mRNA_H-elongata_contig72664.14937.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig72664.14937.1
Unique NamemRNA_H-elongata_contig72664.14937.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig72664.14937.1 vs. uniprot
Match: D8LRS6_ECTSI (Heme O synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRS6_ECTSI)

HSP 1 Score: 345 bits (884), Expect = 3.850e-115
Identity = 185/252 (73.41%), Postives = 204/252 (80.95%), Query Frame = 1
Query:    1 MLRVVDGYLHRPLTRSGFRQALRVGSTGVHRLFKTDGRSNHGDR-TFVANAQHHLRLYSQLSKHRLSALVMVTTSAGYLAAGGPVDAVTLSCACLGTMLASSSANTFNQVLETSNDSRMKRTRNRPLPSGRISRSHALGWGVASGVTGISILAAGTNPLTAALGAANLFLYVGPYTLSKTRSELNTWVGSVVGAVPPLMGWTAATGAATAVEPLLLALYLFIWQFPHFFSLAWLHREDYARGGFAMVRFREP 753
            +LR V G L +PL  +     +R+G       F TD R     R T VA A H ++LYSQLSKHRLSALVM TTSAGYLAAGGPVDA+ L+ AC+GTMLASSSANTFNQV+ET+ND+RM RTR RPLPSGRISR HALGWGVASG  GI++LAAG+NPLTA LGAANL LYVGPYTLSKTRSE+NTWVGSVVGAVPPLMGW AATG   AVEPLLLA YLF+WQFPHFFSLAWLHREDYARGGFAMV   +P
Sbjct:    2 LLRGVHGRLCKPLAHARALGVVRLGPNLEACAFGTDTRQQEPKRRTVVAEAGHLMKLYSQLSKHRLSALVMSTTSAGYLAAGGPVDALALTSACVGTMLASSSANTFNQVIETANDARMHRTRARPLPSGRISRQHALGWGVASGTAGITVLAAGSNPLTATLGAANLLLYVGPYTLSKTRSEINTWVGSVVGAVPPLMGWAAATGELVAVEPLLLATYLFMWQFPHFFSLAWLHREDYARGGFAMVPCADP 253          
BLAST of mRNA_H-elongata_contig72664.14937.1 vs. uniprot
Match: A0A7S3XHY7_HETAK (Heme O synthase (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XHY7_HETAK)

HSP 1 Score: 254 bits (649), Expect = 2.360e-80
Identity = 132/196 (67.35%), Postives = 164/196 (83.67%), Query Frame = 1
Query:  172 SQLSKHRLSALVMVTTSAGYLAAGGPVDAVTLSCACLGTMLASSSANTFNQVLETSNDSRMKRTRNRPLPSGRISRSHALGWGVAS-GVTGISILAAGTNPLTAALGAANLFLYVGPYTLSKTRSELNTWVGSVVGAVPPLMGWTAATGAATA-VEPLLLALYLFIWQFPHFFSLAWLHREDYARGGFAMVRFREP 753
            ++LSK RLSALV+ TTSAGYLAAGGPVD VT S AC+GT LA++SA+TFNQV+E  NDS MKRT NRPLPSGRIS+S+A+ WG+++ GV+G +ILAAGT+P+T ALG +N+FLY  PYTLSKTR+E NTW+GSVVGA+PP+MGWTAATG   A  +P LL   LF WQFPHF +L+W++R+DYARGGFAM+   +P
Sbjct:   64 AELSKARLSALVVFTTSAGYLAAGGPVDPVTFSAACVGTSLAAASASTFNQVIEIKNDSMMKRTCNRPLPSGRISKSNAIKWGLSTAGVSG-AILAAGTDPVTTALGLSNIFLYSVPYTLSKTRTEANTWIGSVVGAIPPMMGWTAATGGDLASADPWLLGALLFYWQFPHFLALSWMYRKDYARGGFAMIPCADP 258          
BLAST of mRNA_H-elongata_contig72664.14937.1 vs. uniprot
Match: W7U0I5_9STRA (Heme O synthase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U0I5_9STRA)

HSP 1 Score: 235 bits (600), Expect = 5.370e-72
Identity = 124/197 (62.94%), Postives = 148/197 (75.13%), Query Frame = 1
Query:  166 LYSQLSKHRLSALVMVTTSAGYLAAGGPVDAVTLSCACLGTMLASSSANTFNQVLETSNDSRMKRTRNRPLPSGRISRSHALGWGVASGVTGISILAAGTNPLTAALGAANLFLYVGPYTLSKTRSELNTWVGSVVGAVPPLMGWTAATGAATAV------EPLLLALYLFIWQFPHFFSLAWLHREDYARGGFAMV 738
            L ++L K RLSALV++TTS+G+LAAGGPV  +  +   +GTMLA+ SANTFNQ+LET ND RMKRT  RPLPSGR SR  AL W V S     ++L AGTNPLT ALG  NL LY  PYTLSKTRSE NTW+G++VGAVPPLMGW AAT  A+        + +LLA  LF+WQFPHFF+L+W+HR+DYARGGF MV
Sbjct:   45 LCAELGKARLSALVVLTTSSGFLAAGGPVAWLPFTAVSVGTMLAACSANTFNQLLETDNDKRMKRTHLRPLPSGRASRPFALAWAVGSAGASAAVLTAGTNPLTTALGMGNLALYALPYTLSKTRSEANTWIGALVGAVPPLMGWAAATDCASLTSLLSSPDAVLLASILFLWQFPHFFALSWVHRKDYARGGFQMV 241          
BLAST of mRNA_H-elongata_contig72664.14937.1 vs. uniprot
Match: H3GG45_PHYRM (Protoheme IX farnesyltransferase, mitochondrial n=19 Tax=Phytophthora TaxID=4783 RepID=H3GG45_PHYRM)

HSP 1 Score: 221 bits (564), Expect = 2.160e-66
Identity = 117/209 (55.98%), Postives = 146/209 (69.86%), Query Frame = 1
Query:  127 DRTFVANAQHHLRLYSQLSKHRLSALVMVTTSAGYLAAGGPVDAVTLSCACLGTMLASSSANTFNQVLETSNDSRMKRTRNRPLPSGRISRSHALGWGVASGVTGISILAAGTNPLTAALGAANLFLYVGPYTLSKTRSELNTWVGSVVGAVPPLMGWTAATGAATAVEPLLLALYLFIWQFPHFFSLAWLHREDYARGGFAMVRFREP 753
            D T     +  L +YSQLSK RLSALV++TT AG+L AGGP+   T + A +GT LA++SANTFNQ  E   D++M+RT  RPLPSGRI+R HAL +G A+     +ILAAG +PL A+LGA N+ LY   YT  K +SELNTWVGSVVGA+PPLMGW AATG   A E  L A  ++ WQ PHFF+L+W  R+DY RGG+ MV   +P
Sbjct:   61 DVTTTMTLKERLEIYSQLSKARLSALVVMTTGAGFLMAGGPISWGTFAAATVGTSLAAASANTFNQCWEVELDAKMQRTHRRPLPSGRITRPHALAFGAATATASTAILAAGCSPLVASLGAVNIGLYALVYTPMKMKSELNTWVGSVVGAIPPLMGWAAATGTILAPEAALHAYLMYCWQMPHFFALSWRSRKDYGRGGYKMVACNDP 269          
BLAST of mRNA_H-elongata_contig72664.14937.1 vs. uniprot
Match: K3WYN9_GLOUD (Protoheme IX farnesyltransferase, mitochondrial n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WYN9_GLOUD)

HSP 1 Score: 221 bits (563), Expect = 3.360e-66
Identity = 116/198 (58.59%), Postives = 143/198 (72.22%), Query Frame = 1
Query:  160 LRLYSQLSKHRLSALVMVTTSAGYLAAGGPVDAVTLSCACLGTMLASSSANTFNQVLETSNDSRMKRTRNRPLPSGRISRSHALGWGVASGVTGISILAAGTNPLTAALGAANLFLYVGPYTLSKTRSELNTWVGSVVGAVPPLMGWTAATGAATAVEPLLLALYLFIWQFPHFFSLAWLHREDYARGGFAMVRFREP 753
            L +Y QLSK RLS+LV++TT AG+L AGGP+   T + A +GT LA++SANTFNQ  E   D++M RT  RPLPSGRI+R+HA+G+GVA+  T  +ILAAG +PL A+LG  N+ LY   YT  KTRSE NTWVGSVVGA+PP+MGW AATG     E  L A  LF WQ PHFF+L+W  R DYARGG+ MV   +P
Sbjct:   73 LEIYGQLSKVRLSSLVVMTTGAGFLMAGGPISWGTFAAATIGTSLAAASANTFNQAWEVELDAKMNRTCKRPLPSGRITRNHAIGFGVATAATSTAILAAGCSPLVASLGLFNIGLYSLVYTPMKTRSEFNTWVGSVVGAIPPVMGWAAATGTVMTPEAALHAYLLFCWQMPHFFALSWRSRNDYARGGYKMVACADP 270          
BLAST of mRNA_H-elongata_contig72664.14937.1 vs. uniprot
Match: A0A7R9YX60_9STRA (Heme O synthase n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9YX60_9STRA)

HSP 1 Score: 221 bits (564), Expect = 3.610e-66
Identity = 119/208 (57.21%), Postives = 147/208 (70.67%), Query Frame = 1
Query:  133 TFVANAQHHLRLYSQLSKHRLSALVMVTTSAGYLAAGGPVDAVTLSCACLGTMLASSSANTFNQVLETSNDSRMKRTRNRPLPSGRISRSHALGWGVASGVTGISILAAGTNPLTAALGAANLFLYVGPYTLSKTRSELNTWVGSVVGAVPPLMGWTAATGAATA-VEPLLLALYLFIWQFPHFFSLAWLHREDYARGGFAMVRFREP 753
            T  + A    +   +LSK +LSALV+ T++AG+LAAGGP+   TL+   +GT L SSSA+TFNQ+ E   D RMKRTRNRPL  G +S   A     ASGV G  IL AGT+P+TAALG AN+ LY G YT  KT+SE+NTWVG+VVGAVPP+MGWTAATG +   +E   L   LF+WQFPHFF+L+W+HR DYARGGF MV   +P
Sbjct:  102 TTTSTASDFAKAVPELSKAKLSALVVSTSTAGFLAAGGPISYPTLAACAVGTALCSSSASTFNQIFEVERDRRMKRTRNRPLVKGVVSPGSAAALATASGVGGGVILLAGTDPVTAALGVANIGLYAGAYTALKTKSEINTWVGAVVGAVPPVMGWTAATGGSLLDLEAAFLGGTLFLWQFPHFFALSWMHRVDYARGGFQMVPVNDP 309          
BLAST of mRNA_H-elongata_contig72664.14937.1 vs. uniprot
Match: A0A8K1CPL5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CPL5_PYTOL)

HSP 1 Score: 221 bits (562), Expect = 3.990e-66
Identity = 117/193 (60.62%), Postives = 141/193 (73.06%), Query Frame = 1
Query:  160 LRLYSQLSKHRLSALVMVTTSAGYLAAGGPVDAVTLSCACLGTMLASSSANTFNQVLETSNDSRMKRTRNRPLPSGRISRSHALGWGVASGVTGISILAAGTNPLTAALGAANLFLYVGPYTLSKTRSELNTWVGSVVGAVPPLMGWTAATGAATAVEPLLLALYLFIWQFPHFFSLAWLHREDYARGGFAMV 738
            L +Y +LSK RLSALV++TT AG+L AGGP+   + + A +GT LA++SANTFNQ  E   D++M+RT  RPLPSGRISRSHAL +G  +      ILAAG NPL A+LG  N+ LY   YT  KTRSELNTWVGSVVGA+PP+MGW AATG+A A E  L A  LF WQ PHFF+L+W  R DYARGG+ MV
Sbjct:   68 LGIYKELSKARLSALVVMTTGAGFLMAGGPISWGSFAAATVGTSLAAASANTFNQAWEIELDAKMQRTHKRPLPSGRISRSHALAFGATTAAVSTGILAAGCNPLVASLGLFNIGLYSLVYTPMKTRSELNTWVGSVVGAIPPIMGWAAATGSALAPEAALHAYLLFCWQMPHFFALSWRSRNDYARGGYQMV 260          
BLAST of mRNA_H-elongata_contig72664.14937.1 vs. uniprot
Match: A0A662XZN3_9STRA (Protoheme IX farnesyltransferase, mitochondrial n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XZN3_9STRA)

HSP 1 Score: 220 bits (561), Expect = 7.370e-66
Identity = 116/198 (58.59%), Postives = 144/198 (72.73%), Query Frame = 1
Query:  160 LRLYSQLSKHRLSALVMVTTSAGYLAAGGPVDAVTLSCACLGTMLASSSANTFNQVLETSNDSRMKRTRNRPLPSGRISRSHALGWGVASGVTGISILAAGTNPLTAALGAANLFLYVGPYTLSKTRSELNTWVGSVVGAVPPLMGWTAATGAATAVEPLLLALYLFIWQFPHFFSLAWLHREDYARGGFAMVRFREP 753
            + +YSQLSK RLSALV++TT AG+L AGGP+   T + A +GT LA++SANTFNQ  E   D++M+RT  RPLPSGRI+R HAL +G A+     +ILAAG +PL A+LGA N+ LY   YT  K RSELNTWVGS+VGA+PPLMGW AATG   A E  L A  +F WQ PHFF+L+W  R+DYARGG+ MV   +P
Sbjct:   79 MEIYSQLSKARLSALVVMTTGAGFLMAGGPISWGTFAAATVGTSLAAASANTFNQCWEVELDAKMQRTHRRPLPSGRITRQHALTFGAATAAASTAILAAGCSPLVASLGAFNIGLYSLVYTPMKMRSELNTWVGSLVGAIPPLMGWAAATGTLLAPEAALHAYLMFCWQMPHFFALSWRSRKDYARGGYKMVACNDP 276          
BLAST of mRNA_H-elongata_contig72664.14937.1 vs. uniprot
Match: A0A7R9UA84_9STRA (Heme O synthase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UA84_9STRA)

HSP 1 Score: 218 bits (556), Expect = 8.240e-66
Identity = 113/198 (57.07%), Postives = 145/198 (73.23%), Query Frame = 1
Query:  160 LRLYSQLSKHRLSALVMVTTSAGYLAAGGPVDAVTLSCACLGTMLASSSANTFNQVLETSNDSRMKRTRNRPLPSGRISRSHALGWGVASGVTGISILAAGTNPLTAALGAANLFLYVGPYTLSKTRSELNTWVGSVVGAVPPLMGWTAATGAATAVEPLLLALYLFIWQFPHFFSLAWLHREDYARGGFAMVRFREP 753
            L++YS+LSK RLSALV+ TT+AG+L+AG PV   T++ AC GT LA+ +A+ FNQ++E   D+RM RTR RPLPSGR SR  A      + +  ++IL  G NP TAALGA N+FLY   YT SK  +E NTW+G++VGA+PP+MG+ AATG   + E L LA  LF+WQFPHFFSLAW+HR+DYARGGF MV   +P
Sbjct:   62 LQVYSELSKARLSALVVSTTAAGFLSAGAPVCLSTMALACAGTSLAAGAASCFNQIVERDRDARMVRTRLRPLPSGRASRDEAFALASTASLASVAILYIGVNPATAALGAGNIFLYSVAYTQSKPVTEWNTWIGALVGAIPPVMGYCAATGDVLSGESLFLATSLFLWQFPHFFSLAWIHRKDYARGGFQMVPVNDP 259          
BLAST of mRNA_H-elongata_contig72664.14937.1 vs. uniprot
Match: A0A0M0JP87_9EUKA (Heme O synthase n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JP87_9EUKA)

HSP 1 Score: 218 bits (555), Expect = 9.910e-66
Identity = 110/193 (56.99%), Postives = 142/193 (73.58%), Query Frame = 1
Query:  175 QLSKHRLSALVMVTTSAGYLAAGGPVDAVTLSCACLGTMLASSSANTFNQVLETSNDSRMKRTRNRPLPSGRISRSHALGWGVASGVTGISILAAGTNPLTAALGAANLFLYVGPYTLSKTRSELNTWVGSVVGAVPPLMGWTAATGAATAVEPLLLALYLFIWQFPHFFSLAWLHREDYARGGFAMVRFREP 753
            +LSK RLSALV+ +T+AG+L + GP+D  +L+ A  GT L + SAN+FNQ++ET ND+ M RT  RPLPSGRISR HA+GW  ASG  G++ LA GTN +T ALGAA L LY   YT  K R+ LNTWVG+VVGA+PP+MGWTAA G    +E  +L   LF+WQ PHFF+L+W++R DYA+GG+ MV   +P
Sbjct:    2 ELSKSRLSALVVGSTAAGHLMSSGPLDLTSLASALGGTFLLAGSANSFNQIIETRNDAAMNRTHKRPLPSGRISRPHAIGWASASGAAGLATLALGTNCMTTALGAATLGLYTLAYTPMKQRTPLNTWVGAVVGAIPPVMGWTAAGGGLLTLEAAVLGSSLFLWQMPHFFALSWMYRSDYAQGGYQMVPLHDP 194          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig72664.14937.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRS6_ECTSI3.850e-11573.41Heme O synthase n=2 Tax=Ectocarpus TaxID=2879 RepI... [more]
A0A7S3XHY7_HETAK2.360e-8067.35Heme O synthase (Fragment) n=1 Tax=Heterosigma aka... [more]
W7U0I5_9STRA5.370e-7262.94Heme O synthase n=2 Tax=Monodopsidaceae TaxID=4250... [more]
H3GG45_PHYRM2.160e-6655.98Protoheme IX farnesyltransferase, mitochondrial n=... [more]
K3WYN9_GLOUD3.360e-6658.59Protoheme IX farnesyltransferase, mitochondrial n=... [more]
A0A7R9YX60_9STRA3.610e-6657.21Heme O synthase n=1 Tax=Pseudictyota dubia TaxID=2... [more]
A0A8K1CPL5_PYTOL3.990e-6660.62Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A662XZN3_9STRA7.370e-6658.59Protoheme IX farnesyltransferase, mitochondrial n=... [more]
A0A7R9UA84_9STRA8.240e-6657.07Heme O synthase n=1 Tax=Pinguiococcus pyrenoidosus... [more]
A0A0M0JP87_9EUKA9.910e-6656.99Heme O synthase n=1 Tax=Chrysochromulina tobinii T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig72664contigH-elongata_contig72664:166..918 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score350.5
Seed ortholog evalue6.4e-94
Seed eggNOG ortholog2880.D8LRS6
Preferred nameCOX10
KEGG rclassRC01786
KEGG koko:K02257,ko:K09008,ko:K22072
KEGG ReactionR07411
KEGG Pathwayko00190,ko00860,ko01100,ko01110,ko04714,map00190,map00860,map01100,map01110,map04714
KEGG ModuleM00154
GOsGO:0000266,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0004311,GO:0004518,GO:0004519,GO:0004659,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005829,GO:0006091,GO:0006119,GO:0006123,GO:0006139,GO:0006163,GO:0006464,GO:0006725,GO:0006753,GO:0006778,GO:0006779,GO:0006783,GO:0006784,GO:0006793,GO:0006796,GO:0006807,GO:0006996,GO:0007005,GO:0008150,GO:0008152,GO:0008495,GO:0008535,GO:0009058,GO:0009060,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009451,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016043,GO:0016070,GO:0016310,GO:0016740,GO:0016765,GO:0016787,GO:0016788,GO:0017004,GO:0017144,GO:0018130,GO:0018342,GO:0018343,GO:0019438,GO:0019538,GO:0019637,GO:0019646,GO:0019693,GO:0019866,GO:0022607,GO:0022900,GO:0022904,GO:0031090,GO:0031224,GO:0031966,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0032991,GO:0033013,GO:0033014,GO:0034622,GO:0034641,GO:0036211,GO:0042168,GO:0042440,GO:0042773,GO:0042775,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045333,GO:0046034,GO:0046148,GO:0046160,GO:0046483,GO:0048285,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0065003,GO:0070013,GO:0070069,GO:0071704,GO:0071840,GO:0072521,GO:0090304,GO:0090305,GO:0097159,GO:0097354,GO:1901135,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576
EggNOG free text desc.heme o metabolic process
EggNOG OGsCOG0109@1,KOG1380@2759
EC2.5.1.141
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01006,ko03029
Hectar predicted targeting categorymitochondrion
Ec32 ortholog descriptionCOX10 homolog, cytochrome c oxidase assembly protein
Ec32 orthologEc-08_002270.1
Exons1
Model size753
Cds size753
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931128.5102246-CDS-H-elongata_contig72664:165..9181622931128.5102246-CDS-H-elongata_contig72664:165..918Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig72664 166..918 -
1691679709.6292014-CDS-H-elongata_contig72664:165..9181691679709.6292014-CDS-H-elongata_contig72664:165..918Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig72664 166..918 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig72664.14937.1prot_H-elongata_contig72664.14937.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig72664 166..918 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig72664.14937.1

>prot_H-elongata_contig72664.14937.1 ID=prot_H-elongata_contig72664.14937.1|Name=mRNA_H-elongata_contig72664.14937.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=251bp
MLRVVDGYLHRPLTRSGFRQALRVGSTGVHRLFKTDGRSNHGDRTFVANA
QHHLRLYSQLSKHRLSALVMVTTSAGYLAAGGPVDAVTLSCACLGTMLAS
SSANTFNQVLETSNDSRMKRTRNRPLPSGRISRSHALGWGVASGVTGISI
LAAGTNPLTAALGAANLFLYVGPYTLSKTRSELNTWVGSVVGAVPPLMGW
TAATGAATAVEPLLLALYLFIWQFPHFFSLAWLHREDYARGGFAMVRFRE
P
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mRNA from alignment at H-elongata_contig72664:166..918-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig72664.14937.1 ID=mRNA_H-elongata_contig72664.14937.1|Name=mRNA_H-elongata_contig72664.14937.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=753bp|location=Sequence derived from alignment at H-elongata_contig72664:166..918- (Himanthalia elongata Himel1 dioecious)
ATGCTGCGTGTCGTTGACGGGTATTTACACCGCCCGCTAACTCGATCAGG ATTCCGTCAGGCACTGCGAGTGGGATCGACGGGTGTACATCGACTCTTTA AAACTGATGGTAGGAGCAATCATGGAGACCGCACCTTCGTGGCAAATGCT CAGCATCACTTACGCCTATACTCGCAGCTATCAAAGCATCGCCTTAGTGC ACTTGTAATGGTGACGACTTCCGCTGGATATCTGGCAGCAGGAGGTCCGG TGGATGCTGTAACTCTATCGTGTGCTTGCTTGGGAACGATGCTCGCATCG AGTTCCGCGAACACGTTTAATCAAGTGCTGGAGACTTCAAATGACTCACG AATGAAGCGTACGCGAAACCGCCCACTCCCGTCCGGGAGGATTTCGCGTT CCCACGCGCTTGGATGGGGCGTGGCATCGGGTGTGACCGGCATCTCGATC CTGGCAGCTGGTACGAACCCGCTGACTGCAGCCTTGGGAGCCGCCAACCT TTTTCTTTACGTAGGGCCATACACCCTTTCCAAAACTCGGTCGGAACTCA ACACTTGGGTGGGTTCAGTTGTCGGAGCGGTGCCTCCATTGATGGGATGG ACAGCTGCTACAGGCGCAGCTACAGCTGTGGAACCGCTATTATTGGCCTT ATACCTCTTTATTTGGCAGTTTCCCCACTTCTTCTCCCTAGCATGGCTAC ACCGGGAGGACTACGCACGAGGGGGATTTGCGATGGTGCGTTTTCGGGAG CCC
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Coding sequence (CDS) from alignment at H-elongata_contig72664:166..918-

>mRNA_H-elongata_contig72664.14937.1 ID=mRNA_H-elongata_contig72664.14937.1|Name=mRNA_H-elongata_contig72664.14937.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1506bp|location=Sequence derived from alignment at H-elongata_contig72664:166..918- (Himanthalia elongata Himel1 dioecious)
ATGCTGCGTGTCGTTGACGGGTATTTACACCGCCCGCTAACTCGATCAGG
ATTCCGTCAGGCACTGCGAGTGGGATCGACGGGTGTACATCGACTCTTTA
AAACTGATGGTAGGAGCAATCATGGAGACCGCACCTTCGTGGCAAATGCT
CAGCATCACTTACGCCTATACTCGCAGCTATCAAAGCATCGCCTTAGTGC
ACTTGTAATGGTGACGACTTCCGCTGGATATCTGGCAGCAGGAGGTCCGG
TGGATGCTGTAACTCTATCGTGTGCTTGCTTGGGAACGATGCTCGCATCG
AGTTCCGCGAACACGTTTAATCAAGTGCTGGAGACTTCAAATGACTCACG
AATGAAGCGTACGCGAAACCGCCCACTCCCGTCCGGGAGGATTTCGCGTT
CCCACGCGCTTGGATGGGGCGTGGCATCGGGTGTGACCGGCATCTCGATC
CTGGCAGCTGGTACGAACCCGCTGACTGCAGCCTTGGGAGCCGCCAACCT
TTTTCTTTACGTAGGGCCATACACCCTTTCCAAAACTCGGTCGGAACTCA
ACACTTGGGTGGGTTCAGTTGTCGGAGCGGTGCCTCCATTGATGGGATGG
ACAGCTGCTACAGGCGCAGCTACAGCTGTGGAACCGCTATTATTGGCCTT
ATACCTCTTTATTTGGCAGTTTCCCCACTTCTTCTCCCTAGCATGGCTAC
ACCGGGAGGACTACGCACGAGGGGGATTTGCGATGGTGCGTTTTCGGGAG
CCCATGCTGCGTGTCGTTGACGGGTATTTACACCGCCCGCTAACTCGATC
AGGATTCCGTCAGGCACTGCGAGTGGGATCGACGGGTGTACATCGACTCT
TTAAAACTGATGGTAGGAGCAATCATGGAGACCGCACCTTCGTGGCAAAT
GCTCAGCATCACTTACGCCTATACTCGCAGCTATCAAAGCATCGCCTTAG
TGCACTTGTAATGGTGACGACTTCCGCTGGATATCTGGCAGCAGGAGGTC
CGGTGGATGCTGTAACTCTATCGTGTGCTTGCTTGGGAACGATGCTCGCA
TCGAGTTCCGCGAACACGTTTAATCAAGTGCTGGAGACTTCAAATGACTC
ACGAATGAAGCGTACGCGAAACCGCCCACTCCCGTCCGGGAGGATTTCGC
GTTCCCACGCGCTTGGATGGGGCGTGGCATCGGGTGTGACCGGCATCTCG
ATCCTGGCAGCTGGTACGAACCCGCTGACTGCAGCCTTGGGAGCCGCCAA
CCTTTTTCTTTACGTAGGGCCATACACCCTTTCCAAAACTCGGTCGGAAC
TCAACACTTGGGTGGGTTCAGTTGTCGGAGCGGTGCCTCCATTGATGGGA
TGGACAGCTGCTACAGGCGCAGCTACAGCTGTGGAACCGCTATTATTGGC
CTTATACCTCTTTATTTGGCAGTTTCCCCACTTCTTCTCCCTAGCATGGC
TACACCGGGAGGACTACGCACGAGGGGGATTTGCGATGGTGCGTTTTCGG
GAGCCC
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