mRNA_H-elongata_contig7244.14911.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig7244.14911.1
Unique NamemRNA_H-elongata_contig7244.14911.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig7244.14911.1 vs. uniprot
Match: A0A6H5KHM1_9PHAE (HAMP domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KHM1_9PHAE)

HSP 1 Score: 443 bits (1139), Expect = 9.020e-139
Identity = 262/504 (51.98%), Postives = 321/504 (63.69%), Query Frame = 1
Query:    7 QDLILDGGGLGYPLSPAHEDLRDTDLEDDD-------------IDYTRSVWYYADDTSADAVVEDEDDLTTISNTARLDLLWPTMYFNSNDTNAVYAAVPLKTDDDMVFRLFPGRALSSDAGTLFGCSDPDESG---CYDATKRPWYEAAIAENVEREGSTGLGKAILSAPYTDAIDPESTWLVTLARAVYADDD----SLLGVVGVDVKLEQMQLSIEGLSFLTSGYSILATADNGTVLAAPDGIWDRDAEDESSNLCSLDSGICS--ESD-WDELT-SAEQGEVFRFRDDGGDGEEHIL----VITPVNATFELDL--GVGSTTHYILSAVPVSEIFEPVEGMADLIQTSTAQIMATTGFVAVATLAAVAIAVCVLAGNITRPIKKMTEAAQSIARDGAKTNVFGGVAADWKAGRDGGSSSGDGFP---------RRTRAIDYMLCRGEDEIDTLVREFSLMITGLGRRGQASTAIGLEETSVYPKNPFTTSFERAPPTAPS 1401
            +DL+L GG  GYPLSPAH DLRD ++ +               +D +RSVWYYAD  S    V   +D   I+ +ARLDLLWP MY NSNDT  +   V L T + M FR FPG  LS+  G+ F C D  E G   CYD T+R WYE A A  ++ E  T LG AI++ PYTDA+  E+ WLVTLARAVY +      SLLGVVGVD++LEQ+Q S+EG++FL +GYSILATAD G VLAA    WDRD  +  + +C L +GICS  E D W++L    + G +  F+     G         +  P+  TF   +  G G  THYILSAVP  EIF+PV+GMADLI+ ST +IM TT  VA +TL AVA++V  LAG+ITRPI KMT AA+SI++DGAKT+VFG VAA W   RDG S +GD             RT  +DY+LCRG+DEI TL REF LMITGLGRRG A+ A GL E SVYPKNPFTT F R PPT P+
Sbjct:  106 EDLVLAGGEEGYPLSPAHTDLRDIEITESSEANLVGFSRQDVLVDLSRSVWYYADAESNTVEVSAAEDQLKINQSARLDLLWPAMYINSNDTKGILLGVELSTTNQM-FRYFPGTDLSAVEGSAFACEDVQEDGTSPCYDPTERDWYELADAAVMDSE--TFLGGAIVTPPYTDAVGSENDWLVTLARAVYRNSGTTSGSLLGVVGVDMRLEQVQESVEGINFLETGYSILATADEGVVLAAG-AAWDRDTAENITKVCDLGNGICSGDEGDSWEDLLLETKNGGIKTFKAVSTTGXXXXXXXXXIAAPITTTFGTAVSGGEGKVTHYILSAVPRDEIFQPVDGMADLIRESTTEIMVTTAIVACSTLVAVALSVYFLAGSITRPIVKMTSAARSISKDGAKTDVFGSVAATWGGRRDGSSGAGDSIDSRTAGRYTMNRTACLDYLLCRGDDEISTLAREFQLMITGLGRRGAAAEATGLAEASVYPKNPFTTDFIRPPPTNPT 605          
BLAST of mRNA_H-elongata_contig7244.14911.1 vs. uniprot
Match: D8LT17_ECTSI (Methyl-accepting chemotaxis protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT17_ECTSI)

HSP 1 Score: 430 bits (1105), Expect = 6.860e-134
Identity = 265/507 (52.27%), Postives = 322/507 (63.51%), Query Frame = 1
Query:    7 QDLILDGGGLGYPLSPAHEDLRDTDLEDD-------------DIDYTRSVWYYADDTSADAVVEDEDDLTTISNTARLDLLWPTMYFNSNDTNAVYAAVPLKTDDDMVFRLFPGRALSSDAGTLFGCSDPDESG----CYDATKRPWYEAAIAENVEREGSTGLGKAILSAPYTDAIDPESTWLVTLARAVYADDDS----LLGVVGVDVKLEQMQLSIEGLSFLTSGYSILATADNGTVLAAPDGIWDRDAEDESSNLCSLDSGICSESDWDE----LTSAEQGEV--FRFRDDGGDGEEHILVITPVNATFELDL--GVGSTTHYILSAVPVSEIFEPVEGMADLIQTSTAQIMATTGFVAVATLAAVAIAVCVLAGNITRPIKKMTEAAQSIARDGAKTNVFGGVAADWKAGRDGGSSSGDG-----------FPRRTRAIDYMLCRGEDEIDTLVREFSLMITGLGRRGQASTAIGL-EETSVYPKNPFT-TSFERAPPTAPS 1401
            ++L+LDGG  GYPL+PAH DLRDT++                ++D +RS WYYAD  S    V  ED++ TI+ TARLDLLWP +Y NS DT  VY  V L T    + R FPG  LS   G+ F C   +E G    C+D T RPWY+ A  E+   +  T LG AI+S PY DAID E  WL++LARAVY+D  S    LLGVVG+DV+LEQ+Q S+EG++FL +GYSILATAD G VLAA  G+WD+DA +E+  +C++ +GICS SD DE    L   E G +  F      G  EE ILV  PV   F      G G+ THYILSAVP +EIFEPV GMAD I+ ST QI+ TT  VA  TL AVA++V  LAG+ITRPI KMT AA+SIA DGAKT+VFG V A W A RD    S DG              RT  +DY+LCRG+DEI TL REFSLMITGLGRRG A+ A GL +E + YPKNP+  T  +R PPT PS
Sbjct:  105 ENLVLDGGNEGYPLTPAHTDLRDTEIATSAEANLQNFSRMSFEVDLSRSTWYYADAESYTVEVP-EDEMATITQTARLDLLWPAVYINSYDTKGVYVGVELSTTGRTI-RYFPGTDLSGVEGSRFACEYVEEDGSIAPCFDPTVRPWYQGA--EDAAVDSGTSLGAAIISDPYKDAIDDE--WLLSLARAVYSDSGSTRGNLLGVVGMDVRLEQVQESVEGINFLNTGYSILATAD-GIVLAA--GVWDKDATEEAPTVCAIGNGICSGSDGDEWVDLLAEIENGGIKSFTSTSTAGVDEEWILVAAPVEGNFATATSGGAGTVTHYILSAVPRNEIFEPVVGMADSIRDSTVQIIVTTAIVACFTLVAVALSVYFLAGSITRPIVKMTSAARSIAADGAKTDVFGSVMATWGARRDSARDSADGRGIDVSTPGRFTVNRTACLDYLLCRGDDEISTLGREFSLMITGLGRRGSAAEATGLMDERAGYPKNPYAATIVKRPPPTGPS 602          
BLAST of mRNA_H-elongata_contig7244.14911.1 vs. uniprot
Match: D8LT16_ECTSI (HAMP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT16_ECTSI)

HSP 1 Score: 408 bits (1048), Expect = 1.070e-125
Identity = 250/484 (51.65%), Postives = 309/484 (63.84%), Query Frame = 1
Query:    7 QDLILDGGGLGYPLSPAHEDLRDTDLEDD-------------DIDYTRSVWYYADDTSADAVVEDEDDLTTISNTARLDLLWPTMYFNSNDTNAVYAAVPLKTDDDMVFRLFPGRALSSDAGTLFGCSDPDESG----CYDATKRPWYEAAIAENVEREGSTGLGKAILSAPYTDAIDPESTWLVTLARAVYADDD----SLLGVVGVDVKLEQMQLSIEGLSFLTSGYSILATADNGTVLAAPDGIWDRDAEDESSNLCSLDSGICSESD---WDELTS-AEQGEVFRFRDDGGDG--EEHILVITPVNATFELDL--GVGSTTHYILSAVPVSEIFEPVEGMADLIQTSTAQIMATTGFVAVATLAAVAIAVCVLAGNITRPIKKMTEAAQSIARDGAKTNVFGGVAADWKAGRDGGSSSGDGFPRRTRAIDYMLCRGEDEIDTLVREFSLMITGLGRRGQASTAIGL-EETSVYPKNPFTT 1368
            +DL+L GG  GYPL+PAH DLRDT++                ++D +RS WYYAD  S    V  ED++ TI+ TARLDLLWP +Y NS +T  VY  V L T     FR FPG  LS   G+ F C   +E G    C+D T RPWYE A  E+ + E  T LG AI++ P+  AID +  WLV LARAVY++      SLLGVVG+DV+LE++Q S+E ++FL +GYSILATAD G VLAA  G+WD DA +E+  +C L  GICS  D   W +L +  E GEV  F     DG  EE ILV  PV  TF+  +  G G+ THYILSAVP +EIFE V GM D+I  ST QI+  T  VA  TL AVA++V  LAG+I RPI KMT+AA+SI  DGA+T+VFG VAADW   +D     G G     R +DY+LCRG+DEI TL REF LMITGLG+RG A+ AIGL EE + YP NPFT+
Sbjct:  105 EDLVLAGGDEGYPLTPAHTDLRDTEIATSAEANLQNFTRMNFEVDLSRSTWYYADAESYTVEVP-EDEMATITQTARLDLLWPAVYINSYETKGVYVGVELSTTG-RTFRYFPGTDLSGVEGSRFACEYVEEDGSIAPCFDPTVRPWYETAEDEDYDSE--TFLGPAIITDPFKGAIDDD--WLVALARAVYSNSGTTSGSLLGVVGMDVRLEEVQESVEAINFLDTGYSILATADEGVVLAA--GVWDEDASEEAPTVCDLGIGICSGRDGDGWTDLIADTENGEVKSFTSKSTDGVDEEWILVAAPVEGTFDTAISGGAGTVTHYILSAVPRNEIFETVVGMVDVIWDSTIQIIIPTAIVACCTLVAVALSVYFLAGSIVRPIVKMTKAARSITADGAETDVFGSVAADWGIKKDSARGVGGG-----RFLDYLLCRGDDEISTLGREFQLMITGLGKRGLAAEAIGLMEERAGYPMNPFTS 575          
BLAST of mRNA_H-elongata_contig7244.14911.1 vs. uniprot
Match: A0A6H5KHM8_9PHAE (HAMP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHM8_9PHAE)

HSP 1 Score: 366 bits (939), Expect = 9.330e-110
Identity = 244/526 (46.39%), Postives = 300/526 (57.03%), Query Frame = 1
Query:    7 QDLILDGGGLGYPLSPAHEDLRDTDLEDD-------------DIDYTRSVWYYADDTSADAVVEDEDDLTTISNTARLDLLWPTMYFNSNDTNAVYAAVPLKTDDDMVFRLFPGRALSSDAGTLFGCSDPDESG----CYDATKRPWYEA--------AIAENVEREGSTGLGKAILSAP---------------YTDAIDPESTWLVTLARAVYADDDS---LLGVVGVDVKLEQMQLSIEGLSFLTSGYSILATADNGTVLAAPDGIWDRDAEDESSNLCSLDSGICSESDW-DELTSAEQGEVFRFRDDGGDG--EEHILVITPVNATFELDL--GVGSTTHYILSAVPVSEIFEPVEGMADLIQTSTAQIMATTGFVAVATLAAVAIAVCVLAGNITRPIKKMTEAAQSIARDGAKTNVFGGVAADWKAGRDGGSSSGDGFP-----------RRTRAIDYMLCRGEDEIDTLVREFSLMITGLGRRGQASTAIGL-EETSVYPKNPFTTSF-ERAPPTAPS 1401
            QDL+LD G  GYPL+ AH DLRDT++                ++D +RS WYYAD   ++ V   ED++TTI+ TARLDLLWPT+Y NS DT  VY  V L T    + R FPG  LS   G+ F C   +E G    C+D T RPWY          AI  N+  +G     K  L+AP               YT A   E  +   + +     D +   LLGVVG+DV+LEQ+Q S+EG++FL +GYSILATAD G VLAA  G+WDRD  +++        G     +W D L   E G + RF      G  EE ILV  PV   F      G G+ THYILSAVP +EIFEPV GMADLI+ ST QI+ TT  VA  T+ AVA++V  LAG+ITRPI KMT AA+SIA DGAKT+VFG V A W A RD    S  G              RT  +DY+LCRG+DEI TL REF LMITGLGRRG A+ A GL ++ + YPKNP+     +R PPT PS
Sbjct:   88 QDLVLDSGNEGYPLNLAHTDLRDTEIATSAEANLQNFSRMSFEVDLSRSTWYYAD-AESNTVEVPEDEMTTITQTARLDLLWPTVYINSYDTKGVYVGVELSTTGRTI-RYFPGTDLSGVEGSRFACEYVEEDGSIAPCFDPTVRPWYAVESGLKGPKAIYANLAVDGGVNK-KTALTAPRRIAPINCENFEKPVYTQASSKEQGFEADVHKFSNDSDSTRGNLLGVVGMDVRLEQVQESVEGINFLNTGYSILATAD-GIVLAA--GVWDRDGTEKAPEGKGRTLGDSDGDEWVDLLAEIENGGIKRFTSTSTAGVDEEWILVAAPVEGNFATATSGGAGTVTHYILSAVPRNEIFEPVVGMADLIRDSTVQIIVTTAIVACFTMVAVALSVYFLAGSITRPIVKMTSAARSIAADGAKTDVFGSVTATWGARRDSARDSARGCGTDISTPGRFTVNRTACLDYLLCRGDDEISTLGREFQLMITGLGRRGSAAEATGLMDKRTGYPKNPYAAMIVKRPPPTGPS 607          
BLAST of mRNA_H-elongata_contig7244.14911.1 vs. uniprot
Match: A0A6H5JHX1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHX1_9PHAE)

HSP 1 Score: 299 bits (766), Expect = 8.610e-87
Identity = 207/452 (45.80%), Postives = 259/452 (57.30%), Query Frame = 1
Query:  124 YADDTSADAVVEDEDDLTTISNTARLDLLWPTMYFNSNDTNAVYAAVPLKTDDDMVFRLFPGRALSSDAGTLFGCSDPDESG----CYDATKRPW---YEAAIAENVEREGSTGLGKAILSAPYTDAIDPESTWLVTLARAVYADDDSLLGVVGVDVKLEQMQLSIEGLSFLTSGYSILATADNGTVLAAPDGIWDRDAEDESSNLCSLDSGICSESD---WDELTS-AEQGEVFRFRDDGGDGE-EHILVITPVNATFELDL--GVGSTTHYILSAVPVSEIFEPVEGMADLIQTST----------------AQIMATTGFVAVATLAAVAIAVCVLAGNITRPIKKMTEAAQSIARDGAKTNVFGGVAADWKAGRDGGSSSGDGFPRRTRAIDYMLCRGEDEIDTLVREFSLMITGLGRRGQASTAIG-LEETSVYPKNPFTTSFERAP 1386
            Y  D  ++ V   ED++  I+ TARLDLLWP +Y  S +T   Y  V L T     +R FPG  LS   G+ F C   +  G    C+D T  PW   YE A  E+ + +  T L  AI++ P+  +ID +  WLV LARAVY    SLLGVVG+DV+L Q+Q S+E ++FL +GYSILATAD G VLAA +  WD DA  E+  +C L  GI S  D   W +L +  E GEV  F         E ILV  PV  TF+  +  G G+  HYILSAVP +EIFEPV GM  LI  ST                 QI+  T  VA  TL AVA+AV  LAG+ITRPI KMT+AA+S   DGA+ +VFG VAAD    +D    +G       R +DY+LCRG+DEI TL REF LMITGLG+RG A+ AIG +EE + YP         R+P
Sbjct:    8 YNADAESNTVEVPEDEMAAITQTARLDLLWPAVYITSYETKGAYVGVELSTTG-RTYRYFPGTDLSGVKGSRFACEYVEVDGSIAPCFDPTVPPWERWYETA--EDPDYDSETFLAPAIITDPFKGSIDDD--WLVALARAVY----SLLGVVGMDVRLGQLQESVEAINFLDTGYSILATADEGVVLAAAE--WDEDASQEALTVCDLRIGISSGRDGDGWTDLKADTENGEVKSFTSSPPTASTEWILVAAPVEGTFDTAISGGAGTVAHYILSAVPRNEIFEPVVGMMGLIWDSTIQEFHVHLLSLFSSLHVQIIIPTAIVACCTLVAVALAVYFLAGSITRPIVKMTKAARSTTADGAEHDVFGSVAADRGIKKDSVRGAGG-----ARFLDYLLCRGDDEISTLGREFQLMITGLGKRGSAAEAIGVMEEHTGYPITLLPRGRRRSP 443          
BLAST of mRNA_H-elongata_contig7244.14911.1 vs. uniprot
Match: A0A524NTS9_9ARCH (HAMP domain-containing protein (Fragment) n=1 Tax=Candidatus Lokiarchaeota archaeon TaxID=2053489 RepID=A0A524NTS9_9ARCH)

HSP 1 Score: 72.0 bits (175), Expect = 1.290e-9
Identity = 81/309 (26.21%), Postives = 131/309 (42.39%), Query Frame = 1
Query:  373 YDATKRPWYEAAIAENVEREGSTGLGKAI--LSAPYTDAIDPESTWLVTLARAVYADDDSLLGVVGVDVKLEQMQLSIEGLSFLTSGYSILATADNGTVLAAPDGIWDRDAEDESSNLCSLDSGICSESDWDELTSAEQGEVFRFRDDGGDGEEHILVITPVNATFELDLGVGSTTHYILSAVPVSEIFEPVEGMADLIQTSTAQIMATTGFVAVATLAAVAIAVCVLAGNITRPIKKMTEAAQSIARDGAKTNVFGGVAADWKAGRDGGSSSGDGFPRRTRAIDYMLCRGEDEIDTLVREFSLMITGL 1293
            YD   RPWY+            TGL  +   ++ PY DA       ++T+A+ V+     L+GV+   + ++++Q SI  +S L +GY+ +   D G  +A  D +     ED  + +  L++   S    DE+T    G     ++ GG  E + L  + +          G T   ++  VP  E  + V  + + IQ   A+   T   V V   A       +LAG IT+P+K +T+A Q + +  A T +   V +D                 +   ID  L   +DEI  L R F  MIT +
Sbjct:   51 YDPRARPWYDF-----------TGLATSDVKITNPYVDANG--LGLMITVAKQVFTTTGDLIGVIAAALTIDKIQESILNVSILDTGYAFMINND-GLAIAHSDLVEPDQGEDLITQISVLENIPASV--LDEITGGGSGYSIFEKEVGGAMESYYLAYSSI----------GETDFIVVVVVPEDEALQSVSQLEENIQVVNARNTLTLIIVIVVASALSVGLGTILAGQITKPVKALTDAVQRLTKQDAITAI---VQSD-----------------KDVLIDPALESQDDEIGDLTRAFKNMITSI 313          
BLAST of mRNA_H-elongata_contig7244.14911.1 vs. uniprot
Match: A0A7C7RYC4_9CHLR (HAMP domain-containing protein (Fragment) n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A7C7RYC4_9CHLR)

HSP 1 Score: 63.5 bits (153), Expect = 1.580e-6
Identity = 59/179 (32.96%), Postives = 83/179 (46.37%), Query Frame = 1
Query:  145 DAVVEDEDDLTTISNTARLDLLWPTMYFNSNDTNAVYAAVPLKTDDDMVFRLFPGRALSSDAGTLFGCSDPDESGCYDATKRPWYE-AAIAENVEREGSTGLGKAILSAPYTDAIDPESTWLVTLARAVYADDDSLLGVVGVDVKLEQMQLSIEGLSFLTSGYSILATADNGTVLAAPD 678
            D V  DE+ L  +  +A ++L+ P +Y +  +T AVY A   +     V   +P   L +          PD    +  T+RPWY  AA A N ER       + + S  Y DA       +VT A  VY D    +GVVG+DV L+ +  SIE    L SGYS L   + G  +A P+
Sbjct:  140 DFVEIDEELLEVLEMSAHMNLILPPVYDSDPNTVAVYLAAKQE-----VTCYYPNINLGA-------IVPPD----FQVTQRPWYVGAAPANNPER-------RVVWSPVYADATG--KGLMVTAAAPVYTDRGEFVGVVGIDVTLQDISASIEENRLLGSGYSFLVD-EAGRAIALPE 292          
BLAST of mRNA_H-elongata_contig7244.14911.1 vs. uniprot
Match: A0A7C9L3L7_9FIRM (Methyl-accepting chemotaxis protein n=2 Tax=Firmicutes TaxID=1239 RepID=A0A7C9L3L7_9FIRM)

HSP 1 Score: 63.9 bits (154), Expect = 1.640e-6
Identity = 46/137 (33.58%), Postives = 71/137 (51.82%), Query Frame = 1
Query:  271 KTDDDMVFRLFPGRALSSDAGT-LFGCSDPDESGCYDATKRPWYEAAIAENVEREGSTGLGKAILSAPYTDAIDPESTWLVTLARAVYADDDSLLGVVGVDVKLEQMQLSIEGLSFLTSGYSILATADNGTVLAAPD 678
            ++DDD+    F     ++D G  L+  +D DE   +D   RPWY++AI            GK I + PYTDA       +VT AR V  D   ++GV+GVD++L ++  ++   +    GY + AT  NGT++A  D
Sbjct:  140 ESDDDIKSAYF----ATTDGGIYLYPEADLDEG--FDPRVRPWYQSAIENR---------GKVIWTKPYTDADGDNKRTVVTAARTV-EDKGEIIGVIGVDIQLNELSKALGSSTIGRKGY-VCATDKNGTMIAHND 259          
BLAST of mRNA_H-elongata_contig7244.14911.1 vs. uniprot
Match: A0A1G9I8I5_9CLOT (HDIG domain-containing protein n=1 Tax=Natronincola ferrireducens TaxID=393762 RepID=A0A1G9I8I5_9CLOT)

HSP 1 Score: 63.5 bits (153), Expect = 1.970e-6
Identity = 44/121 (36.36%), Postives = 62/121 (51.24%), Query Frame = 1
Query:  316 LSSDAGTLFGCSDPDESGCYDATKRPWYEAAIAENVEREGSTGLGKAILSAPYTDAIDPESTWLVTLARAVYADDDSLLGVVGVDVKLEQMQLSIEGLSFLTSGYSILATADNGTVLAAPD 678
            +  D   L    DP     YDA +R WY  A+            G+ I + PY DA D  +  +VT+ARAV  D+  ++GV+GVD+KLE+    I+ L F   GY +L + D G + A PD
Sbjct:  120 VEEDGSLLLSPLDPTMPQNYDARERDWYIDAV---------NNPGETIWTEPYLDAGDSGAV-VVTVARAVIRDEQ-IVGVIGVDIKLEKFSEIIKSLVFGEEGYLMLISND-GDIYAHPD 228          
BLAST of mRNA_H-elongata_contig7244.14911.1 vs. uniprot
Match: D3T6Z4_THEIA (Methyl-accepting chemotaxis sensory transducer with Cache sensor n=4 Tax=Thermoanaerobacter TaxID=1754 RepID=D3T6Z4_THEIA)

HSP 1 Score: 61.2 bits (147), Expect = 1.070e-5
Identity = 37/102 (36.27%), Postives = 57/102 (55.88%), Query Frame = 1
Query:  373 YDATKRPWYEAAIAENVEREGSTGLGKAILSAPYTDAIDPESTWLVTLARAVYADDDSLLGVVGVDVKLEQMQLSIEGLSFLTSGYSILATADNGTVLAAPD 678
            YD T+RPWY+ A     E+ G +     + + PY D        ++T+A+AV   D  LLGV+G+D+ LEQ+  ++  +    SGY  + T D GTV++ PD
Sbjct:  125 YDPTERPWYKDA-----EKAGES----IVWTDPYQDF--GTKVPMITIAKAVRNSDGKLLGVLGIDISLEQLSKNLSSIKIGDSGYIYIITKD-GTVISHPD 214          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig7244.14911.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
A0A6H5KHM1_9PHAE9.020e-13951.98HAMP domain-containing protein n=2 Tax=Ectocarpus ... [more]
D8LT17_ECTSI6.860e-13452.27Methyl-accepting chemotaxis protein n=1 Tax=Ectoca... [more]
D8LT16_ECTSI1.070e-12551.65HAMP domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5KHM8_9PHAE9.330e-11046.39HAMP domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5JHX1_9PHAE8.610e-8745.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A524NTS9_9ARCH1.290e-926.21HAMP domain-containing protein (Fragment) n=1 Tax=... [more]
A0A7C7RYC4_9CHLR1.580e-632.96HAMP domain-containing protein (Fragment) n=1 Tax=... [more]
A0A7C9L3L7_9FIRM1.640e-633.58Methyl-accepting chemotaxis protein n=2 Tax=Firmic... [more]
A0A1G9I8I5_9CLOT1.970e-636.36HDIG domain-containing protein n=1 Tax=Natronincol... [more]
D3T6Z4_THEIA1.070e-536.27Methyl-accepting chemotaxis sensory transducer wit... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig7244contigH-elongata_contig7244:6032..9751 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score65.5
Seed ortholog evalue6.6e-08
Seed eggNOG ortholog273068.TTE2231
KEGG koko:K03406
KEGG Pathwayko02020,ko02030,map02020,map02030
EggNOG free text desc.histidine kinase HAMP region domain protein
EggNOG OGs1TP5A@1239,247S3@186801,42FW1@68295,COG0840@1,COG0840@2
COG Functional cat.NT
Best tax levelThermoanaerobacterales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko02035
Hectar predicted targeting categoryother localisation
Exons2
Model size3469
Cds size1197
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig7244.14911.1prot_H-elongata_contig7244.14911.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig7244 6502..7698 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931125.8572483-UTR-H-elongata_contig7244:6031..61501622931125.8572483-UTR-H-elongata_contig7244:6031..6150Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig7244 6032..6150 +
1691679708.6049452-UTR-H-elongata_contig7244:6031..61501691679708.6049452-UTR-H-elongata_contig7244:6031..6150Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig7244 6032..6150 +
1622931125.8803363-UTR-H-elongata_contig7244:6401..65011622931125.8803363-UTR-H-elongata_contig7244:6401..6501Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig7244 6402..6501 +
1691679708.6160316-UTR-H-elongata_contig7244:6401..65011691679708.6160316-UTR-H-elongata_contig7244:6401..6501Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig7244 6402..6501 +
1622931125.9099057-UTR-H-elongata_contig7244:7698..97511622931125.9099057-UTR-H-elongata_contig7244:7698..9751Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig7244 7699..9751 +
1691679708.637362-UTR-H-elongata_contig7244:7698..97511691679708.637362-UTR-H-elongata_contig7244:7698..9751Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig7244 7699..9751 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931125.8969693-CDS-H-elongata_contig7244:6501..76981622931125.8969693-CDS-H-elongata_contig7244:6501..7698Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7244 6502..7698 +
1691679708.6260653-CDS-H-elongata_contig7244:6501..76981691679708.6260653-CDS-H-elongata_contig7244:6501..7698Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7244 6502..7698 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig7244.14911.1

>prot_H-elongata_contig7244.14911.1 ID=prot_H-elongata_contig7244.14911.1|Name=mRNA_H-elongata_contig7244.14911.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=399bp
MYFNSNDTNAVYAAVPLKTDDDMVFRLFPGRALSSDAGTLFGCSDPDESG
CYDATKRPWYEAAIAENVEREGSTGLGKAILSAPYTDAIDPESTWLVTLA
RAVYADDDSLLGVVGVDVKLEQMQLSIEGLSFLTSGYSILATADNGTVLA
APDGIWDRDAEDESSNLCSLDSGICSESDWDELTSAEQGEVFRFRDDGGD
GEEHILVITPVNATFELDLGVGSTTHYILSAVPVSEIFEPVEGMADLIQT
STAQIMATTGFVAVATLAAVAIAVCVLAGNITRPIKKMTEAAQSIARDGA
KTNVFGGVAADWKAGRDGGSSSGDGFPRRTRAIDYMLCRGEDEIDTLVRE
FSLMITGLGRRGQASTAIGLEETSVYPKNPFTTSFERAPPTAPSEIPS*
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mRNA from alignment at H-elongata_contig7244:6032..9751+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig7244.14911.1 ID=mRNA_H-elongata_contig7244.14911.1|Name=mRNA_H-elongata_contig7244.14911.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3720bp|location=Sequence derived from alignment at H-elongata_contig7244:6032..9751+ (Himanthalia elongata Himel1 dioecious)
CTGTGGCAGGACTTGATCCTGGACGGCGGGGGGCTAGGATACCCATTGTC TCCCGCCCACGAAGACCTCCGCGATACGGACCTCGAGGATGATGACATCG ACTACACCCGCAGCGTCTGGTGAGTGAACGGGGCACATGTATATAGGCCG TGTGATATTCGGCGTCGGGCGGCGCATGGGAAATATATAAGTGGTTCGGA TGGGTAATAGGAGGTCGCCCGCTGGTGGGAATTTGTCCGACACACACACA CACACACACACACACACACACACACACACACACACACATCGTTCCCTTAG TCCATTATTTTACACCACGGCTTGCTTTCATCCCTTTACCTTCACCTCCC TCCCTACTCCTCCATTTTAGGTACTACGCGGATGACACCTCCGCGGACGC CGTGGTCGAAGATGAAGATGATTTGACGACGATCTCGAACACCGCTCGGC TTGATCTGCTGTGGCCCACCATGTACTTCAACTCGAACGACACCAACGCA GTGTACGCGGCGGTGCCTCTCAAGACGGACGACGACATGGTCTTCCGGCT GTTCCCCGGAAGGGCCTTGAGCTCCGATGCGGGAACCCTGTTCGGGTGCA GCGACCCAGACGAGAGCGGGTGCTACGATGCCACAAAACGGCCTTGGTAC GAAGCAGCCATAGCCGAAAATGTCGAACGGGAAGGTTCCACGGGTCTTGG GAAAGCGATCCTTTCCGCCCCCTACACTGACGCCATCGACCCCGAGTCGA CTTGGCTAGTCACTCTGGCGCGCGCGGTGTACGCCGACGATGACTCGCTG CTCGGCGTAGTCGGCGTGGACGTGAAGTTAGAGCAGATGCAGCTCTCGAT CGAGGGGCTCAGCTTCCTGACTAGCGGGTACTCAATCCTTGCCACCGCCG ACAACGGGACGGTGCTCGCGGCGCCGGACGGCATTTGGGACAGAGATGCA GAAGATGAGAGTAGCAATTTGTGTAGCCTGGACAGCGGTATTTGCAGCGA GAGCGATTGGGATGAGCTCACCTCGGCCGAGCAGGGCGAAGTCTTCAGGT TCCGGGACGACGGCGGAGACGGGGAGGAGCACATTCTGGTGATTACGCCC GTGAATGCGACCTTCGAGCTCGATTTGGGCGTGGGTTCCACGACACACTA TATCCTGAGCGCCGTGCCCGTCTCGGAGATATTCGAGCCCGTCGAGGGCA TGGCAGACCTGATCCAGACGAGCACCGCCCAGATCATGGCCACGACCGGG TTCGTCGCCGTGGCGACCCTGGCCGCGGTGGCCATCGCCGTCTGCGTCTT AGCCGGGAACATCACGCGTCCCATCAAGAAGATGACAGAGGCCGCTCAGA GCATCGCCAGGGACGGCGCGAAGACTAACGTGTTCGGAGGCGTCGCGGCA GACTGGAAGGCCGGAAGGGACGGTGGAAGCAGCTCCGGGGACGGCTTCCC CCGGCGGACGCGCGCCATCGACTACATGCTGTGCAGGGGGGAGGACGAGA TCGACACCCTCGTCCGTGAGTTCTCGCTCATGATCACGGGTCTCGGGAGG CGGGGGCAGGCATCCACGGCGATCGGCCTCGAGGAGACTTCGGTGTACCC CAAAAATCCCTTCACGACCTCGTTCGAGAGGGCACCGCCCACGGCGCCCT CTGAGATTCCCTCATGATGCAGCAAAATGAGAATGGAGGGGGAAGAGTAG TCTCACGCTCCCTTTGAAGCACCAATTCCCGACCCGATCCGATCCGCATG CCCCAGCCTTCTTGTTAGCCATTGTCAATATATATTGATACGAACCACCC GTACAACCTGATAGCAGGTTTGTGAAAAGCAGTGGACAAAGTATGTAGTT CCGTTTTTTATTGAACAGTCTAACATGTCGCATTGTGCGATGTCTCAATG TCTCACTCCGACAGAACACATTTTGTTATTATTAGCGCGTGTGATACTCT CGTGCGTATGTACCATGCCTGCGGGAGAGAGTGATACCCTTGTAGGATAA ATCAAGTCGCCATCCAGGCAGGTTTCGAGGAGGGCGTGTTCGAGGAGGGT GTGAAAATTGAGCTAATAATATCATCAGCAGGACTTTCCCCCATTACAGT ATTATTATTTTTGCTGTTATTTATTTATTTATTTATTTTTATTTTATTGT TATTTTTCCCCCTCTCAACTCCATCCAATGCGTCTCGAGAATCGGAATGA ATTGCCATGGATTTGGTCATGAATGGCGATGAAGGTCTACTTCGGGAAAT CTGCAGCCCAGCAGCAGCCCCGCTAGACCGCAGATCGTGCAGAGGCGTTT TTTGTGTCGTTATTTTGTTGACGTACATATCATCTTCATTCTGCGTACCC TGTAGCTTGTTTGCTTCTCCTTCATGTGGGGCGAGGGGTGCCATACCATA CTGGGGGTATCCCGCGAAAATATCGTTTCGGTGGAAAGTGGTTGGCTTCT TGGGTAAAGTTGGTGTAGTGCTCGAGTACCCCTTGCCCCTTCCCCCACGA CAATGACTATGATAACTCTCGGAAATTATATTAAAGGCTACGGTAGAGGT AGGTTAAAGGAAAGCAAGCACCCGCCGGCGATCGATTATCTTTCGTCATC GAGGACCTAGCTCTCTGCTTTGTGTCATAATATGCATGTCCGGCCAGCAT GATTAATGGCGTCGTTAGCTCACCAAGCGGAGCATGGCCACCTTCGCGAA AGAAGGCAATCGAATCGTGTCGCGTGTCTTTGGAGCGAGCGGGGTGTCAT GCTTCCTGCACCGGACTCGTCTGGTCGATGAGGTCGCACACCAAAACTCA TAATGGGTGATATGTAATATGTGCAATTGATGCGACGCCGCAACTGACTC GCCAGCTGGTTACGACCGCGCCAGCGTGAATGGTTAGGTTGCTTGAAACG TCTTTTTTGTTGTTGCTAGTTCCTTCCAGGTTAAGCTTTGGTTGTCAACC TGGACTATCTGCTGTGTACCGAGGTCAAGGCCACTCGCTTGCTGTATGGT GCTGGCATAGGTAGAAGTCGGGGCGGTTTTTATTAGGCTAAGCCTTAGCT TCCGCATAAATAATATGGAGGAGGAGCGATATATACTCGTGATGAATGCG CGGACTGATCTTGATTGTCACAAGGGGAAAAAATGAAGTGCGTTCAAGCT CGTAGCTAGTACTCGCTCGGTTCCCATGGCTGTTCCGTAGGTACAGTACA AGACTAGTGAGCTATAACCTGCCGGCTTGGTTTTCTCCCAGGATCACCCT TGTTGGTGTAACCATCCACTAAACAATCTGGGCAGTTCTCAAACCCTTCA CATCGTTATAACAGCAGTGCTATTGCTTACCCAAGGAGGCTCCGCATCAT CAGTCCCCGAACCATTGCTTGGTTCACCGGCCACTTGTGACCACTACTAC TGTACGTCAGCACTTGTGACCACTTGTACACGATTTGCCACTGAATATCG GTTACAGAAAACCCAATTGTGTCCACTCTCAAATAATATTGTTTAGAACA AACCGTACTGTTTTTTTTGGTGATGGTAGCTATAATAGTGTAATGTTCAC ACTAACCATACCATACCATACCAATTACTATTACTATAATACGCGTTTGT CAATCAATACGGTCAGTTTGTGGTTTTAGAGAGATAGGAAGGTCTCTTGG CGATGTCACTGTACCCGCTACTATAATATCCGAAATCGTCACAAAACTCA TCGCCACTCGTCACTCGTCA
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Coding sequence (CDS) from alignment at H-elongata_contig7244:6032..9751+

>mRNA_H-elongata_contig7244.14911.1 ID=mRNA_H-elongata_contig7244.14911.1|Name=mRNA_H-elongata_contig7244.14911.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2394bp|location=Sequence derived from alignment at H-elongata_contig7244:6032..9751+ (Himanthalia elongata Himel1 dioecious)
ATGTACTTCAACTCGAACGACACCAACGCAGTGTACGCGGCGGTGCCTCT
CAAGACGGACGACGACATGGTCTTCCGGCTGTTCCCCGGAAGGGCCTTGA
GCTCCGATGCGGGAACCCTGTTCGGGTGCAGCGACCCAGACGAGAGCGGG
TGCTACGATGCCACAAAACGGCCTTGGTACGAAGCAGCCATAGCCGAAAA
TGTCGAACGGGAAGGTTCCACGGGTCTTGGGAAAGCGATCCTTTCCGCCC
CCTACACTGACGCCATCGACCCCGAGTCGACTTGGCTAGTCACTCTGGCG
CGCGCGGTGTACGCCGACGATGACTCGCTGCTCGGCGTAGTCGGCGTGGA
CGTGAAGTTAGAGCAGATGCAGCTCTCGATCGAGGGGCTCAGCTTCCTGA
CTAGCGGGTACTCAATCCTTGCCACCGCCGACAACGGGACGGTGCTCGCG
GCGCCGGACGGCATTTGGGACAGAGATGCAGAAGATGAGAGTAGCAATTT
GTGTAGCCTGGACAGCGGTATTTGCAGCGAGAGCGATTGGGATGAGCTCA
CCTCGGCCGAGCAGGGCGAAGTCTTCAGGTTCCGGGACGACGGCGGAGAC
GGGGAGGAGCACATTCTGGTGATTACGCCCGTGAATGCGACCTTCGAGCT
CGATTTGGGCGTGGGTTCCACGACACACTATATCCTGAGCGCCGTGCCCG
TCTCGGAGATATTCGAGCCCGTCGAGGGCATGGCAGACCTGATCCAGACG
AGCACCGCCCAGATCATGGCCACGACCGGGTTCGTCGCCGTGGCGACCCT
GGCCGCGGTGGCCATCGCCGTCTGCGTCTTAGCCGGGAACATCACGCGTC
CCATCAAGAAGATGACAGAGGCCGCTCAGAGCATCGCCAGGGACGGCGCG
AAGACTAACGTGTTCGGAGGCGTCGCGGCAGACTGGAAGGCCGGAAGGGA
CGGTGGAAGCAGCTCCGGGGACGGCTTCCCCCGGCGGACGCGCGCCATCG
ACTACATGCTGTGCAGGGGGGAGGACGAGATCGACACCCTCGTCCGTGAG
TTCTCGCTCATGATCACGGGTCTCGGGAGGCGGGGGCAGGCATCCACGGC
GATCGGCCTCGAGGAGACTTCGGTGTACCCCAAAAATCCCTTCACGACCT
CGTTCGAGAGGGCACCGCCCACGGCGCCCTCTGAGATTCCCTCATGAATG
TACTTCAACTCGAACGACACCAACGCAGTGTACGCGGCGGTGCCTCTCAA
GACGGACGACGACATGGTCTTCCGGCTGTTCCCCGGAAGGGCCTTGAGCT
CCGATGCGGGAACCCTGTTCGGGTGCAGCGACCCAGACGAGAGCGGGTGC
TACGATGCCACAAAACGGCCTTGGTACGAAGCAGCCATAGCCGAAAATGT
CGAACGGGAAGGTTCCACGGGTCTTGGGAAAGCGATCCTTTCCGCCCCCT
ACACTGACGCCATCGACCCCGAGTCGACTTGGCTAGTCACTCTGGCGCGC
GCGGTGTACGCCGACGATGACTCGCTGCTCGGCGTAGTCGGCGTGGACGT
GAAGTTAGAGCAGATGCAGCTCTCGATCGAGGGGCTCAGCTTCCTGACTA
GCGGGTACTCAATCCTTGCCACCGCCGACAACGGGACGGTGCTCGCGGCG
CCGGACGGCATTTGGGACAGAGATGCAGAAGATGAGAGTAGCAATTTGTG
TAGCCTGGACAGCGGTATTTGCAGCGAGAGCGATTGGGATGAGCTCACCT
CGGCCGAGCAGGGCGAAGTCTTCAGGTTCCGGGACGACGGCGGAGACGGG
GAGGAGCACATTCTGGTGATTACGCCCGTGAATGCGACCTTCGAGCTCGA
TTTGGGCGTGGGTTCCACGACACACTATATCCTGAGCGCCGTGCCCGTCT
CGGAGATATTCGAGCCCGTCGAGGGCATGGCAGACCTGATCCAGACGAGC
ACCGCCCAGATCATGGCCACGACCGGGTTCGTCGCCGTGGCGACCCTGGC
CGCGGTGGCCATCGCCGTCTGCGTCTTAGCCGGGAACATCACGCGTCCCA
TCAAGAAGATGACAGAGGCCGCTCAGAGCATCGCCAGGGACGGCGCGAAG
ACTAACGTGTTCGGAGGCGTCGCGGCAGACTGGAAGGCCGGAAGGGACGG
TGGAAGCAGCTCCGGGGACGGCTTCCCCCGGCGGACGCGCGCCATCGACT
ACATGCTGTGCAGGGGGGAGGACGAGATCGACACCCTCGTCCGTGAGTTC
TCGCTCATGATCACGGGTCTCGGGAGGCGGGGGCAGGCATCCACGGCGAT
CGGCCTCGAGGAGACTTCGGTGTACCCCAAAAATCCCTTCACGACCTCGT
TCGAGAGGGCACCGCCCACGGCGCCCTCTGAGATTCCCTCATGA
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