mRNA_H-elongata_contig7307.14985.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig7307.14985.1 vs. uniprot
Match: Q6XLV6_9PHYC (FirrV-1-F1 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XLV6_9PHYC) HSP 1 Score: 388 bits (996), Expect = 8.700e-116 Identity = 232/645 (35.97%), Postives = 351/645 (54.42%), Query Frame = 1
Query: 409 LNKALKTEVQRTEFG--VTVMSQTEDRIFGFLVEGGVPVSLRVLG---GRSPAYLVEVYLAHTKDCSSRSDVIELIDLASDGVWEWFPSLNYEFMSKRFWGILGYNYREMPSSPEAWGSIIDPEDLEKATTCFKAHVATKGVTPYNMDVSYTHRKGHAVKVKCRGAVVEWLPDGTPWRMLGTHTDITEIT--EAVEAKVRFVSRISHEIRTPISAILHECELLDKYADTAVTEDACAQLLSLCNDILTVEKLSRPKALKLVTQSTSLKEFLHKAIRRNHGQAQKKRLVLSGKAHTPVTLRLMMDVGKCNQVVDNLISNAIKYTETGGSVMVELYCRTRGNIFDPSAPNDTHAGCGEQDDDAGDASLEEPFRSEEEWEVEIVVRDTGVGIYIEDQEVVFDRFMQANSSMQGAGLGLSISRELACFMAGDVFLRYSHPGKGSTFVFSFRASLAPKKSATQPSLTAATLAVGTSEAVGTARRVGSGAGRTGNYEGQPEAVGKAGTKREYRCGKSNSDIPVNGDKGSTGVPIIRILSADDMLTNRKIIRRRLLTIQEQLGPRSIEVVDAVDGRDAVRVF-RDLGSFDVVFMDCLMPEMNGFDATRAIHRLCEERNIARVPVVAITASVSAALYRECMEAGMCQVVTKPF 2319
+N K V+ T+ G + V+S + I+G G+P+ L + G + + +VEV+LAH+K ++D L DLA+DG WEW+P+LNYE+MS RFW ILGY +M SP+AW I PE E A F H + PY ++ Y H+ GH V + CRG + EWLPDG+PWRM+GTHTDIT+I +A+ A+ +F+SR+SHEIR+P+ A+L+EC++L D V +DAC+Q+L + ND+L+++KL + K ++ Q ++ ++ ++R+ G+ +KK L L + L +M+DVGK NQ++DNL+SNA+KYT G +Y T + DDD+ V DTG+G+ ++++ +FD F Q +SM+G G+GL I L + G V + + PG+G+T F + + VG A R K S +RIL DD+ TNR + R+L ++++ + EVV+A+DG+DAVR+F + FD+V MDCLMP M+GF+AT+ IH +C+ RN+AR+PV+A+TAS++ + +C EAGM VVTKPF
Sbjct: 30 INDKYKEVVKDTDDGEYIDVLSSKDGVIYG--TRKGIPIRLVTICQHLGAADSTIVEVFLAHSKTTPIKTDFTVLADLATDGFWEWYPALNYEYMSVRFWSILGYAQADMDESPDAWKEKIHPESREFALENFVKHAESNATIPYYVNAKYRHKDGHVVHLVCRGTINEWLPDGSPWRMIGTHTDITDIVMKDALVAREQFISRMSHEIRSPLCAVLNECDILGDKHDLTVIKDACSQVLYIANDVLSLDKL-KSKDVRPDPQECCPEDVINNTVKRHRGEYKKKGLRLLTSVNNVPEL-VMLDVGKFNQILDNLLSNALKYTAKG-----RVYIDT------------------DFDDDSSMLIT--------------TVEDTGIGMTEDEKQYIFDEFYQGTTSMKGIGIGLYIVSVLCKLLGGFVEVTDTEPGRGTTLKFGVKV----------------------------------------------QVVGTAPDNEPLR-------------KKS-----LRILVVDDIATNRVYMNRKLQSLEQTMDLSITEVVEAIDGKDAVRIFDKSQDVFDLVLMDCLMPIMDGFEATKRIHLICDSRNVARIPVIAVTASIADDIDEKCREAGMVYVVTKPF 569
BLAST of mRNA_H-elongata_contig7307.14985.1 vs. uniprot
Match: D8LP35_ECTSI (Histidine kinase-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP35_ECTSI) HSP 1 Score: 386 bits (992), Expect = 3.860e-115 Identity = 245/666 (36.79%), Postives = 356/666 (53.45%), Query Frame = 1
Query: 358 SSICIGVFDDRKGRVHSLNKALKTEVQRTEFGVTVMSQTEDRIFGFLVEGGVPVSLRVLGGRSP-AYLVEVYLAHTKDCSSRSDVIELIDLASDGVWEWFPSLNYEFMSKRFWGILGYNYREMPSSPEAWGSIIDPEDLEKATTCFKAHVATKGVTPYNMDVSYTHRKGHAVKVKCRGAVVEWLPDGTPWRMLGTHTDITEIT--EAVEAKVRFVSRISHEIRTPISAILHECELLDKYADTAVTEDACAQLLSLCNDILTVEKLSRPKALKLVTQSTSLKEFLHKAIRRNHGQAQKK--RLVLSGKAHTPVTLRLMMDVGKCNQVVDNLISNAIKYTETGGSVMVELYCRTRGNIFDPSAPNDTHAGCGEQDDDAGDASLEEPFRSEEEWEVEIVVRDTGVGIYIEDQEVVFDRFMQANSSMQGAGLGLSISRELACFMAGDVFLRYSHPGKGSTFVFSFRASLAPKKSATQPSLTAATLAVGTSEAVGTARRVGSGAGRTGNYEGQPEAVGKAGTKREYRCGKSNSDIPVNGDKGSTGVPIIRILSADDMLTNRKIIRRRLLTIQEQLGPRSIEVVDAVDGRDAVRVF-RDLGSFDVVFMDCLMPEMNGFDATRAIHRLCEERNIARVPVVAITASVSAALYRECMEAGMCQVVTKPFKTLDLL 2337
SS + ++D K LN ALKT + G + T ++ +L G+P L+ + +P ++VE++ AHTK SD+++L DL SDGVWEWFP LN+E+MS+R+W ILGY+ +EM AW +I P+DL++ HV +KG PY+ V YTH+ G+ V V CRG +V+WLPDGTPWRMLGTHTD+T+I +AVEA+ F++R+SHEIR+PI +IL+ECELL A T+V C QL++L +DIL++ S+ AL+L + L+ L + +R+ +A+KK R+ LS + L MD + NQ++DNL++NAIKY+++G + D D H EI V+D G GI VF+ F+Q + +MQGAG+GL++++ ++ M GDV + S G G+T +F+ S+ P P+ A + ++ RC ++ IL DDM TNR I+ RRL + E+LG R ++ +AVDGRDA F G F ++ MDCLMP ++GF+AT IH C I VPVVA+TASVS+ + +C+ GM VVTKP+ DLL
Sbjct: 16 SSQFMAIYDSDKEMFVELNGALKTRMGSAPMGTIKVLVTSEKAI-YLTLSGIPCRLQKIVNLTPHVHIVEIFPAHTKTWEQSSDLVQLTDLTSDGVWEWFPPLNFEYMSQRYWDILGYDQKEMHEKQNAWMDLIHPDDLQRVLKMSDDHVESKGNVPYHATVRYTHKNGNEVFVLCRGTIVDWLPDGTPWRMLGTHTDVTDIVKKDAVEAQSVFIARMSHEIRSPICSILNECELLQNEAQTSVISRTCQQLIALTDDILSLGD-SKSNALQLEQKEVILQSVLSQCNKRHRLEAKKKGIRVKLSMGDLPDIVL---MDETRFNQILDNLMNNAIKYSDSGAITI------------DVDYDYDDHV-------------------------CEIRVQDHGHGIPAAMHAKVFEEFVQGDKTMQGAGIGLTLTKTMSSLMGGDVVIEDSKEGVGTTMLFT---SILPL----------------------------------------PDDG--ACSDKKKRC-------------------VVNILIVDDMRTNRSILTRRLACM-EKLGIRHTQITEAVDGRDACEKFVAGNGDFQLILMDCLMPVLDGFEATSTIHNHCARMGIEPVPVVAVTASVSSDIREKCLNHGMKFVVTKPYTEQDLL 574
BLAST of mRNA_H-elongata_contig7307.14985.1 vs. uniprot
Match: D8LPJ7_ECTSI (Histidine kinase-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPJ7_ECTSI) HSP 1 Score: 373 bits (957), Expect = 1.440e-111 Identity = 216/576 (37.50%), Postives = 317/576 (55.03%), Query Frame = 1
Query: 601 SDVIELIDLASDGVWEWFPSLNYEFMSKRFWGILGYNYREMPSSPEAWGSIIDPEDLEKATTCFKAHVATKGVTPYNMDVSYTHRKGHAVKVKCRGAVVEWLPDGTPWRMLGTHTDITEIT--EAVEAKVRFVSRISHEIRTPISAILHECELLDKYADTAVTEDACAQLLSLCNDILTVEKLSRPKALKLVTQSTSLKEFLHKAIRRNHGQAQKKRLVLSGKAHTPVTLRLMMDVGKCNQVVDNLISNAIKYTETGGSVMVELYCRTRGNIFDPSAPNDTHAGCGEQDDDAGDASLEEPFRSEEEWEVEIVVRDTGVGIYIEDQEVVFDRFMQANSSMQGAGLGLSISRELACFMAGDVFLRYSHPGKGSTFVFSFRASLAPKKSATQPSLTAATLAVGTSEAVGTARRVGSGAGRTGNYEGQPEAVGKAGTKREYRCGKSNSDIPVNGDKGSTGVPIIRILSADDMLTNRKIIRRRLLTIQEQLGPRSIEVVDAVDGRDAVRVFRDLGS-FDVVFMDCLMPEMNGFDATRAIHRLCEERNIARVPVVAITASVSAALYRECMEAGMCQVVTKPF 2319
+D L DLA+DG WEW+P+LNYE+MS+RFW ILGY+ EM SP+AW ID +D +A F H ++G PY + V Y H+ GH V + CRG+V EWLPDGTPWR++GTHTD+T+I +++ A+ +FVSR+SHEIR+P+ A+L+EC+LL D +V +D+C Q+L + NDIL+++KL + A+ L + +E + +I+R+ + +KK L LS L + +D K NQ++DN++SNA+KYT G SV ++ CG D + L + V DTGVGI ++Q +FD F Q + SM+G G+GL I L+ F+ G + + S G+G+T F A + + + ++ S +R+L DD+ TNRK + R+L +++ +G + EVV+A DG+DAVRVF FDVV MDCLMP M+GF AT+ IH +C+++ I RVPVVA+TAS++ +Y+ C +AGM VVTKPF
Sbjct: 5 TDFTILADLATDGFWEWYPALNYEYMSERFWSILGYSQGEMDESPDAWVEKIDSDDARRAMANFTEHSGSRGAVPYYLTVKYRHKDGHVVHIVCRGSVEEWLPDGTPWRIIGTHTDVTDIVMKDSLRAREQFVSRMSHEIRSPLCAVLNECDLLGNKYDLSVIKDSCTQILYIANDILSLDKL-KSNAMVLDAEPCDPEEVIASSIKRHRREFKKKGLRLSSSMDDMPPL-ISLDRAKFNQILDNILSNALKYTNKG-SVSID---------------------CGF---DCNSSMLS------------VTVEDTGVGIPADEQGKIFDEFFQGSKSMRGIGIGLHIVTVLSKFLGGKIEVVRSEVGEGTTMRFGVVAEV----------------------------------------------------------------LSPSDEEQSATTKTLRVLVVDDIATNRKYLDRKLQGMEDAVGLKVTEVVEACDGKDAVRVFEKSDDRFDVVLMDCLMPIMDGFQATKEIHSVCDKKEIPRVPVVAVTASIADNIYQLCQDAGMTCVVTKPF 477
BLAST of mRNA_H-elongata_contig7307.14985.1 vs. uniprot
Match: A0A6H5K314_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K314_9PHAE) HSP 1 Score: 377 bits (967), Expect = 7.000e-110 Identity = 261/758 (34.43%), Postives = 391/758 (51.58%), Query Frame = 1
Query: 358 SSICIGVFDDRKGRVHSLNKALKTEVQRTEFG-VTVMSQTEDRIFGFLVEGGVPVSLRV-LGGRSPAYLVEVYLAHTKDCSSRSDVIELIDLASDGVWEWFPSLNYEFMSKRFWGILGYNYREMPSSPEAWGSIIDPEDLEKATTCFKAHVATKGVTPYNMDVSYTHRKGHAVKVKCRGAVVEWLPDGTPWRMLGTHTDITEIT--EAVEAKVRFVSRISHEIRTPISAILHECELLDKYADTAVTEDACAQLLSLCNDILTVEKLSRPKALKLVTQSTSLKEFLHKAIRRNHGQAQKKRLVLSGKAHTPVTL-RLMMDVGKCNQVVDNLISNAIKYTETGGSVMVELYCRTRGNIFDPSAPNDTHAGCGEQDDDAGDASLEEPFRSEEEWEVEIVVRDTGVGIYIEDQEVVFDRFMQANSSMQGAGLGLSISRELACFMAGDVFLRYSHPGKGSTFVFS--FRASLAPKKS------------ATQPSLTAATL---------------AVGTSEAVGTARRVGSGAGRTGNY--EGQPEAVGKAGT---KREYRCGKSNSDIPVN-----------GDKGSTGVPI-----------------------------------------------IRILSADDMLTNRKIIRRRLLTIQEQLGPRSIEVVDAVDGRDAVRVF-RDLGSFDVVFMDCLMPEMNGFDATRAIHRLCEERNIARVPVVAITASVSAALYRECMEAGMCQVVTKPFKTLDLL 2337
SS + ++D R+ R +N+ ++ + T ++V++ +E + + G+P RV L ++E++ AHTK + SD+I+L DLASDGVWEWFPS+N+E+MSKRFW ILGY+ +M +P AW ++P+D E F+AH+ + G +PY+ V YTH++GH V + CRG++V+WLPDGTPWRMLGTHTD+T I +AVEAK F++R+SHEIR+PI IL+ECELL A T V D C QL+++ ++IL++ LS+ L+LV Q T + L + RR+ +A KK + + + T V L++D GK NQ++DNL++NAIKY++ G + A DT ++E+ V D G GI VF+ F+Q + +M GAG+GL+++R+ + M GDV + S G+T +F+ + +P +S AT ++ L AV EAV + + + Y EG + T K E R + IP N GDK +G I IL DDM TNR I++RRL ++ LG +++AVDG++AV +F + G F ++ MDCLMP ++GFDAT AIH+ C+ + VPVVA+TASVS ++ +C ++GM VVTKP+ +LL
Sbjct: 14 SSQFMCIYDRRENRFVEMNQRMRDRMHGTPTDDISVIADSEAETY--ITVSGIPCKCRVVLALDEDLCVMEMFPAHTKKWTQSSDLIQLTDLASDGVWEWFPSVNFEYMSKRFWSILGYDQHDMDETPLAWMDCLNPDDKEAVLAMFEAHMKSGGASPYHSRVRYTHKEGHEVVILCRGSIVDWLPDGTPWRMLGTHTDVTSIVKKDAVEAKSVFIARMSHEIRSPICTILNECELLGMNARTRVILDTCNQLITITDNILSLG-LSKEPTLRLVLQETDVYALLQRCSRRHRLEAGKKNIRI--RVSTEVMPDSLLVDTGKYNQILDNLVTNAIKYSDEG--------------TINIDAEYDTDTS-----------------------KLELRVSDNGKGIPANMTTAVFEEFVQGDKTMSGAGIGLALARKYSKIMGGDVCIERSEVDHGTTMLFTSILKEPESPSQSTKCFDILLVDDMATNRAILQRRLHSLSTLGMNPSAILEAVDGQEAVDINQILDNLVTNAIKYSDEGTINIDAEYDTDTSKLELRVSDNGKGIPANMTTAVFEEFVQGDKTMSGAGIGLALARKYSKIMGGDVCIERSEVDHGTTILFTSILREPESPPQSSKCFDILLVDDMATNRAILQRRLHSLST-LGMNPSAILEAVDGQEAVDMFVQRKGDFQLILMDCLMPILDGFDATVAIHKECKRLGLEPVPVVAVTASVSPDVHEKCFKSGMANVVTKPYSEDELL 728
BLAST of mRNA_H-elongata_contig7307.14985.1 vs. uniprot
Match: B5LWN0_9PHYC (Putative hybrid sensor histdine kinase n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWN0_9PHYC) HSP 1 Score: 365 bits (936), Expect = 2.350e-107 Identity = 230/662 (34.74%), Postives = 347/662 (52.42%), Query Frame = 1
Query: 388 RKGRVHSLN-KALK------TEVQRTEFGVTVMSQTEDRIFGFLVEGGVPVSLRVLGGRSPAYLVEVYLAHTKDCSSRSDVIELIDLASDGVWEWFPSLNYEFMSKRFWGILGYNYREMPSSPEAWGSIIDPEDLEKATTCFKAHVATKGVTPYNMDVSYTHRKGHAVKVKCRGAVVEWLPDGTPWRMLGTHTDITEIT--EAVEAKVRFVSRISHEIRTPISAILHECELLDKYADTAVTEDACAQLLSLCNDILTVEKLSRPKALKLVTQSTSLKEFLHKAIRRNHGQAQKKRLVLSGKAHTPVTLRLMMDVGKCNQVVDNLISNAIKYTETGGSVMVELYCRTRGNIFDPSAPNDTHAGCGEQDDDAGDASLEEPFRSEEEWEVEIVVRDTGVGIYIEDQEVVFDRFMQANSSMQGAGLGLSISRELACFMAGDVFLRYSHPGKGSTFVFSFRASLAPKKSATQPSLTAATLAVGTSEAVGTARRVGSGAGRTGNYEGQPEAVGKAGTKREYRCGKSNSDIPVNGDKGSTGVPIIRILSADDMLTNRKIIRRRLLTIQEQLGPRSIEVVDAVDGRDAVRVFRDLGS-FDVVFMDCLMPEMNGFDATRAIHRLCEERNIARVPVVAITASVSAALYRECMEAGMCQVVTKPFKTLDLLTV 2343
R+G++H LN A++ +++Q T V ++G G+PV L+ L + ++V+++LA TK +D +L DLA+DG WEW+P ++YE+MS RFW ILGY+ ++M SP +W + I+ ED A ++ H+ ++G PY + Y HR GH V+V CRG+V+EWLPDG PW++ GTHTD+T I +A+ + +FVSR+SHEIR+P+ A+L+EC+ L + DACAQ++ + NDIL ++K++ + +E ++ +R+ + +KK L LS + +++DV K NQ+VDNLISN+IKYT+ G + + C D D + R + DTGVGI +D+ +FD F Q ++SM+G G+GL I L + G V + S GKG+T F +P A E++ +D P+ G +R+L DDM TN I R+L I+E+L + EVV+A+DG +V F+ FD+V MDCLMP M+GF+AT+ IH+LC++RN RVPV+A+TASVS + +C AGM VVTKPF T D +
Sbjct: 27 REGKLHPLNINAVRVLGEDSSDIQPTVVHVIGEDSLSKILYGTTGLCGIPVKLQKLWPSTDGFIVQIFLASTKASIHPTDFTKLGDLATDGFWEWYPVVDYEYMSNRFWSILGYSQKDMDESPSSWQAKIEKEDHLIALKTYEDHIQSRGKKPYYVRARYRHRNGHQVQVVCRGSVIEWLPDGRPWKLFGTHTDVTTIVMRDALAQREKFVSRMSHEIRSPLCAVLNECDSLGDNHNLDGIRDACAQMIYIANDILELQKMNSDEMKVAKNVRCCPEEVINLVAKRHRREIRKKGLRLSVSVGD-LPDDILVDVPKFNQIVDNLISNSIKYTDKG---RISIDC------------------------DFDDTNSTLVTR----------IEDTGVGIPDKDRASIFDEFYQGSTSMRGIGIGLHIVTSLCRLLGGMVEVESSVEGKGTTMCFRLPVE-------------------------------------------KPCA-------HEFK-----NDSPIRG---------LRVLIVDDMKTNISYIHRKLAMIEEELNFKINEVVEALDGSISVSKFKQSKKPFDLVLMDCLMPIMDGFEATKKIHQLCDDRNQPRVPVIAVTASVSNTIGEDCGAAGMSAVVTKPFTTADFCKI 586
BLAST of mRNA_H-elongata_contig7307.14985.1 vs. uniprot
Match: UPI000695FB80 (transporter substrate-binding domain-containing protein n=1 Tax=Desulfonatronovibrio magnus TaxID=698827 RepID=UPI000695FB80) HSP 1 Score: 196 bits (499), Expect = 9.150e-47 Identity = 185/642 (28.82%), Postives = 273/642 (42.52%), Query Frame = 1
Query: 613 ELIDLASDGVWEWFPSLNYEFMSKRFWGILGYNYREMPSSPEAWGSIIDPEDLEKATTCFKAHVATKGVTPYNMDVSYTHRKGHAVKVKCRGAVVEWLPDGTPWRMLGTHTDITE----------------------------ITEAVEAKVRFVSRISHEIRTPISAILHECELLDKYADTAVT----------EDACAQLLSLCNDILTVEKLSRPKALKLVTQSTSLKEFLHKAIRRNHGQAQKKRLVLSGKAHTPVTLRLMMDVGKCNQVVDNLISNAIKYTETGGSVMVELYCRTRGNIFDPSAPNDTHAGCGEQDDDAGDASLEEP---FRSEEEWEVE----------IVVRDTGVGIYIEDQEVVFDRFMQANSS----MQGAGLGLSISRELACFMAGDVFLRYSHPGKGSTFVFSFRASLAPKKSATQPSLTAATLAVGTSEAVGTARRVGSGAGRTGNYEGQPEAVGKAGTKREYRCGKSNSDIPVNGDKGSTGVPIIRILSADDMLTNRKIIRRRLLTIQEQLGPRSIEVVDAVDGRDAVRVFRDLGSFDVVFMDCLMPEMNGFDATRAIHRL-----CEERNIARVPVVAITASVSAALYRECMEAGMCQVVTKPFKTLDLLTVFAAMV 2358
++++ G W+W N E++S F + GY EM SSPEAW II PEDL F HV ++G PY +V Y HR V V C G V+EW DG P RM+G H DITE A AK F++ +SHEIRTP++ ++ +LL DT ++ + + LL + NDIL + K+ K L + Q L EFL + A+KK L H V L D Q+++NLI NA+K+TE G VE++ + D HAG D+AG EE R + V VRDTG+GI E+ +++FD+F Q + S +G GLGL++++ L G +++ S G+G+ F F+ + R + + K ++P T + RIL A+D N++I+ L + S++VV + G++AV FD+V MD MP M+G +ATR I +E R+P++A+TA A + + AGM +TKP +LL V AA +
Sbjct: 839 DILESTLSGYWDWNLVNNTEYLSPTFKRMFGYEDHEMESSPEAWQKIIFPEDLPGVLEAFNRHVKSRGREPYYSEVRYRHRDDSTVWVICAGRVIEWTEDGEPVRMVGCHLDITERKLAEEKLQQSAEQLKMKNMELDSALAQAEAATRAKSDFLANMSHEIRTPMNGVIGMVDLL---LDTDLSPRQLRFAQAIKQSGQALLGIVNDILDISKVEAGK-LDIQAQDFDLTEFLEQCCSGASVLARKKGLRFDSYIHPDVPSHLRGDPKLLRQILNNLIGNAVKFTEQGE---VEIWVEEERD--DAGMLEYWHAGI----DEAGRGKGEEKRLTVRPSDGLPVPPSHCPTVLLLFTVRDTGIGISPENFDMLFDKFTQVDFSTTRRFEGTGLGLALTKLLVEKQGGRIWVE-SELGRGTCFTFTLPVT------------------------------------RAQGLLDSADFIKK-------------DEVP-----DLTRIKGARILLAEDNEINQEIVVENL-----RKWGMSVQVVGS--GQEAVSALTSQ-DFDLVLMDIQMPGMDGLEATRRIRSQKSGVRSQETGRQRIPIIAMTAHAMAGDRDKSLGAGMNDHITKPIDPEELLRVLAAWI 1404
BLAST of mRNA_H-elongata_contig7307.14985.1 vs. uniprot
Match: A0A1Y6BGI3_9PROT (Histidine kinase n=1 Tax=Pseudobacteriovorax antillogorgiicola TaxID=1513793 RepID=A0A1Y6BGI3_9PROT) HSP 1 Score: 189 bits (481), Expect = 1.490e-46 Identity = 130/400 (32.50%), Postives = 191/400 (47.75%), Query Frame = 1
Query: 616 LIDLASDGVWEWFPSLNYEFMSKRFWGILGYNYREMPSSPEAWGSIIDPEDLEKATTCFKAHVATKGVTPYNMDVSYTHRKGHAVKVKCRGAVVEWLPDGTPWRMLGTHTDITEITEA--------------VEAKVRFVSRISHEIRTPISAILHECELLD---------KYADTAVTEDACAQLLSLCNDILTVEKLSRPKALKLVTQSTSLKEFLHKAIRRNHGQAQKKRLVLSGKAHTPVTLRLMM-----DVGKCNQVVDNLISNAIKYTETGGSVMVELYCRTRGNIFDPSAPNDTHAGCGEQDDDAGDASLEEPFRSEEEWEVEIVVRDTGVGIYIEDQEVVFDRFMQANSSMQ----GAGLGLSISRELACFMAGDVFLRYSHPGKGSTFVF 1719
LI+ DG W+W NYE+MS RFW ILG+ E P+ W +I PEDL++A F HVA+ G PY+++V Y + G + V CRG VVEW G P RM+GTHTDIT+ + AK F+ +SHEIRTP++ ++ E+L KY D + E+ L + D+L + L K +L ++K + + I + +KK + H L LM D QVV LISNA+K+T G +E+YC ++ PS +E ++ I VRD+G+G+ + +++F+ + QA+ S GAGLGL+I R++A + G + R S G GS F F
Sbjct: 139 LIEATYDGYWDWKIQENYEYMSPRFWEILGFQAHEKKHDPKEWQELIFPEDLKRALKSFDRHVASHGADPYSLEVRYRAKDGSTIWVLCRGKVVEWDDAGQPLRMIGTHTDITKAKQTEHILRLAKESAEQEARAKASFMETMSHEIRTPLNGVMGASEILAEIIEDPEALKYLD--IIENCSQTLKDIVEDVLNLSSLRDSKN-QLRVADVNIKNIIRQEIEKYRESCRKKGI------HIEENLPLMRPSIPTDPTLVKQVVRQLISNAVKFTHRG---TIEVYC----DVMHPS---------------------------DERPQIVIEVRDSGIGVPQDKADLIFESYRQADESSTRNHGGAGLGLAICRQIALNLEGSISYRPSQSG-GSIFSF 494
BLAST of mRNA_H-elongata_contig7307.14985.1 vs. uniprot
Match: A0A7C2BSB7_9BACT (Histidine kinase n=2 Tax=root TaxID=1 RepID=A0A7C2BSB7_9BACT) HSP 1 Score: 176 bits (445), Expect = 3.250e-41 Identity = 161/610 (26.39%), Postives = 267/610 (43.77%), Query Frame = 1
Query: 595 SRSDVIELIDLASDGVWEWFPSLNYEFMSKRFWGILGYNYREMPSSPEAWGSIIDPEDLEKATTCFKAHVATKGVTPYNMDVSYTHRKGHAVKVKCRGAVVEWLPDGTPWRMLGTHTDITEIT--------------EAVEAKVRFVSRISHEIRTPISAILHECELL--DKYADTAV-----TEDACAQLLSLCNDILTVEKLSRPKALKLVTQSTSLKEFLHKAIRRNHGQAQKKRLVLSGKAHTPVTLRLMMDVGKCNQVVDNLISNAIKYTETGGSVMVELYCRTRGNIFDPSAPNDTHAGCGEQDDDAGDASLEEPFRSEEEWEVEIVVRDTGVGIYIEDQEVVFDRFMQANSSMQ----GAGLGLSISRELACFMAGDVFLRYSHPGKGSTFVFSFRASLAPKKSATQPSLTAATLAVGTSEAVGTARRVGSGAGRTGNYEGQPEAVGKAGTKREYRCGKSNSDIPVNGDKGSTGVPIIRILSADDMLTNRKIIRRRLLTIQEQLGPRSIEVVDAVDGRDAVRVFRDLGSFDVVFMDCLMPEMNGFDATRAIHRLCEERNIARVPVVAITASVSAALYRECMEAGMCQVVTKPFKTLDLLTVFA 2349
S+ ++ ++ G+W+W + S ++ +LGY E +S E+W +++ PEDL H+ K V P+ + + G + RG + DG+P R++GTHTDITE+ EA +AK +F++ +SHEIRTP++AI+ ++L ++ D + D+ LL L NDIL K+ K L++ T SL L QA+KK L + R+ D + Q + NL SNAIK+TE +G+++ + SLE+ +++ + + DTG+GI + QE +F F QA+ S G GLGL+++++LA + G++ L S G+GS F + A++ K + R + + G A + E+ C +L A+D TN +++ L E++G +++ DG A++ FD++ MD +MP MNG++A RAI + P+VA+TA+ +C+EAG +TKP DLL +FA
Sbjct: 289 SQERLMSALNATDTGLWDWDVKTGEAYFSPSYYTMLGYEPDEFEASYESWRNLLHPEDLGPIEKKLVGHL--KRVEPFEYEHRLKTKSGDYKWILSRGKSITKDTDGSPVRIVGTHTDITELKQYQEELTHAKTAAEEANQAKSQFLANMSHEIRTPMNAIIGFSDILSGEELTDEHIRYVNLVRDSAHNLLDLINDILDFSKIEA-KQLEVETVECSLGRILGFIDSTMCQQAEKKSLEFKVVTCDGLPERICTDPARLRQCLINLTSNAIKFTE-------------KGHVY-------------------VNVSLED---RDDQTYIRFGIEDTGIGIPEDKQEEIFTPFTQADGSHTRKYGGTGLGLTVTKQLAGLLGGELTLA-SEVGRGSVFSLTIPANIDVTKQS-----------------------------RLDIHATHVKPQGNATEQTEFVC---------------------NVLVAEDSPTNMVLVKLLL----EKMG---LQITGVEDGNQALQKALTQ-EFDLILMDMMMPNMNGYEAARAI-----KNEGITTPIVALTANAMKGDREKCIEAGCDDYLTKPIDRGDLLRIFA 796
BLAST of mRNA_H-elongata_contig7307.14985.1 vs. uniprot
Match: A0A2E3LUQ8_9BACT (Uncharacterized protein n=1 Tax=Waddliaceae bacterium TaxID=2026802 RepID=A0A2E3LUQ8_9BACT) HSP 1 Score: 170 bits (431), Expect = 8.150e-41 Identity = 116/389 (29.82%), Postives = 183/389 (47.04%), Query Frame = 1
Query: 610 IELIDLASDGVWEWFPSLNYEFMSKRFWGILGYNYREMPSSPEAWGSIIDPEDLEKATTCFKAHVATKGVTPYNMDVSYTHRKGHAVKVKCRGAVVEWLPDGTPWRMLGTHTDITEITEAVEA-------KVRFVSRISHEIRTPISAILHECELLDKYADTAVTEDACAQLLS----------LCNDILTVEKLSRPKALKLVTQSTSLKEFLHKAIRRNHGQAQKKRLVLSGKAHTPVTLRLMMDVGKCNQVVDNLISNAIKYTETGGSVMVELYCRTRGNIFDPSAPNDTHAGCGEQDDDAGDASLEEPFRSEEEWEVEIVVRDTGVGIYIEDQEVVFDRFMQANSSMQ----GAGLGLSISRELACFMAGDVFLRYSHPGKGSTF 1713
++ I+ + DG W+W+ N+E+MS RFW ILG +YR P W +I EDLE A + H T+G PY +V Y H G V V CRG V+EW DG RM+GTHTD+T++ EA + K +F++ +SHE+R+P++ ++ +LL ++ ++E L L ND+L K+ + + L +ST + E Q Q K + S A + ++ D + Q++ NL+SNA+K+TE G V V C + + D + + + DTG+G+ + + E +F+ F Q + G GLGL+I + L + GD+ + S KGS F
Sbjct: 39 VDFIESSYDGFWDWYIQDNFEYMSPRFWEILGVDYRTKQHDPAEWQDLIFKEDLEIALENLRKHCETRGKHPYRQEVRYRHADGSTVTVLCRGRVIEWGEDGEALRMIGTHTDVTQLKEAQKELAAASQFKSQFLANVSHELRSPLNTLILLIQLLRNNSEKNLSEKQLENLEQIHISANDLHLLVNDLLDHSKIEKG-IIDLEAKSTPISEIASSIHSMFESQFQSKGVDFSCTADD-LEGEIVTDRRRLEQIIRNLVSNALKFTEVSGRVDV---CFSWEELKDGRI-------------------------------LVVSIHDTGIGMEVYELEDIFNPFNQGEEGRKNHYMGTGLGLAIVKHLTELLGGDISVS-SVKEKGSIF 390
BLAST of mRNA_H-elongata_contig7307.14985.1 vs. uniprot
Match: D3RSZ9_ALLVD (Signal transduction histidine kinase with CheB and CheR activity n=2 Tax=Allochromatium vinosum TaxID=1049 RepID=D3RSZ9_ALLVD) HSP 1 Score: 176 bits (447), Expect = 1.470e-40 Identity = 186/693 (26.84%), Postives = 282/693 (40.69%), Query Frame = 1
Query: 616 LIDLASDGVWEWFPSLNYEFMSKRFWGILGYNYREMPSSPEAWGSIIDPEDLEKATTCFKAHVATKGVTPYNMDVSYTHRKGHAVKVKCRGAVVEWLPDGTPWRMLGTHTDITEITEAVEA--------------KVRFVSRISHEIRTPISAILHECELLDKYADTAVTED-------ACAQLLSLCNDILTVEKLSRPKALKLVTQSTSLKEFLHKAIRRNHGQAQKKRLVLSGKAHTPVTLRLMMDVGKCNQVVDNLISNAIKYTETGGSVMVELYCRTRGNIFDPSAPNDTHAGCGEQDDDAGDASLEEPFRSEEEWEVEIVVRDTGVGIYIEDQEVVFDRFMQANSSMQ----GAGLGLSISRELACFMAGDVFLRYSHPGKGSTFVFS------------------------------------------FRASLAPKKSATQPSLTAATLAVGT-------------SEAVGTARRVGSGAGRTG-----------------NYEGQPEAV--------------------GKAGTKREYRCGKSNSDIPVNGDKGSTGVPIIRILSADDMLTNRKIIRRRLLTIQEQLGPRSIEVVDAVDGRDAVRVFRDL--GSFDVVFMDCLMPEMNGFDATRAIHRLCEERNIARVPVVAITASVSAALYRECMEAGMCQVVTKPFKTLDLL 2337
L+D + G ++W + E++S F + GY E+P++PE+W +I PEDL ++ HV + G PY+ +V Y H+ G + V C G VV+W PDG P R++G H DIT + + +A K F++ +SHEIRTP++A+L C LL++ A + D A LL L NDIL K+ L++ + L E L A K L L L+ D G+ QV+ NL+ NAIK+T G VEL +E+ + ++ VRDTG+GI E Q +F+ F QA++S+ G GLGL+IS+ L M G + L S G+GS F F+ +R LA +A Q L AA LA+ T + + AR + + + G E QPE G +R Y +N++ ++ + S + +R+L DD N+++ L+ Q V D +A + D + D+V MD MP ++G+ ATR RL +R +PV+A+TA ++ AGM V KPF L+
Sbjct: 1105 LLDTSFAGYFDWNIAEGTEYLSPTFKRMFGYADDELPNTPESWQRLIFPEDLPGVFEVYERHVRSHGSVPYHNEVRYRHKDGRTIWVICAGLVVDWTPDGEPRRLIGYHIDITALKQVEQALSEARDQANASNLAKSAFLANMSHEIRTPMNAVLGFCYLLEQRALDPTSADLVRKIHGAGQALLGLINDILDFSKIEAGH-LEIESTPFQLSELLDTLAGIMTAAAGDKPLELVLTPPGEGIEGLIGDAGRLQQVLINLLGNAIKFTARGE---VEL-------------------------------RVEQVAEHGDRLDLRFTVRDTGIGIAPEHQTNIFNAFSQADNSIGRRFGGTGLGLAISQRLVHMMGGRLELE-STLGQGSAFYFTLALQRDPNAPDPAAELGRLRLLVVEDCATAGAALVQTARALGWRVDLADSSAAAQEHL-AARLALPTPYDAVLIDWRMPGEDGLSCARALRAAVAKKGLAGSPALMLMTSAQSRPALEAQPEIAMIDAILDKPVTPSSLYNALASLRGARRRY----ANTNRLLSVGRRSRQLAGLRVLMVDDSEINQEVASGILVGHGAQ--------VSVADDGEAALAWLDAHPDAVDIVLMDVQMPRLDGYAATR---RLRLDRRWRNLPVIALTAGAFQSMQEAARAAGMNDFVAKPFNVAQLI 1745 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig7307.14985.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig7307.14985.1 >prot_H-elongata_contig7307.14985.1 ID=prot_H-elongata_contig7307.14985.1|Name=mRNA_H-elongata_contig7307.14985.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=737bp MDVFSRDDLLTVVELSSICIGVFDDRKGRVHSLNKALKTEVQRTEFGVTVback to top mRNA from alignment at H-elongata_contig7307:895..7711- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig7307.14985.1 ID=mRNA_H-elongata_contig7307.14985.1|Name=mRNA_H-elongata_contig7307.14985.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=6817bp|location=Sequence derived from alignment at H-elongata_contig7307:895..7711- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig7307:895..7711- >mRNA_H-elongata_contig7307.14985.1 ID=mRNA_H-elongata_contig7307.14985.1|Name=mRNA_H-elongata_contig7307.14985.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=4422bp|location=Sequence derived from alignment at H-elongata_contig7307:895..7711- (Himanthalia elongata Himel1 dioecious)back to top |