mRNA_H-elongata_contig72757.14950.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig72757.14950.1 vs. uniprot
Match: D8LMU3_ECTSI (Hydrolase_4 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMU3_ECTSI) HSP 1 Score: 339 bits (870), Expect = 9.070e-107 Identity = 167/198 (84.34%), Postives = 178/198 (89.90%), Query Frame = 1
Query: 19 SGADLARRGWYDKIVMAIVRPPRCKYTQEDMGPTVVPLHSGLAMKRKDFEVRNRRGLKLVCSQWRPAFAEDTSQLPCVVYLHGNSSARVDVIKTRSLTVLSAALCTVVSFDFSGSGMSEGDWVTLGYFEQHDVADVLAYLRSNNMASRYLLWGRSMGAASALLYAACYPSSNLCGLILDSPFSSFRRLARDLVTGGQV 612
S DLAR GWY+KIVMAIVRPPRCKY+ D+G V PL SGLAMKR+DFEVRN+RGLKLVCSQWRPAF EDTS+LPCVVYLHGNSSARVDV+KT SL VL A CTVVSFDFSGSGMSEGD+VTLGYFEQHDVADVLAYLRSN MASRYLLWGRSMGAASALLYAA YP+ +LCGLILDSPF SF+RLARDLVT GQV
Sbjct: 227 SAIDLARSGWYNKIVMAIVRPPRCKYSIGDLGNEVTPLSSGLAMKRRDFEVRNQRGLKLVCSQWRPAFTEDTSKLPCVVYLHGNSSARVDVVKTSSLRVLGTAACTVVSFDFSGSGMSEGDFVTLGYFEQHDVADVLAYLRSNGMASRYLLWGRSMGAASALLYAARYPNHDLCGLILDSPFCSFKRLARDLVTEGQV 424
BLAST of mRNA_H-elongata_contig72757.14950.1 vs. uniprot
Match: A0A6H5JRH5_9PHAE (Hydrolase_4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRH5_9PHAE) HSP 1 Score: 332 bits (851), Expect = 1.140e-103 Identity = 162/193 (83.94%), Postives = 174/193 (90.16%), Query Frame = 1
Query: 19 SGADLARRGWYDKIVMAIVRPPRCKYTQEDMGPTVVPLHSGLAMKRKDFEVRNRRGLKLVCSQWRPAFAEDTSQLPCVVYLHGNSSARVDVIKTRSLTVLSAALCTVVSFDFSGSGMSEGDWVTLGYFEQHDVADVLAYLRSNNMASRYLLWGRSMGAASALLYAACYPSSNLCGLILDSPFSSFRRLARDLV 597
S DLAR GWY+KIVMAIVRPPRCKY+ D+G V PL SGLAMKR+DFE+RN+RGLKLVCSQWRPAF EDTS+LPCVVYLHGNSSARVDV+KT SL VL A CTVVSFDFSGSGMSEGD+VTLGYFEQHDVADVLAYLRSN MASRYLLWGRSMGAASALLYAA YP+ +LCGLILDSPF SF+RLARDLV
Sbjct: 282 SAIDLARSGWYNKIVMAIVRPPRCKYSVGDLGNEVTPLSSGLAMKRRDFEIRNQRGLKLVCSQWRPAFTEDTSKLPCVVYLHGNSSARVDVVKTSSLRVLGTAACTVVSFDFSGSGMSEGDFVTLGYFEQHDVADVLAYLRSNGMASRYLLWGRSMGAASALLYAARYPNHDLCGLILDSPFCSFKRLARDLV 474
BLAST of mRNA_H-elongata_contig72757.14950.1 vs. uniprot
Match: A0A835YYX8_9STRA (Alpha/Beta hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYX8_9STRA) HSP 1 Score: 256 bits (655), Expect = 1.570e-77 Identity = 126/204 (61.76%), Postives = 157/204 (76.96%), Query Frame = 1
Query: 1 RRRRRSSGADLARRGWYDKIVMAIVRPPRCKYTQEDMGPTVVPLHSGLAMKRKDFEVRNRRGLKLVCSQWRPAFAEDTSQLPCVVYLHGNSSARVDVIKTRSLTVLSAALCTVVSFDFSGSGMSEGDWVTLGYFEQHDVADVLAYLRSNNMASRYLLWGRSMGAASALLYAACYPSSNLCGLILDSPFSSFRRLARDLVTGGQV 612
R+R + GA R Y+ +VMAIVRPPRC Y + D+GP + + GL + R+DF V NRRG+ L CSQWRP+F + T LPCVVYLHGNSSARVDV++TR+LT L++ ++V+FDFSGSG+S GD+VTLG EQHDVADVLAYLRS MASR+ +WGRSMGAASALLY + Y S ++ GL+LDSPF+SFR L +DLV GQV
Sbjct: 187 RKRAQKQGAIKQLRTGYNALVMAIVRPPRCCYAERDLGPWALSVGGGLVLHRRDFPVVNRRGVALACSQWRPSFVDATGALPCVVYLHGNSSARVDVVRTRALTALASMGASIVAFDFSGSGLSGGDFVTLGGNEQHDVADVLAYLRSECMASRFTIWGRSMGAASALLYTSKYGSEHVAGLVLDSPFASFRALCQDLVAMGQV 390
BLAST of mRNA_H-elongata_contig72757.14950.1 vs. uniprot
Match: A0A7S2SU53_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SU53_9STRA) HSP 1 Score: 171 bits (432), Expect = 1.200e-47 Identity = 88/194 (45.36%), Postives = 129/194 (66.49%), Query Frame = 1
Query: 28 DLARRGWYDKIVMAIVRPPRCKYTQEDMGPTVVPLHSGLAMKRKDFEVRNRRGLKLVCSQWRPAFAEDTSQLPCVVYLHGNSSARVDVIKTRSLTVLSAALCTVVSFDFSGSGMSEGDWVTLGYFEQHDVADVLAYLRSNNMASRYLLWGRSMGAASALLYAACYPSSNLCGLILDSPFSSFRRLARDLVTGGQ 609
++A+ G Y ++V AI+RPPR +Y E +GPT G R DFE+ N RG+K+ CS W P + + LPCV+Y+HGN+SAR + + +L + A T+V+FDF GSG+SEGDWV+LGYFE+ D+ V+ +LR+++ S LWGRSMGAA+ALL+ PS + ++LDSPF+ +LA ++V G+
Sbjct: 53 EMAKVG-YQELVNAIIRPPRAEYLPEQLGPTEFTF-GGHQFTRTDFELTNERGMKIQCSHWEPVERKAVT-LPCVIYMHGNASARPEALSQLALCLSLGA--TMVAFDFCGSGLSEGDWVSLGYFEREDLKVVVEHLRASDSVSTIALWGRSMGAATALLHGDRDPS--IAAMVLDSPFADLNQLAEEMVDKGR 239
BLAST of mRNA_H-elongata_contig72757.14950.1 vs. uniprot
Match: D3B5X8_POLPP (Alpha/beta hydrolase fold-1 domain-containing protein n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3B5X8_POLPP) HSP 1 Score: 169 bits (429), Expect = 7.980e-47 Identity = 85/185 (45.95%), Postives = 127/185 (68.65%), Query Frame = 1
Query: 49 YDKIVMAIVRPPRCKYTQEDMGPTVVPLHSGLAMKRKDFEVRNRRGLKLVCSQWRPA-FAEDTSQLPCVVYLHGNSSARVDVIK-TRSLTVLSAALCTVVSFDFSGSGMSEGDWVTLGYFEQHDVADVLAYLRSNNMASRYLLWGRSMGAASALLYAACYPSSNLCGLILDSPFSSFRRLARDLV 597
YD + ++RPPRC+YT EDMGP + +GL+ R DFE+ N RGL + CS ++PA + + QLPCV+Y HGNS R+D ++ R+L ++ TVV+FDF+GSG+S G++V+LGY+E+ D+ ++ +LR S LWGRSMGA +++LYA PS + G++LDSPFS+ ++A +LV
Sbjct: 15 YDSLCNMVIRPPRCQYTLEDMGPKAFSI-AGLSFVRNDFELVNGRGLPIQCSHFKPAEYWSNGKQLPCVIYCHGNSGCRLDALECVRTLLPINI---TVVAFDFAGSGLSGGEYVSLGYYEKEDIGTIVKHLRETGKISTIGLWGRSMGAVTSILYAKEDPS--VAGMVLDSPFSNLSKVAEELV 193
BLAST of mRNA_H-elongata_contig72757.14950.1 vs. uniprot
Match: A0A812SET8_9DINO (YqkD protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812SET8_9DINO) HSP 1 Score: 164 bits (416), Expect = 1.700e-46 Identity = 90/202 (44.55%), Postives = 131/202 (64.85%), Query Frame = 1
Query: 10 RRSSGADLARRGWYDKIVMAIVRPPRCKYTQEDMGPTVVPLHSGLAMKRKDFEVRNRRGLKLVCSQWRPAFAE--DTSQLPCVVYLHGNSSARVDVIKTRSLTVLSAALCTVVSFDFSGSGMSEGDWVTLGYFEQHDVADVLAYLRSNNMASRYLLWGRSMGAASALLYAACYPSSNLCGLILDSPFSSFRRLARDLVTGGQ 609
R+S + + G Y+ IV AI+RPPR Y ++GP+ L+ G KR D ++ N +GL L CS WRP+ E S LPCVV LHGNSS R++ ++ + VL+ + ++ +FDF+G G+SEGD++TLGY E+ DV+ V++YLR + S LWGRSMGAA+ALL+ PS + GL+LDSPF+S + R+L+ +
Sbjct: 22 RKSKRSCVPFSGTYESIVEAIIRPPRAPYEASNLGPSKFLLY-GHVFKRFDLQITNPQGLTLECSWWRPSNRELISESPLPCVVCLHGNSSCRLEALQHVRM-VLTRGI-SLFAFDFAGCGLSEGDYITLGYHEREDVSTVISYLRDSGEVSTIALWGRSMGAATALLHGHRDPS--IAGLVLDSPFASLEMVVRELIASAK 218
BLAST of mRNA_H-elongata_contig72757.14950.1 vs. uniprot
Match: A0A6U9KS33_9DINO (Hypothetical protein n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A6U9KS33_9DINO) HSP 1 Score: 167 bits (424), Expect = 2.340e-46 Identity = 91/215 (42.33%), Postives = 133/215 (61.86%), Query Frame = 1
Query: 4 RRRRSSGADLARRG-----------WYDKIVMAIVRPPRCKYTQEDMGPTVVPLHSGLAMKRKDFEVRNRRGLKLVCSQWRPAFAEDTSQ-LPCVVYLHGNSSARVDVIKTRSLTVLSAALCTVVSFDFSGSGMSEGDWVTLGYFEQHDVADVLAYLRSNNMASRYLLWGRSMGAASALLYAACYPSSNLCGLILDSPFSSFRRLARDLVTGGQV 612
RR RSSG + G Y ++V AI+RPPR +Y + D+GP + +G +R D +VRN +GL L CS W P + +Q LPCVVY+HGNSS R++ ++ L + + C + +FDF+G G+SEGD +TLGY E+ D +V+ +LR++ S LWGRSMGAA+ALL+ PS + ++LDSPFSS RLA++++ Q+
Sbjct: 26 RRARSSGREAKPAGKRPGFFKQLAQGYGELVNAIIRPPRAEYQEADLGPATFTV-AGRHYQRTDVKVRNAKGLLLECSWWEPVDGQRIAQELPCVVYMHGNSSCRLEALELLPLVLQTG--CMLFAFDFAGCGLSEGDHITLGYKEKDDAREVIDFLRASGKVSTVALWGRSMGAATALLHGHRDPS--IAAMVLDSPFSSLERLAKEVIDQAQI 235
BLAST of mRNA_H-elongata_contig72757.14950.1 vs. uniprot
Match: A0A6G0XDH8_9STRA (Hydrolase_4 domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XDH8_9STRA) HSP 1 Score: 166 bits (421), Expect = 4.920e-46 Identity = 83/188 (44.15%), Postives = 126/188 (67.02%), Query Frame = 1
Query: 49 YDKIVMAIVRPPRCKYTQEDMGPTVVPLHSGLAMKRKDFEVRNRRGLKLVCSQWRPAFAEDTSQLPCVVYLHGNSSARVDVIKTRSLTVLSAALCTVVSFDFSGSGMSEGDWVTLGYFEQHDVADVLAYLRSNNMASRYLLWGRSMGAASALLYAACYPSSNLCGLILDSPFSSFRRLARDLVTGGQV 612
Y +V ++RPPR +YT +D+GPT L + R+DF +RN +GL + CS W+P S++PC+V LHGNSS+R+ ++T L AA +V + DFSGSG+SEG +V+LGY E++D+ VL +L ++N S +LWGRSMGA +++L AA ++ ++LDSPF+S +R+A DLV G++
Sbjct: 35 YQGLVHTVIRPPRSRYTLDDLGPTTCIFAHNLIVTRQDFTLRNTKGLAVECSWWKPK-GNSGSKMPCIVVLHGNSSSRLGCMET--LVQGLAAGFSVCAIDFSGSGLSEGKYVSLGYHEKNDIHLVLQHLVASNQVSNIILWGRSMGAVASILCAAEEDREHIAAMVLDSPFASLKRVAMDLVDDGKL 219
BLAST of mRNA_H-elongata_contig72757.14950.1 vs. uniprot
Match: A0A7S2SL50_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2SL50_9STRA) HSP 1 Score: 168 bits (426), Expect = 8.230e-46 Identity = 88/191 (46.07%), Postives = 131/191 (68.59%), Query Frame = 1
Query: 40 RGWYDKIVMAIVRPPRCKYTQEDMGPTVVPLHSGLAMKRKDFEVRNRRGLKLVCSQWRPAFAEDTSQLPCVVYLHGNSSARVDVIKTRSLTVLSAALCTVVSFDFSGSGMSEGDWVTLGYFEQHDVADVLAYLRSNNMASRYLLWGRSMGAASALLYAACYPSSNLCGLILDSPFSSFRRLARDLVTGGQV 612
RG Y+ +V AI+RPPR +Y +GP V + G R+D E+ N+RGLKL CS W+P + T PC+VYLHGN+S R + ++ L +LS+ L T+ + DF+GSGMSEG++++LG+FE+ DV V+ +LR+++M S LWGRSMGA +AL++ P+ + +ILDSPF+S R+LA++LV Q+
Sbjct: 55 RGGYNDLVNAIIRPPRAEYDMGVLGPEVFTV-DGRVFTRQDIELVNKRGLKLACSHWKPK--DQTGAKPCMVYLHGNASCRAEALECLPL-ILSSGL-TLFALDFAGSGMSEGEYISLGWFEREDVQVVVEHLRNSDMVSTIGLWGRSMGAVTALMFGDSDPT--IACMILDSPFASLRQLAKELVDHAQL 238
BLAST of mRNA_H-elongata_contig72757.14950.1 vs. uniprot
Match: UPI000644F39B (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644F39B) HSP 1 Score: 163 bits (412), Expect = 6.840e-45 Identity = 82/185 (44.32%), Postives = 126/185 (68.11%), Query Frame = 1
Query: 49 YDKIVMAIVRPPRCKYTQEDMGPTVVPLHSGLAMKRKDFEVRNRRGLKLVCSQWRPA-FAEDTSQLPCVVYLHGNSSARVDVIK-TRSLTVLSAALCTVVSFDFSGSGMSEGDWVTLGYFEQHDVADVLAYLRSNNMASRYLLWGRSMGAASALLYAACYPSSNLCGLILDSPFSSFRRLARDLV 597
YD + ++RPPRC+YT+ DMGP + GL+ R DFE+ N RGL + CS ++PA + + QLPCV+Y HGNS R+D ++ R+L ++ TV++ DF+GSG+S+G++V+LGY+E+ D++ V+ +LR S LWGRSMGA +++LYA PS + G++LDSPF + ++A +LV
Sbjct: 9 YDTLCNMVIRPPRCQYTENDMGPKSFRI-GGLSFVRNDFELINVRGLSIKCSHFKPAEYWTNGKQLPCVIYCHGNSGCRLDSLECVRTLLPINI---TVMALDFTGSGLSDGEYVSLGYYEKEDISTVVKHLRETGKISTIGLWGRSMGAVTSILYAKEDPS--IAGMVLDSPFCNLYKVAEELV 187 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig72757.14950.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig72757.14950.1 >prot_H-elongata_contig72757.14950.1 ID=prot_H-elongata_contig72757.14950.1|Name=mRNA_H-elongata_contig72757.14950.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=204bp RRRRRSSGADLARRGWYDKIVMAIVRPPRCKYTQEDMGPTVVPLHSGLAMback to top mRNA from alignment at H-elongata_contig72757:745..2394- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig72757.14950.1 ID=mRNA_H-elongata_contig72757.14950.1|Name=mRNA_H-elongata_contig72757.14950.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1650bp|location=Sequence derived from alignment at H-elongata_contig72757:745..2394- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig72757:745..2394- >mRNA_H-elongata_contig72757.14950.1 ID=mRNA_H-elongata_contig72757.14950.1|Name=mRNA_H-elongata_contig72757.14950.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1224bp|location=Sequence derived from alignment at H-elongata_contig72757:745..2394- (Himanthalia elongata Himel1 dioecious)back to top |