mRNA_H-elongata_contig72870.14970.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig72870.14970.1 vs. uniprot
Match: D8LHF5_ECTSI (Lipase_3 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHF5_ECTSI) HSP 1 Score: 133 bits (334), Expect = 5.980e-34 Identity = 63/89 (70.79%), Postives = 75/89 (84.27%), Query Frame = 1
Query: 40 TQVGLIQLISCSTAGKALQLSCHMLEGTICDIVRHCGDDRGRFTDCKFEYNMAHLLPQLLKLAQGKMIWVMGVAALILIIATLVILPEF 306
TQVGLIQLISC TAGKALQLSCHMLEGTICDI+RHCGDDRGRFT+CKFEYNM+HL+PQ+L L QG+ +W+ + L + A L+ + EF
Sbjct: 904 TQVGLIQLISCDTAGKALQLSCHMLEGTICDIIRHCGDDRGRFTNCKFEYNMSHLVPQMLILLQGRWVWIGALLLLTGVAAMLLFVSEF 992
BLAST of mRNA_H-elongata_contig72870.14970.1 vs. uniprot
Match: A0A7S2V565_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V565_9STRA) HSP 1 Score: 90.9 bits (224), Expect = 3.340e-21 Identity = 42/94 (44.68%), Postives = 63/94 (67.02%), Query Frame = 1
Query: 22 PLSLSSTQVGLIQLISCSTAGKALQLSCHMLEGTICDIVRHCGDDRGRFTDCKFEYNMAHLLPQLLKLAQGKMIWVMGVAALILIIATLVILPE 303
P+S+ TQVGL+Q I CS++ A+Q +CHM+EGT+C+++ HCGD RGRFT C + YN+ LLP + W++ ++LI+ V+LPE
Sbjct: 48 PISMVDTQVGLVQHIMCSSSRLAIQNACHMIEGTLCELLSHCGDPRGRFTGCTYRYNVGALLPFVWNFLDDYFYWMLPGLGILLILGGSVLLPE 141
BLAST of mRNA_H-elongata_contig72870.14970.1 vs. uniprot
Match: A0A7S3XTY2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XTY2_HETAK) HSP 1 Score: 84.3 bits (207), Expect = 3.780e-17 Identity = 40/94 (42.55%), Postives = 58/94 (61.70%), Query Frame = 1
Query: 22 PLSLSSTQVGLIQLISCSTAGKALQLSCHMLEGTICDIVRHCGDDRGRFTDCKFEYNMAHLLPQLLKLAQGKMIWVMGVAALILIIATLVILPE 303
P++ TQVG IQ I C + AL +CHMLEGT+C+++ HCGD RGRFT C++EYN+ L+P + W++ L+ + L I+PE
Sbjct: 248 PVARVDTQVGNIQHIMCKSESLALTNACHMLEGTLCELLAHCGDHRGRFTRCEYEYNIGSLVPFFWGFIDDYIFWLLPGVGLLFVFGALAIIPE 341
BLAST of mRNA_H-elongata_contig72870.14970.1 vs. uniprot
Match: A0A6A5ACD0_9STRA (Lipase_3 domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5ACD0_9STRA) HSP 1 Score: 79.7 bits (195), Expect = 7.200e-16 Identity = 32/61 (52.46%), Postives = 49/61 (80.33%), Query Frame = 1
Query: 22 PLSLSSTQVGLIQLISCSTAGKALQLSCHMLEGTICDIVRHCGDDRGRFTDCKFEYNMAHL 204
P+++ TQ GLIQ I+C T ++QLSCHM++GT+C++++HCGDDRGRF+ C+FE+ + L
Sbjct: 131 PVTMIDTQSGLIQRITCDTPHLSMQLSCHMIQGTLCNLLQHCGDDRGRFSSCQFEHRITSL 191
BLAST of mRNA_H-elongata_contig72870.14970.1 vs. uniprot
Match: A0A5D6XN61_9STRA (Lipase_3 domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XN61_9STRA) HSP 1 Score: 78.2 bits (191), Expect = 1.200e-14 Identity = 38/89 (42.70%), Postives = 60/89 (67.42%), Query Frame = 1
Query: 22 PLSLSSTQVGLIQLISCSTAGKALQLSCHMLEGTICDIVRHCGDDRGRFTDCKFEYNMAH----LLPQLLKLAQGKMIWVMGVAALILI 276
P+++ Q G++Q ISC T ++QLSCHMLEGTIC+++ +CGD RGR + C+FE+ +A +LP+L + +++ M V A IL+
Sbjct: 799 PVTMIDVQAGMVQKISCDTPNLSMQLSCHMLEGTICNLLENCGDPRGRISACRFEHKIASVTDDMLPKLAAVLSPEVLVTMAVTAAILL 887
BLAST of mRNA_H-elongata_contig72870.14970.1 vs. uniprot
Match: K3WLR8_GLOUD (Lipase_3 domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WLR8_GLOUD) HSP 1 Score: 77.8 bits (190), Expect = 1.630e-14 Identity = 36/69 (52.17%), Postives = 50/69 (72.46%), Query Frame = 1
Query: 22 PLSLSSTQVGLIQLISCSTAGKALQLSCHMLEGTICDIVRHCGDDRGRFTDCKFEYNMAH----LLPQL 216
P+++ Q GLIQ ISC T ++QLSCHMLEGT+C+++ HCGD +GR + CKFE+ +A LLP+L
Sbjct: 730 PVTMIDAQAGLIQKISCDTPHLSMQLSCHMLEGTVCNLLEHCGDAQGRISSCKFEHKIASATDDLLPKL 798
BLAST of mRNA_H-elongata_contig72870.14970.1 vs. uniprot
Match: A0A3M6VSC6_9STRA (Lipase_3 domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VSC6_9STRA) HSP 1 Score: 77.4 bits (189), Expect = 2.250e-14 Identity = 37/81 (45.68%), Postives = 54/81 (66.67%), Query Frame = 1
Query: 22 PLSLSSTQVGLIQLISCSTAGKALQLSCHMLEGTICDIVRHCGDDRGRFTDCKFEYNMAH----LLPQLLKLAQGKMIWVM 252
P+++ Q G+IQ ISC T ++QLSCHMLEGTIC++V HCG RGR + C FE+N+A ++P +L + I+V+
Sbjct: 818 PITMIDAQAGMIQKISCDTPHLSMQLSCHMLEGTICNLVEHCGSARGRISSCLFEHNIARATEDMIPNVLPIISKPEIYVL 898
BLAST of mRNA_H-elongata_contig72870.14970.1 vs. uniprot
Match: A0A6G0XXD1_9STRA (Lipase_3 domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XXD1_9STRA) HSP 1 Score: 76.6 bits (187), Expect = 4.140e-14 Identity = 31/61 (50.82%), Postives = 46/61 (75.41%), Query Frame = 1
Query: 22 PLSLSSTQVGLIQLISCSTAGKALQLSCHMLEGTICDIVRHCGDDRGRFTDCKFEYNMAHL 204
P+++ TQ GLIQ I+C T ++QLSCHM++GT+C+++ HCGDDR RF C+FE+ + L
Sbjct: 731 PITMIDTQSGLIQRITCDTPHLSMQLSCHMIQGTLCNLLHHCGDDRARFATCQFEHRITSL 791
BLAST of mRNA_H-elongata_contig72870.14970.1 vs. uniprot
Match: A0A485KXN8_9STRA (Aste57867_12985 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KXN8_9STRA) HSP 1 Score: 76.6 bits (187), Expect = 4.140e-14 Identity = 32/65 (49.23%), Postives = 48/65 (73.85%), Query Frame = 1
Query: 22 PLSLSSTQVGLIQLISCSTAGKALQLSCHMLEGTICDIVRHCGDDRGRFTDCKFEYNMAHLLPQL 216
P+++ +Q GLIQ I+C T ++QLSCHM++GT+C+++ HCGDDRGRF C+FE+ + L L
Sbjct: 733 PITMVDSQSGLIQRITCDTPHLSMQLSCHMIQGTLCNLLDHCGDDRGRFAACEFEHRITSLTEDL 797
BLAST of mRNA_H-elongata_contig72870.14970.1 vs. uniprot
Match: A0A1V9Y4V9_9STRA (Transmembrane protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Y4V9_9STRA) HSP 1 Score: 76.3 bits (186), Expect = 5.650e-14 Identity = 36/95 (37.89%), Postives = 63/95 (66.32%), Query Frame = 1
Query: 22 PLSLSSTQVGLIQLISCSTAGKALQLSCHMLEGTICDIVRHCGDDRGRFTDCKFEYNMAHLLPQLLKLAQGKMIWVMGVAALILIIATLVILPEF 306
P+++ TQ GLIQ I+C ++ ++QLSCHM EGT+C++V+HCGD RGRF C FE+ ++ L L ++ ++ ++ L++++A + L +
Sbjct: 739 PITMIDTQSGLIQRITCDSSHLSMQLSCHMNEGTLCNLVQHCGDHRGRFAACDFEHRVSTLSEDLFEMVFVDLVAPTTLSGLMILVAIIFSLVRY 833 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig72870.14970.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig72870.14970.1 >prot_H-elongata_contig72870.14970.1 ID=prot_H-elongata_contig72870.14970.1|Name=mRNA_H-elongata_contig72870.14970.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=105bp TCTLRSRPLSLSSTQVGLIQLISCSTAGKALQLSCHMLEGTICDIVRHCGback to top mRNA from alignment at H-elongata_contig72870:2301..2901- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig72870.14970.1 ID=mRNA_H-elongata_contig72870.14970.1|Name=mRNA_H-elongata_contig72870.14970.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=601bp|location=Sequence derived from alignment at H-elongata_contig72870:2301..2901- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig72870:2301..2901- >mRNA_H-elongata_contig72870.14970.1 ID=mRNA_H-elongata_contig72870.14970.1|Name=mRNA_H-elongata_contig72870.14970.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=630bp|location=Sequence derived from alignment at H-elongata_contig72870:2301..2901- (Himanthalia elongata Himel1 dioecious)back to top |