRPVDTGSKGWIFVVRDGVVYAAEKRTEPPRFHHSSFFSGQCVEVAGLFVARDGWVCRVFPHSGHYRPGDTQIMHLLKFLDQRHLDLSSVEVDAQHTMKVARLLRREGNKMKKTDCPHFMRGDALLHFLERKFSAWSTPLFNELVER 489
BLAST of mRNA_H-elongata_contig739.15081.1 vs. uniprot
Match: A0A2D4BS79_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BS79_PYTIN) HSP 1 Score: 214 bits (545), Expect = 4.840e-58 Identity = 115/271 (42.44%), Postives = 161/271 (59.41%), Query Frame = 2
Query: 353 PQVLQGFKLHYVAL-DQGSWLEVRDEHHRYGKNLRLYFKEWDRQGNPGGSFFDWLSTPEVQLEVCPRHELERHVVHYCRPE-ERGKYALRLDVTAEGRAMLHTAKGEAVNSGPNAWLFVLRDGTIFATDKKTDP-PRFHHSSFFGGGCVEAAGLLVAENGVLVTLYPHSGHYRPTNSHLQRFLRFLKGLGVDLSAIQVDAQRVHKVARPDKRTERRVRKMDNPFMVSGMYLLDYFDTKHKAWASSLFVDVRQKARERDDRLHRASTGINYC 1156
P++++G+ +++ D+ SWLEV D HRYG NLR Y+KEW RQ SF++WL +++E PR +LER V YC + ER K+AL + +GR + H E V SG W+FVLRDG ++ K+T PR HH+SF G CV+ AG++V +NGV+ T+YPHSGHYRP+ L LRFL GVD+S ++VD QR+ KV R D RVRK+DN +L + + KH AW LF D+ ++H S ++ C
Sbjct: 28 PKLVKGYSAGNISVVDKKSWLEVCDRKHRYGANLRAYYKEWKRQAATP-SFWEWLDDESIEVEGVPRTKLERETVLYCDTDAERQKFALTI---RDGR-VFHVLSQEIVESGEEGWIFVLRDGVLYGGQKETKKIPRIHHTSFVAGECVQTAGMMVIKNGVIETIYPHSGHYRPSEHELLVLLRFLVAQGVDMSQVRVDVQRIQKVFR-DTVNGTRVRKIDNAHFWDAYRVLFFLEQKHLAWKIGLFDDIVDAVA----KMHNVSVEVDTC 288
BLAST of mRNA_H-elongata_contig739.15081.1 vs. uniprot
Match: A0A067CYU2_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CYU2_SAPPC) HSP 1 Score: 211 bits (537), Expect = 1.540e-57 Identity = 112/257 (43.58%), Postives = 155/257 (60.31%), Query Frame = 2
Query: 353 PQVLQGFKLHYVAL-DQGSWLEVRDEHHRYGKNLRLYFKEWDRQGNPGGSFFDWLSTPEVQLEVCPRHELERHVVHYCRPEERGKYALRLDVTAEGRAMLHTAKGEA-VNSGPNAWLFVLRDGTIFATDKKT-DPPRFHHSSFFGGGCVEAAGLLVAENGVLVTLYPHSGHYRPTNSHLQRFLRFLKGLGVDLSAIQVDAQRVHKVARPDKRTERRVRKMDNPFMVSGMYLLDYFDTKHKAWASSLFVDVRQKARER 1114
P + +GF VA+ D+ SWLEV D HRYG NLR Y+KEW + P F++WLS V++E PR +LE+ V Y ER KYAL + +LH ++ +A +++G W+FVLRDG ++ + K T PR HH+SF GG CV+ AG+LV GVL T+YPHSGHYRP+ S + LRFL GV L ++VD QR KV+R ++ + +V KM N + +L + K KAWA +LF D+ A+ R
Sbjct: 37 PVLARGFSTGNVAIVDKRSWLEVCDRKHRYGANLRAYYKEWKHRDGPKPDFWEWLSDESVEVEGVPRAKLEKETVLYYDKTERQKYALDIRY-----GLLHASRTQALIDTGEEGWIFVLRDGVLYGSAKVTKQTPRVHHTSFVGGECVQTAGILVIAQGVLTTIYPHSGHYRPSESEVLLLLRFLHEKGVRLDDVRVDVQRFQKVSR-ERASVAKVSKMANAHFWPALDVLQFLAAKEKAWAGTLFDDIEIAAKNR 287
BLAST of mRNA_H-elongata_contig739.15081.1 vs. uniprot
Match: A0A067CMQ2_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CMQ2_SAPPC) HSP 1 Score: 211 bits (538), Expect = 5.390e-57 Identity = 108/252 (42.86%), Postives = 156/252 (61.90%), Query Frame = 2
Query: 353 PQVLQGFKLHYVAL-DQGSWLEVRDEHHRYGKNLRLYFKEWDRQGNPGGSFFDWLSTPEVQLEVCPRHELERHVVHYCRPEERGKYALRLDVTAEGRAMLHTAKGEA-VNSGPNAWLFVLRDGTIFATDK-KTDPPRFHHSSFFGGGCVEAAGLLVAENGVLVTLYPHSGHYRPTNSHLQRFLRFLKGLGVDLSAIQVDAQRVHKVARPDKRTERRVRKMDNPFMVSGMYLLDYFDTKHKAWASSLFVDVRQ 1099
P +++GF +A+ D+ SWLEV D HRYG NLR Y+KEW R P F++WL V+++ PR +LE V YC ER K+AL +G ML+T +A V +G + W+FVLRDG ++ ++K T PR HH+S GG CV+ AG++V NG L +YPHSGHYRP+ + + LRFL+G G++L + VD QR+ KV+R ++ +V+K+DN +G LD+ + K W S LFVD+ +
Sbjct: 29 PVLVKGFSTGNIAVVDKRSWLEVCDRKHRYGANLRAYYKEWKRYEGPKPGFWEWLDDESVEVDGVPRAKLESETVLYCDKAERQKFALTF---RDG--MLYTVADDAPVETGDDGWIFVLRDGVLYGSEKVTTQVPRIHHTSLSGGECVQTAGMMVVSNGTLNIIYPHSGHYRPSENEVLVLLRFLEGHGIELEDVLVDVQRIQKVSR-ERSNNVKVKKLDNAHFWNGRMALDFLELKDFVWHSDLFVDLER 274
BLAST of mRNA_H-elongata_contig739.15081.1 vs. uniprot
Match: A0A1V9YJX7_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YJX7_9STRA) HSP 1 Score: 210 bits (535), Expect = 8.060e-57 Identity = 105/257 (40.86%), Postives = 155/257 (60.31%), Query Frame = 2
Query: 353 PQVLQGFKLHYVAL-DQGSWLEVRDEHHRYGKNLRLYFKEWDRQGNPGGSFFDWLSTPEVQLEVCPRHELERHVVHYCRPEERGKYALRLDVTAEGRAMLHTAKGEAVNSGPNAWLFVLRDGTIFATDK-KTDPPRFHHSSFFGGGCVEAAGLLVAENGVLVTLYPHSGHYRPTNSHLQRFLRFLKGLGVDLSAIQVDAQRVHKVARPDKRTERRVRKMDNPFMVSGMYLLDYFDTKHKAWASSLFVDVRQKARERD 1117
P +++GF VA+ D+ SWLEV D HRYG NLR Y+KEW R P F++WL +++E PR +LE V YC +R K+AL G ++ TA V++G + W+FVLRDG ++ ++K T PR HH+S GG CV+ AG++V NG L +YPHSGHYRP+ + + LRFL+ G+ LS + VD QR+ KV+R ++ +V+K++N +G LD+ + K W S LF D+ + +R+
Sbjct: 23 PVLVKGFSSGNVAVVDKRSWLEVCDRKHRYGANLRAYYKEWKRYEGPKPGFWEWLDDETIEVEGVPRTKLESETVLYCDKTQRQKFALGF----HGGMLVTTADMAPVDTGDDGWIFVLRDGVLYGSEKVTTQVPRIHHTSLSGGECVQTAGMMVVSNGTLNIIYPHSGHYRPSENEVLVLLRFLQAHGIVLSDVLVDVQRIQKVSR-ERTNNAKVKKLENAHFWNGQQALDFLELKDFVWHSDLFADLERTVAQRE 274
BLAST of mRNA_H-elongata_contig739.15081.1 vs. uniprot
Match: A0A1W0A215_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A215_9STRA) HSP 1 Score: 206 bits (524), Expect = 8.950e-56 Identity = 107/257 (41.63%), Postives = 155/257 (60.31%), Query Frame = 2
Query: 353 PQVLQGFKLHYVAL-DQGSWLEVRDEHHRYGKNLRLYFKEWDRQGNPGGSFFDWLSTPEVQLEVCPRHELERHVVHYCRPEERGKYALRLDVTAEGRAMLHTAKG-EAVNSGPNAWLFVLRDGTIFATDKKTDP-PRFHHSSFFGGGCVEAAGLLVAENGVLVTLYPHSGHYRPTNSHLQRFLRFLKGLGVDLSAIQVDAQRVHKVARPDKRTERRVRKMDNPFMVSGMYLLDYFDTKHKAWASSLFVDVRQKARER 1114
P + +G+ A+ D+ SWLEV D+ HRYG NLR Y+K W R +P F++WLS V++E PR +LE+ V Y ER ++A+ + +LH A E +++G W+FVLRDG ++ + K T PR HH+SF GG CV+ AG++V E GVL +YPHSGHYRPT S + LRFL G GV L+ ++VD QR KV+R ++ ++ K N +++L++ K KAWA +LF D+ A+ R
Sbjct: 39 PVLARGYSSGNEAIVDKRSWLEVCDQKHRYGGNLRAYYKAWKRCDDPKPEFWEWLSDESVEVEGVPRTKLEKETVVYYNKTERKQFAMDIRY-----GLLHKASTPELIDTGEEGWIFVLRDGVLYGSAKVTKQVPRIHHTSFVGGECVQTAGIMVIEQGVLKVIYPHSGHYRPTESEVLVLLRFLLGRGVRLNDVEVDVQRFQKVSR-ERDNVSKISKKANAMFWPALHVLNFLQVKEKAWAGTLFDDLEMAAKNR 289
BLAST of mRNA_H-elongata_contig739.15081.1 vs. uniprot
Match: A0A1V9YJY3_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YJY3_9STRA) HSP 1 Score: 204 bits (520), Expect = 2.800e-55 Identity = 108/257 (42.02%), Postives = 153/257 (59.53%), Query Frame = 2
Query: 353 PQVLQGFKLHYVAL-DQGSWLEVRDEHHRYGKNLRLYFKEWDRQGNPGGSFFDWLSTPEVQLEVCPRHELERHVVHYCRPEERGKYALRLDVTAEGRAMLHTAKG-EAVNSGPNAWLFVLRDGTIFATDKKT-DPPRFHHSSFFGGGCVEAAGLLVAENGVLVTLYPHSGHYRPTNSHLQRFLRFLKGLGVDLSAIQVDAQRVHKVARPDKRTERRVRKMDNPFMVSGMYLLDYFDTKHKAWASSLFVDVRQKARER 1114
P + +G+ +A+ D+ SWLEV D HRYG NLR YFK W RQ P F++WL+ V++E PR +LE+ V Y +R ++ + A +LH A E +++G + W+FVLRDG ++AT K T PR HH+SF GG CV+ AG++V GVL T+YPHSGHYRP+ S + LRFL GV L + VD QR KV+R ++ +V KM+N + +L + + K KAW +LF D+ A+ R
Sbjct: 36 PVLARGYSSGNIAIVDKRSWLEVCDRKHRYGANLRAYFKAWKRQDEPKPDFWEWLNDETVEVEGVPRAKLEKETVVYYDKTQRTQFEV-----AFRYGLLHVASTQELIDTGDDGWIFVLRDGVLYATAKVTKQTPRIHHTSFVGGECVQTAGIIVVAQGVLTTIYPHSGHYRPSESEVLVLLRFLHQHGVRLQDVAVDVQRFQKVSR-ERTHVAKVSKMENAYFWPAPDVLLFLEAKEKAWGGTLFDDIEMAAKSR 286 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig739.15081.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig739.15081.1 >prot_H-elongata_contig739.15081.1 ID=prot_H-elongata_contig739.15081.1|Name=mRNA_H-elongata_contig739.15081.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=388bp MYMRMCLCVLISTEPSSPRETNFVDVSGPSSDQDHPSSLHYRSYSWEASHback to top mRNA from alignment at H-elongata_contig739:10638..17830- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig739.15081.1 ID=mRNA_H-elongata_contig739.15081.1|Name=mRNA_H-elongata_contig739.15081.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=7193bp|location=Sequence derived from alignment at H-elongata_contig739:10638..17830- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig739:10638..17830- >mRNA_H-elongata_contig739.15081.1 ID=mRNA_H-elongata_contig739.15081.1|Name=mRNA_H-elongata_contig739.15081.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2328bp|location=Sequence derived from alignment at H-elongata_contig739:10638..17830- (Himanthalia elongata Himel1 dioecious)back to top |