mRNA_H-elongata_contig72269.14899.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig72269.14899.1 vs. uniprot
Match: D8LJD6_ECTSI (Ribosomal protein L11 methyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJD6_ECTSI) HSP 1 Score: 167 bits (423), Expect = 6.310e-48 Identity = 79/104 (75.96%), Postives = 85/104 (81.73%), Query Frame = 1
Query: 1 QEGWDPIEVGRLRIRFPWHEALPSSQANPSQVELELEGGASFGTGEHPTTSLCLEWLDENSPDQRVLDYGSGSGILSLAALKFGAREAIGVEIDPGAILSAASN 312
QEGWDPIEVGRLRIRFPWH LP S+ P QVELELEGG SFGTGEHPTTS+C WL++N QRVLDYGSGSGIL LAAL FGA EA+GVE+D AI SAA N
Sbjct: 212 QEGWDPIEVGRLRIRFPWHTPLPPSELKPGQVELELEGGRSFGTGEHPTTSMCCTWLEDNVAGQRVLDYGSGSGILGLAALSFGAVEAVGVELDLSAIASAAVN 315
BLAST of mRNA_H-elongata_contig72269.14899.1 vs. uniprot
Match: A0A835Z7L3_9STRA (Ribosomal protein L11 methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7L3_9STRA) HSP 1 Score: 139 bits (350), Expect = 1.900e-37 Identity = 67/107 (62.62%), Postives = 79/107 (73.83%), Query Frame = 1
Query: 1 QEGWDPIEVGRLRIRFPWHEALPSSQANPSQVELELEGGASFGTGEHPTTSLCLEWLD---ENSPDQRVLDYGSGSGILSLAALKFGAREAIGVEIDPGAILSAASN 312
Q+ W PI +G LRIRFPWH+AL A QVEL LEGG +FGTGEHPTT +C WL+ + SP RVLDYGSGSG+L LAALK+GA EAIG+E+D AILS+ N
Sbjct: 186 QQTWHPITLGNLRIRFPWHDALNEDSAGTGQVELCLEGGRAFGTGEHPTTRMCCTWLERCLQVSPGARVLDYGSGSGLLGLAALKYGASEAIGIEVDVDAILSSLYN 292
BLAST of mRNA_H-elongata_contig72269.14899.1 vs. uniprot
Match: A0A7S1HNT9_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1HNT9_HEMAN) HSP 1 Score: 115 bits (287), Expect = 2.750e-29 Identity = 62/111 (55.86%), Postives = 75/111 (67.57%), Query Frame = 1
Query: 1 QEGWDPIEVGRLRIRFPWH--EALPSSQAN----PSQVELELEGGASFGTGEHPTTSLCLEWLDENSPDQ-RVLDYGSGSGILSLAALKFGAREAIGVEIDPGAILSAASN 312
Q W PI VG L ++FPWH E L + +A S EL LEGG +FGTGEH TT LC WL D RVLDYG+GSGIL +AAL FGA+EAIGV+ID ++++AASN
Sbjct: 134 QRNWPPILVGSLLLKFPWHSREELDALRAEMGVGESVPELLLEGGMAFGTGEHATTQLCCNWLQHKVGDGVRVLDYGAGSGILGMAALLFGAKEAIGVDIDRDSLVAAASN 244
BLAST of mRNA_H-elongata_contig72269.14899.1 vs. uniprot
Match: A0A0G4ERA4_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4ERA4_VITBC) HSP 1 Score: 114 bits (285), Expect = 6.970e-28 Identity = 55/113 (48.67%), Postives = 72/113 (63.72%), Query Frame = 1
Query: 1 QEGWDPIEVGRLRIRFPWHEALPSSQANPSQVELELEGGASFGTGEHPTTSLCLEWLD-------ENSPDQ--RVLDYGSGSGILSLAALKFGAREAIGVEIDPGAILSAASN 312
Q+ W PI +G L IRFPWHE+ L LEGG +FGTG+HPTT LC W+ E++P + VLDYGSGSG+L+LAA+ FGA A+G+EIDP ++ S+ N
Sbjct: 181 QQEWPPIHIGNLTIRFPWHESDTDRGEGDGVKTLVLEGGPAFGTGDHPTTRLCCLWMQKVLREMKEDAPSEPINVLDYGSGSGVLTLAAVLFGASHAVGIEIDPASLTSSRRN 293
BLAST of mRNA_H-elongata_contig72269.14899.1 vs. uniprot
Match: UPI001BB8F8E2 (50S ribosomal protein L11 methyltransferase n=1 Tax=Sulfuritalea sp. TaxID=2480090 RepID=UPI001BB8F8E2) HSP 1 Score: 108 bits (270), Expect = 1.310e-26 Identity = 57/106 (53.77%), Postives = 74/106 (69.81%), Query Frame = 1
Query: 1 QEGWDPIEV-GRLRIRFPWHEALPSSQANPSQVELELEGGASFGTGEHPTTSLCLEWLDEN-SPDQRVLDYGSGSGILSLAALKFGAREAIGVEIDPGAILSAASN 312
Q +DPI + GRL I WH A +P V L L+ G +FGTG HPTT LCLEWL+ N +P + VLDYG GSGIL +AAL+ GA++A+GV+IDP A+ +AA+N
Sbjct: 105 QSQFDPIRISGRLWIVPSWHVA-----PDPRAVNLVLDPGLAFGTGSHPTTRLCLEWLEANVAPGRCVLDYGCGSGILGIAALRLGAQDALGVDIDPAALAAAAAN 205
BLAST of mRNA_H-elongata_contig72269.14899.1 vs. uniprot
Match: A0A1U9JNZ7_9NEIS (Ribosomal protein L11 methyltransferase n=2 Tax=Neisseriales TaxID=206351 RepID=A0A1U9JNZ7_9NEIS) HSP 1 Score: 107 bits (267), Expect = 3.700e-26 Identity = 56/106 (52.83%), Postives = 71/106 (66.98%), Query Frame = 1
Query: 1 QEGWDPIEVG-RLRIRFPWHEALPSSQANPSQVELELEGGASFGTGEHPTTSLCLEWLD-ENSPDQRVLDYGSGSGILSLAALKFGAREAIGVEIDPGAILSAASN 312
Q +DPI + RL I WH+A NP + L+L+ G +FGTG HPTT LCL+WLD E SP VLDYG GSGIL++AALK GA A+GV+IDP A+ ++ N
Sbjct: 105 QAQFDPIRISDRLWITPTWHDA-----PNPDAINLQLDPGLAFGTGSHPTTRLCLQWLDRELSPGASVLDYGCGSGILAIAALKLGAGRALGVDIDPQAVQASRDN 205
BLAST of mRNA_H-elongata_contig72269.14899.1 vs. uniprot
Match: UPI000F6132DC (50S ribosomal protein L11 methyltransferase n=1 Tax=Sulfuriferula thiophila TaxID=1781211 RepID=UPI000F6132DC) HSP 1 Score: 107 bits (266), Expect = 5.290e-26 Identity = 59/106 (55.66%), Postives = 73/106 (68.87%), Query Frame = 1
Query: 1 QEGWDPIEVG-RLRIRFPWHEALPSSQANPSQVELELEGGASFGTGEHPTTSLCLEWLDENSPDQR-VLDYGSGSGILSLAALKFGAREAIGVEIDPGAILSAASN 312
Q +DPI + RL I WH+A P QA + L+L+ G +FGTG HPTT LCL+WLDEN PD VLDYG GSGIL++AA KFGA + GV+IDP AI +A +N
Sbjct: 105 QAEFDPIRISKRLWIIPSWHQA-PDKQA----INLKLDPGLAFGTGSHPTTRLCLQWLDENLPDNATVLDYGCGSGILAIAAKKFGALKVWGVDIDPQAISTAINN 205
BLAST of mRNA_H-elongata_contig72269.14899.1 vs. uniprot
Match: UPI001EE98601 (50S ribosomal protein L11 methyltransferase n=1 Tax=Kingella sp. CICC 24913 TaxID=2916757 RepID=UPI001EE98601) HSP 1 Score: 106 bits (265), Expect = 7.430e-26 Identity = 55/106 (51.89%), Postives = 73/106 (68.87%), Query Frame = 1
Query: 1 QEGWDPIEVG-RLRIRFPWHEALPSSQANPSQVELELEGGASFGTGEHPTTSLCLEWLDEN-SPDQRVLDYGSGSGILSLAALKFGAREAIGVEIDPGAILSAASN 312
Q +DPI++ RL I WH++ +P + L L+ G +FGTG HPTT LCL WLD+N + +RVLDYG GSGIL++AALK GA EA GV+IDP A+ +A +N
Sbjct: 105 QSQFDPIQISPRLWITPTWHDS-----PDPEALNLRLDPGLAFGTGSHPTTRLCLRWLDQNLAGGERVLDYGCGSGILAIAALKLGAGEAAGVDIDPQAVKAARAN 205
BLAST of mRNA_H-elongata_contig72269.14899.1 vs. uniprot
Match: A0A809RU84_9PROT (Ribosomal protein L11 methyltransferase n=1 Tax=Sulfuriferula nivalis TaxID=2675298 RepID=A0A809RU84_9PROT) HSP 1 Score: 105 bits (263), Expect = 1.470e-25 Identity = 55/106 (51.89%), Postives = 75/106 (70.75%), Query Frame = 1
Query: 1 QEGWDPIEVG-RLRIRFPWHEALPSSQANPSQVELELEGGASFGTGEHPTTSLCLEWLDEN-SPDQRVLDYGSGSGILSLAALKFGAREAIGVEIDPGAILSAASN 312
Q +DPI++ RL I WH+A P S+A + L+L+ G +FGTG HPTT LCL+WLD+N + VLDYG GSGIL++A++KFGA A GV+IDP A+++A N
Sbjct: 105 QSEFDPIQISTRLWIIPSWHDA-PDSKA----INLKLDPGLAFGTGSHPTTRLCLQWLDQNIQGHESVLDYGCGSGILAIASIKFGASSATGVDIDPQAVITALDN 205
BLAST of mRNA_H-elongata_contig72269.14899.1 vs. uniprot
Match: E7RYE3_9BURK (Ribosomal protein L11 methyltransferase n=2 Tax=Lautropia TaxID=47670 RepID=E7RYE3_9BURK) HSP 1 Score: 106 bits (264), Expect = 1.610e-25 Identity = 58/106 (54.72%), Postives = 72/106 (67.92%), Query Frame = 1
Query: 1 QEGWDPIEVG-RLRIRFPWHEALPSSQANPSQVELELEGGASFGTGEHPTTSLCLEWLDENSP-DQRVLDYGSGSGILSLAALKFGAREAIGVEIDPGAILSAASN 312
Q +DPI VG RL I WH A +QA + L ++ G +FGTG HPTT LCLEWLDE+ P RV+DYG GSGIL++AA + GA E IG++IDP A+LS A N
Sbjct: 130 QAQFDPIPVGQRLLILPSWHAA--ETQAGDREA-LIIDPGLAFGTGSHPTTRLCLEWLDEHDPRGLRVIDYGCGSGILAIAAARLGAAEVIGIDIDPQAVLSTAEN 232 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig72269.14899.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig72269.14899.1 >prot_H-elongata_contig72269.14899.1 ID=prot_H-elongata_contig72269.14899.1|Name=mRNA_H-elongata_contig72269.14899.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=104bp QEGWDPIEVGRLRIRFPWHEALPSSQANPSQVELELEGGASFGTGEHPTTback to top mRNA from alignment at H-elongata_contig72269:454..2723- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig72269.14899.1 ID=mRNA_H-elongata_contig72269.14899.1|Name=mRNA_H-elongata_contig72269.14899.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2270bp|location=Sequence derived from alignment at H-elongata_contig72269:454..2723- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig72269:454..2723- >mRNA_H-elongata_contig72269.14899.1 ID=mRNA_H-elongata_contig72269.14899.1|Name=mRNA_H-elongata_contig72269.14899.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=624bp|location=Sequence derived from alignment at H-elongata_contig72269:454..2723- (Himanthalia elongata Himel1 dioecious)back to top |