mRNA_H-elongata_contig73677.15060.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig73677.15060.1 vs. uniprot
Match: D7FP84_ECTSI (DRTGG domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP84_ECTSI) HSP 1 Score: 262 bits (670), Expect = 5.590e-86 Identity = 130/179 (72.63%), Postives = 149/179 (83.24%), Query Frame = 1
Query: 1 SWDVPLLGVVPDEPYLARPALIDLEKIFKTKLLAGFENRRQPHYSIKHTNMAATGLRVFLEKLESSHPDP-----------VLGFYAHAQKIKESGEGFGGALVLTGQDRRPVSYIENLLKLNGIPTIVSNLSTYETMDKIRSYTPKLHKDDDVRVRLAVSHYEPYINFDTLLRDTSSS 504
SWDVPLLGVVPDE YLARP+LIDLEKIFKTKLLAGFENRRQPHYSIKHT++AAT L VFLEKLE + P+P VLGF AHA+ KE G FGGA+VLTG D RP+ Y+E LLK++ IP IVSNLST++TMD+IRSYTPKLHK+D+VRVRLAVSHYEP+I+FDTLLR T +S
Sbjct: 2 SWDVPLLGVVPDESYLARPSLIDLEKIFKTKLLAGFENRRQPHYSIKHTHLAATDLHVFLEKLECAPPNPLVVTHCTRDDIVLGFLAHARNSKERGHSFGGAMVLTGLDLRPMDYVEELLKIHDIPVIVSNLSTFDTMDRIRSYTPKLHKEDEVRVRLAVSHYEPHIDFDTLLRPTDNS 180
BLAST of mRNA_H-elongata_contig73677.15060.1 vs. uniprot
Match: A0A836CAU9_9STRA (AAA domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAU9_9STRA) HSP 1 Score: 205 bits (521), Expect = 7.040e-61 Identity = 100/172 (58.14%), Postives = 126/172 (73.26%), Query Frame = 1
Query: 4 WDVPLLGVVPDEPYLARPALIDLEKIFKTKLLAGFENRRQPHYSIKHTNMAATGLRVFLEKLESSHPDP-----------VLGFYAHAQKIKESGEGFGGALVLTGQDRRPVSYIENLLKLNGIPTIVSNLSTYETMDKIRSYTPKLHKDDDVRVRLAVSHYEPYINFDTLL 486
WD+PLLGVVPDEPYL RP+L+DLEKIFKTKLLAG R++PHY+ K T M ATGL++F++KL + P +LGF AHAQ++++ G F GALVLTG+ ++YI +L +P ++S ST+ TMD IRSYTPKLHKDD VR+ LAVSHYEPYI+FDTLL
Sbjct: 200 WDIPLLGVVPDEPYLGRPSLMDLEKIFKTKLLAGERCRKRPHYNTKDTLMVATGLKLFVDKLGALREAPLIVTHVTRNDIILGFLAHAQRLQQEGHDFNGALVLTGRQDPVIAYIMEMLSAQDLPVLLSKESTFNTMDMIRSYTPKLHKDDQVRLELAVSHYEPYIDFDTLL 371
BLAST of mRNA_H-elongata_contig73677.15060.1 vs. uniprot
Match: A0A7S2MJ27_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MJ27_9STRA) HSP 1 Score: 141 bits (355), Expect = 1.310e-35 Identity = 88/193 (45.60%), Postives = 113/193 (58.55%), Query Frame = 1
Query: 4 WDVPLLGVVPDEPYLARPALIDLEKIFKTKLLAGFENRRQPHYSIKHTNMAATGLRVFLEKLES-----------SHPDPVLGFYAHAQKIKESGEG---FGGALVLTGQ-DRRPVS--YIENLLKLNGIPTIVSNLSTYETMDKIRSYTPKLHKDDDVRVRLAVSHYEPYINFDTLLR----DTSSSRGRDS 519
W VPLLG VPD PYL PAL DLEKIFKT L+ G ++R + HYS++ N+ T L FLE L + + D +LGF A Q+ K+S AL++ G+ D+ VS I+ ++ L+G P ++ ST+E M KI YTPKL+ DD RV AV HYEPYI+FD LLR D SS RDS
Sbjct: 262 WGVPLLGCVPDRPYLGCPALFDLEKIFKTNLMVGTKHRFR-HYSVEDINLITTSLTRFLENLRTKPSRTLYICHVTRDDIILGFMAEYQRRKKSMGAEPPLEAALIVCGRKDKYEVSDEVIDMIMGLDGAPVMIVEYSTHEAMQKIHDYTPKLNIDDKNRVMTAVEHYEPYIDFDELLRRTTSDDSSFNDRDS 453
BLAST of mRNA_H-elongata_contig73677.15060.1 vs. uniprot
Match: A0A7S4VVA3_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VVA3_9STRA) HSP 1 Score: 140 bits (352), Expect = 5.090e-35 Identity = 83/184 (45.11%), Postives = 111/184 (60.33%), Query Frame = 1
Query: 4 WDVPLLGVVPDEPYLARPALIDLEKIFKTKLLAGFENRRQPHYSIKHTNMAATGLRVFLEKLES-----------SHPDPVLGFYAHAQK-IKESGEG--FGGALVLTGQ-DRRPVS--YIENLLKLNGIPTIVSNLSTYETMDKIRSYTPKLHKDDDVRVRLAVSHYEPYINFDTLLRDTSSS 504
W VPLLG VPD PYL PAL DLEK+F L+ G ++R + HYS+ N+ T L FLE L S + D +LGF A Q+ +K +G AL++ G+ D+ PVS ++ ++ L+G P ++ ST+E M KI SYTPKL+ DD RV AV HYEPYI+FD LL+ T+SS
Sbjct: 286 WGVPLLGCVPDRPYLGCPALYDLEKVFNVDLMVGAKHRFR-HYSVDDINLITTSLTRFLENLRSKPSRTLYICHITRDDIILGFMAEYQRRMKSNGAEPPLEAALIVCGRKDKYPVSKEILDMIMGLDGAPCMIVECSTHEAMSKIHSYTPKLNIDDKARVNTAVEHYEPYIDFDQLLKRTTSS 468
BLAST of mRNA_H-elongata_contig73677.15060.1 vs. uniprot
Match: A0A7S1D662_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D662_CYCTE) HSP 1 Score: 129 bits (323), Expect = 3.360e-31 Identity = 71/182 (39.01%), Postives = 108/182 (59.34%), Query Frame = 1
Query: 4 WDVPLLGVVPDEPYLARPALIDLEKIFKTKLLAGFENRRQPHYSIKHTNMAATGLRVFLEKLES-----------SHPDPVLGFYAHAQKIK-ESGEGFGGALVLTGQDRR---PVSYIENLLKLNGIPTIVSNLSTYETMDKIRSYTPKLHKDDDVRVRLAVSHYEPYINFDTLLRDTSSS 504
W +PLLG +PD P+L PAL+DLE +F+T+L++G E+ + HY+++ N+ T L FLE L + D +LGF Q+ K + E F AL++ G+ + ++ +L LN P ++ T++ M +I S+TPKL+ D RV++AV HYEPYI+FD LLR TSS+
Sbjct: 232 WGIPLLGCIPDRPFLGCPALVDLENLFRTELISG-EHYKYRHYNMQDINLVTTSLTRFLENLRHKPSRTLYICHITRDDLILGFMGEYQRRKRDCAEPFEAALLVCGRKGKYQLSPELLDMMLSLNDAPMMLVEFPTHQVMSQINSFTPKLNIGDTNRVQVAVDHYEPYIDFDELLRRTSSN 412
BLAST of mRNA_H-elongata_contig73677.15060.1 vs. uniprot
Match: A0A7S4IK47_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IK47_9STRA) HSP 1 Score: 124 bits (312), Expect = 7.770e-31 Identity = 71/182 (39.01%), Postives = 107/182 (58.79%), Query Frame = 1
Query: 4 WDVPLLGVVPDEPYLARPALIDLEKIFKTKLLAGFENRRQPHYSIKHTNMAATGLRVFLEKLES--------SH---PDPVLGFYAHAQKIKESGEGFGGALVLTGQDRR--PVSYIENLLK---LNGIPTIVSNLSTYETMDKIRSYTPKLHKDDDVRVRLAVSHYEPYINFDTLLRDTSS 501
W VPLLG +PD P+L PAL DLE++F T+L+ G +R + HY + N+ T L+ FLE + SH D +LGF ++K G F AL+L G++ + I ++LK L +P +++ +ST++ M +R+ TPKL+ D+ RV +AV HYEP+I+F+ LL TSS
Sbjct: 58 WGVPLLGCIPDRPFLGCPALADLERLFDTRLIGGGRHRFR-HYRVPDINLVTTSLKRFLENVRQKPSRTLYVSHVTRDDIILGFLGEYTRLKRRGVPFESALILCGRENKYDVCPQILDILKDPELADVPIMIAKMSTHDAMGAMRTLTPKLNIGDNHRVEIAVEHYEPHIDFELLLERTSS 238
BLAST of mRNA_H-elongata_contig73677.15060.1 vs. uniprot
Match: B8BV89_THAPS (DRTGG domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BV89_THAPS) HSP 1 Score: 127 bits (319), Expect = 1.120e-30 Identity = 73/183 (39.89%), Postives = 105/183 (57.38%), Query Frame = 1
Query: 1 SWDVPLLGVVPDEPYLARPALIDLEKIFKTKLLAGFENRRQPHYSIKHTNMAATGLRVFLEKLESSHP-----------DPVLGFYAHAQKIKESGEG-FGGALVLTGQDRR--PVSYIENLLK-LNGIPTIVSNLSTYETMDKIRSYTPKLHKDDDVRVRLAVSHYEPYINFDTLLRDTSSS 504
+W +PLLG +PD P+L PAL DLEK+F T+L+ G E+ R HYS++ N+ T L FLE + S P D +LGF A Q+ + E F AL++ G+ + + ++ + ++G P +V ST+E M I +TPKL+ DD RVR AV HYEPYI+ D L+ SS+
Sbjct: 242 TWGIPLLGCIPDRPFLGCPALADLEKLFHTELVCG-ESHRFRHYSVRDINLITTSLTRFLENIRSKAPRTLYICHVTRDDIILGFMAEYQRNRREEERPFEAALLVCGRKEKYQMAEEVRDMFEGMDGAPVMVVEYSTHEAMQMIHHFTPKLNIDDKNRVRTAVEHYEPYIDMDLLIERCSSN 423
BLAST of mRNA_H-elongata_contig73677.15060.1 vs. uniprot
Match: A0A7S0GEP3_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GEP3_9STRA) HSP 1 Score: 127 bits (320), Expect = 1.120e-30 Identity = 74/181 (40.88%), Postives = 100/181 (55.25%), Query Frame = 1
Query: 1 SWDVPLLGVVPDEPYLARPALIDLEKIFKTKLLAGFENRRQPHYSIKHTNMAATGLRVFLEKLES-----------SHPDPVLGFYAHAQKIKESGEGFGGALVLTGQDRR--PVSYIENLLKLNGIPTIVSNLSTYETMDKIRSYTPKLHKDDDVRVRLAVSHYEPYINFDTLLRDTSSS 504
+W VPLLG VPD+P+L PAL D E++F KLL G +R + HY + N+ T L FLE L S + D +LGF Q+ + GE F AL++ G+ + + +++K P + ST M+ I +TPKL+ DD RV AV HYEPYI+FD LLR TSSS
Sbjct: 250 TWGVPLLGCVPDKPFLGCPALADFERLFNAKLLGGCRHRMR-HYRLSDINLVTTSLCHFLENLRSKPDRTLYVCHITRNDVLLGFLGEHQRAIKKGEKFESALLVCGRKGKYEMSPQVRDMVKGGDAPVLFVEYSTNSAMEMIHDFTPKLNIDDTSRVAHAVDHYEPYIDFDELLRRTSSS 429
BLAST of mRNA_H-elongata_contig73677.15060.1 vs. uniprot
Match: A0A7S4HPI2_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HPI2_9STRA) HSP 1 Score: 127 bits (319), Expect = 1.180e-30 Identity = 73/182 (40.11%), Postives = 107/182 (58.79%), Query Frame = 1
Query: 1 SWDVPLLGVVPDEPYLARPALIDLEKIFKTKLLAGFENRRQPHYSIKHTNMAATGLRVFLEKLES-----------SHPDPVLGFYAHAQKIKESGEG-FGGALVLTGQDRRP--VSYIENLLK-LNGIPTIVSNLSTYETMDKIRSYTPKLHKDDDVRVRLAVSHYEPYINFDTLLRDTSS 501
+W VPLLG VPD PYL PAL DLE++F+ +L+ G ++R + HY++ N+ T L FLE L + D +LGF + Q+ + E F AL++ G+ + +++++ L G P +V + ST++ M KI +TPKL+ DD RV AV HYEPYI+FD LLR T+S
Sbjct: 227 AWGVPLLGCVPDRPYLGCPALFDLERLFRAELICGAKHRFR-HYNVNDLNLVTTSLTRFLENLREKPSRTLYVCHVTRDDLILGFMSEYQRTRAVDERPFEAALIICGRKGKYQIADEVKDMINGLEGAPIMVVDFSTHQAMQKIHEFTPKLNIDDRNRVGKAVEHYEPYIDFDELLRRTTS 407
BLAST of mRNA_H-elongata_contig73677.15060.1 vs. uniprot
Match: A0A1Z5KQW9_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KQW9_FISSO) HSP 1 Score: 123 bits (309), Expect = 4.610e-29 Identity = 71/183 (38.80%), Postives = 107/183 (58.47%), Query Frame = 1
Query: 1 SWDVPLLGVVPDEPYLARPALIDLEKIFKTKLLAGFENRRQPHYSIKHTNMAATGLRVFLEKLES-----------SHPDPVLGFYAHAQK-IKESGEGFGGALVLTGQDRRPV--SYIENLLK-LNGIPTIVSNLSTYETMDKIRSYTPKLHKDDDVRVRLAVSHYEPYINFDTLLRDTSSS 504
+W VPL+G +PD P+L PAL DLE +FKT+L++G ++R HYS N+ T L FLE L + D ++GF Q+ + + + F AL++ G+ + + N+L L+G P + ++ST++ M KI S+TPKL+ D RV +AV HYEP+I+FDTL+ T SS
Sbjct: 258 AWGVPLIGCIPDRPFLGCPALADLETLFKTQLISGKKHRLW-HYSPADINLVTTNLNRFLENLHEKPSRTLYICHVTRDDLIVGFLGEFQRRLGKESDPFEAALIVCGRRGKYQLSKEVSNMLTGLDGAPVMTVDMSTHDVMSKIHSFTPKLNIQDTNRVAVAVDHYEPHIDFDTLIHRTQSS 439 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig73677.15060.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig73677.15060.1 >prot_H-elongata_contig73677.15060.1 ID=prot_H-elongata_contig73677.15060.1|Name=mRNA_H-elongata_contig73677.15060.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=124bp MAATGLRVFLEKLESSHPDPVLGFYAHAQKIKESGEGFGGALVLTGQDRRback to top mRNA from alignment at H-elongata_contig73677:67..2702+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig73677.15060.1 ID=mRNA_H-elongata_contig73677.15060.1|Name=mRNA_H-elongata_contig73677.15060.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2636bp|location=Sequence derived from alignment at H-elongata_contig73677:67..2702+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig73677:67..2702+ >mRNA_H-elongata_contig73677.15060.1 ID=mRNA_H-elongata_contig73677.15060.1|Name=mRNA_H-elongata_contig73677.15060.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=744bp|location=Sequence derived from alignment at H-elongata_contig73677:67..2702+ (Himanthalia elongata Himel1 dioecious)back to top |