mRNA_H-elongata_contig72648.14934.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig72648.14934.1 vs. uniprot
Match: A0A6H5K2B1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2B1_9PHAE) HSP 1 Score: 304 bits (779), Expect = 9.370e-100 Identity = 153/217 (70.51%), Postives = 172/217 (79.26%), Query Frame = 1
Query: 10 TDRDWMKPGTRADREELVRILVEDLKASVTVLDMHEYSLLHYAAISGWEGTIVLLLEHGADPRHTCLTGQTALHIAVSLRHGKATEMLLKRCPDLVNESDKEGNRAIHLAVQNLDQEVVKLLVNFSADVNSPNYRRVTPLAAACKLQDLEMVNLLLDLK---------------RLKLARIVGSHEPQATELKVVKAFGQWVPYTDKMGRGVFYYNK 615
T +DWMKPGTRADREE+VRILVEDLKA V VLDMH+YSLLHYA+ISGWEGTI LLLEHG DPR TC+TG+TALH AVSLRHG+A E+LLKR DLVNE+DK+G+RAIHLAVQN D E+V LLV++ AD+NSPNYRRVTPLA ACK QD +MVN LLD K RLKLAR VG E A LK +KA+GQWVPY DKM G+FYYNK
Sbjct: 199 TAQDWMKPGTRADREEMVRILVEDLKADVNVLDMHDYSLLHYASISGWEGTIDLLLEHGIDPRQTCMTGETALHFAVSLRHGEAAEILLKRSQDLVNEADKDGDRAIHLAVQNGDHEIVDLLVDYQADINSPNYRRVTPLAVACKRQDWQMVNHLLDKKAEKKIRWRLKREEEERLKLARAVGDREADAARLKALKAYGQWVPYADKMDGGIFYYNK 415
BLAST of mRNA_H-elongata_contig72648.14934.1 vs. uniprot
Match: D7G1C5_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1C5_ECTSI) HSP 1 Score: 224 bits (572), Expect = 3.880e-69 Identity = 111/155 (71.61%), Postives = 127/155 (81.94%), Query Frame = 1
Query: 154 EGTIVLLLEHGADPRHTCLTGQTALHIAVSLRHGKATEMLLKRCPDLVNESDKEGNRAIHLAVQNLDQEVVKLLVNFSADVNSPNYRRVTPLAAACKLQDLEMVNLLLDLKRLKLARIVGSHEPQATELKVVKAFGQWVPYTDKMGRGVFYYNKV 618
+GTI LLLEHG DPR TC+TG+TALH AVSLRHG+A E+LLKR DLVNE+DK+G+RAIHLAVQN D E+V LLV++ AD+NSPNYRRVTPLA ACK QD +MVN LLD K LAR VG E A LK +KA+GQWVPYTDKMG G+FYYNKV
Sbjct: 201 QGTIDLLLEHGIDPRQTCMTGETALHFAVSLRHGEAAEILLKRSQDLVNEADKDGDRAIHLAVQNGDHEIVNLLVDYQADINSPNYRRVTPLAVACKRQDWQMVNHLLDKK---LARAVGDREADAARLKALKAYGQWVPYTDKMGGGIFYYNKV 352
BLAST of mRNA_H-elongata_contig72648.14934.1 vs. uniprot
Match: A0A835Z5D7_9STRA (Ankyrin repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5D7_9STRA) HSP 1 Score: 173 bits (439), Expect = 1.710e-47 Identity = 102/253 (40.32%), Postives = 136/253 (53.75%), Query Frame = 1
Query: 19 DWMKPGTRADREELVRILVEDLKASVTVLDMHEYSLLHYAAISGWEGTIVLLLEHGADPRHTCLTGQTALHIAVSLRHGKATEMLLKRCPDLVNESDKEGNRAIHLAVQ-NLDQEVVKLLVNFSADVNSPNYRRVTPLAAACKLQDLEMVNLLLDLK-----------------------------RLKLARIVGSHEPQATELKVV-----------------------KAFGQWVPYTDKMGRGVFYYNKV 618
DW+ PG R RE LV L+ A V LD+H+Y+ LHYAA+ GW G++ LL+ GADP H +TG+TALH+A+ RHG A E LL P LV+ESD++G RAIH A++ +E ++LL + AD+N+P+Y VTPL AC LQD V+ LLDLK R +LA+ S + + + +A+GQWVPY DK GRG+FYYNKV
Sbjct: 319 DWLPPGDREARERLVERLLA-AGARVNALDLHDYTCLHYAAMLGWVGSVEALLKAGADPGHKSVTGETALHLAIERRHGAAAESLLLASPSLVDESDRDGTRAIHTAIRCRCGREFLELLADHKADMNAPDYSGVTPLQLACSLQDHAAVSALLDLKVVRESPALALLKGDDGDRIRARIAQEDAERARLAQDALSAQASDAQARXXXXXXXXXXXXXXXXXXXXXXXAHRAYGQWVPYIDKQGRGIFYYNKV 570
BLAST of mRNA_H-elongata_contig72648.14934.1 vs. uniprot
Match: A0A8J2X0P4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X0P4_9STRA) HSP 1 Score: 75.5 bits (184), Expect = 2.040e-12 Identity = 51/166 (30.72%), Postives = 74/166 (44.58%), Query Frame = 1
Query: 214 GQTALHIAVSLRHGKATEMLLKRCPDLVNESDKEGNRAIHLAVQNLDQEVVKLLVNFSADVNSPNYRRVTPLAAACKLQDLEMVNLLLD-----------------LKRLKLARIVGSHEPQATELKVVK--------------AFGQWVPYTDKMGRGVFYYNKV 618
GQ AL + H ++LL + + +G A+H A E V+ L+ F A+VN +Y R TPL AC+ Q +++V+ LLD L + L R+ + E + +K A G WVPY DK GRG+FYYN+V
Sbjct: 270 GQNALMLCADFLHVPLIDLLLSETEISIESKNVDGETALHYAALRGSMEAVEALLEFGANVNCESYARDTPLKRACRQQRVDLVHKLLDYDCNRRPSAFAILEGEALMEITL-RLDEEKRKKVEEYEKLKRLEAAGKNKKGKKSAIGAWVPYRDKRGRGIFYYNRV 434
BLAST of mRNA_H-elongata_contig72648.14934.1 vs. uniprot
Match: A0A5N5Q627_PANHP (Uncharacterized protein n=2 Tax=Pangasianodon hypophthalmus TaxID=310915 RepID=A0A5N5Q627_PANHP) HSP 1 Score: 67.4 bits (163), Expect = 1.330e-9 Identity = 46/156 (29.49%), Postives = 83/156 (53.21%), Query Frame = 1
Query: 46 DREELVRILVEDLKASVTVLDMHE---YSLLHYAAISGWEGTIVLLLEHGADPRHTCLTGQTALHIAVSLRHGKATEMLLKR------CPDL-VNESDKEGNRAIHLAVQNLDQEVVKLLVNFSADVNSPNYRRV-TPLAAACKLQDLEMVNLLLD 480
++E +V L+ L+ + LD++ + LH A I+ G + LL+ GADP GQTALH+ + ++L CP +N + EG +HLAVQ+ ++++ K+L++ AD+N+ + + +PL A + +EM+N L++
Sbjct: 231 EKEAVVHWLIHILRQARKDLDLYNNLRQTPLHLAVITHQPGVVEALLQGGADPEALDRNGQTALHLCCEHQQDACLRVILSHLSRLPCCPSACLNSRNFEGLTPLHLAVQDGNKKLAKMLLDSGADINAVDIKSGRSPLIYAVEKSCMEMINFLVE 386
BLAST of mRNA_H-elongata_contig72648.14934.1 vs. uniprot
Match: UPI0003817DFC (ankyrin repeat domain-containing protein n=1 Tax=Thiofilum flexile TaxID=125627 RepID=UPI0003817DFC) HSP 1 Score: 66.6 bits (161), Expect = 3.020e-9 Identity = 47/153 (30.72%), Postives = 80/153 (52.29%), Query Frame = 1
Query: 43 ADREELVRILVEDLKASVTVLDMHEYSLLHYAAISGWEGTIVLLLEHGADPRHTCLTGQTALHIAVSLRHGKATEMLLKRCPDL-----VNESDKEGNRAIHLAVQNLDQEVVKLLVNFSADVNSPNYRRVTPLAAACKLQDLEMVNLLLDLK 486
A++E + L+++L + E + L +A S + TI +LL+ GADP G + IA +L + K + LLK + +++ DK GN A+HLAV N + +++LL+ A+ N +TPL A + +L ++N LL+ K
Sbjct: 1965 ANQERITLTLLDNLSIADMTNSKRE-TPLQWAIYSQAQNTIKVLLQAGADPNLVNQAGNNTVLIAANLPNEKTLKSLLKIAQEQDVKLNLDQRDKNGNTALHLAVLNQNPAIIELLLQAGANTEIYNNDSLTPLLLAVEKPNLVIINSLLNYK 2116
BLAST of mRNA_H-elongata_contig72648.14934.1 vs. uniprot
Match: A0A4Q2DHH1_9AGAR (AAA_16 domain-containing protein n=1 Tax=Candolleomyces aberdarensis TaxID=2316362 RepID=A0A4Q2DHH1_9AGAR) HSP 1 Score: 63.9 bits (154), Expect = 2.420e-8 Identity = 39/107 (36.45%), Postives = 58/107 (54.21%), Query Frame = 1
Query: 124 LLHYAAISGWEGTIVLLLEHGADPRHTCLTGQ-TALHIAVSLRHGKATEMLLKRCPDLVNESDKEGNRAIHLAVQNLDQEVVKLLVNFSADVNSPNYRRVTPLAAAC 441
LLH A +LLE GA+P C + TA+H+A + E++LK + ++ DK+ A+HLAV N + +VK+L+ ADVN ++R TPL AC
Sbjct: 877 LLHVAIKDDKLHVAQMLLELGANPNTPCGPNEWTAIHVAAFRQDPCFVELILKWSKNCISLQDKKRKTALHLAVLNGFESLVKILLEHGADVNGQDWRGNTPLLIAC 983
BLAST of mRNA_H-elongata_contig72648.14934.1 vs. uniprot
Match: A0A7M7PCZ6_STRPU (ZU5 domain-containing protein n=1 Tax=Strongylocentrotus purpuratus TaxID=7668 RepID=A0A7M7PCZ6_STRPU) HSP 1 Score: 63.5 bits (153), Expect = 3.280e-8 Identity = 45/129 (34.88%), Postives = 69/129 (53.49%), Query Frame = 1
Query: 61 VRILVEDLKASVTVLDMHEYSLLHYAAISGWEGTIVLLLEHGADPRHTCLTGQTALHIAVSLRHGKATEMLLKRCPDLVNESDKEGNRAIHLAVQNLDQEVVKLLVNFSADVNSPNYRRVTPLAAACKL 447
VR+L+E+ A V D ++ LHYAA+SG E + +LL+ R + GQ +H+A+S + + LL + LVN SD +G +HLA V++LL++ A++N TPL A KL
Sbjct: 1189 VRLLLEN-NADVEAEDAEGWTALHYAAVSGNETVMEVLLDRRLTSRLS-RRGQLPIHVAISSGNVDISNSLLNKDSSLVNFSDGDGLTPVHLATIKGLTSVLELLLSRGAELNGQANDGQTPLHLAVKL 1315
BLAST of mRNA_H-elongata_contig72648.14934.1 vs. uniprot
Match: UPI0013597EC8 (ankyrin repeat domain-containing protein n=1 Tax=Chryseobacterium sp. c4a TaxID=1573582 RepID=UPI0013597EC8) HSP 1 Score: 60.5 bits (145), Expect = 4.390e-8 Identity = 46/147 (31.29%), Postives = 73/147 (49.66%), Query Frame = 1
Query: 40 RADREELVRILVEDLKASVTVLDMHEYSLLHYAAISGWEGTIVLLLEHGADPRHTCLTGQTALHIAVSLRHGKATEMLLKRCPDLVNESDKEGNRAIHLAVQNL--DQEVVKLLVNFSADVNSPNYRRVTPLAAACKLQDLEMVNLL 474
R ++ E +R V + + + + H+ L A +E LL D H+ G+T LH A + K+T++LL +N+ D GN A+ +AV N + ++VKLL AD+NS N +PL A ++ D EMV +L
Sbjct: 14 RINQFESLRKEVNENNVNEFINEYHQNLLQEAIAYKKYE-IAAYLLYCDIDVNHSDKDGKTPLHYATAHNDIKSTQLLLNEDAMEINKKDIYGNNALWVAVFNARGNYDIVKLLKQHDADINSKNKNNKSPLDFAKQIGDEEMVKIL 159
BLAST of mRNA_H-elongata_contig72648.14934.1 vs. uniprot
Match: A0A6G0XD07_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XD07_9STRA) HSP 1 Score: 62.8 bits (151), Expect = 5.370e-8 Identity = 42/116 (36.21%), Postives = 59/116 (50.86%), Query Frame = 1
Query: 127 LHYAAISGWEGTIVLLLEHGADPRHTCLTGQTALHIAVSLRHGKATE------------MLLKRCPDLVNESDKEGNRAIHLAVQNLDQEVVKLLVNFSADVNSPNYRRVTPLAAA 438
L +A I G + + +LLEHGADPR T G T L A + G+ T+ MLL +CP+LVN D++G+ A+HLA + + L+ AD+ N TPL A
Sbjct: 138 LVWACIEGRDEAVAILLEHGADPRVTNHYGATTLMCATMI--GEETDEDSDGARRNIVNMLLAKCPELVNAQDRDGSTAMHLAASCGYLQCCQALLAGGADITLRNAVGQTPLEEA 251 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig72648.14934.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig72648.14934.1 >prot_H-elongata_contig72648.14934.1 ID=prot_H-elongata_contig72648.14934.1|Name=mRNA_H-elongata_contig72648.14934.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=198bp MKPGTRADREELVRILVEDLKASVTVLDMHEYSLLHYAAISGWEGTIVLLback to top mRNA from alignment at H-elongata_contig72648:991..2960+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig72648.14934.1 ID=mRNA_H-elongata_contig72648.14934.1|Name=mRNA_H-elongata_contig72648.14934.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1970bp|location=Sequence derived from alignment at H-elongata_contig72648:991..2960+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig72648:991..2960+ >mRNA_H-elongata_contig72648.14934.1 ID=mRNA_H-elongata_contig72648.14934.1|Name=mRNA_H-elongata_contig72648.14934.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1188bp|location=Sequence derived from alignment at H-elongata_contig72648:991..2960+ (Himanthalia elongata Himel1 dioecious)back to top |