mRNA_H-elongata_contig72664.14937.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig72664.14937.1 vs. uniprot
Match: D8LRS6_ECTSI (Heme O synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRS6_ECTSI) HSP 1 Score: 345 bits (884), Expect = 3.850e-115 Identity = 185/252 (73.41%), Postives = 204/252 (80.95%), Query Frame = 1
Query: 1 MLRVVDGYLHRPLTRSGFRQALRVGSTGVHRLFKTDGRSNHGDR-TFVANAQHHLRLYSQLSKHRLSALVMVTTSAGYLAAGGPVDAVTLSCACLGTMLASSSANTFNQVLETSNDSRMKRTRNRPLPSGRISRSHALGWGVASGVTGISILAAGTNPLTAALGAANLFLYVGPYTLSKTRSELNTWVGSVVGAVPPLMGWTAATGAATAVEPLLLALYLFIWQFPHFFSLAWLHREDYARGGFAMVRFREP 753
+LR V G L +PL + +R+G F TD R R T VA A H ++LYSQLSKHRLSALVM TTSAGYLAAGGPVDA+ L+ AC+GTMLASSSANTFNQV+ET+ND+RM RTR RPLPSGRISR HALGWGVASG GI++LAAG+NPLTA LGAANL LYVGPYTLSKTRSE+NTWVGSVVGAVPPLMGW AATG AVEPLLLA YLF+WQFPHFFSLAWLHREDYARGGFAMV +P
Sbjct: 2 LLRGVHGRLCKPLAHARALGVVRLGPNLEACAFGTDTRQQEPKRRTVVAEAGHLMKLYSQLSKHRLSALVMSTTSAGYLAAGGPVDALALTSACVGTMLASSSANTFNQVIETANDARMHRTRARPLPSGRISRQHALGWGVASGTAGITVLAAGSNPLTATLGAANLLLYVGPYTLSKTRSEINTWVGSVVGAVPPLMGWAAATGELVAVEPLLLATYLFMWQFPHFFSLAWLHREDYARGGFAMVPCADP 253
BLAST of mRNA_H-elongata_contig72664.14937.1 vs. uniprot
Match: A0A7S3XHY7_HETAK (Heme O synthase (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XHY7_HETAK) HSP 1 Score: 254 bits (649), Expect = 2.360e-80 Identity = 132/196 (67.35%), Postives = 164/196 (83.67%), Query Frame = 1
Query: 172 SQLSKHRLSALVMVTTSAGYLAAGGPVDAVTLSCACLGTMLASSSANTFNQVLETSNDSRMKRTRNRPLPSGRISRSHALGWGVAS-GVTGISILAAGTNPLTAALGAANLFLYVGPYTLSKTRSELNTWVGSVVGAVPPLMGWTAATGAATA-VEPLLLALYLFIWQFPHFFSLAWLHREDYARGGFAMVRFREP 753
++LSK RLSALV+ TTSAGYLAAGGPVD VT S AC+GT LA++SA+TFNQV+E NDS MKRT NRPLPSGRIS+S+A+ WG+++ GV+G +ILAAGT+P+T ALG +N+FLY PYTLSKTR+E NTW+GSVVGA+PP+MGWTAATG A +P LL LF WQFPHF +L+W++R+DYARGGFAM+ +P
Sbjct: 64 AELSKARLSALVVFTTSAGYLAAGGPVDPVTFSAACVGTSLAAASASTFNQVIEIKNDSMMKRTCNRPLPSGRISKSNAIKWGLSTAGVSG-AILAAGTDPVTTALGLSNIFLYSVPYTLSKTRTEANTWIGSVVGAIPPMMGWTAATGGDLASADPWLLGALLFYWQFPHFLALSWMYRKDYARGGFAMIPCADP 258
BLAST of mRNA_H-elongata_contig72664.14937.1 vs. uniprot
Match: W7U0I5_9STRA (Heme O synthase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U0I5_9STRA) HSP 1 Score: 235 bits (600), Expect = 5.370e-72 Identity = 124/197 (62.94%), Postives = 148/197 (75.13%), Query Frame = 1
Query: 166 LYSQLSKHRLSALVMVTTSAGYLAAGGPVDAVTLSCACLGTMLASSSANTFNQVLETSNDSRMKRTRNRPLPSGRISRSHALGWGVASGVTGISILAAGTNPLTAALGAANLFLYVGPYTLSKTRSELNTWVGSVVGAVPPLMGWTAATGAATAV------EPLLLALYLFIWQFPHFFSLAWLHREDYARGGFAMV 738
L ++L K RLSALV++TTS+G+LAAGGPV + + +GTMLA+ SANTFNQ+LET ND RMKRT RPLPSGR SR AL W V S ++L AGTNPLT ALG NL LY PYTLSKTRSE NTW+G++VGAVPPLMGW AAT A+ + +LLA LF+WQFPHFF+L+W+HR+DYARGGF MV
Sbjct: 45 LCAELGKARLSALVVLTTSSGFLAAGGPVAWLPFTAVSVGTMLAACSANTFNQLLETDNDKRMKRTHLRPLPSGRASRPFALAWAVGSAGASAAVLTAGTNPLTTALGMGNLALYALPYTLSKTRSEANTWIGALVGAVPPLMGWAAATDCASLTSLLSSPDAVLLASILFLWQFPHFFALSWVHRKDYARGGFQMV 241
BLAST of mRNA_H-elongata_contig72664.14937.1 vs. uniprot
Match: H3GG45_PHYRM (Protoheme IX farnesyltransferase, mitochondrial n=19 Tax=Phytophthora TaxID=4783 RepID=H3GG45_PHYRM) HSP 1 Score: 221 bits (564), Expect = 2.160e-66 Identity = 117/209 (55.98%), Postives = 146/209 (69.86%), Query Frame = 1
Query: 127 DRTFVANAQHHLRLYSQLSKHRLSALVMVTTSAGYLAAGGPVDAVTLSCACLGTMLASSSANTFNQVLETSNDSRMKRTRNRPLPSGRISRSHALGWGVASGVTGISILAAGTNPLTAALGAANLFLYVGPYTLSKTRSELNTWVGSVVGAVPPLMGWTAATGAATAVEPLLLALYLFIWQFPHFFSLAWLHREDYARGGFAMVRFREP 753
D T + L +YSQLSK RLSALV++TT AG+L AGGP+ T + A +GT LA++SANTFNQ E D++M+RT RPLPSGRI+R HAL +G A+ +ILAAG +PL A+LGA N+ LY YT K +SELNTWVGSVVGA+PPLMGW AATG A E L A ++ WQ PHFF+L+W R+DY RGG+ MV +P
Sbjct: 61 DVTTTMTLKERLEIYSQLSKARLSALVVMTTGAGFLMAGGPISWGTFAAATVGTSLAAASANTFNQCWEVELDAKMQRTHRRPLPSGRITRPHALAFGAATATASTAILAAGCSPLVASLGAVNIGLYALVYTPMKMKSELNTWVGSVVGAIPPLMGWAAATGTILAPEAALHAYLMYCWQMPHFFALSWRSRKDYGRGGYKMVACNDP 269
BLAST of mRNA_H-elongata_contig72664.14937.1 vs. uniprot
Match: K3WYN9_GLOUD (Protoheme IX farnesyltransferase, mitochondrial n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WYN9_GLOUD) HSP 1 Score: 221 bits (563), Expect = 3.360e-66 Identity = 116/198 (58.59%), Postives = 143/198 (72.22%), Query Frame = 1
Query: 160 LRLYSQLSKHRLSALVMVTTSAGYLAAGGPVDAVTLSCACLGTMLASSSANTFNQVLETSNDSRMKRTRNRPLPSGRISRSHALGWGVASGVTGISILAAGTNPLTAALGAANLFLYVGPYTLSKTRSELNTWVGSVVGAVPPLMGWTAATGAATAVEPLLLALYLFIWQFPHFFSLAWLHREDYARGGFAMVRFREP 753
L +Y QLSK RLS+LV++TT AG+L AGGP+ T + A +GT LA++SANTFNQ E D++M RT RPLPSGRI+R+HA+G+GVA+ T +ILAAG +PL A+LG N+ LY YT KTRSE NTWVGSVVGA+PP+MGW AATG E L A LF WQ PHFF+L+W R DYARGG+ MV +P
Sbjct: 73 LEIYGQLSKVRLSSLVVMTTGAGFLMAGGPISWGTFAAATIGTSLAAASANTFNQAWEVELDAKMNRTCKRPLPSGRITRNHAIGFGVATAATSTAILAAGCSPLVASLGLFNIGLYSLVYTPMKTRSEFNTWVGSVVGAIPPVMGWAAATGTVMTPEAALHAYLLFCWQMPHFFALSWRSRNDYARGGYKMVACADP 270
BLAST of mRNA_H-elongata_contig72664.14937.1 vs. uniprot
Match: A0A7R9YX60_9STRA (Heme O synthase n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9YX60_9STRA) HSP 1 Score: 221 bits (564), Expect = 3.610e-66 Identity = 119/208 (57.21%), Postives = 147/208 (70.67%), Query Frame = 1
Query: 133 TFVANAQHHLRLYSQLSKHRLSALVMVTTSAGYLAAGGPVDAVTLSCACLGTMLASSSANTFNQVLETSNDSRMKRTRNRPLPSGRISRSHALGWGVASGVTGISILAAGTNPLTAALGAANLFLYVGPYTLSKTRSELNTWVGSVVGAVPPLMGWTAATGAATA-VEPLLLALYLFIWQFPHFFSLAWLHREDYARGGFAMVRFREP 753
T + A + +LSK +LSALV+ T++AG+LAAGGP+ TL+ +GT L SSSA+TFNQ+ E D RMKRTRNRPL G +S A ASGV G IL AGT+P+TAALG AN+ LY G YT KT+SE+NTWVG+VVGAVPP+MGWTAATG + +E L LF+WQFPHFF+L+W+HR DYARGGF MV +P
Sbjct: 102 TTTSTASDFAKAVPELSKAKLSALVVSTSTAGFLAAGGPISYPTLAACAVGTALCSSSASTFNQIFEVERDRRMKRTRNRPLVKGVVSPGSAAALATASGVGGGVILLAGTDPVTAALGVANIGLYAGAYTALKTKSEINTWVGAVVGAVPPVMGWTAATGGSLLDLEAAFLGGTLFLWQFPHFFALSWMHRVDYARGGFQMVPVNDP 309
BLAST of mRNA_H-elongata_contig72664.14937.1 vs. uniprot
Match: A0A8K1CPL5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CPL5_PYTOL) HSP 1 Score: 221 bits (562), Expect = 3.990e-66 Identity = 117/193 (60.62%), Postives = 141/193 (73.06%), Query Frame = 1
Query: 160 LRLYSQLSKHRLSALVMVTTSAGYLAAGGPVDAVTLSCACLGTMLASSSANTFNQVLETSNDSRMKRTRNRPLPSGRISRSHALGWGVASGVTGISILAAGTNPLTAALGAANLFLYVGPYTLSKTRSELNTWVGSVVGAVPPLMGWTAATGAATAVEPLLLALYLFIWQFPHFFSLAWLHREDYARGGFAMV 738
L +Y +LSK RLSALV++TT AG+L AGGP+ + + A +GT LA++SANTFNQ E D++M+RT RPLPSGRISRSHAL +G + ILAAG NPL A+LG N+ LY YT KTRSELNTWVGSVVGA+PP+MGW AATG+A A E L A LF WQ PHFF+L+W R DYARGG+ MV
Sbjct: 68 LGIYKELSKARLSALVVMTTGAGFLMAGGPISWGSFAAATVGTSLAAASANTFNQAWEIELDAKMQRTHKRPLPSGRISRSHALAFGATTAAVSTGILAAGCNPLVASLGLFNIGLYSLVYTPMKTRSELNTWVGSVVGAIPPIMGWAAATGSALAPEAALHAYLLFCWQMPHFFALSWRSRNDYARGGYQMV 260
BLAST of mRNA_H-elongata_contig72664.14937.1 vs. uniprot
Match: A0A662XZN3_9STRA (Protoheme IX farnesyltransferase, mitochondrial n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XZN3_9STRA) HSP 1 Score: 220 bits (561), Expect = 7.370e-66 Identity = 116/198 (58.59%), Postives = 144/198 (72.73%), Query Frame = 1
Query: 160 LRLYSQLSKHRLSALVMVTTSAGYLAAGGPVDAVTLSCACLGTMLASSSANTFNQVLETSNDSRMKRTRNRPLPSGRISRSHALGWGVASGVTGISILAAGTNPLTAALGAANLFLYVGPYTLSKTRSELNTWVGSVVGAVPPLMGWTAATGAATAVEPLLLALYLFIWQFPHFFSLAWLHREDYARGGFAMVRFREP 753
+ +YSQLSK RLSALV++TT AG+L AGGP+ T + A +GT LA++SANTFNQ E D++M+RT RPLPSGRI+R HAL +G A+ +ILAAG +PL A+LGA N+ LY YT K RSELNTWVGS+VGA+PPLMGW AATG A E L A +F WQ PHFF+L+W R+DYARGG+ MV +P
Sbjct: 79 MEIYSQLSKARLSALVVMTTGAGFLMAGGPISWGTFAAATVGTSLAAASANTFNQCWEVELDAKMQRTHRRPLPSGRITRQHALTFGAATAAASTAILAAGCSPLVASLGAFNIGLYSLVYTPMKMRSELNTWVGSLVGAIPPLMGWAAATGTLLAPEAALHAYLMFCWQMPHFFALSWRSRKDYARGGYKMVACNDP 276
BLAST of mRNA_H-elongata_contig72664.14937.1 vs. uniprot
Match: A0A7R9UA84_9STRA (Heme O synthase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UA84_9STRA) HSP 1 Score: 218 bits (556), Expect = 8.240e-66 Identity = 113/198 (57.07%), Postives = 145/198 (73.23%), Query Frame = 1
Query: 160 LRLYSQLSKHRLSALVMVTTSAGYLAAGGPVDAVTLSCACLGTMLASSSANTFNQVLETSNDSRMKRTRNRPLPSGRISRSHALGWGVASGVTGISILAAGTNPLTAALGAANLFLYVGPYTLSKTRSELNTWVGSVVGAVPPLMGWTAATGAATAVEPLLLALYLFIWQFPHFFSLAWLHREDYARGGFAMVRFREP 753
L++YS+LSK RLSALV+ TT+AG+L+AG PV T++ AC GT LA+ +A+ FNQ++E D+RM RTR RPLPSGR SR A + + ++IL G NP TAALGA N+FLY YT SK +E NTW+G++VGA+PP+MG+ AATG + E L LA LF+WQFPHFFSLAW+HR+DYARGGF MV +P
Sbjct: 62 LQVYSELSKARLSALVVSTTAAGFLSAGAPVCLSTMALACAGTSLAAGAASCFNQIVERDRDARMVRTRLRPLPSGRASRDEAFALASTASLASVAILYIGVNPATAALGAGNIFLYSVAYTQSKPVTEWNTWIGALVGAIPPVMGYCAATGDVLSGESLFLATSLFLWQFPHFFSLAWIHRKDYARGGFQMVPVNDP 259
BLAST of mRNA_H-elongata_contig72664.14937.1 vs. uniprot
Match: A0A0M0JP87_9EUKA (Heme O synthase n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JP87_9EUKA) HSP 1 Score: 218 bits (555), Expect = 9.910e-66 Identity = 110/193 (56.99%), Postives = 142/193 (73.58%), Query Frame = 1
Query: 175 QLSKHRLSALVMVTTSAGYLAAGGPVDAVTLSCACLGTMLASSSANTFNQVLETSNDSRMKRTRNRPLPSGRISRSHALGWGVASGVTGISILAAGTNPLTAALGAANLFLYVGPYTLSKTRSELNTWVGSVVGAVPPLMGWTAATGAATAVEPLLLALYLFIWQFPHFFSLAWLHREDYARGGFAMVRFREP 753
+LSK RLSALV+ +T+AG+L + GP+D +L+ A GT L + SAN+FNQ++ET ND+ M RT RPLPSGRISR HA+GW ASG G++ LA GTN +T ALGAA L LY YT K R+ LNTWVG+VVGA+PP+MGWTAA G +E +L LF+WQ PHFF+L+W++R DYA+GG+ MV +P
Sbjct: 2 ELSKSRLSALVVGSTAAGHLMSSGPLDLTSLASALGGTFLLAGSANSFNQIIETRNDAAMNRTHKRPLPSGRISRPHAIGWASASGAAGLATLALGTNCMTTALGAATLGLYTLAYTPMKQRTPLNTWVGAVVGAIPPVMGWTAAGGGLLTLEAAVLGSSLFLWQMPHFFALSWMYRSDYAQGGYQMVPLHDP 194 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig72664.14937.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig72664.14937.1 >prot_H-elongata_contig72664.14937.1 ID=prot_H-elongata_contig72664.14937.1|Name=mRNA_H-elongata_contig72664.14937.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=251bp MLRVVDGYLHRPLTRSGFRQALRVGSTGVHRLFKTDGRSNHGDRTFVANAback to top mRNA from alignment at H-elongata_contig72664:166..918- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig72664.14937.1 ID=mRNA_H-elongata_contig72664.14937.1|Name=mRNA_H-elongata_contig72664.14937.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=753bp|location=Sequence derived from alignment at H-elongata_contig72664:166..918- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig72664:166..918- >mRNA_H-elongata_contig72664.14937.1 ID=mRNA_H-elongata_contig72664.14937.1|Name=mRNA_H-elongata_contig72664.14937.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1506bp|location=Sequence derived from alignment at H-elongata_contig72664:166..918- (Himanthalia elongata Himel1 dioecious)back to top |