mRNA_H-elongata_contig72783.14955.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig72783.14955.1 vs. uniprot
Match: A0A6H5LEA9_9PHAE (DAO domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LEA9_9PHAE) HSP 1 Score: 411 bits (1056), Expect = 8.440e-133 Identity = 233/404 (57.67%), Postives = 279/404 (69.06%), Query Frame = 1
Query: 1 TSASGLVHDSGGSSVDAVLLEDGRKFHAKAYVSATGAWMRELMPVPMLPHKGQMMALRQPGGIRREG---DAGAIGLRRVFFAEGCYIIPKRDGRVVVGSTVEIGEYGRHNTPAGIKHIIDAAIKVCPALGDLAIDRTWAGLRPSTPDTMPVLGPFPQCRNLFIAGGYWRNGVLLAPKAAQLVADTVCGCLPPQDEVFLRTFTVDRLITSDGQRTPAQA---EPAVVSAATPAIQPPS-----------AEAYSSELSQSDLLGMERAALEGSNDGGMFSGLEGLGTQATAIEEVSGQDHRRFSFSGNEENTSSLPVVDSAVPSAPREPVNDYDGSDRFSESSLKEARLANRLVQK-GSDARLEALFGDGPDESSIPDANMVDMNVKAWEDGAEEVAKILGAKV 1158
T+A+ LV+DS G+SVDAV+LEDGR+ HA A VSATGAWMRELMPVPM+PHKGQMMALR+P G G G IGL RVFFAEGCYIIPKRDGRVVVGSTVE+GEYG +NTPAGIK IIDAA+KVCPAL DLAI+RTWAGLRP TPD PVLG P+C NLF+AGGYWRNGVLLAPK AQLVAD VCG L PQDE FL+ F++DR T G+ A A +P AA Q P+ AE + SE S S++L MERAALEG+ND + S LEG+ + EV D R S + +EPVNDY S++FSE LKEAR+ANR++Q+ SDARLE++FG GP+E+ + N+ +W+DGA EVA I+GA++
Sbjct: 232 TAAASLVYDSEGTSVDAVVLEDGRQVHANAVVSATGAWMRELMPVPMVPHKGQMMALREPAGGLGAGAPRQGGGIGLTRVFFAEGCYIIPKRDGRVVVGSTVEVGEYGIYNTPAGIKQIIDAAVKVCPALADLAIERTWAGLRPVTPDCFPVLGASPRCPNLFVAGGYWRNGVLLAPKTAQLVADAVCGLLSPQDESFLQEFSMDRF-TKLGESAAAAARDDKPRAQPAAAVEPQRPAPTGTFSSSGSRAEGFISEASPSEVLEMERAALEGANDASILSALEGMFGEGMVPVEVEEDDASRDVPSTHASXXXXXXXXXXXXXKV-QEPVNDYHASEQFSEEKLKEARMANRMLQEDSSDARLESVFGGGPEEAGFSEGIA---NINSWDDGAAEVASIIGAEL 630
BLAST of mRNA_H-elongata_contig72783.14955.1 vs. uniprot
Match: A0A835ZBS5_9STRA (Glycine oxidase thio n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBS5_9STRA) HSP 1 Score: 248 bits (632), Expect = 8.430e-72 Identity = 165/409 (40.34%), Postives = 219/409 (53.55%), Query Frame = 1
Query: 1 TSASGLVHDSGGSSVDAVLLEDGRKFHAKAYVSATGAWMRELMPVPMLPHKGQMMALRQPGGIRREGDAGAIGLRRVFFAEGCYIIPKRDGRVVVGSTVEIGEYGRHNTPAG------IKHIIDAAIKVCPALGDLAIDRTWAGLRPSTPDTMPVLGPFPQCRNLFIAGGYWRNGVLLAPKAAQLVADTVCGCLPPQDEVFLRTFTVDRLITSDGQRTPAQAEPAVVSAATPAIQPPSAEAYSSELSQSDLLGMERAALEGSNDGGM-FSGLEGL------GTQATAIEEVS------GQDHRRFSFSGNEENTSSLPVVDSAVPSAPREPVNDYDGSDRFSESSLKEARLANRLVQKGSDARLEALFG----DGPDESSIPDANMVDMNVKAWEDGAEEVAKILGAKV 1158
T+A GLV+++ G + AV+L DGR+ +A V A GAWMREL+PVPM HKGQMMALR P G+++ RV FAE YIIPKRDGRVVVG+TVE ++ H TPAG + +I A KVCPAL +AI+ TWAGLRP PD+MPVLG +CRN+F+AGGYWRNGVLLAP+ QLVAD V L D L F+ DR + G R A AE ++ A +G +G++ GGM F GL G+ G +E G D ++ + + + T + A+ + PV DYD FSE +LKEAR +NR L+ +F D D+S + A+ AW+D A A+ +GA++
Sbjct: 134 TAARGLVYNATGKAAAAVVLSDGRQVKCEAVVGAMGAWMRELLPVPMTSHKGQMMALRSPSGLQKAIPG------RVLFAEDAYIIPKRDGRVVVGATVERDDWSLHTTPAGKGAATGLARLIANATKVCPALAHMAIEETWAGLRPVAPDSMPVLGASERCRNVFLAGGYWRNGVLLAPRTGQLVADAVMNELSVADRTVLGAFSSDRFL---GARKGAAAERSLGGIA---------------------VGFAGTVSKGASKGGMAFDGLYGMFGAGGRGYIPPELEHAEEEARGPGADAQQARDAADAQQTQA-----EALEESEEGPVTDYDAMPEFSEEALKEARRSNR--------NLDEIFSSYELDAQDQSELAAADATARPAYAWDDDALSQAQSVGAEL 499
BLAST of mRNA_H-elongata_contig72783.14955.1 vs. uniprot
Match: W7U8T7_9STRA (Glycine oxidase n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U8T7_9STRA) HSP 1 Score: 192 bits (488), Expect = 5.800e-52 Identity = 99/193 (51.30%), Postives = 127/193 (65.80%), Query Frame = 1
Query: 43 VDAVLLEDGRKFHAKAYVSATGAWMRELMPVPMLPHKGQMMALRQPGGIRREGDAGAIGLRRVFFAEGCYIIPKRDGRVVVGSTVEIGEYGRHNTPAGIKHIIDAAIKVCPALGDLAIDRTWAGLRPSTPDTMPVLGPFPQCRNLFIAGGYWRNGVLLAPKAAQLVADTVCGCLPPQDEVFLRTFTVDRLITS 621
V AV + DGR+ V A GAWM L+PVP+ P KGQM++LR ++G+ L RV FAE CY+IPK DGR++VG+TVE G++ R T GI + A+++CPALG+L ++ TWAGLRP+TPDT+PVLG P NLF+AGGYWRNGVLLAP+ QLVAD V G + D L F R + S
Sbjct: 262 VQAVKMSDGRRLSFAQVVVANGAWMNRLLPVPVGPVKGQMLSLRP-----KKGEPNP--LTRVIFAENCYLIPKADGRLIVGATVEAGQWDRGVTAKGIHDLTQRALQICPALGNLELEETWAGLRPTTPDTLPVLGSTPW-ENLFVAGGYWRNGVLLAPRTGQLVADCVEGKVGADDAALLSHFAWSRFLPS 446
BLAST of mRNA_H-elongata_contig72783.14955.1 vs. uniprot
Match: A0A7S0BWK6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0BWK6_9STRA) HSP 1 Score: 186 bits (473), Expect = 2.010e-51 Identity = 89/192 (46.35%), Postives = 129/192 (67.19%), Query Frame = 1
Query: 52 VLLEDGRKFHAKAYVSATGAWMRELMPVPMLPHKGQMMALRQPGGIRREGDAGAIGLRRVFFAEGCYIIPKRDGRVVVGSTVEIGEYGRHNTPAGIKHIIDAAIKVCPALGDLAIDRTWAGLRPSTPDTMPVLGPFPQCRNLFIAGGYWRNGVLLAPKAAQLVADTVCGCLPPQDEVFLRTFTVDRLITSDG 627
V + G ++A A + A G+WMR+L+P+P++ HKGQ ++RQP G L RV FA+ YI+PK DGR++VG+TVE+G+Y TP G+ H ++AA+++ PAL DL I+ +W G+RP+TPD +PVLG P N+F+AGGYWRNGVLLAPK QL++D V + +D+V L F +R + +G
Sbjct: 84 VRTKGGLTYNASAVLVANGSWMRDLLPLPVVAHKGQSFSVRQP-------KHGPPLLNRVLFAQDTYIVPKADGRIIVGATVEVGDYSHDITPRGMMHCMNAAMELLPALADLPIEESWCGMRPTTPDKVPVLGATPW-GNVFVAGGYWRNGVLLAPKTGQLISDLVNQNVADKDQVLLDAFAWERFMEKEG 267
BLAST of mRNA_H-elongata_contig72783.14955.1 vs. uniprot
Match: A0A4D9DFC1_9STRA (DAO domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DFC1_9STRA) HSP 1 Score: 192 bits (489), Expect = 9.980e-51 Identity = 99/193 (51.30%), Postives = 124/193 (64.25%), Query Frame = 1
Query: 43 VDAVLLEDGRKFHAKAYVSATGAWMRELMPVPMLPHKGQMMALRQPGGIRREGDAGAIGLRRVFFAEGCYIIPKRDGRVVVGSTVEIGEYGRHNTPAGIKHIIDAAIKVCPALGDLAIDRTWAGLRPSTPDTMPVLGPFPQCRNLFIAGGYWRNGVLLAPKAAQLVADTVCGCLPPQDEVFLRTFTVDRLITS 621
V AV + DGR+ V A GAWM L+PVP+ P KGQM++LR G L RV FAE CY+IPK DGR++VG+TVE G++ R T GI + A+++CPALG L ++ TWAGLRP+TPDT+PVLG P NLF+AGGYWRNGVLLAP+ QLVAD V G + +D L F R + S
Sbjct: 194 VQAVKMSDGRRLSFAQVVVANGAWMNRLLPVPVGPVKGQMLSLRPKRGEPNP-------LTRVIFAENCYLIPKADGRLIVGATVEAGQWDRGVTAKGIHDLTQRALQICPALGSLELEETWAGLRPTTPDTLPVLGSTPW-ENLFVAGGYWRNGVLLAPRTGQLVADCVEGKVGAEDAALLSHFAWSRFLPS 378
BLAST of mRNA_H-elongata_contig72783.14955.1 vs. uniprot
Match: A0A7S1YUL8_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1YUL8_9STRA) HSP 1 Score: 190 bits (483), Expect = 2.480e-50 Identity = 98/193 (50.78%), Postives = 119/193 (61.66%), Query Frame = 1
Query: 31 GGSSVDAVLLEDGRKFHAKAYVSATGAWMRELMPVPMLPHKGQMMALRQPGGIRREGDAGAIGLRRVFFAEGCYIIPKRDGRVVVGSTVEIGEYGRHNTPAGIKHIIDAAIKVCPALGDLAIDRTWAGLRPSTPDTMPVLGPFPQCRNLFIAGGYWRNGVLLAPKAAQLVADTVCGCLPPQDEVFLRTFTVDR 609
GG V L DGR + A G+WMR+L+PVP+ PHKGQ +LR P L RV FA+ YI+PK DGR+VVG+TVE G + +H TPAG+ H I A+ + P+L L I+ TW GLRP+TPD P+LG P NL IAGGYWRNGVLLAPK QL+AD V G L +DE L F DR
Sbjct: 106 GGGKCKEVRLSDGRILSPNTVIVANGSWMRDLLPVPITPHKGQSFSLRMPPNTPPI-------LSRVLFAQDTYIVPKADGRIVVGATVEAGTFDKHVTPAGLMHCISNALHLVPSLSTLPIEETWVGLRPTTPDKGPILGRTPWS-NLHIAGGYWRNGVLLAPKTGQLLADLVTGTLSEEDETLLDAFAWDR 290
BLAST of mRNA_H-elongata_contig72783.14955.1 vs. uniprot
Match: A0A7S1XRU6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XRU6_9STRA) HSP 1 Score: 176 bits (445), Expect = 7.740e-49 Identity = 89/180 (49.44%), Postives = 115/180 (63.89%), Query Frame = 1
Query: 100 ATGAWMRELMPVPMLPHKGQMMALRQPGGIRREGDAGAIGLRRVFFAEGCYIIPKRDGRVVVGSTVEI-GEYGRHNTPAGIKHIIDAAIKVCPALGDLAIDRTWAGLRPSTPDTMPVLGPFP---QCRNLFIAGGYWRNGVLLAPKAAQLVADTVCGCLPPQDEVFLRTFTVDRLITSDG 627
A+GAWMREL+PVPM P KGQMMALR P G A L RV F +G Y++PK DGR++VG+TVE + R TP G+ ++ +V P L + +D TWAGLRP+TPD +PVLG N++ AGGYWRNG+LL P A+QLV D + G L +D LR F+ DR + +DG
Sbjct: 1 ASGAWMRELLPVPMQPIKGQMMALRPPAG-----STSAQRLSRVLFGDGIYVVPKVDGRIIVGATVEPEAGFDRRVTPKGLAYLCGKLARVAPELTEYTVDETWAGLRPTTPDFLPVLGRASAQGMYENVYFAGGYWRNGMLLPPVASQLVVDQMAGTLSAEDAELLRHFSYDRFLAADG 175
BLAST of mRNA_H-elongata_contig72783.14955.1 vs. uniprot
Match: B7FRM1_PHATC (4a-hydroxytetrahydrobiopterin dehydratase n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FRM1_PHATC) HSP 1 Score: 186 bits (473), Expect = 1.540e-48 Identity = 97/193 (50.26%), Postives = 125/193 (64.77%), Query Frame = 1
Query: 52 VLLEDGRKFHAKAYVSATGAWMRELMPVPMLPHKGQMMALRQPGGIRREGDAGAIGLRRVFFAEGCYIIPKRDGRVVVGSTVEIGEYGRHNTPAGIKHIIDAAIKVCPALGDLAIDRTWAGLRPSTPDTMPVLGPFPQCRNLFIAGGYWRNGVLLAPKAAQLVADTVCGC-LPPQDEVFLRTFTVDRLITSDG 627
V L+ GR + + A GAWMR L+PVP+ PHKGQ ++LR P D I L+RV FA+ YI+PK DGR+VVG+TVE G Y + TP G+ HI+ A+++ PAL DL I+ TWAGLRP+TPD P+LG P NL++AGGYWRNGVLLAPK +L+A + G + QD+ L F DR DG
Sbjct: 552 VRLQSGRYLSCNSILVANGAWMRNLLPVPIEPHKGQSLSLRMPK------DRPPI-LKRVLFAQDSYIVPKADGRIVVGATVEAGSYDPNVTPGGLLHILTHALQLVPALKDLPIEETWAGLRPTTPDKGPILGKTPW-ENLYLAGGYWRNGVLLAPKTGELLAALMTGQEIDEQDQAMLDAFAWDRFTNKDG 736
BLAST of mRNA_H-elongata_contig72783.14955.1 vs. uniprot
Match: A0A7S3Q339_9STRA (Hypothetical protein n=4 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q339_9STRA) HSP 1 Score: 186 bits (471), Expect = 2.270e-48 Identity = 96/203 (47.29%), Postives = 126/203 (62.07%), Query Frame = 1
Query: 31 GGSSVDAVLLEDGRKFHAKAYVSATGAWMRELMPVPMLPHKGQMMALRQPGGIRREGDAGAIGLRRVFFAEGCYIIPKRDGRVVVGSTVEIGEYGRHNTPAGIKHIIDAAIKVCPALGDLAIDRTWAGLRPSTPDTMPVLGPFPQCRNLFIAGGYWRNGVLLAPKAAQLVADTV----CGCLPPQDEVFLRTFTVDRLITSDG 627
GG + + L+DGR A + V A G+WMR L+PVP+ PHKGQ ++R P D + L RV FA+ YI+PK DGR+V+G+TVE G + + TPAG+ H + A+++ P LGDL ++ TWAGLRP+TPD P+LG + NLFIAGGYWRNGVLLAPK QL+ D V +DE L F DR + G
Sbjct: 310 GGGNCKGIKLDDGRTLSASSVVVANGSWMRNLLPVPITPHKGQSFSVRMPA------DTEPV-LSRVLFAQDTYIVPKVDGRIVIGATVEAGSFDPNVTPAGLMHCMSNALQLVPGLGDLPVEETWAGLRPTTPDKGPILGRT-KWDNLFIAGGYWRNGVLLAPKTGQLIGDLVLNKGASLDDTEDEELLEAFKWDRFTVAGG 504
BLAST of mRNA_H-elongata_contig72783.14955.1 vs. uniprot
Match: K0SQG9_THAOC (DAO domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SQG9_THAOC) HSP 1 Score: 185 bits (470), Expect = 3.090e-48 Identity = 90/173 (52.02%), Postives = 115/173 (66.47%), Query Frame = 1
Query: 34 GSSVDAVLLEDGRKFHAKAYVSATGAWMRELMPVPMLPHKGQMMALRQPGGIRREGDAGAIGLRRVFFAEGCYIIPKRDGRVVVGSTVEIGEYGRHNTPAGIKHIIDAAIKVCPALGDLAIDRTWAGLRPSTPDTMPVLGPFPQCRNLFIAGGYWRNGVLLAPKAAQLVADTV 552
G + V L DGR + A+A V A G+WMRE++P+P+ PHKGQ +LR P EG GA L RV FA+ YI+PK DGR++VG+TVE G Y TP G+ H + A ++ P L +L I+ TWAGLRP+TPD PVLG Q N+++AGGYWRNGVLLAPK QLV +
Sbjct: 275 GGTCTGVHLADGRTYKARAVVVANGSWMREILPLPVTPHKGQSFSLRMP-----EGGGGAPMLSRVLFAQDTYIVPKADGRIIVGATVEPGRYDGDVTPEGLLHCLSEATRLVPGLAELPIEETWAGLRPTTPDKCPVLGRTEQFDNVYLAGGYWRNGVLLAPKTGQLVGGLI 442 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig72783.14955.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig72783.14955.1 >prot_H-elongata_contig72783.14955.1 ID=prot_H-elongata_contig72783.14955.1|Name=mRNA_H-elongata_contig72783.14955.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=386bp TSASGLVHDSGGSSVDAVLLEDGRKFHAKAYVSATGAWMRELMPVPMLPHback to top mRNA from alignment at H-elongata_contig72783:692..3063+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig72783.14955.1 ID=mRNA_H-elongata_contig72783.14955.1|Name=mRNA_H-elongata_contig72783.14955.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2372bp|location=Sequence derived from alignment at H-elongata_contig72783:692..3063+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig72783:692..3063+ >mRNA_H-elongata_contig72783.14955.1 ID=mRNA_H-elongata_contig72783.14955.1|Name=mRNA_H-elongata_contig72783.14955.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2316bp|location=Sequence derived from alignment at H-elongata_contig72783:692..3063+ (Himanthalia elongata Himel1 dioecious)back to top |