mRNA_H-elongata_contig73668.15058.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig73668.15058.1 vs. uniprot
Match: A0A6H5LB76_9PHAE (PKD domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LB76_9PHAE) HSP 1 Score: 92.8 bits (229), Expect = 1.810e-20 Identity = 41/60 (68.33%), Postives = 52/60 (86.67%), Query Frame = 1
Query: 19 LEAKGFRNPFRLAILPGSGNVVVADMGLNTAESLNVVRNPLEAEEGAAMGNYGWPCMEGN 198
LEAKGFRNPFRLA+ P SG+V++AD+GL++AES+ VV NPLEA E +M NYGWPC+EG+
Sbjct: 284 LEAKGFRNPFRLAVSPVSGDVIIADVGLDSAESIKVVPNPLEAAETVSMPNYGWPCIEGD 343
BLAST of mRNA_H-elongata_contig73668.15058.1 vs. uniprot
Match: A0A323V9N6_9ACTN (Glucose/arabinose dehydrogenase n=1 Tax=Modestobacter versicolor TaxID=429133 RepID=A0A323V9N6_9ACTN) HSP 1 Score: 62.4 bits (150), Expect = 9.150e-10 Identity = 28/65 (43.08%), Postives = 42/65 (64.62%), Query Frame = 1
Query: 1 DSPLNQLEAKGFRNPFRLAILPGSGNVVVADMGLNTAESLNVVRNPLEAEEGAAMGNYGWPCMEG 195
D+ ++ A G RNPFR+A+ PG+ + ++D+G T+E LN + NP AA+ N+GWPC EG
Sbjct: 289 DANARRIVAYGLRNPFRMAVRPGTSELWISDVGWATSEELNRIPNPT-----AAVTNFGWPCYEG 348
BLAST of mRNA_H-elongata_contig73668.15058.1 vs. uniprot
Match: UPI000A2F6247 (PQQ-dependent sugar dehydrogenase n=1 Tax=Catelliglobosispora koreensis TaxID=129052 RepID=UPI000A2F6247) HSP 1 Score: 62.4 bits (150), Expect = 9.160e-10 Identity = 30/66 (45.45%), Postives = 39/66 (59.09%), Query Frame = 1
Query: 1 DSPLNQLEAKGFRNPFRLAILPGSGNVVVADMGLNTAESLNVVRNPLEAEEGAAMGNYGWPCMEGN 198
D ++ A G RNPFR+A+ PG+ V D+G NT E +N V NP A + N+GWPC EGN
Sbjct: 250 DLNTRRIVANGLRNPFRIAMKPGTNEVWAGDVGWNTWEEINRVVNPT-----AGVTNFGWPCYEGN 310
BLAST of mRNA_H-elongata_contig73668.15058.1 vs. uniprot
Match: A0A7C3QL76_9CHLR (Sugar dehydrogenase (Fragment) n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A7C3QL76_9CHLR) HSP 1 Score: 61.2 bits (147), Expect = 2.310e-9 Identity = 26/61 (42.62%), Postives = 40/61 (65.57%), Query Frame = 1
Query: 16 QLEAKGFRNPFRLAILPGSGNVVVADMGLNTAESLNVVRNPLEAEEGAAMGNYGWPCMEGN 198
++ A G RNPFRLA+ PG+ + + D+G N+ E +N V +P ++ + N+GWPC EGN
Sbjct: 291 RIVAYGLRNPFRLAVRPGTNEIWIGDVGWNSREEMNRVADPTDSY----VDNFGWPCYEGN 347
BLAST of mRNA_H-elongata_contig73668.15058.1 vs. uniprot
Match: UPI001EDE939B (discoidin domain-containing protein n=1 Tax=Dactylosporangium sp. AC04546 TaxID=2862460 RepID=UPI001EDE939B) HSP 1 Score: 60.5 bits (145), Expect = 4.380e-9 Identity = 30/65 (46.15%), Postives = 41/65 (63.08%), Query Frame = 1
Query: 1 DSPLNQLEAKGFRNPFRLAILPGSGNVVVADMGLNTAESLNVVRNPLEAEEGAAMGNYGWPCMEG 195
D+ ++ A GFRNP+RLA+ PG+ V VAD G + E ++ V +P AA+ NYGWPC EG
Sbjct: 271 DANAKRIVAYGFRNPYRLAVRPGTNEVWVADTGWSRWEEIDRVVSPT-----AAVTNYGWPCYEG 330
BLAST of mRNA_H-elongata_contig73668.15058.1 vs. uniprot
Match: A0A8F8U5M8_9ACTN (GSDH domain-containing protein n=1 Tax=Nonomuraea coxensis DSM 45129 TaxID=1122611 RepID=A0A8F8U5M8_9ACTN) HSP 1 Score: 59.3 bits (142), Expect = 7.540e-9 Identity = 26/57 (45.61%), Postives = 36/57 (63.16%), Query Frame = 1
Query: 25 AKGFRNPFRLAILPGSGNVVVADMGLNTAESLNVVRNPLEAEEGAAMGNYGWPCMEG 195
A G RNPFR+A+ PG+ + + ++G NT E +N V NP A + N+GWPC EG
Sbjct: 171 AHGLRNPFRMAVRPGTSEIWLGEVGWNTVEEINRVVNPT-----AGVTNFGWPCYEG 222
BLAST of mRNA_H-elongata_contig73668.15058.1 vs. uniprot
Match: A0A8J4E924_9ACTN (PKD domain-containing protein n=1 Tax=Virgisporangium ochraceum TaxID=65505 RepID=A0A8J4E924_9ACTN) HSP 1 Score: 56.6 bits (135), Expect = 9.900e-8 Identity = 28/66 (42.42%), Postives = 39/66 (59.09%), Query Frame = 1
Query: 1 DSPLNQLEAKGFRNPFRLAILPGSGNVVVADMGLNTAESLNVVRNPLEAEEGAAMGNYGWPCMEGN 198
D+ ++ + G RNPFR A+ PG+ V + ++G N E +N R P + MGNYGWPC EGN
Sbjct: 255 DANARRIVSYGLRNPFRFAMRPGTNEVWLTEVGWNGYEEVN--RVPTDT-----MGNYGWPCYEGN 313
BLAST of mRNA_H-elongata_contig73668.15058.1 vs. uniprot
Match: A0A8J7KH60_9ACTN (Alpha-amylase n=1 Tax=Longispora fulva TaxID=619741 RepID=A0A8J7KH60_9ACTN) HSP 1 Score: 56.6 bits (135), Expect = 9.960e-8 Identity = 27/66 (40.91%), Postives = 37/66 (56.06%), Query Frame = 1
Query: 1 DSPLNQLEAKGFRNPFRLAILPGSGNVVVADMGLNTAESLNVVRNPLEAEEGAAMGNYGWPCMEGN 198
D+ ++ + G RNPFRLA+ PG+ V D+G NT E L+ + P N+GWPC EGN
Sbjct: 269 DANARRISSYGLRNPFRLAVRPGTSEVWAGDVGWNTWEELDRLATP--------GSNFGWPCHEGN 326
BLAST of mRNA_H-elongata_contig73668.15058.1 vs. uniprot
Match: A0A0K3AV47_9PSEU (Cytochrome c551/c552 n=1 Tax=Kibdelosporangium sp. MJ126-NF4 TaxID=703222 RepID=A0A0K3AV47_9PSEU) HSP 1 Score: 55.8 bits (133), Expect = 1.830e-7 Identity = 27/66 (40.91%), Postives = 38/66 (57.58%), Query Frame = 1
Query: 1 DSPLNQLEAKGFRNPFRLAILPGSGNVVVADMGLNTAESLNVVRNPLEAEEGAAMGNYGWPCMEGN 198
D+ ++ A G RNPFR+AI PG+ + V D+G T E +N + +A N+GWPC EGN
Sbjct: 36 DANAKRVVAYGLRNPFRMAIRPGTNELWVGDVGWGTWEEINRITTTGDA----VAENFGWPCYEGN 97
BLAST of mRNA_H-elongata_contig73668.15058.1 vs. uniprot
Match: UPI001D100D69 (PQQ-dependent sugar dehydrogenase n=1 Tax=Aquihabitans sp. Kera 3 TaxID=2884263 RepID=UPI001D100D69) HSP 1 Score: 54.3 bits (129), Expect = 6.480e-7 Identity = 26/59 (44.07%), Postives = 37/59 (62.71%), Query Frame = 1
Query: 19 LEAKGFRNPFRLAILPGSGNVVVADMGLNTAESLNVVRNPLEAEEGAAMGNYGWPCMEG 195
L A G RNPFRLA+ PG+ V + D+G N+ E L+ + + + A+ N+GWPC EG
Sbjct: 287 LIAHGLRNPFRLAVRPGTDEVWIGDVGWNSWEELDRIDSATDD----AVENFGWPCREG 341 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig73668.15058.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig73668.15058.1 >prot_H-elongata_contig73668.15058.1 ID=prot_H-elongata_contig73668.15058.1|Name=mRNA_H-elongata_contig73668.15058.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=66bp DSPLNQLEAKGFRNPFRLAILPGSGNVVVADMGLNTAESLNVVRNPLEAEback to top mRNA from alignment at H-elongata_contig73668:923..1120- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig73668.15058.1 ID=mRNA_H-elongata_contig73668.15058.1|Name=mRNA_H-elongata_contig73668.15058.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=198bp|location=Sequence derived from alignment at H-elongata_contig73668:923..1120- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig73668:923..1120- >mRNA_H-elongata_contig73668.15058.1 ID=mRNA_H-elongata_contig73668.15058.1|Name=mRNA_H-elongata_contig73668.15058.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=396bp|location=Sequence derived from alignment at H-elongata_contig73668:923..1120- (Himanthalia elongata Himel1 dioecious)back to top |