mRNA_H-elongata_contig73522.15042.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig73522.15042.1 vs. uniprot
Match: D8LC51_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC51_ECTSI) HSP 1 Score: 181 bits (458), Expect = 1.950e-52 Identity = 91/97 (93.81%), Postives = 96/97 (98.97%), Query Frame = 1
Query: 1 QVIGVGGGGGNAVNRMVQTGITGVEFWSLNTDAQALSRNLAPGKLAIGQSITRGLGAGGVPTVGRKAAEESMDDLRLVVQGADMVFVTCGMGGGTGA 291
+V+GVGGGGGNAVNRMVQTGI GVEFWSLNTDAQALSRNLAPGKLAIGQS+TRGLGAGGVP+VGRKAAEESMDDLRLVVQGADMVFVTCGMGGGTG+
Sbjct: 187 KVVGVGGGGGNAVNRMVQTGIAGVEFWSLNTDAQALSRNLAPGKLAIGQSVTRGLGAGGVPSVGRKAAEESMDDLRLVVQGADMVFVTCGMGGGTGS 283
BLAST of mRNA_H-elongata_contig73522.15042.1 vs. uniprot
Match: A0A835ZJQ7_9STRA (Tubulin/FtsZ, GTPase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJQ7_9STRA) HSP 1 Score: 162 bits (411), Expect = 8.890e-46 Identity = 84/97 (86.60%), Postives = 89/97 (91.75%), Query Frame = 1
Query: 1 QVIGVGGGGGNAVNRMVQTGITGVEFWSLNTDAQALSRNLAPGKLAIGQSITRGLGAGGVPTVGRKAAEESMDDLRLVVQGADMVFVTCGMGGGTGA 291
+VIGVGGGGGNAVNRMVQ+GI GVEFWS+NTDAQALSRNLAPGKLAIGQ +TRGLGAGG P VGRKAAEES DL LVVQGADMVFVT GMGGGTG+
Sbjct: 129 KVIGVGGGGGNAVNRMVQSGIAGVEFWSVNTDAQALSRNLAPGKLAIGQDVTRGLGAGGNPAVGRKAAEESRADLSLVVQGADMVFVTAGMGGGTGS 225
BLAST of mRNA_H-elongata_contig73522.15042.1 vs. uniprot
Match: A0A1Q8ZCN1_9CYAN (Cell division protein FtsZ n=1 Tax=Leptolyngbya sp. 'hensonii' TaxID=1922337 RepID=A0A1Q8ZCN1_9CYAN) HSP 1 Score: 139 bits (350), Expect = 1.670e-37 Identity = 67/96 (69.79%), Postives = 83/96 (86.46%), Query Frame = 1
Query: 1 QVIGVGGGGGNAVNRMVQTGITGVEFWSLNTDAQALSRNLAPGKLAIGQSITRGLGAGGVPTVGRKAAEESMDDLRLVVQGADMVFVTCGMGGGTG 288
+VIGVGGGGGNAVNRM+ +GITGVEFWS+NTDAQAL+ + AP +L +GQ ITRGLGAGG P +G+KAAEES DD+ ++G+D+VF+T GMGGGTG
Sbjct: 68 KVIGVGGGGGNAVNRMIHSGITGVEFWSINTDAQALTLSSAPKRLQVGQKITRGLGAGGNPAIGQKAAEESRDDVAAALEGSDLVFITSGMGGGTG 163
BLAST of mRNA_H-elongata_contig73522.15042.1 vs. uniprot
Match: K9PVU7_9CYAN (Cell division protein FtsZ n=3 Tax=Pseudanabaenales TaxID=2881377 RepID=K9PVU7_9CYAN) HSP 1 Score: 139 bits (349), Expect = 1.720e-37 Identity = 65/96 (67.71%), Postives = 84/96 (87.50%), Query Frame = 1
Query: 1 QVIGVGGGGGNAVNRMVQTGITGVEFWSLNTDAQALSRNLAPGKLAIGQSITRGLGAGGVPTVGRKAAEESMDDLRLVVQGADMVFVTCGMGGGTG 288
+VIGVGGGGGNAVNRM+++G++G++FWS+NTDAQAL+ LAP +L IGQ ITRGLGAGG P +G+KAAEES D++ ++GAD+VF+T GMGGGTG
Sbjct: 26 KVIGVGGGGGNAVNRMLESGVSGIDFWSINTDAQALTNALAPNRLQIGQKITRGLGAGGNPAIGQKAAEESRDEIAQALEGADLVFITAGMGGGTG 121
BLAST of mRNA_H-elongata_contig73522.15042.1 vs. uniprot
Match: A0A7S2DNR9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DNR9_9STRA) HSP 1 Score: 132 bits (331), Expect = 1.900e-36 Identity = 66/97 (68.04%), Postives = 81/97 (83.51%), Query Frame = 1
Query: 1 QVIGVGGGGGNAVNRMVQTGITGVEFWSLNTDAQALSRNLAPGKLAIGQSITRGLGAGGVPTVGRKAAEESMDDLRLVVQGADMVFVTCGMGGGTGA 291
+VIGVGGGGGNAVNRMV+T I GVEFW++NTDAQAL ++ A L IG +TRGLGAGG P+VG+ AA+ES D++ VV+GAD+VFVT GMGGGTG+
Sbjct: 80 KVIGVGGGGGNAVNRMVETNINGVEFWTVNTDAQALEKSTAKNTLNIGGIVTRGLGAGGNPSVGKSAADESRDEIAAVVRGADLVFVTAGMGGGTGS 176
BLAST of mRNA_H-elongata_contig73522.15042.1 vs. uniprot
Match: A0A355DTU6_9CYAN (Cell division protein FtsZ (Fragment) n=1 Tax=Cyanobacteria bacterium UBA11162 TaxID=2055781 RepID=A0A355DTU6_9CYAN) HSP 1 Score: 131 bits (330), Expect = 1.960e-36 Identity = 62/96 (64.58%), Postives = 81/96 (84.38%), Query Frame = 1
Query: 1 QVIGVGGGGGNAVNRMVQTGITGVEFWSLNTDAQALSRNLAPGKLAIGQSITRGLGAGGVPTVGRKAAEESMDDLRLVVQGADMVFVTCGMGGGTG 288
+VIGVGGGGGNAVNRM+ + + GVEFWS+NTDAQAL++N A +L +GQ +TRGLGAGG P +G+KAAEES D++ ++G+D+VF+T GMGGGTG
Sbjct: 67 KVIGVGGGGGNAVNRMIASEVAGVEFWSINTDAQALTQNSAAKRLQVGQKLTRGLGAGGNPAIGQKAAEESRDEIAQALEGSDLVFITAGMGGGTG 162
BLAST of mRNA_H-elongata_contig73522.15042.1 vs. uniprot
Match: K9TYZ2_CHRTP (Cell division protein FtsZ n=7 Tax=Chroococcidiopsidaceae TaxID=1890528 RepID=K9TYZ2_CHRTP) HSP 1 Score: 136 bits (342), Expect = 2.360e-36 Identity = 66/96 (68.75%), Postives = 81/96 (84.38%), Query Frame = 1
Query: 1 QVIGVGGGGGNAVNRMVQTGITGVEFWSLNTDAQALSRNLAPGKLAIGQSITRGLGAGGVPTVGRKAAEESMDDLRLVVQGADMVFVTCGMGGGTG 288
+VIGVGGGGGNAVNRM+++G+TGVEFWS+NTDAQAL+ + AP KL IGQ +TRGLGAGG P +G KAAEES D++ + AD+VF+T GMGGGTG
Sbjct: 68 KVIGVGGGGGNAVNRMIESGVTGVEFWSINTDAQALTHSAAPRKLQIGQKLTRGLGAGGNPAMGEKAAEESRDEIANAIGEADLVFITAGMGGGTG 163
BLAST of mRNA_H-elongata_contig73522.15042.1 vs. uniprot
Match: A0A3D1PJ78_9CYAN (Cell division protein FtsZ n=1 Tax=Cyanobacteria bacterium UBA11049 TaxID=2055787 RepID=A0A3D1PJ78_9CYAN) HSP 1 Score: 135 bits (341), Expect = 3.090e-36 Identity = 64/96 (66.67%), Postives = 83/96 (86.46%), Query Frame = 1
Query: 1 QVIGVGGGGGNAVNRMVQTGITGVEFWSLNTDAQALSRNLAPGKLAIGQSITRGLGAGGVPTVGRKAAEESMDDLRLVVQGADMVFVTCGMGGGTG 288
+VIGVGGGGGNA+NRM+ +GITGVEFWS+NTDAQAL+++ AP +L IGQ +TRGLGAGG P +G+KAAEES D++ ++ +D+VF+T GMGGGTG
Sbjct: 67 KVIGVGGGGGNAINRMIASGITGVEFWSINTDAQALTQSAAPRRLQIGQKLTRGLGAGGNPAIGQKAAEESRDEIAAALEHSDLVFITAGMGGGTG 162
BLAST of mRNA_H-elongata_contig73522.15042.1 vs. uniprot
Match: H3JS74_9STRA (Plastid division protein FtsZ n=1 Tax=Chaetoceros neogracilis TaxID=240364 RepID=H3JS74_9STRA) HSP 1 Score: 137 bits (344), Expect = 5.780e-36 Identity = 66/97 (68.04%), Postives = 84/97 (86.60%), Query Frame = 1
Query: 1 QVIGVGGGGGNAVNRMVQTGITGVEFWSLNTDAQALSRNLAPGKLAIGQSITRGLGAGGVPTVGRKAAEESMDDLRLVVQGADMVFVTCGMGGGTGA 291
+VIGVGGGGGNAVNRM+QT I GV FW++NTD+QAL ++LAP +L IG+ ITRGLGAGG+P+VG KAA E+++D+ + QGADMVF+T GMGGGTG+
Sbjct: 134 KVIGVGGGGGNAVNRMIQTRIEGVSFWAVNTDSQALDKSLAPNRLNIGRQITRGLGAGGIPSVGEKAALENVNDMTHICQGADMVFITAGMGGGTGS 230
BLAST of mRNA_H-elongata_contig73522.15042.1 vs. uniprot
Match: A0A7C3KHD6_9CYAN (Cell division protein FtsZ n=1 Tax=Oscillatoriales cyanobacterium SpSt-418 TaxID=2282169 RepID=A0A7C3KHD6_9CYAN) HSP 1 Score: 135 bits (339), Expect = 7.220e-36 Identity = 64/96 (66.67%), Postives = 83/96 (86.46%), Query Frame = 1
Query: 1 QVIGVGGGGGNAVNRMVQTGITGVEFWSLNTDAQALSRNLAPGKLAIGQSITRGLGAGGVPTVGRKAAEESMDDLRLVVQGADMVFVTCGMGGGTG 288
+VIGVGGGGGNAVNRM+ + +TGVEFWS+NTDAQ+LS+ AP +L +GQ +TRGLGAGG P++G+KAAEES D++ ++GAD+VF+T GMGGGTG
Sbjct: 69 KVIGVGGGGGNAVNRMIASSLTGVEFWSINTDAQSLSQAGAPNRLQMGQKLTRGLGAGGNPSIGQKAAEESRDEIAAALEGADLVFITAGMGGGTG 164 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig73522.15042.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig73522.15042.1 >prot_H-elongata_contig73522.15042.1 ID=prot_H-elongata_contig73522.15042.1|Name=mRNA_H-elongata_contig73522.15042.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=97bp QVIGVGGGGGNAVNRMVQTGITGVEFWSLNTDAQALSRNLAPGKLAIGQSback to top mRNA from alignment at H-elongata_contig73522:153..3102- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig73522.15042.1 ID=mRNA_H-elongata_contig73522.15042.1|Name=mRNA_H-elongata_contig73522.15042.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2950bp|location=Sequence derived from alignment at H-elongata_contig73522:153..3102- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig73522:153..3102- >mRNA_H-elongata_contig73522.15042.1 ID=mRNA_H-elongata_contig73522.15042.1|Name=mRNA_H-elongata_contig73522.15042.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=582bp|location=Sequence derived from alignment at H-elongata_contig73522:153..3102- (Himanthalia elongata Himel1 dioecious)back to top |