mRNA_H-elongata_contig72799.14957.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig72799.14957.1 vs. uniprot
Match: A0A6H5JFR3_9PHAE (1,3-beta-glucan synthase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFR3_9PHAE) HSP 1 Score: 219 bits (558), Expect = 7.720e-64 Identity = 111/121 (91.74%), Postives = 117/121 (96.69%), Query Frame = 1
Query: 1 MGLLNTMPMLATLTVEKGLLQALGEVIQVFISGGPMYFMFHIQTRAHYFYQTLLAGGAQYRATGRGFVIHHSRFDDLYRFFANSHFYLGFELMMALILTAAMTSSKQYLGITWSLCLACIS 363
MGLLNTMPMLATLTVEKGLL ALGEV+QVF+SGGPMYFMFHIQTRAHYFYQTLLAGGAQYRATGRGFV HHS FDDLYRFFANSHFYLGFELM+ALI+TAAMTSSKQYLG+TWSL LAC+S
Sbjct: 1743 MGLLNTMPMLATLTVEKGLLVALGEVLQVFLSGGPMYFMFHIQTRAHYFYQTLLAGGAQYRATGRGFVTHHSCFDDLYRFFANSHFYLGFELMVALIVTAAMTSSKQYLGMTWSLWLACLS 1863
BLAST of mRNA_H-elongata_contig72799.14957.1 vs. uniprot
Match: D7FR93_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR93_ECTSI) HSP 1 Score: 172 bits (437), Expect = 1.030e-53 Identity = 86/91 (94.51%), Postives = 88/91 (96.70%), Query Frame = 1
Query: 1 MGLLNTMPMLATLTVEKGLLQALGEVIQVFISGGPMYFMFHIQTRAHYFYQTLLAGGAQYRATGRGFVIHHSRFDDLYRFFANSHFYLGFE 273
MGLLNTMPMLATLTVEKGLL ALGEV+QVF+SGGPMYFMFHIQTRAHYFYQTLLAGGAQYRATGRGFV HHS FDDLYRFFANSHFYLGFE
Sbjct: 7 MGLLNTMPMLATLTVEKGLLVALGEVLQVFLSGGPMYFMFHIQTRAHYFYQTLLAGGAQYRATGRGFVTHHSCFDDLYRFFANSHFYLGFE 97
BLAST of mRNA_H-elongata_contig72799.14957.1 vs. uniprot
Match: A0A835Z4B5_9STRA (1,3-beta-glucan synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4B5_9STRA) HSP 1 Score: 189 bits (480), Expect = 2.460e-53 Identity = 97/121 (80.17%), Postives = 105/121 (86.78%), Query Frame = 1
Query: 1 MGLLNTMPMLATLTVEKGLLQALGEVIQVFISGGPMYFMFHIQTRAHYFYQTLLAGGAQYRATGRGFVIHHSRFDDLYRFFANSHFYLGFELMMALILTAAMTSSKQYLGITWSLCLACIS 363
MG+LNT+PMLATL VEKGL AL V QVF+SGGPMYFMFHIQTRAHYFYQTLLAGGAQYRATGRGFV HHS FDDLYRFFA SHFYLGFEL +AL++ A MTS+ QY G TWSL LAC+S
Sbjct: 1430 MGVLNTLPMLATLMVEKGLRAALITVGQVFVSGGPMYFMFHIQTRAHYFYQTLLAGGAQYRATGRGFVTHHSSFDDLYRFFATSHFYLGFELGVALVIMAFMTSAHQYFGRTWSLWLACVS 1550
BLAST of mRNA_H-elongata_contig72799.14957.1 vs. uniprot
Match: A0A835Z1S2_9STRA (1,3-beta-glucan synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1S2_9STRA) HSP 1 Score: 189 bits (479), Expect = 3.380e-53 Identity = 97/121 (80.17%), Postives = 105/121 (86.78%), Query Frame = 1
Query: 1 MGLLNTMPMLATLTVEKGLLQALGEVIQVFISGGPMYFMFHIQTRAHYFYQTLLAGGAQYRATGRGFVIHHSRFDDLYRFFANSHFYLGFELMMALILTAAMTSSKQYLGITWSLCLACIS 363
MG+LNT+PMLATL VEKGL AL V QVF+SGGPMYFMFHIQTRAHYFYQTLLAGGAQYRATGRGFV HHS FDDLYRFFA SHFYLGFEL ALI+ A +++KQY+G TWSL LACIS
Sbjct: 1829 MGVLNTLPMLATLMVEKGLRAALVVVGQVFVSGGPMYFMFHIQTRAHYFYQTLLAGGAQYRATGRGFVTHHSTFDDLYRFFATSHFYLGFELAAALIIMACTSAAKQYIGRTWSLWLACIS 1949
BLAST of mRNA_H-elongata_contig72799.14957.1 vs. uniprot
Match: A0A8J2T241_9STRA (1,3-beta-glucan synthase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2T241_9STRA) HSP 1 Score: 159 bits (403), Expect = 5.860e-43 Identity = 84/119 (70.59%), Postives = 94/119 (78.99%), Query Frame = 1
Query: 1 MGLLNTMPMLATLTVEKGLLQALGEVIQVFISGGPMYFMFHIQTRAHYFYQTLLAGGAQYRATGRGFVIHHSRFDDLYRFFANSHFYLGFELMMALILTAAMTSSKQYLGITWSLCLAC 357
+GLLNT+P+LATL VE+GLL A +V QVF SGGP+YF+FHIQTRAHYF QTLLAGGA YRATGRGFV H+ FD+ YRFFA SH YLG EL AL L A T + QYLG TWSL LAC
Sbjct: 1809 LGLLNTLPLLATLAVERGLLAATRDVAQVFASGGPLYFVFHIQTRAHYFMQTLLAGGATYRATGRGFVTTHNSFDEQYRFFAASHLYLGVELAAALGLMGAHTQAGQYLGRTWSLWLAC 1927
BLAST of mRNA_H-elongata_contig72799.14957.1 vs. uniprot
Match: A0A7S2UV62_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UV62_9STRA) HSP 1 Score: 155 bits (393), Expect = 1.290e-41 Identity = 77/121 (63.64%), Postives = 97/121 (80.17%), Query Frame = 1
Query: 1 MGLLNTMPMLATLTVEKGLLQALGEVIQVFISGGPMYFMFHIQTRAHYFYQTLLAGGAQYRATGRGFVIHHSRFDDLYRFFANSHFYLGFELMMALILTAAMTSSKQYLGITWSLCLACIS 363
MG+L T+PM +TL VEKG+ A+G V+QVF SGGP+YFMFHIQT+++YF QTLLAG A+YR TGRGFV HS FD+ +RFFA+SHFYLGFEL++ALI+ T + Q+ G TWSL LA +S
Sbjct: 1207 MGILQTVPMFSTLAVEKGVASAVGTVLQVFFSGGPLYFMFHIQTKSYYFIQTLLAGNAKYRPTGRGFVTRHSSFDENFRFFASSHFYLGFELLVALIILGVTTKAHQFWGRTWSLWLADVS 1327
BLAST of mRNA_H-elongata_contig72799.14957.1 vs. uniprot
Match: A0A482SV99_9ARCH (FKS1_dom1 domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SV99_9ARCH) HSP 1 Score: 152 bits (383), Expect = 2.890e-40 Identity = 77/121 (63.64%), Postives = 93/121 (76.86%), Query Frame = 1
Query: 1 MGLLNTMPMLATLTVEKGLLQALGEVIQVFISGGPMYFMFHIQTRAHYFYQTLLAGGAQYRATGRGFVIHHSRFDDLYRFFANSHFYLGFELMMALILTAAMTSSKQYLGITWSLCLACIS 363
MG+L T+P+ TLTVEKG QA+ E+ + +SGGP+YF+FHIQT+++YF QTLLAGGA YR TGRGFV H+ FDD RFFA+SH YLGFEL ALI+ T SKQY G+TWSL LA IS
Sbjct: 1533 MGILQTLPLAVTLTVEKGFRQAISEIGFMILSGGPLYFIFHIQTKSYYFSQTLLAGGAMYRPTGRGFVTQHAPFDDTLRFFASSHIYLGFELAAALIIFGLYTKSKQYAGLTWSLWLASIS 1653
BLAST of mRNA_H-elongata_contig72799.14957.1 vs. uniprot
Match: F0YA81_AURAN (1,3-beta-glucan synthase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YA81_AURAN) HSP 1 Score: 152 bits (383), Expect = 2.910e-40 Identity = 79/118 (66.95%), Postives = 91/118 (77.12%), Query Frame = 1
Query: 1 MGLLNTMPMLATLTVEKGLLQALGEVIQVFISGGPMYFMFHIQTRAHYFYQTLLAGGAQYRATGRGFVIHHSRFDDLYRFFANSHFYLGFELMMALILTAAMTSSKQYLGITWSLCLA 354
+GLLNT+P+LATL VE+GL A +V QVF SGGP+YF+FHIQTRAHYF QT+LAGGA YRATGRGFV HS FD+ YRFFA SH +LG EL AL+L T + QY G TWSL LA
Sbjct: 1905 LGLLNTLPLLATLAVERGLWAAAKDVAQVFASGGPLYFIFHIQTRAHYFTQTILAGGATYRATGRGFVTRHSTFDEQYRFFAASHLHLGVELSAALVLMGLHTGAGQYAGRTWSLWLA 2022
BLAST of mRNA_H-elongata_contig72799.14957.1 vs. uniprot
Match: A0A7S2QVX6_9STRA (1,3-beta-glucan synthase (Fragment) n=1 Tax=Triparma pacifica TaxID=91992 RepID=A0A7S2QVX6_9STRA) HSP 1 Score: 151 bits (381), Expect = 5.390e-40 Identity = 75/121 (61.98%), Postives = 94/121 (77.69%), Query Frame = 1
Query: 1 MGLLNTMPMLATLTVEKGLLQALGEVIQVFISGGPMYFMFHIQTRAHYFYQTLLAGGAQYRATGRGFVIHHSRFDDLYRFFANSHFYLGFELMMALILTAAMTSSKQYLGITWSLCLACIS 363
MGL+NT+P+ ATL VE+G ++ E+ QVF++GGP++FMFHIQT+AHYF QT+L GGA+YRATGRGFV HS F + +RFFA+SH YLG EL AL+L T + QY G TWSL LACIS
Sbjct: 1653 MGLMNTIPLFATLGVERGWWASMMEIFQVFVTGGPLHFMFHIQTKAHYFAQTILVGGAKYRATGRGFVTQHSPFAENFRFFASSHLYLGVELSAALVLMGVYTDAGQYFGRTWSLWLACIS 1773
BLAST of mRNA_H-elongata_contig72799.14957.1 vs. uniprot
Match: A0A7S3H8Z7_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H8Z7_9STRA) HSP 1 Score: 150 bits (380), Expect = 7.100e-40 Identity = 74/121 (61.16%), Postives = 96/121 (79.34%), Query Frame = 1
Query: 1 MGLLNTMPMLATLTVEKGLLQALGEVIQVFISGGPMYFMFHIQTRAHYFYQTLLAGGAQYRATGRGFVIHHSRFDDLYRFFANSHFYLGFELMMALILTAAMTSSKQYLGITWSLCLACIS 363
MG+L TMP+L TLTVEKG+L A+ E+ + +SGGP+YF+FHI+T+++YF QTL+AGGA+YR TGR FV HS FD+ +RFFA+SH YLGFE+ +AL+L TSS QY G+TWSL L IS
Sbjct: 267 MGILQTMPLLITLTVEKGVLAAISEIGFMILSGGPLYFIFHIETKSYYFSQTLMAGGAKYRPTGRAFVTSHSSFDENFRFFASSHIYLGFEIFIALVLFGVYTSSTQYFGLTWSLWLTVIS 387 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig72799.14957.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig72799.14957.1 >prot_H-elongata_contig72799.14957.1 ID=prot_H-elongata_contig72799.14957.1|Name=mRNA_H-elongata_contig72799.14957.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=121bp MGLLNTMPMLATLTVEKGLLQALGEVIQVFISGGPMYFMFHIQTRAHYFYback to top mRNA from alignment at H-elongata_contig72799:891..2482+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig72799.14957.1 ID=mRNA_H-elongata_contig72799.14957.1|Name=mRNA_H-elongata_contig72799.14957.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1592bp|location=Sequence derived from alignment at H-elongata_contig72799:891..2482+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig72799:891..2482+ >mRNA_H-elongata_contig72799.14957.1 ID=mRNA_H-elongata_contig72799.14957.1|Name=mRNA_H-elongata_contig72799.14957.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=726bp|location=Sequence derived from alignment at H-elongata_contig72799:891..2482+ (Himanthalia elongata Himel1 dioecious)back to top |