mRNA_H-elongata_contig72268.14898.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig72268.14898.1 vs. uniprot
Match: D8LKL7_ECTSI (Alpha/beta hydrolase fold n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKL7_ECTSI) HSP 1 Score: 234 bits (596), Expect = 5.780e-74 Identity = 113/151 (74.83%), Postives = 129/151 (85.43%), Query Frame = 1
Query: 1 RWKQDAMTLIAKLLPHHYQKLVIVGGGVGGWIATLIGLELETKVTGFVGLAADPDFTHNLLLRYLPRNKMEEIDNEGKAIIQWGQASYPVTKKLIEDASDNLVLQGPVGGLPMHCPVRLIHGLDDEEVPYTVSLDLARRLASRNVNLYLVK 453
RWKQDA+TLI KLLP YQ+++IVGGGVGGWIATLI LE KV G VGLAADPDFT NLL+RYLP+ K++EI +G A I WG+ SYPV+K LIEDA DNLVL+GPVGGLP+ CPVRLIHGL+DEEVPYTVSLDL+RR+ S NVNLYLVK
Sbjct: 172 RWKQDAITLIDKLLPEAYQEVIIVGGGVGGWIATLIALERPEKVGGIVGLAADPDFTENLLMRYLPKAKIDEIYEKGVATIAWGERSYPVSKVLIEDAKDNLVLEGPVGGLPITCPVRLIHGLNDEEVPYTVSLDLSRRIQSSNVNLYLVK 322
BLAST of mRNA_H-elongata_contig72268.14898.1 vs. uniprot
Match: A0A836CDS8_9STRA (Alpha/Beta hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDS8_9STRA) HSP 1 Score: 155 bits (393), Expect = 7.460e-45 Identity = 77/151 (50.99%), Postives = 98/151 (64.90%), Query Frame = 1
Query: 1 RWKQDAMTLIAKLLPHHYQKLVIVGGGVGGWIATLIGLELETKVTGFVGLAADPDFTHNLLLRYLPRNKMEEIDNEGKAIIQWGQASYPVTKKLIEDASDNLVLQGPVGGLPMHCPVRLIHGLDDEEVPYTVSLDLARRLASRNVNLYLVK 453
RW D + LI L P K+V+VGGGVGGW+A L+ L+ V G VGL ADPDFT NLL ++LP EI +G + + WG YP+++ LIED +L+L GP GL + CPVRL+HGL DEEVP V L LARRL ++NV + L K
Sbjct: 51 RWTADTIKLIESLCPD--SKMVLVGGGVGGWVALLVALQRPDLVAGIVGLGADPDFTENLLWKHLPEETKTEIMEKGSSQVTWGIHQYPISRALIEDGRRHLLLGGPDNGLDIMCPVRLVHGLQDEEVPLDVPLSLARRLRTQNVQVLLQK 199
BLAST of mRNA_H-elongata_contig72268.14898.1 vs. uniprot
Match: A0A7S4E1S8_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E1S8_9STRA) HSP 1 Score: 150 bits (380), Expect = 5.590e-42 Identity = 75/152 (49.34%), Postives = 106/152 (69.74%), Query Frame = 1
Query: 1 RWKQDAMTLIAKLL-PHHYQKLVIVGGGVGGWIATLIGLELETKVTGFVGLAADPDFTHNLLLRYLPRNKMEEIDNEGKAIIQWGQASYPVTKKLIEDASDNLVLQGPVGGLPMHCPVRLIHGLDDEEVPYTVSLDLARRLASRNVNLYLVK 453
+W D LI + P+ ++++V+VG GVGGWIA + V G VGLAADPDFT +LLL+ L + +E I +G +I+WG SYP+++KLIEDA D+L+L+GP GGL + CPVRL+HGL+DEEVPYT ++ LA R+ + +V + L K
Sbjct: 131 KWLADTKQLIETVASPNDHRRVVLVGAGVGGWIAVRLAQTDPELVGGVVGLAADPDFTEDLLLKRLKPDVIERI-MDGMELIKWGDCSYPISRKLIEDARDHLLLKGPDGGLDVQCPVRLLHGLEDEEVPYTTAVRLANRIKTEDVTVSLSK 281
BLAST of mRNA_H-elongata_contig72268.14898.1 vs. uniprot
Match: F0YFN0_AURAN (Uncharacterized protein HDR3 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YFN0_AURAN) HSP 1 Score: 149 bits (376), Expect = 2.430e-41 Identity = 75/154 (48.70%), Postives = 107/154 (69.48%), Query Frame = 1
Query: 1 RWKQDAMTLIAKLL-PHHYQKLVIVGGGVGGWIATLIGLELETKVTGFVGLAADPDFTHNLLLRYLPRNKMEEI-DNEGKAIIQWGQASYPVTKKLIEDASDN-LVLQGPVGGLPMHCPVRLIHGLDDEEVPYTVSLDLARRLASRNVNLYLVK 453
+W D +TL+ + P ++++V+VG GVGGWIA L+ + V G VGLA+DPDFT LLL+ LP++ +++I ++G + WG +YP+TK LIEDA DN L+L GP LP+ CPVRL+HGL DEEVPY V++ LARR+ + +V + L K
Sbjct: 132 KWVDDTVTLLRTVANPEEHKRVVLVGAGVGGWIACLVAMRHPDLVGGVVGLASDPDFTEELLLKRLPQDVIDKIMGDDGMDQVHWGGKTYPITKALIEDAKDNHLLLDGPDRVLPIQCPVRLLHGLYDEEVPYDVAVRLARRIETEDVTISLSK 285
BLAST of mRNA_H-elongata_contig72268.14898.1 vs. uniprot
Match: A0A6S8DHT4_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A6S8DHT4_9STRA) HSP 1 Score: 147 bits (370), Expect = 3.440e-40 Identity = 70/146 (47.95%), Postives = 99/146 (67.81%), Query Frame = 1
Query: 1 RWKQDAMTLIAKLL-PHHYQKLVIVGGGVGGWIATLIGLELETKVTGFVGLAADPDFTHNLLLRYLPRNKMEEIDNEGKAIIQWGQASYPVTKKLIEDASDNLVLQGPVGGLPMHCPVRLIHGLDDEEVPYTVSLDLARRLASRNV 435
RW +D M L+ + P ++++V+ G GVGGWIA L+ ++ V G VGLAADPDFT +LLL+ LP+ ++ I ++WG YP+TK LIEDA ++L+LQGP GLP+ CPVRL+HG DEEVPY ++ LA R+ + +V
Sbjct: 160 RWLEDTMALLEIVASPSDHRRIVVCGAGVGGWIACLVAVKRPDLVGGIVGLAADPDFTEDLLLKGLPQETIDSIMTGKVHEVKWGDRVYPITKSLIEDARNHLILQGPERGLPIKCPVRLLHGTRDEEVPYQTAIRLAERIETDDV 305
BLAST of mRNA_H-elongata_contig72268.14898.1 vs. uniprot
Match: F0Y7X5_AURAN (Uncharacterized protein HDR1 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y7X5_AURAN) HSP 1 Score: 142 bits (359), Expect = 7.390e-40 Identity = 72/153 (47.06%), Postives = 103/153 (67.32%), Query Frame = 1
Query: 1 RWKQDAMTLIAKLL-PHHYQKLVIVGGGVGGWIATLIGLELETKVTGFVGLAADPDFTHNLLLRYLPRNKMEEIDNEGKAIIQWGQASYPVTKKLIEDASDN-LVLQGPVGGLPMHCPVRLIHGLDDEEVPYTVSLDLARRLASRNVNLYLVK 453
+W D +TL+ + P ++++V+VG GVGGWIA L+ + V G VGLAADPDFT LLL+ LP++ ++ I EG + WG +YP+TK LIEDA ++ L+L GP LP+ CPVRL+HGL DEEVP+ + LA+R+ + +V + L K
Sbjct: 38 KWVDDTVTLLRTVASPEEHRRVVLVGAGVGGWIACLVAMRHPDLVGGVVGLAADPDFTEELLLKRLPQDVIDRI-MEGMEEVTWGDKTYPITKALIEDAREHHLLLDGPERTLPIQCPVRLLHGLMDEEVPFDTCVRLAQRIETEDVTISLSK 189
BLAST of mRNA_H-elongata_contig72268.14898.1 vs. uniprot
Match: A0A5J4YWA8_PORPP (Mycophenolic acid acyl-glucuronide esterase, mitochondrial n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YWA8_PORPP) HSP 1 Score: 142 bits (357), Expect = 2.310e-38 Identity = 65/151 (43.05%), Postives = 100/151 (66.23%), Query Frame = 1
Query: 1 RWKQDAMTLIAKLLPHHYQKLVIVGGGVGGWIATLIGLELETKVTGFVGLAADPDFTHNLLLRYLPRNKMEEIDNEGKAIIQWGQASYPVTKKLIEDASDNLVLQGPVGGLPMHCPVRLIHGLDDEEVPYTVSLDLARRLASRNVNLYLVK 453
RW +D +T++ ++LP+ +K+V+VG G+GGW+ + ++ V G VGL+ADPDFT LL+ L + EE+D++G + WG YP++KKL++D + LVL G LP+ CPVRLI GL DEE+P T L++ ++ S +VN+ VK
Sbjct: 151 RWVKDVVTILDQILPN--KKVVLVGSGIGGWVMLHVAIQRPEAVVGLVGLSADPDFTERLLMPALSETQREELDSKGIIDLTWGYRKYPISKKLVDDGRNMLVLTGEKDSLPITCPVRLIQGLADEELPSTFPLEIVEKIRSTDVNVTFVK 299
BLAST of mRNA_H-elongata_contig72268.14898.1 vs. uniprot
Match: A0A6S9KBJ4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9KBJ4_HETAK) HSP 1 Score: 139 bits (351), Expect = 1.920e-37 Identity = 66/151 (43.71%), Postives = 100/151 (66.23%), Query Frame = 1
Query: 1 RWKQDAMTLIAKLLPHHYQKLVIVGGGVGGWIATLIGLELETKVTGFVGLAADPDFTHNLLLRYLPRNKMEEIDNEGKAIIQWGQASYPVTKKLIEDASDNLVLQGPVGGLPMHCPVRLIHGLDDEEVPYTVSLDLARRLASRNVNLYLVK 453
+W D + +I +L K+V+ G GVGGWIA L+ L+ V+G VGLAADPDFT +LL++YL +++ +I G I+WG SYP++K+L+ED +NLVL+G L + CPVRL+H + DEEVP++ ++ LA + +V + L+K
Sbjct: 154 KWVADTIKVIEEL--SSTPKVVLCGSGVGGWIAVLVALQRPDLVSGIVGLAADPDFTEDLLMKYLSEDEINKIMENGVHTIKWGATSYPISKRLLEDGRENLVLRGAKSSLNITCPVRLVHSMADEEVPFSTAVRLASCIKGNDVKINLLK 302
BLAST of mRNA_H-elongata_contig72268.14898.1 vs. uniprot
Match: A0A7S0ZDM0_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZDM0_9RHOD) HSP 1 Score: 126 bits (316), Expect = 3.670e-32 Identity = 59/151 (39.07%), Postives = 89/151 (58.94%), Query Frame = 1
Query: 1 RWKQDAMTLIAKLLPHHYQKLVIVGGGVGGWIATLIGLELETKVTGFVGLAADPDFTHNLLLRYLPRNKMEEIDNEGKAIIQWGQASYPVTKKLIEDASDNLVLQGPVGGLPMHCPVRLIHGLDDEEVPYTVSLDLARRLASRNVNLYLVK 453
RW + ++ ++L K+V+VG G+GGWI + + +V G VGL+ADPDFT LLL L + + ++ +G + WG +YP+ K LIED +VL G + + CPVRLI G+ DEE+P + DL +L S++VN+ VK
Sbjct: 165 RWLSEIEAVLDEVLDRSRNKVVLVGSGIGGWIMVHLAMRRPDQVVGLVGLSADPDFTEELLLPALTDEQRQTLEKDGMIDLTWGYRNYPIHKALIEDGKKMVVLNGGSNSIAVKCPVRLIQGMADEEIPTRFAFDLVDKLQSKDVNVTFVK 315
BLAST of mRNA_H-elongata_contig72268.14898.1 vs. uniprot
Match: M2XMT5_GALSU (Hydrolase or acyltransferase n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XMT5_GALSU) HSP 1 Score: 123 bits (309), Expect = 2.600e-31 Identity = 62/151 (41.06%), Postives = 91/151 (60.26%), Query Frame = 1
Query: 1 RWKQDAMTLIAKLLPHHYQKLVIVGGGVGGWIATLIGLELETKVTGFVGLAADPDFTHNLLLRYLPRNKMEEIDNEGKAIIQWGQASYPVTKKLIEDASDNLVLQGPVGGLPMHCPVRLIHGLDDEEVPYTVSLDLARRLASRNVNLYLVK 453
RW +D + L+ L+P +V+VG GVGGW+A + L ++ G VG+A DPDFT ++L L I EG + WG +YP+++ LIED +LQG G + + CPVR+IHGL+DEE+P +L LA RL S+++ + VK
Sbjct: 145 RWTEDTVDLMDHLIPEG--PVVLVGAGVGGWVALHVTLRRPQRIAGIVGVAPDPDFTQDVLWPKLSDEVKNIIMKEGLYELPWGYRTYPISRNLIEDGKKMCLLQGSSGSIEIDCPVRIIHGLNDEEIPPQRALRLADRLRSQDIVISFVK 293 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig72268.14898.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig72268.14898.1 >prot_H-elongata_contig72268.14898.1 ID=prot_H-elongata_contig72268.14898.1|Name=mRNA_H-elongata_contig72268.14898.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=145bp MTLIAKLLPHHYQKLVIVGGGVGGWIATLIGLELETKVTGFVGLAADPDFback to top mRNA from alignment at H-elongata_contig72268:295..2678+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig72268.14898.1 ID=mRNA_H-elongata_contig72268.14898.1|Name=mRNA_H-elongata_contig72268.14898.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2384bp|location=Sequence derived from alignment at H-elongata_contig72268:295..2678+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig72268:295..2678+ >mRNA_H-elongata_contig72268.14898.1 ID=mRNA_H-elongata_contig72268.14898.1|Name=mRNA_H-elongata_contig72268.14898.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=870bp|location=Sequence derived from alignment at H-elongata_contig72268:295..2678+ (Himanthalia elongata Himel1 dioecious)back to top |