mRNA_H-elongata_contig733.15013.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig733.15013.1 vs. uniprot
Match: D7FWS4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWS4_ECTSI) HSP 1 Score: 369 bits (946), Expect = 3.990e-100 Identity = 240/607 (39.54%), Postives = 335/607 (55.19%), Query Frame = 2
Query: 2360 SIRKPSATLAFILISQLQFIATFSIVDWDTPGETSWLREFGSRLRWLNLWWPSTFAGDDAIGDGMSRRILALSFTYSWEGPGLFFSVGNIILVIGCFLCIFLLHLVVLSGLEAHWLLKKRAKAVWKAAKRRGIPESELRAQIYGKRIRKRLLPG-AKNDPEDKGSSLKSVTAGTLTSLSKPLVIYNMLQDDSVFDEEASEWKEHGDQEEGYVERYCVGQDTIDSIEKYRDKSTSAWVHFPHVELVFLFFAFEGFVAAQVAGFRQHGCLPISIISAVVLVLYPMLMFLSVCRTTLVRVCSNLVIEFRRFPQDDTHG-------GLTSRTNTGWRYDRSLFKWADKGRWYTVETSDEALRRKWNWFRIGFEPMFVGFTQSRAWFSVILLLQWTLLACVAVLINTSVIQLFLFCAIHLGAFIILVTLRPFANKVVDFIASLVAFTNALSMVLMASTDLAWIGTKWALEIEGTVVILHLFVLTVLVVPIYIDLVAGVMVAWSRKATSATNKTRPLVKQEETADDSAQAFARSFILHMWAKTWYSVVGQNILAYMKDIREGLRKP-YAVRTWEGSNICLDPLSRTAGEQS*-----RLKIGCVGTVSYVFIV 4138
S R+PSATLAF+L++QLQF+AT S+VD+ E SWL +F + LRW+NLWWP+ +G ++ A F G G VGN+ LVIG L IF +H+ +SG+EA WL KKRA+ AA+RRG P EL+A++ G RI R P A P + + S T TL EE S+ + + G V ++ + + R+ STSAW+HFPHVELVFLFFAFEG VA+ + R C I + +VLYP+LMF++V RT LVRV N+++ F+ + +D T+G GL SR + W + SLF WADKG+W TV+T D + R+ +WFRIGFEP+FV +T+ WF VI L++W A V V+I SV+QL LFC +H F IL+ L+PFAN V++ I + V +A+SM + A++ L W GT A + +VV+L L L LV+P+Y+D V VM A + A KT + EE A+ + RS+ W TW +++ N+ A +D EG+RKP + G LD + G + R VGT + IV
Sbjct: 1188 SNRRPSATLAFVLMTQLQFLATLSLVDY-VMDEDSWLADFVTGLRWINLWWPAE------VGQNIASDECA--FEAGASGIGALVFVGNLALVIGILLAIFFMHVAAVSGVEALWLTKKRARENLDAARRRGAPIGELQARLRGGRIICRTNPDLADPSPFARQAPQPSGTPSTLH-------------------EEESDMSDEEEGGRGLVP--MRSENRLSPVATCREHSTSAWLHFPHVELVFLFFAFEGAVASFASAIRNSECPEIFYTAIAAMVLYPLLMFVTVFRTLLVRVRPNVLLIFKTYAEDGTNGDAPSRAGGLLSRFKSSWAENYSLFSWADKGQWETVQTPDRQVSREGDWFRIGFEPVFVDYTKRGTWFIVISLVEWAAFAFVGVMIENSVVQLVLFCGLHSVMFFILMFLKPFANSVINNIEACVTAIDAISMGVFAASALWWEGTNRAAHLNTSVVVLQLLSLFALVIPVYLDAVTIVMGAIRNRIRKALGKTGHELTDEER---EARHYIRSYTRRQWCGTWCTMLRHNVFACARDTSEGVRKPRFTTAARSGPYPPLDRSKQAGGTEDGGGPPRRPSCNAVGTANTPVIV 1761
BLAST of mRNA_H-elongata_contig733.15013.1 vs. uniprot
Match: D8LLG6_ECTSI (Mucin-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLG6_ECTSI) HSP 1 Score: 352 bits (902), Expect = 3.420e-94 Identity = 223/571 (39.05%), Postives = 320/571 (56.04%), Query Frame = 2
Query: 2339 GVSAGSMSIRKPSATLAFILISQLQFIATFSIVDWDTPGETSWLREFGSRLRWLNLWWPSTFAGDDAIGDGMSRRILALSFTYSWEGPGLFFSVGNIILVIGCFLCIFLLHLVVLSGLEAHWLLKKRAKAVWKAAKRRGIPESELRAQIYGKRIRKRLLPGAKNDPEDKGSSLKSVTAGTLTSLSKPLVIYNMLQDDSVFDEEASEWKEHGDQEEGY--VERYCVGQDTIDSIEKYRDKSTSAWVHFPHVELVFLFFAFEGFVAAQVAGFRQHGCLPISIISAVVLVLYPMLMFLSVCRTTLVRVCSNLVIEFRRFPQDDTHG-------GLTSRTNTGWRYDRSLFKWADKGRWYTVETSDEALRRKWNWFRIGFEPMFVGFTQSRAWFSVILLLQWTLLACVAVLINTSVIQLFLFCAIHLGAFIILVTLRPFANKVVDFIASLVAFTNALSMVLMASTDLAWIGTKWALEIEGTVVILHLFVLTVLVVPIYIDLVAGVMVAWSRKATSATNKTRPLVKQEETADDSAQA--FARSFILHMWAKTWYSVVGQNILAYMKDIREGLRKPY 4018
G S +S R+PSATLAF+L++QLQF+A S+VD+ + SWL +F LRW+NLWWP+ G+D + DG F G VGN+ LV+G L IF LH+ V+SG EA WL KKRA+ A+RR P SEL A+ G R+ +R PG DP GS S +++D S + D+EEG + C ++ + + R+ STSAW+HFPHVELVFLFFAFEG VA+ + R C + + +VLYP+LMF +V RT VRV + ++ F+ + +D T+G G S + W + SLF WADKG+W TV+T + + R+ +WFRIGFEP+FV +T+ WF VI L++W +A V V+I+ S +QL LFC + F+ILV L+PFAN V++ I + + +A+S L+A L W GT A ++ V +L + L LV+P+Y+D V VM A + A KT Q++ +S +A + R+F W TW +++ N+ A +D REG+RKP+
Sbjct: 1369 GDSPSRVSHRRPSATLAFVLMTQLQFLAMLSLVDY-VVSQGSWLADFVVGLRWINLWWPAEI-GEDIVSDGCI-------FETGASEIGALVFVGNLALVLGILLAIFFLHVAVVSGAEALWLTKKRARENLDGARRRNTPISELLARFRGGRMIRRTNPGL-TDPSPFGSRNPS-----------------LVRDRS----------QRTDEEEGGRGLVPMC-SENQLSPVATCREHSTSAWLHFPHVELVFLFFAFEGAVASFASAIRNSECPEMFYTAIAAMVLYPLLMFATVVRTLFVRVRPDELLIFKTYDEDGTNGNAPNCRGGFLSHFKSSWAENYSLFSWADKGQWETVQTPNRNITREGDWFRIGFEPVFVDYTKRGTWFIVISLVEWASIALVGVMIDNSNVQLLLFCGLQSAMFLILVCLKPFANSVINGIGACIVAIDAVSTGLLAVAALKWEGTSRATDVNSAVGVLQIVSLCALVIPVYLDAVTIVMGAIRNRIRKALGKTG----QQQLKGESPEARDYIRTFTRRQWCGTWCAMLRHNVFACARDTREGVRKPH 1897
BLAST of mRNA_H-elongata_contig733.15013.1 vs. uniprot
Match: A0A6H5JD90_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD90_9PHAE) HSP 1 Score: 349 bits (896), Expect = 1.830e-93 Identity = 220/568 (38.73%), Postives = 316/568 (55.63%), Query Frame = 2
Query: 2339 GVSAGSMSIRKPSATLAFILISQLQFIATFSIVDWDTPGETSWLREFGSRLRWLNLWWPSTFAGDDAIGDGMSRRILALSFTYSWEGPGLFFSVGNIILVIGCFLCIFLLHLVVLSGLEAHWLLKKRAKAVWKAAKRRGIPESELRAQIYGKRIRKRLLPGAKNDPEDKGSSLKSVTAGTLTSLSKPLVIYNMLQDDSVFDEEASEWKEHGDQEEGYVERYCV-GQDTIDSIEKYRDKSTSAWVHFPHVELVFLFFAFEGFVAAQVAGFRQHGCLPISIISAVVLVLYPMLMFLSVCRTTLVRVCSNLVIEFRRFPQDDTHG-------GLTSRTNTGWRYDRSLFKWADKGRWYTVETSDEALRRKWNWFRIGFEPMFVGFTQSRAWFSVILLLQWTLLACVAVLINTSVIQLFLFCAIHLGAFIILVTLRPFANKVVDFIASLVAFTNALSMVLMASTDLAWIGTKWALEIEGTVVILHLFVLTVLVVPIYIDLVAGVMVAWSRKATSATNKTRPLVKQEETADDSAQAFARSFILHMWAKTWYSVVGQNILAYMKDIREGLRKPY 4018
G S +S R+PSATLAF+L++QLQF+A S+VD+ + SWL +F LRW+NLWWP+ G+D DG F G VGN+ LV+G L IF LH+ V+SG EA WL KKRA+ A+RR P SEL A+ G RI ++ PG DP S S +++D S + D+EEG E + ++ + + R+ STSAW+HFPHVELVFLFFAFEG VA+ + R C + + +VLYP+LMF +V RT VRV + ++ F+ + +D T+G G SR + W + SLF WADKG+W TV+T + + R+ +WFRIGFEP+FV +T+ WF VI L++W +A V V+I+ S +QL LFC + F+ILV L+PFAN V++ I + + +A+ L+A L W GT A ++ V +L + L LV+P+Y+D V VM A ++ A KT + E A+ + R+F W TW +++ N+ A +D R+G+RKP+
Sbjct: 1410 GDSPPRVSHRRPSATLAFVLMTQLQFLAMLSLVDY-VVSQGSWLADFVVGLRWINLWWPADI-GEDIASDGCI-------FETGASEIGALVFVGNLALVLGILLAIFFLHVAVVSGAEALWLTKKRARENLDGARRRNTPISELLARFRGGRIIRQTNPGL-TDPSPFASRNPS-----------------LVRDGS----------QRTDEEEGGRELVPMCSENRLSPVAMCREHSTSAWLHFPHVELVFLFFAFEGAVASFASAIRNSECPEMFYTAIAAMVLYPLLMFATVVRTLFVRVRPDELLIFKTYDEDGTNGNTPNGRGGFLSRFKSSWAENYSLFSWADKGQWETVQTPNRNITREGDWFRIGFEPVFVDYTKRGTWFIVISLVEWASIALVGVMIDNSYVQLLLFCGLQSAMFLILVCLKPFANSVINGIGACIVAIDAVCTGLLAVAALKWEGTSRATDVNSAVGVLQIVSLCALVIPVYLDAVTIVMGAIRKRIRKALGKTGQQLTGESP---EARDYIRTFTRRQWCGTWCAMLRHNVFACARDTRDGVRKPH 1937
BLAST of mRNA_H-elongata_contig733.15013.1 vs. uniprot
Match: D8LN93_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN93_ECTSI) HSP 1 Score: 337 bits (865), Expect = 4.410e-91 Identity = 222/612 (36.27%), Postives = 314/612 (51.31%), Query Frame = 2
Query: 2378 ATLAFILISQLQFIATFSIVDWDTPGETSWLREFGSRLRWLNLWWPSTFAGD--DAIGDGMSRRILALSFTY-----SWEGP----GLFFSVGNIILVIGCFLCIFLLHLVVLSGLEAHWLLKKRAKAVWKAAKRRGIPESELRAQIYGKRIRKRLLPGAKNDPEDKG--------------------SSLKSVTAGTLTSLSKPLVI---------------------YNMLQDDSVFDEEASEWKEHGDQEEGYVERYCVGQDTIDSIEKYRDKSTSAWVHFPHVELVFLFFAFEGFVAAQVAGFRQHGCLPISIISAVVLVLYPMLMFLSVCRTTLVRVCSNLVIEFRRFPQDDTHG--------------GLTSRTNTGWRYDRSLFKWADKGRWYTVETSDEALRRKWNWFRIGFEPMFVGFTQSRAWFSVILLLQWTLLACVAVLINTSVIQLFLFCAIHLGAFIILVTLRPFANKVVDFIASLVAFTNALSMVLMASTDLAWIGTKWALEIEGTVVILHLFVLTVLVVPIYIDLVAGVMVAWSRKATSATNKTRPLVKQEETADDSAQAFARSFILHMWAKTWYSVVGQNILAYMKDIREGLRKP 4015
A L + ++QLQF+AT S+VD DT GE S L F RW NLW P++FA + D +G RR+ SW+G G +GN LV G + IFLLH+ ++SG+EA+WL KKRAK A+R G+ E + + P + D G S L + G+ L K + DD++ + S++ E G G + R + + + + R+ S SAW+HFPHVELVFLFFA+EG VA+QV+ R+ GC P+ I + + LV YP+LMF++V RT VRV N +I F DD G S+ GW D SLF WA+KG W T ET +E RR+ WFRIGFEP+FV FT+S AWF L++W L C+ LI+ SV+QL LFCA+H +F++LV RPFAN V++ + + + +A+ M L+A + W GT A +++ V++L LF L L++PIYID ++ A + +T T V+ E A+ F R FI W +TW +++G+NI A D REG+R P
Sbjct: 758 AILGAVAVTQLQFLATLSLVD-DTGGEDSSLPGFADSFRWANLWPPASFAEEFIDTSDEGQQRRLXXXXXXXXXXGCSWDGSLGGLGSLVFIGNQGLVFGALVLIFLLHVSLVSGVEAYWLAKKRAKEEAARARRLGVSIGEYFSDTHVDGREHEQAPVPEPDARPSGGTTDISVASSFRRRRLRRDPSLLNAAATGSQRRLEKLPALDAPHRSRKVRDGSWVAEDGEKKEARSDDNLSGTDCSDYDEEGGGGLGTLTR---AESRLSPVAECREHSRSAWLHFPHVELVFLFFAYEGAVASQVSALREAGCPPVMIAAGLALVFYPILMFVAVLRTFFVRVRPNTLIVFTPKEADDDTGDAGDAEEGQRARSASFLSKVRAGWEEDHSLFAWANKGTWETAETDNEGTRREGQWFRIGFEPLFVDFTKSGAWFVAFTLVEWAALGCIGALIDESVLQLSLFCALHTLSFLLLVVFRPFANSVINAMGAGLVGIDAVCMALLAVSASRWEGTAAAGKVDSVVMLLQLFALCALIIPIYIDTSLILIGAIRSRLQKSTTTTPQHVRTE--AEKEEDLFVRHFIRRSWPRTWCTMLGKNIFACASDTREGIRPP 1363
BLAST of mRNA_H-elongata_contig733.15013.1 vs. uniprot
Match: A0A6H5JR60_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR60_9PHAE) HSP 1 Score: 319 bits (818), Expect = 1.280e-89 Identity = 224/631 (35.50%), Postives = 326/631 (51.66%), Query Frame = 2
Query: 2249 SFLGVTLSHEAGAPMVANSAGGTHQRLQQPGVSAGSMSIRKPSATLAFILISQLQFIATFSIVDWDTPGETSWLREFGSRLRWLNLWWPS----TFAGDDAIGDGMSRRILALSFTYSWEGPGLFFSVGNIILVIGCFLCIFLLHLVVLSGLEAHWLLKKRAKAVWKAAKRRGIPESELRAQIYGKRIRKRLLPGAKNDPEDKGSSLKSVTAGTLTSLSKPLVIYNMLQDDSVFDEEASEWKEHGDQEEGYVERYCV-GQDTIDSIEKYRDKSTSAWVHFPHVELVFLFFAFEGFVAAQVAGFRQHGCLPISIISAVVLVLYPMLMFLSVCRTTLVRVCSNLVIEFRRFPQDDTHG-------GLTSRTNTGWRYDRSLFKWADKGRWYTVETSDEALRRKWNWFRIGFEPMFVGFTQSRAWFSVILLLQWTLLACVAVLINTSVIQLFLFCAIHLGAFIILVTLRPFANKVVDFIASLVAFTNALSMVLMASTDLAWIGTKWALEIEGTVVILHLFVLTVLVVPIYIDLVAGVMVAWSRKATSATNKTRPLVKQEETADDSAQAFARSFILHMWAKTWYSVVGQNILAYMKDIREGLRKP-YAVRTWEGSNICLDPLSRTAGEQS*RLKI 4102
SFLG ++ A + A GT +R P S R+PSATL F+L++QLQF+AT S+VD+ E SWL +F + LRW+NLWW + A D++ + + I AL F VGN+ LV G L IF +H+ +SG+EA WL KK A+ AA+RRG P EL+A++ G RI R P DP S +GTL++L++ E + D+EEG R + ++ ++ + R+ STSAW+HFPHVELVF FFAFEG VA+ + R + C I + +VL P+LMF++V RT LVRV N+++ F+ + + T G G SR + W + SLF WADK +W T +T D + R+ +W RIGFEP+FV +T+ WF VI L++W LA V V++ S++QL LFC + F+IL+ L+PFAN V + I + V +A+SM + A++ L W GT A + +VV+L L L +E A D + RS+ W TW +V+G N+ A +D EG+RKP + G LD + G + +++
Sbjct: 176 SFLGAPVAFRARSVDALAPADGTAERENPP-----PASNRRPSATLTFVLMTQLQFLATLSLVDY-VMDEDSWLADFVTGLRWINLWWLAEVGQNIASDESAFEAGASGIRALVF------------VGNVALVKGILLAIFFIHVAAVSGVEALWLTKKPARENLDAARRRGAPIGELQARLRGVRIICRTNPDLA-DPSP-FSRQAPHASGTLSTLNE-------------------EESDMSDEEEGGRGRVPMRSENRLNPVATCREHSTSAWLHFPHVELVFQFFAFEGAVASFASAIRNYECPKIFYTAIAAMVLCPLLMFVTVFRTLLVRVRPNVLLIFKTYAEGGTSGDAPSRAGGFLSRFKSSWEENYSLFSWADKRQWETAQTPDRQISREGDWCRIGFEPVFVEYTKRGTWFIVISLVEWVALALVGVMVENSIVQLVLFCGLPSVIFLILMFLKPFANSVTNNIEACVTAIDAISMGVFAASALWWEGTDRAAHLNTSVVVLQLL---------------------------------SLFDEEREARD----YIRSYTRRQWCGTWCTVLGHNVFACARDTSEGVRKPRFTTAARSGPYPPLDRSKQAGGTEDNGIRV 730
BLAST of mRNA_H-elongata_contig733.15013.1 vs. uniprot
Match: A0A6H5J9C2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9C2_9PHAE) HSP 1 Score: 305 bits (780), Expect = 6.740e-85 Identity = 223/655 (34.05%), Postives = 351/655 (53.59%), Query Frame = 2
Query: 2132 SPDGVTLDQ---TVSPITTPTFVS--QSVATGTVTI---AAVGGIAASFLGVTLSHEAGAPMVANSAGGTHQRLQQPGVSAGSMSIRKPSATLAFILISQLQFIATFSIVDWDTPGETSWLREFGSRLRWLNLWWPSTFAGDDAIGDGMSRRIL----------------ALSFTYSWEGPGLFFSVGNIILVIGCFLCIFLLHLVVLSGLEAHWLLKKRAKAVWKAAKRRGIPESELRAQIYGKRIRKRLLPGAKNDPEDKGSSLKSVTAGTLTSLSKPLVIYNMLQDDSVFDEEASEWKEHGDQEEGYVERYCVGQDTIDSIEKYRDKSTSAWVHFPHVELVFLFFAFEGFVAAQVAGFRQHGCLPISIISAVVLVLYPMLMFLSVCRTTLVRVCSNLVIEFRRFPQDDTHGG---LTSRTNTGWRYDRSLFKWADKGRWYTVETSDEALRRKWNWFRIGFEPMFVGFTQSRAWFSVILLLQWTLLACVAVLINTSVIQLFLFCAIHLGAFIILVTLRPFANKVVDFIASLVAFTNALSMVLMASTDLAWIGTKWALEIEGTVVILHLFVLTVLVVPIYIDLVAGVMVAWSRKATSATNKTRPLVKQEETADDSAQAFARSFILHMWAKTWYSVVGQNILAYMKDIREGLRKP 4015
SP+ V++ + T +P PT V+ Q VA ++ A+V G+ S + VT+ A + MVA GGT Q Q + R PSAT+AF+L SQ+QF+AT S VD T E S + + LRW+NLW PS ++ +G++ RI+ A+S T + L F GN+ L G + IF H++V S +EA+W+ K+RA+ V + RRG+ SE+ + G ++ D GSS S ++G + S + ++ +V + + K D+EEG G +I + R+ S S W+H+PH+EL+FLFFAFEG V +Q+A R I + LVLYP+LM + V RT V V + +I F ++ G SRT +G + D SLF WADKG+W TV+T+++ RRK +WFRIGFEP+F FTQ+ +WF + L++ +LA +AVL++ S +Q LFCA+H F++LV +PFAN V++ +A++V T+A+ M ++A + GT A ++ V+++ + VLV+P+Y+D + N+ + ++E AD + + + L +W + W+ +V N+ A ++D REG+R P
Sbjct: 67 SPEAVSIGERGFTAAPTMAPTLVAEVQEVAVSAASVMSTASVVGVMTSTV-VTVLGGASSSMVA---GGTAQAATQS-------TCRSPSATMAFVLTSQIQFLATLSFVD-TTGAEESAFSDLTNNLRWVNLW-PS-----ESFSEGIASRIISDEPDQPSDEDDTTPSAISQTVTSNVGSLLFM-GNLALFSGLLVIIFTSHVLVASVVEAYWVAKQRARKVISRSLRRGLSLSEIPIALSG--------TWSQQPTMDDGSSAGSQSSGIMQSPQR-------MERQAVSPYDGGDSK--SDEEEGGPRNTRPGN-SIGQVSDCRELSQSPWLHYPHLELIFLFFAFEGAVTSQMAALRSANSSTILYAAVATLVLYPLLMVVMVARTHRVWVQPDALIVFASSETEEALAGKPSTLSRTVSGLKNDFSLFSWADKGQWETVQTANDKARRKADWFRIGFEPLFADFTQAGSWFIIYTLIECAVLASIAVLVDNSAMQFLLFCAMHSLTFVLLVGWKPFANSVLNAVAAMVMLTDAVCMGMLALAAGTFNGTATAARMDTAVMVIQALCIAVLVIPLYVDTAVSIY-------GMIRNRKGSVDERENEADRAEREVTKRLTLRLWGRAWFRMVFSNMFACLRDTREGIRGP 677
BLAST of mRNA_H-elongata_contig733.15013.1 vs. uniprot
Match: D7G1L9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1L9_ECTSI) HSP 1 Score: 298 bits (763), Expect = 1.250e-83 Identity = 211/606 (34.82%), Postives = 321/606 (52.97%), Query Frame = 2
Query: 2315 THQRLQQPGVSAGS-----MSIRKPSATLAFILISQLQFIATFSIVDWDTPGETSWLREFGSRLRWLNLWWPS----TFA-GDDAIGDGMSRRILALSFTYSWEGPGLFFSVGNIILVIGCFLCIFLLHLVVLSGLEAHWLLKKRAKAVWKAAKRRGIPESELRAQIYGKRIRKRLLPGAKNDPEDKGSSLKSVTAGTLTSLSKPLVIYNMLQDDSVFDEEASEWKEHGDQEEGYVERYCVGQDTIDSIEKYRDKSTSAWVHFPHVELVFLFFAFEGFVAAQVAGFRQHGCLPISIISAVVLVLYPMLMFLSVCRTTLVRVCSNLVIEFRRFPQDDTHG-------GLTSRTNTGWRYDRSLFKWADKGRWYTVETSDEALRRKWNWFRIGFEPMFVGFTQSRAWFSVILLLQWTLLACVAVLINTSVIQLFLFCAIHLGAFIILVTLRPFANKVVDFIASLVAFTNALSMVLMASTDLAWIGTKWALEIEGTVVILHLFVLTVLVVPIYIDLVAGVMVAWSRKATSAT-NKTRPLVKQEETADDSAQAFARSFILHMWAKTWYSVVGQNILAYMKDIREGLRK--PYAVRTWEGSNICLDPLSRT 4072
TH + GV + +S+R PS T+A +L++Q+QF+AT S+VD T E S L E LRW+NLW P TF+ G + + R + T + + L F +GNI L L I ++H+V++S +EA+WL K+RA A+RRGIP L A+ + R P A++DP++ +S + A + + V + D EE + + + R +S+S W++FPH+EL+FL FAFEG +A+Q+A R GC + + LV+YP+LM + RT VRV + +I F+ +++ HG S+ TG + D S+F WA+ G W TVET DE R+ + FRIGFEP+FV FT+ +WF+V LL+ T +AC AVL++ SV+QLFLFC +H +F++LV RPFAN +++ + + + +A SM ++A T W T A ++ VV+L L L L++P+YID ++ A K S T + T + EE A + + F R +I W TW ++G N+LA + D G R+ A RT N ++RT
Sbjct: 24 THASMPPQGVLGAASVQPHVSVRAPSVTIAVLLLTQIQFLATLSLVD-STGAEDSLLSELTQNLRWVNLWPPDSVGRTFSSGGERLFQQDGSRACGIEPTSASDIGALVF-LGNIGLFTSLLLGIVVIHIVLVSAVEAYWLSKERAMEELTKAQRRGIPIRGLGAR---RASRVAHSPDAESDPDELAASASNDGAMSREHAAADSVDVGV------------------DFEEDGIPIRSRPKGLRAMLADCRYRSSSVWLYFPHIELLFLLFAFEGAMASQLATMRGGGCPWVFYSACASLVVYPVLMIILSYRTHRVRVAPDTLIVFKPVGEEENHGTDGTVPRSFLSKVRTGLKEDHSMFAWANTGAWETVETPDEETVREGDQFRIGFEPLFVDFTKKASWFTVYFLLEMTGIACTAVLVDDSVVQLFLFCGLHSLSFLLLVIFRPFANSIINTMGACLTLIDAASMAMLADTAHRWQRTSRAKRMDTAVVVLQLVALVALIIPMYIDASTVILGAIREKIRSLTKSNTCDDGRTEEEAKEERK-FIRGYIFRAWGPTWCRMLGSNVLACVADTTRGTRRVNTSAARTGPQRNADAPVVART 605
BLAST of mRNA_H-elongata_contig733.15013.1 vs. uniprot
Match: A0A6H5JTJ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTJ3_9PHAE) HSP 1 Score: 276 bits (707), Expect = 2.510e-71 Identity = 208/600 (34.67%), Postives = 309/600 (51.50%), Query Frame = 2
Query: 2339 GVSAGSMSIRKPSATLAFILISQLQFIATFSIVDWDTPGETSWLREFGSRLRWLNLW-----------W-------PSTFAGDDAIGDGMSRRILALSFTYSWEGPGLFFSVGNIILVIGCFLCIFLLHLVVLSGLEAHWLLKKRAKAVWKAAKRRGIPESELRAQIYGKRIRKRLLPGAKNDPEDKGSSLKSVTAGTLTSLSKPLVIYNMLQDDSVFDEEASEWKEHGDQEEGYVERYCVGQ----DTIDSIEKYRDKSTSAWVHFPHVELVFLFFAFEGFVAAQVAGFRQHGCLPISIISAVVLV--------LYPMLMFLSVCRTTLVRVCSNLVIEFRRFPQDDTHGG---LTSRTNTGWRYDRSLFKWADKGRWYTVETSDEALRRKWNWFRIGFEPMFVGFTQSRAWFSVILLLQWTLLACVAVLINTSVIQLFLFCAIHLGAFIILVTLRPFANKVVDFIASLVAFTNALSMVLMASTDLAWIGTKWALEIEGTVVILHLFVLTVLVVPIYIDLVAGVMVAWSRKATSATNKTRPLVKQEETADDSAQAFARSFI----LHMWAKTWYSVVGQNILAYMKDIREGLRKPYAVR 4027
G +A + R PS+T+A +L SQ+QF+AT S VD DT E S L LRW+NLW W P++ DD+ DG S + +S+T + G F +GN+ L G F+ IF +H+++ S +EA+WL K+RA R IP R L G D GSS + +GT S L+ + L W G + V+ +I + + R+ S SAW+H+PH+ELVFLFFAFEG V +QV+ R + + L +L F+ VRV S+ +I F D+ G L S+ TG + D SLF WADKG W TV+T+DE RR +WFRIGFEP++ FTQ+ +WF+V L++W LAC+AVL++ S +Q LFCA+H FI+LV +PFAN V++ + ++V T+A+ M ++A + + T A I+ V++ + VLVVP+Y+D +++ W + N+ P+ +T D++AQ R FI L +W +TW+++VG N+ A ++D REG+R P R
Sbjct: 89 GQAATQSTFRNPSSTMALVLTSQIQFLATLSFVD-DTGVEGSALSGLTKNLRWVNLWPSQSFSEGVASWVLCNEPEPTSGEDDDSEEDGDSTQ-RGISWTVISD-VGSFLFMGNLALFAGFFVIIFSVHILLASAVEAYWLAKQRA--------RNEIP---------------RALGG---DLSTSGSS--TAWSGTRAIQSPQLMEHQALPS----------WDSTGRNDSTNVQEAARTNTRAGSSIGQVSECRELSQSAWLHYPHLELVFLFFAFEGAVTSQVSALRSTSSSTVFYAAVATLTGCNLSRIATMSILGFILFDVRGRVRVRSDALIVFTSNKTDEGSTGKSTLYSKMVTGLKKDSSLFAWADKGHWNTVQTADEDARRDADWFRIGFEPLYADFTQAGSWFTVYTLIEWATLACIAVLVDNSAVQCGLFCALHSMTFILLVVCKPFANSVLNTMGAIVMLTDAVCMGMLALSAGTFRMTAAADRIDIVVMVAQHLCIAVLVVPLYVD---TLLLVWG----AIRNRRGPV----KTRDNAAQRAEREFINRRTLRLWGRTWFNMVGSNVFACVRDTREGIRDPTGSR 636
BLAST of mRNA_H-elongata_contig733.15013.1 vs. uniprot
Match: D8LN89_ECTSI (Liver stage antigen 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN89_ECTSI) HSP 1 Score: 274 bits (701), Expect = 2.800e-70 Identity = 197/586 (33.62%), Postives = 310/586 (52.90%), Query Frame = 2
Query: 2354 SMSIRKPSATLAFILISQLQFIATFSIVDWDTPGETSWLREFGSRLRWLNLWWPSTFA---------------GDDAIGDGMSRRILALSFTYSWEG----------PGLFFSVGNIILVIGCFLCIFLLHLVVLSGLEAHWLLKKRAKAVWKAAKRRGIPESELRAQIYGKRIRKRLLPGAKNDP--EDKGSSLKSVTAGTLTSLSKPLVIYNMLQDDSVFDEEASEWKEHGDQEEGYVERYCVGQDTIDSIEKYRDKSTSAWVHFPHVELVFLFFAFEGFVAAQVAGFRQHGCLPISIISAVVLVLYPMLMFLSVCRTTLVRVCSNLVIEFRRFPQDDTHG---------GLTSRTNTGWRYDRSLFKWADKGRWYTVETSDEALRRKWNWFRIGFEPMFVGFTQSRAWFSVILLLQWTLLACVAVLINTSVIQLFLFCAIHLGAFIILVTLRPFANKVVDFIASLVAFTNALSMVLMASTDLAWIGTKWALEIEGTVVILHLFVLTVLVVPIYIDLVAGVMVAWSRKATSATNKTRPLVKQEETADDSAQAFARSFILHMWAKTWYSVVGQNILAYMKDIREG 4003
S SIR+PS T+A + + QLQF+AT S+V +T E S L +F + LRW+NLW P++FA G+DA EG G+F VGN++L + IFL+H+ V SG+EA+WL K+ A+ A+RRG+P EL A++ P A DP E + S + T+G D+E + D EEG E VG+ + I + R++S S W+HFPHVEL++L FAFEG VAAQV+ R++ L + I++ + L+ +P+LM +V T ++ S I F D S+ G + S+F W++KG W +V+T DE +R +WFRIGFEP+FV FT + +WF+V L++ A V V+++ SV+QL LF A + +F++LV L+PFAN +++F+ + V +A M ++A T W GT+ A +++ VVI+ L L +++P+Y+D A +MV S +K R V++++ D + + R +I WA + +++ +N+LA++K+ G
Sbjct: 2178 SSSIRRPSTTMAIVALGQLQFLATLSLVG-NTGTEDSKLYDFANNLRWINLWPPASFARSFTPASMYGELDQEGEDAXXXXXXXXXXXXXXXXX-EGVENEESGDLSSGVF--VGNLVLFLIILFIIFLIHITVASGIEAYWLAKRGAEKHVARAQRRGVPVRELSARLSN--------PWAPFDPNSESQRSLRTAKTSG---------------------DDEGE--ADDTDAEEGMPE--TVGRSKLSKIAECRERSQSVWLHFPHVELMYLLFAFEGAVAAQVSAIRENATLLVLILAVLALLFFPVLMTFNVMCTFFGKIRSKKHIVFIPNADDAVEAESDLYTSVRSFGSKVRRGLKESYSMFAWSNKGEWESVDTPDEEDKRARDWFRIGFEPLFVDFTGAGSWFAVYALIELVANAVVGVVVDNSVLQLSLFGAFNTVSFLLLVVLKPFANGIINFMGAAVYGIDAACMAVLAVTADKWGGTERASQVDSVVVIVQLLTLAAIIIPLYVD-TAFMMVG------SIRDKLRG-VREDDHIDADERKYIRRYIWGAWAPIFCTMIRKNVLAFLKETSAG 2718
BLAST of mRNA_H-elongata_contig733.15013.1 vs. uniprot
Match: A0A6H5KV63_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV63_9PHAE) HSP 1 Score: 244 bits (624), Expect = 6.910e-66 Identity = 152/402 (37.81%), Postives = 216/402 (53.73%), Query Frame = 2
Query: 2924 DDSVFDEEASEWKEHGDQEEGYVERYCVGQDTIDSIEKYRDKSTSAWVHFPHVELVFLFFAFEGFVAAQVAGFRQHGCLPISIISAVVLVLYPMLMFLSVCRTTLVRVCSNLVIEFRRFPQDDTHGGLTSRTNTGWRYDRSLFKWADKGRWYTVETSDEALRRKWNWFRIGFEPMFVGFTQSRAWFSVILLL------------------QWTLLACVAVLINTSVIQLFLFCAIHLGAFIILVTLRPFANK--------------------VVDFIASLVAFTNALSMVLMASTDLAWIGTKWALEIEGTVVILHLFVLTVLVVPIYIDLVAGVMVAWSRKATSATNKTRPLVKQEETADDSAQAFARSFILHMWAKTWYSVVGQNILAYMKDIREGLRKP 4015
DD + D + S++ E G G + R + + S+ + R+ S AW+HFPHVELVFLFFA+EG VA+QV+ R+ GCLP+ I + + LV YP+LMF++V RT VRV N I F S+ GW D SLF WA+KG W T ET +E +RR+ WFRIGFEP+FV FT+S AWF L+ QW L C+ LI+ SV+QL LFCA+H +F++LV RPFAN+ V++ + + + +A+ M L+A + W GT A +++ V++L LF L++PIYID ++ A + T V+ E A+ F R FI W +TW +++G+NI A D EG+R P
Sbjct: 132 DDILSDTDCSDYDEEGGGGLGTLTR---AESRLSSVAECREHSQFAWLHFPHVELVFLFFAYEGAVASQVSALREAGCLPVMIAAGLALVFYPILMFVAVLRTFFVRVRPNTPIVF------------LSKVRAGWEEDHSLFAWANKGTWETAETDNEGIRREGQWFRIGFEPLFVDFTKSGAWFVAFTLVEGCLGLGHAVSFLLIYFAQWAALGCIGALIDESVLQLSLFCALHTLSFLLLVVFRPFANRLERKTQRVRFLDRLYFRAHSVINAMGAGLVGIDAVCMALLAVSASRWEGTVAAGKVDSAVMLLQLFARCALIIPIYIDTSLMLIEAIRSRLQKCTTTAPQHVRTE--AEKVEDLFVRHFIRRSWPRTWCTILGKNIFACASDTSEGIRPP 516 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig733.15013.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig733.15013.1 >prot_H-elongata_contig733.15013.1 ID=prot_H-elongata_contig733.15013.1|Name=mRNA_H-elongata_contig733.15013.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=809bp MFSFVSSPARRLSTSLIKFAAETGSLSTATTSSSAIRVITPFTTAPFKEYback to top mRNA from alignment at H-elongata_contig733:10212..19416+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig733.15013.1 ID=mRNA_H-elongata_contig733.15013.1|Name=mRNA_H-elongata_contig733.15013.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=9205bp|location=Sequence derived from alignment at H-elongata_contig733:10212..19416+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig733:10212..19416+ >mRNA_H-elongata_contig733.15013.1 ID=mRNA_H-elongata_contig733.15013.1|Name=mRNA_H-elongata_contig733.15013.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=4854bp|location=Sequence derived from alignment at H-elongata_contig733:10212..19416+ (Himanthalia elongata Himel1 dioecious)back to top |