mRNA_H-elongata_contig7248.14916.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig7248.14916.1 vs. uniprot
Match: A0A6H5JHP9_9PHAE (Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHP9_9PHAE) HSP 1 Score: 156 bits (394), Expect = 1.550e-40 Identity = 79/165 (47.88%), Postives = 106/165 (64.24%), Query Frame = 1
Query: 88 QHAAMTSDGWTSCSNDTYHSFTASFIDDEFDLHELAMDFKKMSEKTAGTNLADNVKCLIDSHGIARYVTAAVTDCKTSMIVYGRELEKRDITTHIGCCNHLFECTTALVFNEPGIKRTIALQRALVTRYTKSSQMADRLEEICGILQV-----VQDGETRWNSTF 567
+H A+TSDGWT SNDTY SFT ++I FDL L ++ KK +TAG +L + VK +I +G+ A TDC+ SM+ GR LE+ + TH+GC H E T+ F PG+ + +AL R +VTRYT SSQ +DRLE++C I+QV VQD ETRW ST+
Sbjct: 4 EHVALTSDGWTPASNDTYMSFTCTYISSNFDLVALCLECKKHGWRTAGEDLVEAVKAMIARNGLTGRTVAITTDCELSMVKAGRLLEENEGVTHLGCFCHRLESITSQAFGGPGVSKALALARGVVTRYTISSQASDRLEQVCDIVQVERKNVVQDVETRWWSTY 168
BLAST of mRNA_H-elongata_contig7248.14916.1 vs. uniprot
Match: A0A6H5JJV8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJV8_9PHAE) HSP 1 Score: 149 bits (376), Expect = 3.270e-39 Identity = 79/177 (44.63%), Postives = 110/177 (62.15%), Query Frame = 1
Query: 70 REILER---QHAAMTSDGWTSCSNDTYHSFTASFIDDEFDLHELAMDFKKMSEKTAGTNLADNVKCLIDSHGIARYVTAAVTDCKTSMIVYGRELEKRDITTHIGCCNHLFECTTALVFNEPGIKRTIALQRALVTRYTKSSQMADRLEEICGILQV-----VQDGETRWNSTFSLV 576
+E+L R +H A+TSDGWTS SNDTY FT ++I FDL L ++ KK +T G +L + VK +I +G+ A TDC+ SM+ GR LE+ + TH+GC H E T+ F PG+ + +AL R +VTRY SSQ +DRLE++ I+QV VQD ETRW ST++ +
Sbjct: 39 QEVLGRLTGEHVAVTSDGWTSASNDTYMYFTCTYISSNFDLVALCVECKKHGGRTTGEDLVEAVKAMIARNGLTSRTVATTTDCEPSMVKAGRLLEENEGVTHLGCFCHRLESITSQAFGGPGVSKALALARRVVTRYNMSSQASDRLEQMRDIVQVERKKVVQDVETRWWSTYASI 215
BLAST of mRNA_H-elongata_contig7248.14916.1 vs. uniprot
Match: D8LCS5_ECTSI (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS5_ECTSI) HSP 1 Score: 147 bits (371), Expect = 4.470e-38 Identity = 87/198 (43.94%), Postives = 122/198 (61.62%), Query Frame = 1
Query: 1 KLPTRRQLVDDFEETRDDLYQGAREILERQHAAMTSDGWTSCSNDTYHSFTASFIDDEFDLHELAMDFKKMSEKTAGTNLADNVKCLIDSHGIARYVTAAVTDCKTSMIVYGRELEKRDIT-THIGCCNHLFECTTALVFNEPGIKRTIALQRALVTRYTKSSQMADRLEEICGILQ-----VVQDGETRWNSTFSLV 576
K+P+RR+L+ + L +L+ + A+T+DGWTS +N++Y S T ++ID E+ LH L++D K + T G +LA V +++ H + V A VTDC+ SMI GR LE T +HIGC NH E TT+ VFN + + L R LV RY KSSQMA RL ++CGILQ V+QD ETRW ST+++V
Sbjct: 10 KVPSRRELLSRMRAVKTALESEVALMLDAEFVAITTDGWTSRNNESYMSLTVAYIDYEWKLHHLSLDCAKHTGTTTGEDLAALVAGMVERHDLTGRVIACVTDCEPSMIKAGRLLEVDGSTISHIGCSNHRMESTTSSVFNGRSLG-ALGLARTLVGRYKKSSQMAARLVQLCGILQMEPLSVMQDVETRWWSTWAMV 206
BLAST of mRNA_H-elongata_contig7248.14916.1 vs. uniprot
Match: A0A6H5KUY5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUY5_9PHAE) HSP 1 Score: 139 bits (350), Expect = 3.500e-35 Identity = 81/199 (40.70%), Postives = 121/199 (60.80%), Query Frame = 1
Query: 1 KLPTRRQLVDDFEETRDDLYQGAREILERQHAAMTSDGWTSCSNDTYHSFTASFIDDEFDLHELAMDFKKMSEKTAGTNLADNVKCLIDSHGIARYVTAAVTDCKTSMIVYGRELEKRDITT-HIGCCNHLFECTTALVFNEPGIKRTIALQRALVTRYTKSSQMADRLEEICGILQ-----VVQDGETRWNSTFSLVK 579
+ P RR LV+ E + +L +L+ ++ A+T+DGWTS SN++Y S T ++ID + LH L+++ K + T G +LA + +I+ HG+ VTA VTDC+ SM+ GR LE HIGC NH E TT+ VFN + +A RA+V RY +SSQM+ RL GIL+ V+QD ETRW S++++++
Sbjct: 46 RAPIRRALVEKMREIKKNLESEVALMLDDEYVAITTDGWTSRSNESYMSLTVAYIDVGWQLHHLSLNCTKHTGSTHGEDLAREITSMIERHGLTGRVTACVTDCEPSMVKAGRLLEVGGSNLEHIGCSNHRMESTTSSVFNGKSLG-ALAKARAVVGRYKRSSQMSGRLAVFIGILKLSPLSVLQDVETRWWSSWAMIE 243
BLAST of mRNA_H-elongata_contig7248.14916.1 vs. uniprot
Match: A0A6H5KVI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVI1_9PHAE) HSP 1 Score: 132 bits (333), Expect = 1.170e-33 Identity = 68/153 (44.44%), Postives = 96/153 (62.75%), Query Frame = 1
Query: 121 SCSNDTYHSFTASFIDDEFDLHELAMDFKKMSEKTAGTNLADNVKCLIDSHGIARYVTAAVTDCKTSMIVYGRELEKRDITTHIGCCNHLFECTTALVFNEPGIKRTIALQRALVTRYTKSSQMADRLEEICGILQV-----VQDGETRWNST 564
S SNDTY +FT ++I FDL L +++KK +T G +L + VK +I +G+ A TDC+ M+ GR LE+ + +H+GC H FE T+ F PG+ + +AL R +VTRYT SSQ ++RLE++C I+QV VQD ETRW ST
Sbjct: 3 SASNDTYMTFTCTYISSNFDLVALCLEYKKHGGRTTGEDLVEAVKAMIARNGLTGRTVATTTDCEPFMVKAGRLLEENEGVSHLGCFCHRFESITSQAFGGPGVSKALALPRGVVTRYTMSSQASNRLEQMCDIVQVERKKVVQDVETRWWST 155
BLAST of mRNA_H-elongata_contig7248.14916.1 vs. uniprot
Match: A0A6H5L7Y8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7Y8_9PHAE) HSP 1 Score: 130 bits (328), Expect = 1.090e-31 Identity = 67/171 (39.18%), Postives = 99/171 (57.89%), Query Frame = 1
Query: 1 KLPTRRQLVDDFEETRDDLYQGAREILERQHAAMTSDGWTSCSNDTYHSFTASFIDDEFDLHELAMDFKKMSEKTAGTNLADNVKCLIDSHGIARYVTAAVTDCKTSMIVYGRELE-KRDITTHIGCCNHLFECTTALVFNEPGIKRTIALQRALVTRYTKSSQMADRLEE 510
++P ++ V + + + ++E + +TSDGWTSC+NDTY S T + I + L L++D K T G LA +K + HG+ VTA TDC+ SM+ GR L ++T IGCCN+ E T+++VFN P +K+ + L R LVTRY SSQ ADRL++
Sbjct: 10 RVPEKKDCVTTMRTVKKCMMEKVSRLIEGEQVCITSDGWTSCANDTYMSLTFTLITSAWKLVTLSVDCSKSEGTTTGDALAAGIKATVAKHGLTGKVTAVTTDCEPSMVKMGRLLAGDATVSTQIGCCNYRLESTSSIVFNGPRVKKVMVLARGLVTRYPTSSQAADRLKQ 180
BLAST of mRNA_H-elongata_contig7248.14916.1 vs. uniprot
Match: UPI00094EF16C (zinc finger BED domain-containing protein 1-like n=1 Tax=Hippocampus comes TaxID=109280 RepID=UPI00094EF16C) HSP 1 Score: 78.2 bits (191), Expect = 1.660e-13 Identity = 56/193 (29.02%), Postives = 95/193 (49.22%), Query Frame = 1
Query: 4 LPTRRQLVDDFEETRDDLYQGAREILERQHA-AMTSDGWTSCSNDTYHSFTASFIDDEFDLHELAMDFKKMSEKTAGTNLADNVKCLIDSHGIARYVTAAVTDCKTSMIVYGRELEKRDITTHIGCCNHLFECTTALVFNEPGIKRTIALQRALVTRYTKSSQMADRLEEICGILQVVQDGETRWNSTFSLVK 579
LPTRR L EE + A++++ + A ++T+D WTS + D Y + T FID+ LH + + N+A L+ GI+ VT VTD +M R+L R T++ L E T L +R + ++ T T+ +Q+ +++ +L+++Q+ ETRWNSTF +++
Sbjct: 92 LPTRRTLKAMVEERYQQAKEKAQDLIAKSSAVSITADMWTSINTDAYLAVTCHFIDEHTSLHSAVLGVLHFPDHHTAENMASVQSALMAQWGISTKVTCLVTDGAANMAACARDLHLRH--TYLIVKKALAE-NTELSEIRLQCRRIVGYFKSSTTAKTRLTQVQEQMMPTEPVLKLIQEVETRWNSTFHMLQ 281
BLAST of mRNA_H-elongata_contig7248.14916.1 vs. uniprot
Match: UPI000CE1F3DA (zinc finger BED domain-containing protein 4-like n=10 Tax=Oryzias latipes TaxID=8090 RepID=UPI000CE1F3DA) HSP 1 Score: 75.5 bits (184), Expect = 1.790e-12 Identity = 56/199 (28.14%), Postives = 97/199 (48.74%), Query Frame = 1
Query: 4 LPTRRQLVDDFEETRDDLYQGAREILERQHA-AMTSDGWTSCSNDTYHSFTASFIDDEFDLHELAMDFKKMSEKTAGTNLADNVKCLIDSHGIARYVTAAVTDCKTSMIVYGRELEKRDITTHIGCCNHLFECTTALVFNE-PGIKRTIALQRALVTRYTKSSQMADRLEEICGIL-----QVVQDGETRWNSTFSLVK 579
+P R+ L EE + A +++ R A ++T+D WTS + DTY + T FI +E +L + + K + +LA+ L++ GI VT VTDC +M+ L R HI C H+ + P ++ + R +V + S+ ++L E+ L +++Q+ ETRWNSTF++++
Sbjct: 108 IPNRKALRTMVEEKYKAKKEKALDVVSRASAVSLTADMWTSINMDTYLAVTCHFITEEVELASVVLGVLKFPQTHTAAHLAEAKNLLMEEWGIKGKVTGLVTDCAPNMVACANILLLR----HIMCFAHMLNLVVKKSLAQTPELEDIRSKGRRIVGLFKSSTTAKEKLSEMQRQLARPEHKLIQEVETRWNSTFNMLE 302
BLAST of mRNA_H-elongata_contig7248.14916.1 vs. uniprot
Match: UPI001EE5E460 (zinc finger BED domain-containing protein 4-like n=1 Tax=Haliotis rubra TaxID=36100 RepID=UPI001EE5E460) HSP 1 Score: 74.7 bits (182), Expect = 1.930e-12 Identity = 43/173 (24.86%), Postives = 84/173 (48.55%), Query Frame = 1
Query: 76 ILERQHAAMTSDGWTSCSNDTYHSFTASFIDDEFDLHELAMDFKKMSEKTAGTNLADNVKCLIDSHGIARYVTAAVTDCKTSMIVYGRELEKRDITTHIGCCNHLFECTTALVFNEPGIKRTIALQRALVTRYTKSSQMADRLEEICGILQV-----VQDGETRWNSTFSLVK 579
I A+T+DGWTS S ++Y + TA ++++++ L + + + E G NLA+ + +D + ++ A++ S IV +++ HI C H + P + R + R +V+ + +SS A L +L++ +QD TRWNS++ +++
Sbjct: 123 IARASSMAVTTDGWTSRSTESYITITAHYVNEDWQLENPVLQTRTLQESHTGANLANVLDSAVDEWNLGKFSQIAISTDNASNIVSA--VKQSRFAPHIRCFAHTINIASQKAMQVPQMSRILGRVRRIVSFFHRSSHAASVLRSKQLLLELPDHKLIQDVSTRWNSSYDMLQ 293
BLAST of mRNA_H-elongata_contig7248.14916.1 vs. uniprot
Match: UPI000CE219EE (zinc finger BED domain-containing protein 4-like n=2 Tax=Oryzias latipes TaxID=8090 RepID=UPI000CE219EE) HSP 1 Score: 74.3 bits (181), Expect = 2.960e-12 Identity = 55/199 (27.64%), Postives = 96/199 (48.24%), Query Frame = 1
Query: 4 LPTRRQLVDDFEETRDDLYQGAREILERQHA-AMTSDGWTSCSNDTYHSFTASFIDDEFDLHELAMDFKKMSEKTAGTNLADNVKCLIDSHGIARYVTAAVTDCKTSMIVYGRELEKRDITTHIGCCNHLFECTTALVFNE-PGIKRTIALQRALVTRYTKSSQMADRLEEICGIL-----QVVQDGETRWNSTFSLVK 579
+P R+ L EE + A +++ R A ++T+D WTS + D Y + T FI +E +L + + K + +LA+ L++ GI VT VTDC +M+ L R HI C H+ + P ++ + R +V + S+ ++L E+ L +++Q+ ETRWNSTF++++
Sbjct: 108 IPNRKALRTMVEEKYKAKKEKALDVVSRASAVSLTADMWTSINMDAYLAVTCHFITEEVELASVVLGVLKFPQTHTAAHLAEAKNLLMEEWGIKGKVTGLVTDCAPNMVACANTLLLR----HIMCFAHMLNLVVKKPLAQTPELEDIRSKGRRIVGLFKSSTTAKEKLSEMQRQLARPEHKLIQEVETRWNSTFNMLE 302 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig7248.14916.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig7248.14916.1 >prot_H-elongata_contig7248.14916.1 ID=prot_H-elongata_contig7248.14916.1|Name=mRNA_H-elongata_contig7248.14916.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=197bp KLPTRRQLVDDFEETRDDLYQGAREILERQHAAMTSDGWTSCSNDTYHSFback to top mRNA from alignment at H-elongata_contig7248:1688..2293- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig7248.14916.1 ID=mRNA_H-elongata_contig7248.14916.1|Name=mRNA_H-elongata_contig7248.14916.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=606bp|location=Sequence derived from alignment at H-elongata_contig7248:1688..2293- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig7248:1688..2293- >mRNA_H-elongata_contig7248.14916.1 ID=mRNA_H-elongata_contig7248.14916.1|Name=mRNA_H-elongata_contig7248.14916.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1182bp|location=Sequence derived from alignment at H-elongata_contig7248:1688..2293- (Himanthalia elongata Himel1 dioecious)back to top |