mRNA_H-elongata_contig73318.15018.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig73318.15018.1 vs. uniprot
Match: D7FX88_ECTSI (PLCXc domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FX88_ECTSI) HSP 1 Score: 397 bits (1019), Expect = 5.730e-135 Identity = 193/310 (62.26%), Postives = 239/310 (77.10%), Query Frame = 1
Query: 1 CGTTGGCATTETCNDEDYAGGCDTPLQYVCEHQLPGLNVCESPPLTTMLPCWMSSLSDGLSLTEISIPGTHDTMSKGSSACLQGGSTNYVHTQAWSLRTMLDAGVRALDIRLRHVDD-SFILEHGIVELPYAFDEDVRDVLKTFLSENPTEVVLMFYQIHDLGPNTR----TPEESLQESLEAYPDLWIAGSVIPSLGEARGRVVLANNMPREEQNNYDLETLDGVSYKKDLIRDFFLEGGGASA-GDMFRVNYFSGSGIFVYPLTVAAGLRTVFQGTNEVLFEFAEGFLGIAMFDFIVEDAITHLVAQQ 912
CG TGGCAT +TC + C P YVCEHQLPGL+VCESPP+ +M PCWMS L L L +IS+PGTHDTMSKG SACLQ G NYVHTQAWSLRTMLD GVRA+D+R+R D S +LEHGIVELPY FD DVRDVL +FL++NPTE V+MFYQ++DL T E++LQ S+ YPDLW+ G+V+P+L EARG+ VL +M +EEQN+++L + + V+ KK L+RDFFLEGGG A G FR+NY SG+G +VYPLTVAAGL++V+QGTNEV+FEF+ G LG+ MFDF+ EDA+ H+VAQQ
Sbjct: 62 CGVTGGCATLDTCGSDSSDADCAAPDSYVCEHQLPGLSVCESPPVASMQPCWMSGLDGALRLNQISLPGTHDTMSKGISACLQEGQANYVHTQAWSLRTMLDTGVRAIDVRIRRKSDLSLVLEHGIVELPYGFDVDVRDVLASFLTDNPTETVVMFYQMNDLAGEDSSGGVTAEDTLQASMSQYPDLWLDGAVVPTLEEARGKAVLPTDMGQEEQNDFNLSSFEAVATKKGLVRDFFLEGGGVPADGGPFRLNYLSGTGTYVYPLTVAAGLKSVYQGTNEVVFEFSGGSLGVVMFDFVGEDAVAHVVAQQ 371
BLAST of mRNA_H-elongata_contig73318.15018.1 vs. uniprot
Match: UPI001F2D45DE (phosphatidylinositol-specific phospholipase C domain-containing protein n=1 Tax=Myxococcus stipitatus TaxID=83455 RepID=UPI001F2D45DE) HSP 1 Score: 130 bits (327), Expect = 1.480e-30 Identity = 96/272 (35.29%), Postives = 141/272 (51.84%), Query Frame = 1
Query: 133 LTTMLPCWMSSLSDGLSLTEISIPGTHDTMSKGSSACLQGGSTNYVHTQAWSLRTMLDAGVRALDIRLRHVDDSFILEHGIVELPYAFDEDVRDVLKTFLSENPTEVVLMFYQIHDLGPN-TRTPEESLQESLEAYPD-------LWIAGSVIPSLGEARGRVVLANNMPREE----------QNNYDLETLDGVSYKKDLIRDFFLEGGGASAGDMFRVNYFSGSGIFVYPLTVAAGLRTV---FQGTNEVLFEFAEGF----LGIAMFDF 873
+ T P WMS + G SL +S+PGTHDTM+ S GG + TQ+ LR+ LDAG+RALDIR RH+D++F + HG+V L FD+ +R ++ FL+ NPTE V+M + N TRT ++ EAY D LW GS +P+LGE RG++V+ ++ Q+++ + L + K +RD + G +F VN+ SGS YPL VA G+ + +G N+ + G G+ M DF
Sbjct: 27 IETSHPTWMSWVPGGTSLAALSLPGTHDTMAYQS----YGG--DLTQTQSLDLRSQLDAGIRALDIRCRHIDNAFTIHHGVVYLHVNFDDVLRTTIQ-FLNANPTETVVMRVKKEHTEENVTRT----FAQTFEAYRDQPAYSPYLW-RGSHVPTLGEVRGKIVILDDFAGGAYGIPWGAISLQDDWTVSQLADIDDKWFKVRDHLARTNTGAPGTLF-VNFLSGSSALAYPLHVAGGINILGVQTRGVNDYAIDHLVGGNVQRAGVMMMDF 285
BLAST of mRNA_H-elongata_contig73318.15018.1 vs. uniprot
Match: A0A511T7G9_MYXFU (1-phosphatidylinositol phosphodiesterase n=4 Tax=Myxococcus TaxID=32 RepID=A0A511T7G9_MYXFU) HSP 1 Score: 128 bits (321), Expect = 1.060e-29 Identity = 97/272 (35.66%), Postives = 144/272 (52.94%), Query Frame = 1
Query: 121 ESPPLTTMLPCWMSSLSDGLSLTEISIPGTHDTMSKGSSACLQGGSTNYVHTQAWSLRTMLDAGVRALDIRLRHVDDSFILEHGIVELPYAFDEDVRDVLKTFLSENPTEVVLM-FYQIHDLGPNTRTPEESLQ--ESLEAY-PDLWIAGSVIPSLGEARGRVVLANNMPR----------EEQNNYDLETLDGVSYKKDLIRDFFLEGGGASAGDMFRVNYFSGSGIFVYPLTVAAGLRTV---FQGTNEVLFEFAEGFL----GIAMFDF 873
+S + T P WMS +S+ SL +SIPGTHDTM+ S GGS TQ+ LR LDAGVRALDIR RH+ D F + HG+V L FD+ +R ++ FL++NPTE V+M + H TR+ ++ + AY P LW GS +P+LGE RGR+V+ ++ + Q+++ + L + K + +R G + +F VN+ SG+ +PL VA G+ + ++G N+ + G GI M DF
Sbjct: 33 DSGSIETTHPSWMSWVSNSTSLASLSIPGTHDTMAYQS----YGGSLT--QTQSLDLRKQLDAGVRALDIRCRHIGDRFTIHHGVVYLHVNFDDVLRTTIQ-FLNDNPTETVVMRVKREHTEEDITRSFSQTFEWYRDQPAYSPYLW-RGSHVPTLGEVRGRIVVLDDFAGGAYGIPWGALDLQDDWTVSQLADIDDKWNKVRAHLDRTQGGAPSKLF-VNFLSGASAMAHPLHVAGGINVLGIGYRGVNDFAIDHLVGGYAQRAGILMMDF 295
BLAST of mRNA_H-elongata_contig73318.15018.1 vs. uniprot
Match: A0A085WNG0_9DELT (1-phosphatidylinositol phosphodiesterase n=1 Tax=Hyalangium minutum TaxID=394096 RepID=A0A085WNG0_9DELT) HSP 1 Score: 127 bits (319), Expect = 1.150e-29 Identity = 102/284 (35.92%), Postives = 143/284 (50.35%), Query Frame = 1
Query: 133 LTTMLPCWMSSLSDGLSLTEISIPGTHDTMSKGSSACLQGGSTNYVHTQAWSLRTMLDAGVRALDIRLRHVDDSFILEHGIVELPYAFDEDVRDVLKTFLSENPTEVVLM-FYQIHDLGPNTRTPEESLQ--ESLEAY-PDLWIAGSVIPSLGEARGRVVL----------------ANNMPREEQNNYDLETLDGVSYKKDLIRDFFLEGGGASAGDMFRVNYFSGSGIF--VYPLTVAAGLRTVFQGTNEVLFEFAEGF----LGIAMFDFIVEDAITHLVA 906
+ T P WMS + +L +S+PGTHDTMS GG V TQ+ LRT L+AG+R LDIR RH+DD F + HG V FD DV FL E+PTE VLM Q H+ TR+ E+ S AY P LW G+ +PSL + RGR+V+ ++ + Q+ +++ + + K + R F+E SA M+ VN+ SGS VYP TVA+G +V++GTN+ E+ G+ M DF I ++A
Sbjct: 53 IETSHPDWMSWVPGQTNLAALSLPGTHDTMS------FHGGVL--VQTQSMPLRTQLEAGIRVLDIRCRHIDDRFTIHHGEVYQQANFD-DVLQATIQFLREHPTETVLMKVQQEHEAENTTRSFAETFAWYRSQSAYSPYLW-TGTYLPSLDQVRGRIVILQAFSGGSYGVRWPSDGSSASFDIQDEWEVTWVWNIPAKWEQARAQFMETNSGSASVMY-VNFLSGSSHTGGVYPYTVASGEGSVYRGTNDQALEYLVAGNVQRTGVVMMDFPGAGLIDAIIA 325
BLAST of mRNA_H-elongata_contig73318.15018.1 vs. uniprot
Match: UPI001A106EBD (Phosphatidylinositol-specific phospholipase C n=1 Tax=Calothrix sp. C42_A2020_038 TaxID=2774333 RepID=UPI001A106EBD) HSP 1 Score: 124 bits (311), Expect = 1.710e-29 Identity = 89/232 (38.36%), Postives = 129/232 (55.60%), Query Frame = 1
Query: 148 PCWMSSLSDGLSLTEISIPGTHDTMSKGSSACLQGGSTNYVHTQAWSLRTMLDAGVRALDIRLRHVDDSFILEHGIVELPYAFDEDVRDVLKT---FLSENPTEVVLMFYQIHDLGP--NTRTPEESLQESLEAYPD-LWIAGSVIPSLGEARGRVVLANNMPR-----------EEQNNYDLETLDGVSYKKDLIRDFFLEGGGASAGDMFRVNYFSGSGIFVYPLTVAAG 792
P WM+ + D +L+ +SIPGTHD+MS L GG + V TQ+ SL T L++G+R LDIR RH++DSF + HG+V FD DVLKT FL+ NP+E VLM + + P NTR+ EE+ ++ E Y +W S P LG+ RG++V+ + + Q+NY+L+T + K ++ + AS D F +NY SGSG +P VA+G
Sbjct: 48 PNWMAKIPDNRNLSSLSIPGTHDSMS------LHGG--DVVTTQSMSLATQLNSGIRVLDIRCRHINDSFAIHHGVVYQKANFD----DVLKTVADFLANNPSETVLMRVK-EEYKPQNNTRSFEETFKKYNEKYSKFIWAPTSQNPKLGDVRGKIVILQDFSASSQFGLQYNRFDSQDNYNLKTNWDLHQKWTYVKAH-INKANASNKDKFFINYLSGSG-GSFPYFVASG 264
BLAST of mRNA_H-elongata_contig73318.15018.1 vs. uniprot
Match: UPI001CCE2E8E (phosphatidylinositol-specific phospholipase C n=1 Tax=Cystobacter gracilis TaxID=394092 RepID=UPI001CCE2E8E) HSP 1 Score: 123 bits (308), Expect = 3.900e-28 Identity = 89/249 (35.74%), Postives = 135/249 (54.22%), Query Frame = 1
Query: 154 WMSSLSDGLSLTEISIPGTHDTMSKGSSACLQGGSTNYVHTQAWSLRTMLDAGVRALDIRLRHVDDSFILEHGIVELPYAFDEDVRDVLKTFLSENPTEVVLM-FYQIHDLGPNTRTPEESLQ--ESLEAYPDLWIAGSVIPSLGEARGRVVLA----------------NNMPREEQNNYDLETLDGVSYKKDLIRDFFLEGGGASAGDMFRVNYFSGSGIF--VYPLTVAAGLRTVFQGTNEVLFEF 837
WMS + + +L +SIPGTHDTMS GGS V TQ+ LRT LDAG+RALDIR RH+ D F + HG V FD+ +R ++ FL ++P+E VLM + +D NTR+ EE+ +S AY + G+ +P+L + RG++V+ +N + Q+ +++ L + K + I F + SA M+ VN+ SGS V+P TVA+G +V++G N+ E+
Sbjct: 60 WMSWIPNATNLAALSIPGTHDTMS------FHGGSL--VQTQSLPLRTQLDAGIRALDIRCRHIGDRFAIHHGSVYQHANFDDVLRTTIQ-FLKDHPSETVLMKVKEEYDAEGNTRSFEETFAWYQSQTAYKNFIWTGTTLPTLEQVRGKIVIVQAFGGGSYGVRWPSDGSNASFDVQDEWEVTWLWDIPTKWERILAQFEKTKSGSASVMY-VNFLSGSSSTGGVHPYTVASGEGSVYRGMNDQALEY 298
BLAST of mRNA_H-elongata_contig73318.15018.1 vs. uniprot
Match: A0A1D8TAE7_9NOCA (1-phosphatidylinositol phosphodiesterase n=2 Tax=Rhodococcus sp. WMMA185 TaxID=679318 RepID=A0A1D8TAE7_9NOCA) HSP 1 Score: 119 bits (297), Expect = 1.170e-27 Identity = 105/287 (36.59%), Postives = 138/287 (48.08%), Query Frame = 1
Query: 148 PCWMSSLSDGLSLTEISIPGTHDTMSKGSSACLQGGSTNYVHTQAWSLRTMLDAGVRALDIRLRHVDDSFILEHGIVELPYAFDEDVRDVLKTFLSENPTEVVLMFYQI-HDLGPNTRTPEESLQESLEAYPD--------LWIAGS----VIPSLGEARGRVVLANNM-------PR-----EEQNNYDLETLDGVSYKKDLIRDFFLEGGGASAGDMF--RVNYFSGSGIF-----VYPLTVAAGLRTV---FQGTNEVLFEFAEGFLGIAMFDF----IVEDAI 891
P WM L D + TE+S+PGTHDTM+ SA L G TQ + L T L+AG+R LDIR RH D F + HGI L F DV + FL ENP+E V M Q + NTR+ E++L + PD LW + IP LGE RG+VV+ N PR + Q++Y L +LD + K + +RD F + S MF +N SG + V P+TVA G R V T + L + G GI DF +VE+ I
Sbjct: 40 PDWMGDLPDSANPTELSLPGTHDTMAY--SASLIGA------TQDFDLATQLNAGIRVLDIRTRHYQDEFPIHHGIEYLQADF-ADVVSTVSEFLRENPSETVFMRMQKEYKDAENTRSYEDTLNWYIHDNPDTRDLLSEYLWTPPADYDGAIPDLGEIRGQVVILQNFSADGVYGPRWGRNMDIQDDYLLPSLDDIDTKWEKVRDQFEKAEQGSMQTMFVNGLNATSGEDLGAIIDGVLPMTVAKGTRNVTGIVPRTEDYLRDSGTGRTGIVFADFPSAALVEEVI 317
BLAST of mRNA_H-elongata_contig73318.15018.1 vs. uniprot
Match: UPI0013DD2904 (phosphatidylinositol-specific phospholipase C domain-containing protein n=1 Tax=Pyxidicoccus trucidator TaxID=2709662 RepID=UPI0013DD2904) HSP 1 Score: 122 bits (306), Expect = 1.220e-27 Identity = 89/265 (33.58%), Postives = 137/265 (51.70%), Query Frame = 1
Query: 133 LTTMLPCWMSSLSDGLSLTEISIPGTHDTMSKGSSACLQGGSTNYVHTQAWSLRTMLDAGVRALDIRLRHVDDSFILEHGIVELPYAFDEDVRDVLKTFLSENPTEVVLMFYQIHDLGPN-TRTPEESLQ---ESLEAYPDLWIAGSVIPSLGEARGRVVLANNM----------PREEQNNYDLETLDGVSYKKDLIRDFFLEGGGASAGDMFRVNYFSGSGIFVYPLTVAAGLRTVFQGTNEVLFEFAEGF----LGIAMFDF 873
+ T P WM + D SL +S+PGTHDTM+ ++ GG + TQ+ +LR LDAG+RALDIR RH+ D+F + HG+V L F DV + FLSE+P E ++M + N TRT ++ + E P +W GS +P+LGE RG++V+ ++ + Q+++ + TL + K + +R + S +F VN+ SGS +P VA G + +G N+ ++ G GI M DF
Sbjct: 42 IETSHPGWMGAFPDSTSLASVSLPGTHDTMAFTNT----GG--DLTQTQSLNLRAQLDAGIRALDIRCRHIGDAFTIHHGVVYLNVNFT-DVLNTATQFLSEHPRETLVMRVKKEHTEENITRTFAQTFEWYREQPAFKPYIW-RGSHVPTLGEVRGKLVILDDFGGGAYGIPWSSLDLQDDWTVSTLFDIDDKWNKVRAHLEKTNTGSPSKLF-VNFLSGSSAGAFPYMVAGGAGSGIRGVNDFAIDYLVGAKVQRAGIMMMDF 297
BLAST of mRNA_H-elongata_contig73318.15018.1 vs. uniprot
Match: UPI0009E30A81 (phosphatidylinositol-specific phospholipase C n=1 Tax=Allosalinactinospora lopnorensis TaxID=1352348 RepID=UPI0009E30A81) HSP 1 Score: 120 bits (301), Expect = 3.870e-27 Identity = 102/286 (35.66%), Postives = 137/286 (47.90%), Query Frame = 1
Query: 139 TMLPCWMSSLSDGLSLTEISIPGTHDTMSKGSSACLQGGSTNYVHTQAWSLRTMLDAGVRALDIRLRHVDDSFILEHGIVELPYAFDEDVRDVLKTFLSENPTEVVLM-FYQIHDLGPNTRTPEESLQESLEAYPD--------LWIAGSV---IPSLGEARGRVVLANNM--------PR------EEQNNYDLETLDGVSYKKDLIRDFFLEGGGASAGDMFRVNYFSGSGIFVYPLTVAAG---LRTVFQGTNEVLFEFAEGFLGIAMFDF----IVEDAITH 897
T P WMS + D L +SIPGTHDTM++ G T +TQ L L AG+RALDIR RH D F + HG V L F + +RD FL E+PTE VLM + + NTR+ E+L+ L PD LW G IP+LGEARG++VL + PR + Q+ Y + T+ + K R F E G+ + VN+ SG+G+ YP VA G LR V + LFE G+ M D+ +V+ + H
Sbjct: 58 TSHPDWMSLVPDDTDLAALSIPGTHDTMAR--------GVTPAANTQDSGLPEQLGAGIRALDIRARHHRDVFPIHHGRVYLNANFTDVLRDTTD-FLKEHPTETVLMRLKEEYRAEENTRSFAETLEWYLNDNPDTADLAREHLWSPGGDGRRIPTLGEARGKIVLLQDFNGDGAVYGPRWGGPAMDIQDEYRVPTIFDIDDKWHKARAHF-EKTGSGDSEALSVNFLSGAGVGAYPKEVARGVLGLRGVNDFALQYLFERNVSRTGVVMMDYPGAGLVDAVVAH 333
BLAST of mRNA_H-elongata_contig73318.15018.1 vs. uniprot
Match: A0A0H4WXD2_9DELT (1-phosphatidylinositol phosphodiesterase n=1 Tax=Myxococcus hansupus TaxID=1297742 RepID=A0A0H4WXD2_9DELT) HSP 1 Score: 120 bits (301), Expect = 5.800e-27 Identity = 85/252 (33.73%), Postives = 130/252 (51.59%), Query Frame = 1
Query: 121 ESPPLTTMLPCWMSSLSDGLSLTEISIPGTHDTMSKGSSACLQGGSTNYVHTQAWSLRTMLDAGVRALDIRLRHVDDSFILEHGIVELPYAFDEDVRDVLKTFLSENPTEVVLMFYQIHDLGPNTRTPEESLQESLEAY-------PDLWIAGSVIPSLGEARGRVVLANNM----------PREEQNNYDLETLDGVSYKKDLIRDFFLEGGGASAGDMFRVNYFSGSGIFVYPLTVAAGLRTV-FQGTNE 822
+S + T P WM+ + D L+ +S+PGTHDTM+ QG + TQ+ LR L+AGVRALDIR RH+ DSF + HG+V L FD+ +R ++ FL+ NP+E V+M + N S E+ AY P +W GS +PSLGE RG++V+ ++ Q+++ + TL + K + +R LE A VN+ SG+ +P +VA G ++ +G N+
Sbjct: 38 DSGSIETHHPNWMNWVPDSTRLSALSLPGTHDTMA------YQGYGGSLTQTQSLDLRKQLEAGVRALDIRCRHIADSFTIHHGVVYLHVNFDDVLRTTIQ-FLNANPSETVVMRVKKEHTEENVT---RSFAETYLAYRNNPAYRPYIW-TGSQVPSLGEVRGKIVILDDFGGGAYGIAWGSLNLQDDWTVSTLFDIGNKWNKVRAH-LERTNTGASSSLFVNFLSGASALAHPYSVAGGHSSMGIRGVND 277 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig73318.15018.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig73318.15018.1 >prot_H-elongata_contig73318.15018.1 ID=prot_H-elongata_contig73318.15018.1|Name=mRNA_H-elongata_contig73318.15018.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=304bp CGTTGGCATTETCNDEDYAGGCDTPLQYVCEHQLPGLNVCESPPLTTMLPback to top mRNA from alignment at H-elongata_contig73318:376..1684- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig73318.15018.1 ID=mRNA_H-elongata_contig73318.15018.1|Name=mRNA_H-elongata_contig73318.15018.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1309bp|location=Sequence derived from alignment at H-elongata_contig73318:376..1684- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig73318:376..1684- >mRNA_H-elongata_contig73318.15018.1 ID=mRNA_H-elongata_contig73318.15018.1|Name=mRNA_H-elongata_contig73318.15018.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1824bp|location=Sequence derived from alignment at H-elongata_contig73318:376..1684- (Himanthalia elongata Himel1 dioecious)back to top |