mRNA_H-elongata_contig7348.15036.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig7348.15036.1
Unique NamemRNA_H-elongata_contig7348.15036.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig7348.15036.1 vs. uniprot
Match: D7FNI3_ECTSI (Clathrin assembly complex, medium subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNI3_ECTSI)

HSP 1 Score: 538 bits (1386), Expect = 1.490e-190
Identity = 256/282 (90.78%), Postives = 273/282 (96.81%), Query Frame = 1
Query:    1 KSNVSDVLPDGTVSSMPWRKTGVKYSQNEVYLDIVEEVDAIVGVNGQIVSSEVSGAIQANSRLSGIPDMLLVFLDPSVIDDCSFHPCVRYGRFEKDRVVSFVPPDGHFELMRYRVRDHLQMNVIPPVFCNPTISYEDDYGSSQGHIHLNVGHRHGSSIKFAPRKGSMVIEEVVISVQFPKVVRTADLHVTLGTCLFDEALKIAKWNLGKLFKDKSATMTGTMSIQGPKPEESPPVQLSWKVPMASVSGLAITSLQIFHEKYRPYKGVRTMTKSGKNFQVRTG 846
            KSNVSDVLPDGTVS+MPWRK GVKYSQNEVYLDI+EE+DAI+ VNGQIVSSEVSG IQANSRLSGIPDMLLVF DPSVIDDCSFHPCVRYGRFEKDRVVSFVPPDGHFELMRYRVRDHLQMNV PPV+CNPTISYEDDYGSSQGHIH+ VGHRHGSS+KF PRKGSMV+E+V ++VQFPKVVRTADLHV+ GTCLFDEALK+AKWNLGKLFKDKSATMTGT+SIQGPKPEESPPVQLSWKVPMASVSGLAITSLQ+F+EKYRPYKGVRT+TKSGKNFQVRTG
Sbjct:  151 KSNVSDVLPDGTVSAMPWRKAGVKYSQNEVYLDIIEELDAILNVNGQIVSSEVSGTIQANSRLSGIPDMLLVFQDPSVIDDCSFHPCVRYGRFEKDRVVSFVPPDGHFELMRYRVRDHLQMNVTPPVYCNPTISYEDDYGSSQGHIHIAVGHRHGSSLKFPPRKGSMVVEDVTVTVQFPKVVRTADLHVSSGTCLFDEALKVAKWNLGKLFKDKSATMTGTLSIQGPKPEESPPVQLSWKVPMASVSGLAITSLQVFNEKYRPYKGVRTLTKSGKNFQVRTG 432          
BLAST of mRNA_H-elongata_contig7348.15036.1 vs. uniprot
Match: A0A7S2GKZ3_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GKZ3_9STRA)

HSP 1 Score: 369 bits (948), Expect = 4.320e-124
Identity = 176/281 (62.63%), Postives = 219/281 (77.94%), Query Frame = 1
Query:    1 KSNVSDVLPDGTVSSMPWRKTGVKYSQNEVYLDIVEEVDAIVGVNGQIVSSEVSGAIQANSRLSGIPDMLLVFLDPSVIDDCSFHPCVRYGRFEKDRVVSFVPPDGHFELMRYRVRDHLQMNVIPPVFCNPTISYEDDYGSSQGHIHLNVGHRHGSSIKFAPRKGSMVIEEVVISVQFPKVVRTADLHVTLGTCLFDEALKIAKWNLGKLFKDKSATMTGTMSIQGPKPEESPPVQLSWKVPMASVSGLAITSLQIFHEKYRPYKGVRTMTKSGKNFQVRT 843
            KS +S+ LPDGT+S MPWRK GVKY+QNE+Y+DI+EEVDAIV  NGQIVSSEV+G +QANSRLSGIPD+ + F+DP VIDDCSFHPCVRY RFE+DRVVSFVPPDG FELMRYRV    + NV  P+FC   ++   +  S  G I + VG +  SS+   P+KG+M+IE+V +++ FPK V+T +L   +GTCL+DEA K+AKW +GKL   KS  +TGT+ + G K EESPP+QL WKVPMASVSG+AI SLQ+ +E+YRPYKGVR  T+SGK FQVRT
Sbjct:  150 KSGISEELPDGTISMMPWRKAGVKYAQNEIYMDIIEEVDAIVDKNGQIVSSEVTGYVQANSRLSGIPDLTMTFVDPDVIDDCSFHPCVRYNRFERDRVVSFVPPDGQFELMRYRVST--KANVAAPIFCQSQLNLNGETNSGNGRISITVGQKPMSSLIMPPKKGTMLIEDVALTIPFPKGVKTTNLTANVGTCLYDEATKVAKWTIGKLSTSKSPQLTGTLVLHGTKLEESPPIQLKWKVPMASVSGIAIASLQLTNERYRPYKGVRATTRSGK-FQVRT 427          
BLAST of mRNA_H-elongata_contig7348.15036.1 vs. uniprot
Match: F0YKX1_AURAN (MHD domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YKX1_AURAN)

HSP 1 Score: 361 bits (926), Expect = 9.610e-121
Identity = 176/282 (62.41%), Postives = 226/282 (80.14%), Query Frame = 1
Query:    1 KSNVSDVLPDGTVSSMPWRKTGVKYSQNEVYLDIVEEVDAIVGVNGQIVSSEVSGAIQANSRLSGIPDMLLVFLDPSVIDDCSFHPCVRYGRFEKDRVVSFVPPDGHFELMRYRVRDHLQMNVIPPVFCNPTISYEDDYGSSQGHIHLNVGHRHGSSIKFAPRKGSMVIEEVVISVQFPKVVRTADLHVTLGTCLFDEALKIAKWNLGKLFK--DKSATMTGTMSIQGPKPEESPPVQLSWKVPMASVSGLAITSLQIFHEKYRPYKGVRTMTKSGKNFQVR 840
            +SNVSDVLPDGT+SSMPWRK+GVKY+QN++YLDIVEEVDAIV  NGQ+VSSEV+GAI ANSRLSGIPD+ L F+DP VIDDCSFHPCVRY RFE+DRVVSFVPPDG FELMRYRV  + + NV  P++  P+++  D++ +  G I + +G +  SS+    RKGS++IE+V +S+ FPK V+TA L  TLGT L+DEA K+AKW +GKL    ++   +TG+M IQG   EE PP+Q++WKVP+AS+SG+ I +LQ+ +E+YRPYKGVRT+TKSG+ FQVR
Sbjct:  150 RSNVSDVLPDGTISSMPWRKSGVKYAQNDIYLDIVEEVDAIVDRNGQVVSSEVTGAIMANSRLSGIPDLCLSFVDPEVIDDCSFHPCVRYNRFERDRVVSFVPPDGAFELMRYRV--NTKANVSAPIYVTPSVTMSDEHNAGHGRIQIQIGQKQTSSLVIPNRKGSLLIEDVTLSIPFPKCVKTATLSATLGTVLYDEATKVAKWTVGKLAVTGNRVPQLTGSMVIQGAL-EELPPIQVTWKVPIASISGIQIAALQLTNERYRPYKGVRTITKSGR-FQVR 427          
BLAST of mRNA_H-elongata_contig7348.15036.1 vs. uniprot
Match: A0A7S2SCM0_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SCM0_9STRA)

HSP 1 Score: 357 bits (915), Expect = 2.740e-119
Identity = 174/282 (61.70%), Postives = 222/282 (78.72%), Query Frame = 1
Query:    1 KSNVSDVLPDGTVSSMPWRKTGVKYSQNEVYLDIVEEVDAIVGVNGQIVSSEVSGAIQANSRLSGIPDMLLVFLDPSVIDDCSFHPCVRYGRFEKDRVVSFVPPDGHFELMRYRVRDHLQMNVIPPVFCNPTISYEDDYGSSQGHIHLNVGHRHGSSIKFAPRKGSMVIEEVVISVQFPKVVRTADLHVTLGTCLFDEALKIAKWNLGKLFKDKSATMTGTMSIQGP-KPEESPPVQLSWKVPMASVSGLAITSLQIFHEKYRPYKGVRTMTKSGKNFQVRT 843
            KS +++ LPDGT+SSMPWRK GVKY+QNE+YLDIVEEVDAIV  NGQ+VS+EV+G +QANSRLSGIPD+ L F DP VIDDCSFHPCVRY RFE+DRVVSFVPPDG FELMRYRV  + + +V  P++C   + YED   SS G +++ VG R   S+    +KGS+V+EEV +++ FPKVV+T +L V  G  L+DEA K+AKW +GK+   K+  ++GTM +QG  K EE+PP+QL WKVP AS+SG+AI+SLQ+ +EKYRPYKGVRT+ +SGK +QVRT
Sbjct:  136 KSGITEELPDGTISSMPWRKAGVKYAQNEIYLDIVEEVDAIVDRNGQVVSTEVTGVVQANSRLSGIPDLTLTFEDPEVIDDCSFHPCVRYTRFERDRVVSFVPPDGQFELMRYRV--NTKAHVSAPIYCQSQVLYED--ASSYGRVNITVGQRPTGSLIVPAKKGSLVVEEVCLTIPFPKVVKTTNLSVNYGAILYDEATKVAKWTIGKMPTSKTPQLSGTMVLQGQQKLEENPPIQLDWKVPTASISGIAISSLQLTNEKYRPYKGVRTIIRSGK-YQVRT 412          
BLAST of mRNA_H-elongata_contig7348.15036.1 vs. uniprot
Match: A0A8J2SXB1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SXB1_9STRA)

HSP 1 Score: 347 bits (889), Expect = 5.800e-115
Identity = 172/282 (60.99%), Postives = 217/282 (76.95%), Query Frame = 1
Query:    1 KSNVSDVLPDGTVSSMPWRKTGVKYSQNEVYLDIVEEVDAIVGVNGQIVSSEVSGAIQANSRLSGIPDMLLVFLDPSVIDDCSFHPCVRYGRFEKDRVVSFVPPDGHFELMRYRVRDHLQMNVIPPVFCNPTISYEDDYGSSQGHIHLNVGHRHGSSIKFAPRKGSMVIEEVVISVQFPKVVRTADLHVTLGTCLFDEALKIAKWNLGKLFKD--KSATMTGTMSIQGPKPEESPPVQLSWKVPMASVSGLAITSLQIFHEKYRPYKGVRTMTKSGKNFQVR 840
            KSNVSDVLPDGT+SSMPWRK+GVKY+QNE+YLDI+EEVDA+V   GQ+VSSEVSGAI ANSRLSGIPD+ L FLDP VI DCSFHPCVRY RFE+DRVVSFVPPDG FELMRYRV  + + NV  P++  P ++  D + +  G I + +G R  SS+    RK  M+IE+V +S+ FPK V+TA L  T+GT L+DEA K+A W +G+L  +  K   ++G+M IQG   E  PP+Q+ WKVP+ASVSG+ I +LQ+ +E+YRPYKGVRT+TKSG+ FQ+R
Sbjct:  163 KSNVSDVLPDGTISSMPWRKSGVKYAQNEIYLDIIEEVDAVVDRKGQVVSSEVSGAIVANSRLSGIPDLCLSFLDPEVIKDCSFHPCVRYTRFEQDRVVSFVPPDGTFELMRYRV--NTKTNVTVPIYVTPVVTMSDQHNAGYGRIQIQIGQRQTSSLVTPNRKAPMLIEDVALSIPFPKCVKTATLSATVGTVLYDEATKVASWTIGRLTPNATKVPQLSGSMIIQG-LAEGPPPIQVKWKVPVASVSGIQIAALQLKNERYRPYKGVRTITKSGR-FQIR 440          
BLAST of mRNA_H-elongata_contig7348.15036.1 vs. uniprot
Match: I2CP32_NANGC (AP-3 complex subunit mu n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CP32_NANGC)

HSP 1 Score: 343 bits (881), Expect = 7.090e-114
Identity = 166/283 (58.66%), Postives = 217/283 (76.68%), Query Frame = 1
Query:    4 SNVSDVLPDGTVSSMPWRKTGVKYSQNEVYLDIVEEVDAIVGVNGQIVSSEVSGAIQANSRLSGIPDMLLVFLDPSVIDDCSFHPCVRYGRFEKDRVVSFVPPDGHFELMRYRVRDHLQMNVIPPVFCNPTISYED---DYGSSQGHIHLNVGHRHGSSIKFAPRKGSMVIEEVVISVQFPKVVRTADLHVTLGTCLFDEALKIAKWNLGKLFKDKSATMTGTMSIQGPKPEESPPVQLSWKVPMASVSGLAITSLQIFHEKYRPYKGVRTMTKSGKNFQVRT 843
            S VS++LPDGTVS+MPWRK+GVKY+QNE+YLDIVEE+DAIV  +GQ+VS+EVSG I ANSRLSGIPD+ L+F+DP VIDDCSFHPCVRY RFE+DR VSFVPPDGHFELMRYRV    +  ++PP++C   I Y     D G S G + L +G +   S+    +  S+  E+V +++ FPK VRT  L    GT L+DEA K+A+W +GK+ ++++  +TGT+ + G +PEESP +Q+ WKVPMASVSGL + SLQ+ +E+YRPYKGVRT+TKSG+ FQVR+
Sbjct:  152 SGVSNLLPDGTVSNMPWRKSGVKYNQNEIYLDIVEEMDAIVDCSGQVVSAEVSGFIFANSRLSGIPDLSLLFVDPDVIDDCSFHPCVRYNRFERDRTVSFVPPDGHFELMRYRVTP--RQTLVPPIYCTAQIVYSSAGKDDGVSSGRLTLTLGCKPVHSLILNNKGKSLSFEDVKVTIPFPKAVRTTHLQTNTGTVLYDEASKVARWTVGKMSRERNPQLTGTILLAGGRPEESPSIQVDWKVPMASVSGLTVLSLQLLNERYRPYKGVRTITKSGR-FQVRS 431          
BLAST of mRNA_H-elongata_contig7348.15036.1 vs. uniprot
Match: A0A835YUG2_9STRA (Mu homology domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUG2_9STRA)

HSP 1 Score: 336 bits (862), Expect = 1.120e-110
Identity = 169/303 (55.78%), Postives = 223/303 (73.60%), Query Frame = 1
Query:   10 VSDVLPDGTVSSMPWRKTGVKYSQNEVYLDIVEEVDAIVGVNGQIVSSEVSGAIQANSRLSGIPDMLLVFLDPSVIDDCSFHPCVRYGRFEKDRVVSFVPPDGHFELMRYRVRD---HL--QMNVIPPVFCNPTISYEDD---------------YGSSQGHIHLNVGHRHGSSIKFAPRKGSMVIEEVVISVQFPKVVRTADLHVTLGTCLFDEALKIAKWNLGKLFK----DKSATMTGTMSIQ-GPKPEESPPVQLSWKVPMASVSGLAITSLQIFHEKYRPYKGVRTMTKSGKNFQVRT 843
            +S+ LPDGT+S+MPWRK GV+Y+QNE+YLDI+EEVDAIV  NGQ+VSSEV+G+IQA S LSGIPD+LL F DPS+IDDCSFHPCVRYGRFE+DRVVSFVPPDG FELMRYRV     H+  + N+IPP++CN T+S+ D                       +H+ +G R  +S++F  RK + ++E+V ++V FP+ VRTA+L  T GT LFDEA K+A+W++GKL       +   M G + +Q G + EESP + ++WKVP+AS+SGL+I SLQ+ +E+Y+PYKGVRT+TKSGK F VRT
Sbjct:  154 ISEALPDGTISAMPWRKAGVRYAQNEIYLDIIEEVDAIVAANGQVVSSEVTGSIQAVSHLSGIPDLLLTFQDPSLIDDCSFHPCVRYGRFERDRVVSFVPPDGAFELMRYRVATGAHHILPRGNIIPPLYCNATVSFSDGAXXXXXXXXXXXXXXXXXXXXRVHVGLGTRAPNSLRFPGRKTASMLEDVEVTVPFPRAVRTANLSATAGTVLFDEAAKVARWSVGKLAMGSVGQRPPQMAGALVLQPGARLEESPSIHVAWKVPVASISGLSIASLQLTNERYKPYKGVRTLTKSGK-FTVRT 455          
BLAST of mRNA_H-elongata_contig7348.15036.1 vs. uniprot
Match: A0A7S2KC76_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KC76_9STRA)

HSP 1 Score: 335 bits (860), Expect = 1.650e-110
Identity = 165/283 (58.30%), Postives = 215/283 (75.97%), Query Frame = 1
Query:   10 VSDVLPDGTVSSMPWRKTGVKYSQNEVYLDIVEEVDAIVGVNGQIVSSEVSGAIQANSRLSGIPDMLLVFLDPSVIDDCSFHPCVRYGRFEKDRVVSFVPPDGHFELMRYRVRDHLQMNVIPPVFCNPTISYEDDYGSS----QGHIHLNVGHRHGSSIKFAPRKGSMVIEEVVISVQFPKVVRTADLHVTLGTCLFDEALKIAKWNLGKLFKDKSATMTGTMSI--QGPKPEESPPVQLSWKVPMASVSGLAITSLQIFHEKYRPYKGVRTMTKSGKNFQVR 840
            V++ LP+GTVS+MPWRK GVKYS NE+Y+DI+EEVDAIV VNG+I+SS+VSG+IQA S LSG+PD++L F DP VIDDCSFHPCVRY R+E DRV+SFVP DG+FELMRYRVR+  Q+ V PP+FC P  ++ D  GSS     G + + +G +  SS+      GS  +E VV+++ FPKV+RTA+L   LG  L+DE+ K AKW +GKL + K   +TGTM +   G +PEE+PP+QL WK+P+ASVSGLA++ L +  E YRPYKGVRT+TKSG+ +QVR
Sbjct:  166 VAETLPNGTVSNMPWRKAGVKYSHNEIYIDIIEEVDAIVDVNGRIISSDVSGSIQAQSHLSGVPDLMLTFKDPDVIDDCSFHPCVRYNRYEHDRVISFVPADGNFELMRYRVRNGSQL-VNPPIFCTPQFNFGDYNGSSGGAVDGSLSVTIGMKPISSL--IKTSGSFSVENVVVTIPFPKVIRTANLTANLGKVLYDESAKTAKWTIGKLDERKKMVLTGTMILTKDGKRPEENPPLQLDWKIPLASVSGLAVSGLSLTGESYRPYKGVRTITKSGR-YQVR 444          
BLAST of mRNA_H-elongata_contig7348.15036.1 vs. uniprot
Match: A0A2P4WXI1_9STRA (p-3 complex subunit mu n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4WXI1_9STRA)

HSP 1 Score: 311 bits (798), Expect = 8.030e-103
Identity = 154/284 (54.23%), Postives = 209/284 (73.59%), Query Frame = 1
Query:    1 KSNVSDVLPDGTVSSMPWRKTGVKYSQNEVYLDIVEEVDAIVGVNGQIVSSEVSGAIQANSRLSGIPDMLLVFLDPSVIDDCSFHPCVRYGRFEKDRVVSFVPPDGHFELMRYRVRDHLQMNVIPPVFCNPTISYEDDYGSSQGHIHLNVGHRHGSSIKFAPRKGSMVIEEVVISVQFPKVVRTADLHVTLGTCLFDEALKIAKWNLGKLFKDK-SATMTGTMSIQ--GPKPEESPPVQLSWKVPMASVSGLAITSLQIFHEKYRPYKGVRTMTKSGKNFQVRT 843
            KS VS+ LPDG +S++PWRK+GV+Y+QNE+Y DIVEE+DAI+ V G+++S EV+G I +NSRLSG+PD+ +VF DPSVIDDCSFHPCVRY R+E++RV+SFVPPDG FELM+YRV+      ++PPV+C P I+Y D  G   G + L +G R G     +  K ++ +E+V + V FPK VRT D++   GTCLFDEA K  KWN+GKL K   + ++ G + +      P+E P V L +KVPM++VSGL + +L I +EKY+PYKGVRTMTK+G+ FQ+RT
Sbjct:   49 KSRVSNTLPDGAISNIPWRKSGVRYTQNEIYFDIVEEIDAIIDVTGRMISCEVNGVIHSNSRLSGVPDLTMVFTDPSVIDDCSFHPCVRYSRYERERVISFVPPDGQFELMQYRVQ---VQELVPPVYCQPQITYNDKGG---GTLDLTIGTR-GMPTLNSNAKKNLQVEDVTVEVTFPKSVRTVDVNTEYGTCLFDEASKTVKWNVGKLGKKVVNPSLRGNIILHQSAAVPDEKPVVLLGFKVPMSTVSGLNVETLLITNEKYKPYKGVRTMTKAGR-FQIRT 324          
BLAST of mRNA_H-elongata_contig7348.15036.1 vs. uniprot
Match: H3G7T8_PHYRM (MHD domain-containing protein n=28 Tax=Peronosporaceae TaxID=4777 RepID=H3G7T8_PHYRM)

HSP 1 Score: 314 bits (805), Expect = 1.210e-102
Identity = 156/284 (54.93%), Postives = 211/284 (74.30%), Query Frame = 1
Query:    1 KSNVSDVLPDGTVSSMPWRKTGVKYSQNEVYLDIVEEVDAIVGVNGQIVSSEVSGAIQANSRLSGIPDMLLVFLDPSVIDDCSFHPCVRYGRFEKDRVVSFVPPDGHFELMRYRVRDHLQMNVIPPVFCNPTISYEDDYGSSQGHIHLNVGHRHGSSIKFAPRKGSMVIEEVVISVQFPKVVRTADLHVTLGTCLFDEALKIAKWNLGKLFKDK-SATMTGTMSIQ--GPKPEESPPVQLSWKVPMASVSGLAITSLQIFHEKYRPYKGVRTMTKSGKNFQVRT 843
            KS VS+ LPDG +S++PWRK+GV+Y+QNE+Y DIVEE+DAI+ V+G+++S EV+GAI +NSRLSG+PD+ +VF DPSVIDDCSFHPCVRY R+E++RV+SFVPPDG FELM+YRV+      ++PPV+C P I+Y D  G   G + L +G R G     +  K ++ +EEV + V FPK VRT D++   GTCLFDE  K  KWN+GKL K   + ++ G + +      P+E P VQL +KVPM++VSGL + +L I +EKY+PYKGVRTMTK+G+ FQ+RT
Sbjct:  138 KSRVSNTLPDGAISNIPWRKSGVRYTQNEIYFDIVEEIDAIIDVSGRMISCEVNGAIHSNSRLSGVPDLTMVFTDPSVIDDCSFHPCVRYSRYERERVISFVPPDGQFELMQYRVQ---VQELVPPVYCQPQITYNDKGG---GTLDLVIGTR-GMPTLNSNAKKNLQVEEVTVEVTFPKSVRTVDVNTESGTCLFDETSKTVKWNVGKLGKKVLNPSLRGNIILHQSAAVPDEKPVVQLGFKVPMSTVSGLNVETLLITNEKYKPYKGVRTMTKAGR-FQIRT 413          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig7348.15036.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FNI3_ECTSI1.490e-19090.78Clathrin assembly complex, medium subunit n=1 Tax=... [more]
A0A7S2GKZ3_9STRA4.320e-12462.63Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
F0YKX1_AURAN9.610e-12162.41MHD domain-containing protein n=1 Tax=Aureococcus ... [more]
A0A7S2SCM0_9STRA2.740e-11961.70Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
A0A8J2SXB1_9STRA5.800e-11560.99Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
I2CP32_NANGC7.090e-11458.66AP-3 complex subunit mu n=1 Tax=Nannochloropsis ga... [more]
A0A835YUG2_9STRA1.120e-11055.78Mu homology domain-containing protein n=1 Tax=Trib... [more]
A0A7S2KC76_9STRA1.650e-11058.30Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A2P4WXI1_9STRA8.030e-10354.23p-3 complex subunit mu n=1 Tax=Phytophthora palmiv... [more]
H3G7T8_PHYRM1.210e-10254.93MHD domain-containing protein n=28 Tax=Peronospora... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig7348contigH-elongata_contig7348:7074..10207 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score537.3
Seed ortholog evalue4.2e-150
Seed eggNOG ortholog2880.D7FNI3
Preferred nameAP3M2
KEGG koko:K12398,ko:K17969
KEGG Pathwayko04137,ko04139,ko04142,map04137,map04139,map04142
GOsGO:0000323,GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005764,GO:0005768,GO:0005773,GO:0006605,GO:0006622,GO:0006623,GO:0006725,GO:0006726,GO:0006727,GO:0006807,GO:0006810,GO:0006886,GO:0006887,GO:0006897,GO:0006907,GO:0006928,GO:0006950,GO:0006996,GO:0007017,GO:0007018,GO:0007032,GO:0007033,GO:0007034,GO:0007040,GO:0007041,GO:0007154,GO:0007220,GO:0007275,GO:0007568,GO:0008055,GO:0008088,GO:0008089,GO:0008104,GO:0008150,GO:0008152,GO:0008340,GO:0008565,GO:0009058,GO:0009267,GO:0009605,GO:0009606,GO:0009628,GO:0009629,GO:0009630,GO:0009987,GO:0009991,GO:0010256,GO:0010259,GO:0010876,GO:0010970,GO:0012505,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0016050,GO:0016192,GO:0017016,GO:0017137,GO:0018130,GO:0019438,GO:0019538,GO:0019748,GO:0019899,GO:0019915,GO:0030117,GO:0030119,GO:0030123,GO:0030705,GO:0031201,GO:0031267,GO:0031410,GO:0031667,GO:0031668,GO:0031669,GO:0031982,GO:0032501,GO:0032502,GO:0032940,GO:0032991,GO:0033036,GO:0033060,GO:0033365,GO:0033554,GO:0034613,GO:0042440,GO:0042441,GO:0042594,GO:0042886,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043324,GO:0043473,GO:0043474,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044424,GO:0044425,GO:0044444,GO:0044464,GO:0044550,GO:0045184,GO:0046148,GO:0046152,GO:0046158,GO:0046483,GO:0046903,GO:0046907,GO:0047496,GO:0048066,GO:0048069,GO:0048475,GO:0048489,GO:0048490,GO:0048856,GO:0050896,GO:0051020,GO:0051179,GO:0051234,GO:0051235,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0051716,GO:0061462,GO:0065007,GO:0065008,GO:0070727,GO:0071496,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0072384,GO:0072594,GO:0072665,GO:0072666,GO:0080171,GO:0097479,GO:0097480,GO:0097708,GO:0098657,GO:0098796,GO:0098930,GO:0099003,GO:0099111,GO:0099514,GO:0099517,GO:0099518,GO:1901360,GO:1901362,GO:1901564,GO:1901576
EggNOG free text desc.anterograde synaptic vesicle transport
EggNOG OGsKOG2740@1,KOG2740@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03029,ko04131
Hectar predicted targeting categoryother localisation
Exons7
Model size849
Cds size849
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931138.0142295-CDS-H-elongata_contig7348:7073..72021622931138.0142295-CDS-H-elongata_contig7348:7073..7202Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7348 7074..7202 -
1691679714.1054537-CDS-H-elongata_contig7348:7073..72021691679714.1054537-CDS-H-elongata_contig7348:7073..7202Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7348 7074..7202 -
1622931138.0307715-CDS-H-elongata_contig7348:7542..76591622931138.0307715-CDS-H-elongata_contig7348:7542..7659Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7348 7543..7659 -
1691679714.121366-CDS-H-elongata_contig7348:7542..76591691679714.121366-CDS-H-elongata_contig7348:7542..7659Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7348 7543..7659 -
1622931138.0452228-CDS-H-elongata_contig7348:7895..79851622931138.0452228-CDS-H-elongata_contig7348:7895..7985Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7348 7896..7985 -
1691679714.1321814-CDS-H-elongata_contig7348:7895..79851691679714.1321814-CDS-H-elongata_contig7348:7895..7985Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7348 7896..7985 -
1622931138.0616057-CDS-H-elongata_contig7348:8455..85721622931138.0616057-CDS-H-elongata_contig7348:8455..8572Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7348 8456..8572 -
1691679714.1425638-CDS-H-elongata_contig7348:8455..85721691679714.1425638-CDS-H-elongata_contig7348:8455..8572Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7348 8456..8572 -
1622931138.0807498-CDS-H-elongata_contig7348:9009..91741622931138.0807498-CDS-H-elongata_contig7348:9009..9174Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7348 9010..9174 -
1691679714.1524405-CDS-H-elongata_contig7348:9009..91741691679714.1524405-CDS-H-elongata_contig7348:9009..9174Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7348 9010..9174 -
1622931138.0954795-CDS-H-elongata_contig7348:9779..98691622931138.0954795-CDS-H-elongata_contig7348:9779..9869Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7348 9780..9869 -
1691679714.1623054-CDS-H-elongata_contig7348:9779..98691691679714.1623054-CDS-H-elongata_contig7348:9779..9869Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7348 9780..9869 -
1622931138.1114712-CDS-H-elongata_contig7348:10066..102071622931138.1114712-CDS-H-elongata_contig7348:10066..10207Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7348 10067..10207 -
1691679714.1755602-CDS-H-elongata_contig7348:10066..102071691679714.1755602-CDS-H-elongata_contig7348:10066..10207Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7348 10067..10207 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig7348.15036.1prot_H-elongata_contig7348.15036.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig7348 7074..10207 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig7348.15036.1

>prot_H-elongata_contig7348.15036.1 ID=prot_H-elongata_contig7348.15036.1|Name=mRNA_H-elongata_contig7348.15036.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=283bp
KSNVSDVLPDGTVSSMPWRKTGVKYSQNEVYLDIVEEVDAIVGVNGQIVS
SEVSGAIQANSRLSGIPDMLLVFLDPSVIDDCSFHPCVRYGRFEKDRVVS
FVPPDGHFELMRYRVRDHLQMNVIPPVFCNPTISYEDDYGSSQGHIHLNV
GHRHGSSIKFAPRKGSMVIEEVVISVQFPKVVRTADLHVTLGTCLFDEAL
KIAKWNLGKLFKDKSATMTGTMSIQGPKPEESPPVQLSWKVPMASVSGLA
ITSLQIFHEKYRPYKGVRTMTKSGKNFQVRTG*
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mRNA from alignment at H-elongata_contig7348:7074..10207-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig7348.15036.1 ID=mRNA_H-elongata_contig7348.15036.1|Name=mRNA_H-elongata_contig7348.15036.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3134bp|location=Sequence derived from alignment at H-elongata_contig7348:7074..10207- (Himanthalia elongata Himel1 dioecious)
AAGAGCAACGTGTCCGACGTGCTCCCCGACGGGACTGTGTCGTCCATGCC GTGGAGAAAAACGGGCGTGAAGTACTCCCAGAACGAGGTGTATCTGGACA TCGTTGAAGAGGTGGACGCCATCGTAGGAGTGAACGGGCAGGTGTGAGTC ATCGCGGACGCTTCTACCGCTTCAAGTGATCGGGTGATCTCAAGAAAATG AAGGATGCAGAAAGAACGCGGATCGTGGGCCTTCGTCGCGGTGTTCTTCT TCGGTGTTCTTTGGTGTTTCTCCATGACGACCGTTTTTTGCGATTCGCCT GTTTCATTGTCTCTCGCGCGCGCTCCTCCCGTTCACAGATCGTTTCCTCC GAGGTGTCGGGAGCGATCCAGGCGAACTCGCGGCTAAGCGGAATCCCTGA CATGCTCTTGGTTTTCCTGGACCCCTCGGTGAAAAGAAAAATGCAAAGCG ATACAAATCGATAAAAGGCGATGCTGCGCTCCACGAAATGGACGCGAAAT AAGTTGGAAGCTTTTCTTAAAGGCAGTTGGTGATGGTATGGTGGTGGTGG TGACACATTTAGCAGTATAGTACAGTACAGTATAGTATCGAGTAAGATCA ACCGGATGTGGTTGCCTTCTGCTCGTGGTCAGCTGAACAGGGAAAAAAAT GTTTCCCCCTATCTCCGTAGAAAACGGAGATATGATTATTGCTCCCCAGA CAGCAATGTGCCGAGCCATGCGCGCCGCTAAATTTTGTGGTTAAAAAACG TGCATCAGAACCTCCCTACCATGAGCTGATGGCTGAAACCCCCCTTGAAA GGCCTTGTGAGGAACACACTCTTTAGGCGGAAGCTTGAATAATTTTGACC ACGTTATACCATACCTCATTCTAAAGATTTTCGAACAGACATGGAAGAGT CAAATTTGTCCCACTTTTCTCCCACCTCCCATGTGCGCCTTCCCCCATTT TTCTTCCTCTTTACACTTTTCCTCCTTCTATTTTGTTTTAACGATTTTTT TCCTTCCTGCTTGATTTACGGGCTCGCGAGCAGGTAATCGACGACTGCTC GTTCCACCCGTGCGTGCGGTATGGCCGTTTTGAGAAAGATCGGGTGGTAA GCTTCGTGCCCCCAGACGGACACTTCGAGCTCATGCGATACCGCGTTCGA GATCACTTGCAGATGAACGTTATACCTCCGGTATTCTGTAATCCGACGGT GAGATGCGCTCCCGCCGCCGTTCGATGGATTTCGAGGTGGACAGGAATAC CTATAAATAGGGGGCCTCTTTTTCCGGGACGATGCTCGTTTTTACTGTGC ATCGCGCGAAGTTTGGTTGATTGGTTGGTTTGTGAAAGAACTCCCTTTTT TGTATATGTGTGTGTGTCTAGTATGCGACCTTGTGGAGCGCGCATTATCG CATCCAATTTTACCGTTTCGGAGTTCGGAGTTATGCTTTCTCGTGTCTTC TCCGGGCTCTTTTGAGAAAGACACTACCCCGCTTCATCCGACCCTTCTCT CTTATCCCCCGCCCATTTTCCTTCCCGCACATGAGGAGATAATGACCGTC GAAACGATGTCGTTAACCGCACATCCTGATCGCGCGCTATTTTCCGCCTC AACGTGCCCCTCGCATCATTTCACACGATAAAAAGATATCCTATGAGGAC GACTACGGCTCCAGCCAGGGTCACATCCATCTAAACGTTGGGCACAGGCA CGGCTCTTCGATCAAGTTTGCTCCGCGAAAAGGTTCGATGGTCATCGAGG AGGTGAGAGTCGTAGGAAGCGTGTCGTTGGAGTTGCCAAAAAGGGAATAG GCTTTAAGAGCCCGCAGAGCGTCGGGCACATCAAACCTGAATGTCTCAGG ATATATGATAATACAACGTATAGTCTGTTCTGTGTTGTTTGGGTGAAAGT TGGGAGTGAAGAAGCCCTTACAAGAGGGACTGAGCCCGCGCGCTCCCGCG TTCGCGTCCCGCCGCCTCTTCGTGTATTTCGTACGCTTGCGGGTAGAATG GAAACCCGTTAAGATTTGCAACAGCCTAAATATTCTGCGGAACGTTCGCC CCTCAGCTGAGCGCCGTCCACGGTGACAACACGCGCTGTCATTGATTGAT TTGGCTGGTGAGCATGTATGTCTGACGCCGTTCGACGCCTTGTGGCGCGC ACCACTACACGCTTTCGCTGATTCGCGCCTCGTGACGTCACGGTGTTGAT GGGCGCGCCCGATCCTGCGCAGGTGGTGATCAGCGTGCAGTTCCCGAAAG TCGTGAGAACAGCCGACTTGCACGTTACTTTGGGAACGTGTCTCTTCGAT GAGGCGCTGAAGGTGTGAGATCAGCTCAAGTGCCCCCCCCCCACTCTTCC TACTGCCGTGCGCTTTTGCGTGATACTAGCTTTGGTCTGGTTAGCGCTTT GCAGTTTTGCGACGGCAACCATCTCTTACGAGAGCAGACAAATGGCGCGT TACTGTGCAATCTGCGAGTAAGGTTTGGTCGGGTGCTCGGGACCATTTTG CGATATCATCTCCTTTGCTTGCCTTTTATTGTTTGTCCTCGGTAATAGAT TGCGAAGTGGAACCTCGGGAAGTTATTCAAGGACAAGTCTGCCACCATGA CGGGGACCATGAGCATCCAGGGGCCCAAACCAGAGGAGAGCCCACCCGTA CAATTATCGTGGAAGGTGCTGCACAACTGGTATTGCCAGCACACCCTTTT GACTATGGGGTGTTCATCCTGTGCTTGAATGGGTTAAGGGAGTAGAGGAT GACAAACCACTGTCCCCTTGCTGGTCTTGCTGGTCTTGCTTTTGGTCTTC CGCAGACAACATTCCGTGATGCTCAGAGTCTACGGCCTAACATATGGGGA AGAAGAAGAAGAAGAAAAACATCGGAGTATTAGTTTTCTTTGATCGCCCA ACGTGCGATTGATCGATCAGAGCATGTTCTGGTGTGCCGTGCCCATGCTT GTCCGGCTGTTGTTTGCTCTCATTTCCCACCCCCCTCTCATTTACCACCC CCCAGGTACCCATGGCTTCGGTGTCGGGGCTAGCGATCACGTCGCTCCAG ATCTTCCACGAGAAGTATCGCCCGTACAAGGGTGTGCGAACGATGACCAA GTCGGGCAAGAACTTTCAAGTGCGAACGGGCTGA
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Coding sequence (CDS) from alignment at H-elongata_contig7348:7074..10207-

>mRNA_H-elongata_contig7348.15036.1 ID=mRNA_H-elongata_contig7348.15036.1|Name=mRNA_H-elongata_contig7348.15036.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1698bp|location=Sequence derived from alignment at H-elongata_contig7348:7074..10207- (Himanthalia elongata Himel1 dioecious)
AAGAGCAACGTGTCCGACGTGCTCCCCGACGGGACTGTGTCGTCCATGCC
GTGGAGAAAAACGGGCGTGAAGTACTCCCAGAACGAGGTGTATCTGGACA
TCGTTGAAGAGGTGGACGCCATCGTAGGAGTGAACGGGCAGAAGAGCAAC
GTGTCCGACGTGCTCCCCGACGGGACTGTGTCGTCCATGCCGTGGAGAAA
AACGGGCGTGAAGTACTCCCAGAACGAGGTGTATCTGGACATCGTTGAAG
AGGTGGACGCCATCGTAGGAGTGAACGGGCAGATCGTTTCCTCCGAGGTG
TCGGGAGCGATCCAGGCGAACTCGCGGCTAAGCGGAATCCCTGACATGCT
CTTGGTTTTCCTGGACCCCTCGATCGTTTCCTCCGAGGTGTCGGGAGCGA
TCCAGGCGAACTCGCGGCTAAGCGGAATCCCTGACATGCTCTTGGTTTTC
CTGGACCCCTCGGTAATCGACGACTGCTCGTTCCACCCGTGCGTGCGGTA
TGGCCGTTTTGAGAAAGATCGGGTGGTAAGCTTCGTGCCCCCAGACGGAC
ACTTCGAGCTCATGCGATACCGCGTTCGAGATCACTTGCAGATGAACGTT
ATACCTCCGGTATTCTGTAATCCGACGGTAATCGACGACTGCTCGTTCCA
CCCGTGCGTGCGGTATGGCCGTTTTGAGAAAGATCGGGTGGTAAGCTTCG
TGCCCCCAGACGGACACTTCGAGCTCATGCGATACCGCGTTCGAGATCAC
TTGCAGATGAACGTTATACCTCCGGTATTCTGTAATCCGACGATATCCTA
TGAGGACGACTACGGCTCCAGCCAGGGTCACATCCATCTAAACGTTGGGC
ACAGGCACGGCTCTTCGATCAAGTTTGCTCCGCGAAAAGGTTCGATGGTC
ATCGAGGAGATATCCTATGAGGACGACTACGGCTCCAGCCAGGGTCACAT
CCATCTAAACGTTGGGCACAGGCACGGCTCTTCGATCAAGTTTGCTCCGC
GAAAAGGTTCGATGGTCATCGAGGAGGTGGTGATCAGCGTGCAGTTCCCG
AAAGTCGTGAGAACAGCCGACTTGCACGTTACTTTGGGAACGTGTCTCTT
CGATGAGGCGCTGAAGGTGGTGATCAGCGTGCAGTTCCCGAAAGTCGTGA
GAACAGCCGACTTGCACGTTACTTTGGGAACGTGTCTCTTCGATGAGGCG
CTGAAGATTGCGAAGTGGAACCTCGGGAAGTTATTCAAGGACAAGTCTGC
CACCATGACGGGGACCATGAGCATCCAGGGGCCCAAACCAGAGGAGAGCC
CACCCGTACAATTATCGTGGAAGATTGCGAAGTGGAACCTCGGGAAGTTA
TTCAAGGACAAGTCTGCCACCATGACGGGGACCATGAGCATCCAGGGGCC
CAAACCAGAGGAGAGCCCACCCGTACAATTATCGTGGAAGGTACCCATGG
CTTCGGTGTCGGGGCTAGCGATCACGTCGCTCCAGATCTTCCACGAGAAG
TATCGCCCGTACAAGGGTGTGCGAACGATGACCAAGTCGGGCAAGAACTT
TCAAGTGCGAACGGGCTGAGTACCCATGGCTTCGGTGTCGGGGCTAGCGA
TCACGTCGCTCCAGATCTTCCACGAGAAGTATCGCCCGTACAAGGGTGTG
CGAACGATGACCAAGTCGGGCAAGAACTTTCAAGTGCGAACGGGCTGA
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