mRNA_H-elongata_contig73567.15047.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig73567.15047.1 vs. uniprot
Match: D7G3M1_ECTSI (Kinesin motor domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3M1_ECTSI) HSP 1 Score: 137 bits (346), Expect = 5.890e-35 Identity = 87/137 (63.50%), Postives = 97/137 (70.80%), Query Frame = 1
Query: 1 QVSEAQAMVGVPLESWEACSSVNLVDLAGSERVGHTGATGVRLQEAGSINRSLAALSDVIKALSDESRRNRSSTPASSAPPGSPKPSQGRRRPAAAGVSIRGGGGRGREGGGFFVPYRNSVLTQLLRESLGGNSRTV 411
Q S+A + G ESWEACS+VNLVDLAGSERV HTGATG+RLQEAGSINRSLAALSDVIKALS+ RR R P SA G P++ R GG G+G FVPYRNSVLT+LL+ESLGGNSRTV
Sbjct: 283 QTSQAWSPTGCSYESWEACSNVNLVDLAGSERVSHTGATGLRLQEAGSINRSLAALSDVIKALSEAQRRCR---PGGSA--GGRSPTRPRSPGKXXXXXXAGGAGKG------FVPYRNSVLTRLLKESLGGNSRTV 408
BLAST of mRNA_H-elongata_contig73567.15047.1 vs. uniprot
Match: A0A836CFR7_9STRA (P-loop containing nucleoside triphosphate hydrolase protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFR7_9STRA) HSP 1 Score: 89.7 bits (221), Expect = 3.690e-20 Identity = 61/118 (51.69%), Postives = 68/118 (57.63%), Query Frame = 1
Query: 58 SSVNLVDLAGSERVGHTGATGVRLQEAGSINRSLAALSDVIKALSDESRRNRSSTPASSAPPGSPKPSQGRRRPAAAGVSIRGGGGRGREGGGFFVPYRNSVLTQLLRESLGGNSRTV 411
S +NLVDLAGSERVG+TGA G+RL+EAGSINRSLAALSDVIK PP +P G FVPYRNS LT+LLRESLGGN+RTV
Sbjct: 29 SRLNLVDLAGSERVGNTGAAGLRLREAGSINRSLAALSDVIK------------------PPLTPS-----------------AGXXXXXXXXAFVPYRNSALTRLLRESLGGNARTV 111
BLAST of mRNA_H-elongata_contig73567.15047.1 vs. uniprot
Match: A0A2G8K9K7_STIJA (Kinesin-like protein n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8K9K7_STIJA) HSP 1 Score: 85.9 bits (211), Expect = 7.950e-17 Identity = 53/121 (43.80%), Postives = 71/121 (58.68%), Query Frame = 1
Query: 49 EACSSVNLVDLAGSERVGHTGATGVRLQEAGSINRSLAALSDVIKALSDESRRNRSSTPASSAPPGSPKPSQGRRRPAAAGVSIRGGGGRGREGGGFFVPYRNSVLTQLLRESLGGNSRTV 411
E S +NLVDLAGSER TGATG RL+E +IN+SL L +VI AL+D S + + PKP++G+R+ F+PYR+SVLT LL++SLGGNS+T+
Sbjct: 242 ETVSKINLVDLAGSERANSTGATGERLKEGANINKSLVTLGNVISALADVSLASNN-----------PKPTRGKRK-------------------SLFIPYRDSVLTWLLKDSLGGNSKTI 332
BLAST of mRNA_H-elongata_contig73567.15047.1 vs. uniprot
Match: A0A2G8JST2_STIJA (Kinesin-like protein n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8JST2_STIJA) HSP 1 Score: 85.9 bits (211), Expect = 8.470e-17 Identity = 53/121 (43.80%), Postives = 71/121 (58.68%), Query Frame = 1
Query: 49 EACSSVNLVDLAGSERVGHTGATGVRLQEAGSINRSLAALSDVIKALSDESRRNRSSTPASSAPPGSPKPSQGRRRPAAAGVSIRGGGGRGREGGGFFVPYRNSVLTQLLRESLGGNSRTV 411
E S +NLVDLAGSER TGATG RL+E +IN+SL L +VI AL+D S + + PKP++G+R+ F+PYR+SVLT LL++SLGGNS+T+
Sbjct: 242 ETVSKINLVDLAGSERANSTGATGERLKEGANINKSLVTLGNVISALADVSLASNN-----------PKPTRGKRK-------------------SLFIPYRDSVLTWLLKDSLGGNSKTI 332
BLAST of mRNA_H-elongata_contig73567.15047.1 vs. uniprot
Match: A0A8K1FBC4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FBC4_PYTOL) HSP 1 Score: 83.2 bits (204), Expect = 7.780e-16 Identity = 57/118 (48.31%), Postives = 68/118 (57.63%), Query Frame = 1
Query: 58 SSVNLVDLAGSERVGHTGATGVRLQEAGSINRSLAALSDVIKALSDESRRNRSSTPASSAPPGSPKPSQGRRRPAAAGVSIRGGGGRGREGGGFFVPYRNSVLTQLLRESLGGNSRTV 411
S + LVDLAGSER +GATG RL+EAGSINRSL+ L+DVI ALS RR+ S +G G FVPYRNSVLT+LL+ESLGGN++TV
Sbjct: 359 SKICLVDLAGSERADISGATGKRLKEAGSINRSLSILADVISALS---RRSAS---------------------------------KGTLGANSFVPYRNSVLTRLLKESLGGNAKTV 440
BLAST of mRNA_H-elongata_contig73567.15047.1 vs. uniprot
Match: A0A2G5BHQ8_COERN (Kinesin-like protein n=1 Tax=Coemansia reversa (strain ATCC 12441 / NRRL 1564) TaxID=763665 RepID=A0A2G5BHQ8_COERN) HSP 1 Score: 81.6 bits (200), Expect = 2.450e-15 Identity = 57/120 (47.50%), Postives = 66/120 (55.00%), Query Frame = 1
Query: 49 EACSSVNLVDLAGSERVGHTGATGVRLQEAGSINRSLAALSDVIKALSDESRRNRSSTPASSAPPGSPKPSQGRRRPAAAGVSIRGGGGRGREGGGFFVPYRNSVLTQLLRESLGGNSRT 408
E S ++LVDLAGSER G T ATG RL+E IN+SLAAL VI AL+D+ RR PP SQ P FVPYR+SVLT LL++SLGGNSRT
Sbjct: 255 ERVSRISLVDLAGSERAGATMATGARLREGARINQSLAALGKVISALADQERR----------PPAPSSSSQASSVP--------------------FVPYRDSVLTWLLKDSLGGNSRT 344
BLAST of mRNA_H-elongata_contig73567.15047.1 vs. uniprot
Match: Q8AV74_LETRI (Kinesin-like protein (Fragment) n=1 Tax=Lethenteron reissneri TaxID=7753 RepID=Q8AV74_LETRI) HSP 1 Score: 79.0 bits (193), Expect = 5.320e-15 Identity = 54/120 (45.00%), Postives = 66/120 (55.00%), Query Frame = 1
Query: 49 EACSSVNLVDLAGSERVGHTGATGVRLQEAGSINRSLAALSDVIKALSDESRRNRSSTPASSAPPGSPKPSQGRRRPAAAGVSIRGGGGRGREGGGFFVPYRNSVLTQLLRESLGGNSRT 408
E S V+LVDLAGSER TGA G RL+E +IN+SL L VI AL+D + PPG + GGG ++ F+PYR+SVLT LLRE+LGGNSRT
Sbjct: 138 EKVSKVSLVDLAGSERADSTGAKGTRLKEGANINKSLTTLGKVISALAD----------VDAFPPG------------------KAGGGSKKKRRSDFIPYRDSVLTWLLRENLGGNSRT 229
BLAST of mRNA_H-elongata_contig73567.15047.1 vs. uniprot
Match: A0A2R5GGI7_9STRA (Kinesin-like protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GGI7_9STRA) HSP 1 Score: 80.5 bits (197), Expect = 6.710e-15 Identity = 57/121 (47.11%), Postives = 67/121 (55.37%), Query Frame = 1
Query: 49 EACSSVNLVDLAGSERVGHTGATGVRLQEAGSINRSLAALSDVIKALSDESRRNRSSTPASSAPPGSPKPSQGRRRPAAAGVSIRGGGGRGREGGGFFVPYRNSVLTQLLRESLGGNSRTV 411
E S + LVDLAGSERV +GATG RL+EA +INRSL+ALSDVIKAL+ P AA + G FVPYRNS LT LL+ESLGGN++TV
Sbjct: 379 EQSSKLYLVDLAGSERVSASGATGARLKEAANINRSLSALSDVIKALTT---------------------------PRAADTT-----------GKQFVPYRNSALTWLLKESLGGNAKTV 461
BLAST of mRNA_H-elongata_contig73567.15047.1 vs. uniprot
Match: A0A0J9X3N6_GEOCN (Kinesin-like protein n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9X3N6_GEOCN) HSP 1 Score: 80.1 bits (196), Expect = 8.370e-15 Identity = 56/120 (46.67%), Postives = 69/120 (57.50%), Query Frame = 1
Query: 49 EACSSVNLVDLAGSERVGHTGATGVRLQEAGSINRSLAALSDVIKALSDESRRNRSSTPASSAPPGSPKPSQGRRRPAAAGVSIRGGGGRGREGGGFFVPYRNSVLTQLLRESLGGNSRT 408
E S + LVDLAGSER TGATG RL+E +IN+SL L VI AL+D S + PGSP S +R+ GG G G +PYR+SVLT LL++SLGGNS+T
Sbjct: 320 EKTSRIRLVDLAGSERANSTGATGQRLREGSNINKSLTTLGRVIAALADNSGGDG---------PGSPGKSVSKRK-------AMGGSG---SGDSVVIPYRDSVLTWLLKDSLGGNSKT 420
BLAST of mRNA_H-elongata_contig73567.15047.1 vs. uniprot
Match: UPI001E1DA20A (kinesin-like protein KIF16B isoform X1 n=4 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DA20A) HSP 1 Score: 80.1 bits (196), Expect = 9.110e-15 Identity = 55/135 (40.74%), Postives = 70/135 (51.85%), Query Frame = 1
Query: 7 SEAQAMVGVPLESWEACSSVNLVDLAGSERVGHTGATGVRLQEAGSINRSLAALSDVIKALSDESRRNRSSTPASSAPPGSPKPSQGRRRPAAAGVSIRGGGGRGREGGGFFVPYRNSVLTQLLRESLGGNSRTV 411
++A G+P E S V+LVDLAGSER TGATG RL+E GSIN+SL +L VIK L++ S + S G F+PYR+SVLT LL++SLGGNSRT+
Sbjct: 236 TQATIKDGIPSEKM---SKVHLVDLAGSERATATGATGQRLREGGSINKSLVSLGTVIKQLAEVSEKGLKSAK------------------------------------GHFIPYRDSVLTWLLKDSLGGNSRTI 331 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig73567.15047.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig73567.15047.1 >prot_H-elongata_contig73567.15047.1 ID=prot_H-elongata_contig73567.15047.1|Name=mRNA_H-elongata_contig73567.15047.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=133bp MVGVPLESWEACSSVNLVDLAGSERVGHTGATGVRLQEAGSINRSLAALSback to top mRNA from alignment at H-elongata_contig73567:1096..3049+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig73567.15047.1 ID=mRNA_H-elongata_contig73567.15047.1|Name=mRNA_H-elongata_contig73567.15047.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1954bp|location=Sequence derived from alignment at H-elongata_contig73567:1096..3049+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig73567:1096..3049+ >mRNA_H-elongata_contig73567.15047.1 ID=mRNA_H-elongata_contig73567.15047.1|Name=mRNA_H-elongata_contig73567.15047.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=798bp|location=Sequence derived from alignment at H-elongata_contig73567:1096..3049+ (Himanthalia elongata Himel1 dioecious)back to top |