mRNA_H-elongata_contig72240.14897.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig72240.14897.1
Unique NamemRNA_H-elongata_contig72240.14897.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig72240.14897.1 vs. uniprot
Match: D7FRL9_ECTSI (Ferredoxin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRL9_ECTSI)

HSP 1 Score: 242 bits (618), Expect = 1.960e-75
Identity = 126/196 (64.29%), Postives = 147/196 (75.00%), Query Frame = 3 
Query:  114 PRSTRCEHKL----CESNGRGGEDLGDVDVDVDDDVTEKGKRVPPQLVQSVLPRPWDVEVVLHGERHIITVHPGDSILEAAEMAGMNISYECRRGSCISCAAKVQSGSSGCFENRADRRADDGAPEGFVLTCSTHPTGPGVKLELSANADMWEAYCKRFDDMETRDLLRQASAGLMRKYRMEHPQDFRREVERQFE 689
            PR+ R  H          G GGE+ GD          + G+  PP+   SVL RPWDVEV  HGER +ITV PGDSILEAAEM+GMN+SYECRRG+CISCAA+VQ+GSS  FEN ADR  +DGAP+GFVLTCSTHPTGPGVKL+LSANA+MW+AYC R DD+ T+DLLRQ SA +MRKYR+EHP  FR EVERQF+
Sbjct:  149 PRAKRGLHATELGAAADRGGGGEECGDEG--------KGGEGKPPR---SVLERPWDVEVDFHGERRVITVQPGDSILEAAEMSGMNLSYECRRGNCISCAARVQNGSSSHFENSADRIPEDGAPDGFVLTCSTHPTGPGVKLDLSANAEMWDAYCARLDDISTQDLLRQTSAEVMRKYRVEHPDYFREEVERQFK 333
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BLAST of mRNA_H-elongata_contig72240.14897.1 vs. uniprot
Match: A0A836CQ20_9STRA (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CQ20_9STRA)

HSP 1 Score: 107 bits (268), Expect = 4.360e-25
Identity = 56/155 (36.13%), Postives = 85/155 (54.84%), Query Frame = 3 
Query:  267 WDVEVVLHGERHIITVHPGDSILEAAEMAGMNISYECRRGSCISCAAKVQSGSSGCFENRADRRA-------------DDGAPEGFVLTCSTHPTGPGVKLELSANADMWEA-YCKRFDDMETRDLLRQASAGLMRKYRMEHPQDFRREVERQFE 689
            W+V   LHGE   + + P D+IL+AAE+AG+   Y+CRRG+C++CA + ++ SS        + A             D+   EGF L+C ++P GPG+++EL    + W+  YC R  D  TR    +A A + R Y   +P  F  ++ERQFE
Sbjct:   11 WEVTFELHGEETTVLMRPDDTILQAAELAGLRAPYDCRRGNCLTCAGRFKAASSYNLVTTLRQEAGGAVTLDSDTFLCDEAKDEGFFLSCCSYPVGPGLRVELGVQKEAWQIQYCDRLRDEATRAAALEAVAQVQRGYSERNPDKFVADLERQFE 165
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BLAST of mRNA_H-elongata_contig72240.14897.1 vs. uniprot
Match: A0A0M0K3H8_9EUKA (Ferredoxin (2fe-2s) n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0K3H8_9EUKA)

HSP 1 Score: 82.0 bits (201), Expect = 7.240e-14
Identity = 49/109 (44.95%), Postives = 64/109 (58.72%), Query Frame = 3 
Query:  261 RPWDVEVVLHGE-RHIITVHPGDSILEAAEMAGMNISYECRRGSCISCAAKVQSGSSGCFENRADRR-ADDGAPEGFVLTCSTHPTGPGVKLELSANADMWEA-YCKRF 578
            R WDV +V   E RH ++V    S+L AAE+AG+    +CRRG C+SCAA+V SGS       +D    D+   EG VL CS +P GP ++L+L A  D  E  Y KRF
Sbjct:  423 RVWDVTLVSADEQRHTLSVAENQSVLRAAELAGLLPCSDCRRGRCLSCAARVVSGSKFSLAVDSDTALCDEAHVEGIVLLCSAYPRGPNLELKLDAEGDALEIQYEKRF 531
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BLAST of mRNA_H-elongata_contig72240.14897.1 vs. uniprot
Match: A0A7S4F9M2_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4F9M2_CHRCT)

HSP 1 Score: 75.1 bits (183), Expect = 6.410e-13
Identity = 41/112 (36.61%), Postives = 64/112 (57.14%), Query Frame = 3 
Query:  249 SVLPRPWDVEVVLHGERHIITVHPGDSILEAAEMAGMNISYECRRGSCISCAAKVQSGSSGCFENRADRRADDGAPE-GFVLTCSTHPTGPGVKLELSANADMWEA-YCKRF 578
            +V+ R W V V +  + H++ V  G  +L A E AG+    +CRRG+C+SCAA++ +G+      R +      A E GFVL CS +  G G+++E+    ++WE  Y KRF
Sbjct:   17 AVVKRAWPVTVHIGRQAHVLRVPEGQPVLLALEAAGLLPGSDCRRGNCLSCAARIINGAPFSLRVRDNTALCSEAHESGFVLLCSAYVCGKGLEIEVDMEGEVWELQYSKRF 128
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BLAST of mRNA_H-elongata_contig72240.14897.1 vs. uniprot
Match: A0A6V1VDI3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1VDI3_HETAK)

HSP 1 Score: 72.4 bits (176), Expect = 7.260e-12
Identity = 38/126 (30.16%), Postives = 67/126 (53.17%), Query Frame = 3 
Query:  228 VPPQLVQSVLP-RPWDVEVVLHGERHIITVHPGDSILEAAEMAGMNISYECRRGSCISCAAKVQSGSSG-CFENRADRRADDGAPEGFVLTCSTHPTGPGVKLELSANADMWEAYCKRFDDMETRD 599
            VP +L   + P + W++E+ L G   ++TV   D +LEAAE    +  + CR G C +C+ ++  G  G  ++       +    +GF ++C TH TGPGVK+EL+    ++E    +++    +D
Sbjct:   36 VPLELEGKLDPSKTWEIELTLDGVTKMVTVSEADCVLEAAEKVFDDPPFSCRNGVCTTCSCRIVEGKEGENYKLAVHGLGETALSQGFTMSCQTHVTGPGVKIELNQYDTVYEMQYGQYEKGTAKD 161
[Close]
BLAST of mRNA_H-elongata_contig72240.14897.1 vs. uniprot
Match: A0A0G4EXA3_VITBC (2Fe-2S ferredoxin-type domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EXA3_VITBC)

HSP 1 Score: 70.5 bits (171), Expect = 1.490e-11
Identity = 37/108 (34.26%), Postives = 58/108 (53.70%), Query Frame = 3 
Query:  261 RPWDVEVVLHGERHIITVHPGDSILEAAEMAGMNISYECRRGSCISCAAKVQSGSSG-CFENRADRRADDGAPEGFVLTCSTHPTGPGVKLELSANADMWEAYCKRFD 581
            R W +E+   G+   + V  G S+LEAAE    +   +CR G C SCA ++  G  G  +    D   +    +G+VLTC T+  GPG+K+EL+ N +++     RF+
Sbjct:   18 RSWTIELNYDGDIETVEVPEGTSVLEAAETVWEDPPCDCRNGVCTSCAGRIVGGKLGEAYVINRDSLEEVTKDKGYVLTCQTYVCGPGLKVELNKNEEVYGMQYGRFE 125
[Close]
BLAST of mRNA_H-elongata_contig72240.14897.1 vs. uniprot
Match: A0A0G4EFE2_VITBC (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EFE2_VITBC)

HSP 1 Score: 71.2 bits (173), Expect = 1.880e-11
Identity = 35/88 (39.77%), Postives = 54/88 (61.36%), Query Frame = 3 
Query:  273 VEVVLHGERHIITVHPGDSILEAAEMAGMNISYECRRGSCISCAAKVQSGSSGCFENRADRRADDGAPEGFVLTCSTHPTGPGVKLEL 536
            V+V ++G+ + +TV+PGDSILEAAE AG+ + ++CR G+C+ C AKV SGS    ++      D+    G+ L C   P    V +E+
Sbjct:   68 VKVSINGDTYDVTVNPGDSILEAAEEAGLELPHDCRLGTCLQCTAKVVSGS---VDHGMGTLDDEVTEAGYTLACQATPLSDDVHIEI 152
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BLAST of mRNA_H-elongata_contig72240.14897.1 vs. uniprot
Match: A0A7S2BT51_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BT51_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 2.540e-11
Identity = 53/151 (35.10%), Postives = 77/151 (50.99%), Query Frame = 3 
Query:  267 WDVEVVLHGERHIITVHPGDSILEAAEMAGMNISYECRRGSCISCAAKV---QSGSSGCFENRADRRA---DDGAPEGFVLTCSTHPTGPGVKLELSANADMWEA-YCKRFDDMETRDLLRQASAGLMRKYRMEHPQDFRREVERQF-EAG 695
            + VE VL     I  +    +IL+  E  G+    ECRRG+C+SC+ K+    + S    +   D      DD   EGF+LTC ++ TGPGV L L    + ++  Y KRF   +   L  +ASA  MR++   +P  F   VE+QF E+G
Sbjct:    5 YKVEFVLPEGSTIGYIRKDQTILDLCEEMGLRPPSECRRGNCLSCSGKLLPESTTSVHTVDETGDCNVFLCDDARREGFLLTCVSYVTGPGVVLHLEQAHEAYKVQYVKRFKKKDVEVLGVEASAQAMREWGERNPAKFIGIVEKQFAESG 155
[Close]
BLAST of mRNA_H-elongata_contig72240.14897.1 vs. uniprot
Match: A0A4D9D796_9STRA (2Fe-2S ferredoxin-type domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D796_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 2.670e-10
Identity = 42/123 (34.15%), Postives = 65/123 (52.85%), Query Frame = 3 
Query:  228 VPPQLVQSVLP-RPWDVEVVLHGERHIITVHPGDSILEAAEMAGMNISYECRRGSCISCAAKVQSGSSGCFENRADRRADDGAPEGFVLTCSTHPTGPGVKLELSANADMWEAYCKRFDDMET 593
            VP +L   + P + WDV++   GE  ++TV     ILEAAE    ++   CR G C +CA +V +      E      A+  +  GFVLTC THP GPG+++EL     ++E+   +++   T
Sbjct:   41 VPLELEGQLDPTKTWDVKMTYKGETKVLTVSEDTCILEAAEKE-WDVPCSCRNGICTTCAGRVIANPDSKKEAIHGLSAEQ-SKNGFVLTCQTHPCGPGLEVELGMYDTVYESQYGQYEKKAT 161
[Close]
BLAST of mRNA_H-elongata_contig72240.14897.1 vs. uniprot
Match: A0A7S2YSW2_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YSW2_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 3.500e-9
Identity = 49/147 (33.33%), Postives = 76/147 (51.70%), Query Frame = 3 
Query:  306 ITVHPGDSILEAAEM-------AGMNIS--YECRRGSCISCAAKVQSGSSGCFENRADRRADDG---------APEGFVLTCSTHPTGPGVKLELSANADMWE-AYCKRFDDMETRDLLRQASAGLMRKYRMEHPQDFRREVERQFE 689
            + V+PG++IL A E        +G NI   ++CRRG+C++C+A+  S S+    N  D   D+G         A  G+VLTCS+  TGPGV L L AN  +W+  Y  R +  ET    R A A  +R     + +++  + E  ++
Sbjct:  109 VPVYPGETILAALERLASSGGTSGANIPPPFDCRRGNCLTCSAQHTSESAAT--NLIDT-TDNGLSPYVAKTIAERGYVLTCSSTVTGPGVSLTLGANNQLWDYVYRGRLESEETESAARAAMAKAIRISAERNVEEWAEQTESAYQ 252
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig72240.14897.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRL9_ECTSI1.960e-7564.29Ferredoxin n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
A0A836CQ20_9STRA4.360e-2536.132Fe-2S ferredoxin-type domain-containing protein n... [more]
A0A0M0K3H8_9EUKA7.240e-1444.95Ferredoxin (2fe-2s) n=1 Tax=Chrysochromulina tobin... [more]
A0A7S4F9M2_CHRCT6.410e-1336.61Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A6V1VDI3_HETAK7.260e-1230.16Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A0G4EXA3_VITBC1.490e-1134.262Fe-2S ferredoxin-type domain-containing protein n... [more]
A0A0G4EFE2_VITBC1.880e-1139.772Fe-2S ferredoxin-type domain-containing protein n... [more]
A0A7S2BT51_9STRA2.540e-1135.10Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A4D9D796_9STRA2.670e-1034.152Fe-2S ferredoxin-type domain-containing protein n... [more]
A0A7S2YSW2_9STRA3.500e-933.33Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig72240contigH-elongata_contig72240:19..2683 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score68.6
Seed ortholog evalue4.6e-09
Seed eggNOG ortholog1172186.KB911465_gene4244
Preferred namepaaE
KEGG rclassRC00098,RC02690
KEGG koko:K00529,ko:K02613
KEGG ReactionR02000,R06782,R06783,R09838
KEGG Pathwayko00071,ko00360,ko01120,ko01220,map00071,map00360,map01120,map01220
KEGG ModuleM00545
GOsGO:0000166,GO:0003674,GO:0005488,GO:0006082,GO:0006725,GO:0006805,GO:0008150,GO:0008152,GO:0009056,GO:0009404,GO:0009407,GO:0009410,GO:0009636,GO:0009850,GO:0009852,GO:0009987,GO:0010124,GO:0010817,GO:0016054,GO:0019439,GO:0019748,GO:0019752,GO:0032787,GO:0036094,GO:0042178,GO:0042221,GO:0042445,GO:0042447,GO:0042537,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0046395,GO:0048037,GO:0050660,GO:0050662,GO:0050896,GO:0051536,GO:0051537,GO:0051540,GO:0051716,GO:0065007,GO:0065008,GO:0070887,GO:0071466,GO:0071704,GO:0072329,GO:0097159,GO:0098754,GO:1901265,GO:1901360,GO:1901361,GO:1901363,GO:1901575
EggNOG free text desc.Oxidoreductase FAD-binding domain
EggNOG OGs235X3@1762,2GKGS@201174,COG1018@1,COG1018@2,COG3239@1,COG3239@2
EC1.18.1.3
COG Functional cat.C
BiGG ReactioniEcHS_1320.EcHS_A1479
Best tax levelMycobacteriaceae
Best eggNOG OGNA|NA|NA
BRITEbr01602,ko00000,ko00001,ko00002,ko01000
Hectar predicted targeting categorysignal peptide
Ec32 ortholog description2Fe-2S ferredoxin-type domain
Ec32 orthologEc-12_002550.1
Exons6
Model size860
Cds size711
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig72240.14897.1prot_H-elongata_contig72240.14897.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig72240 163..2678 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931123.8668158-UTR-H-elongata_contig72240:18..1621622931123.8668158-UTR-H-elongata_contig72240:18..162Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig72240 19..162 -
1691679707.8240843-UTR-H-elongata_contig72240:18..1621691679707.8240843-UTR-H-elongata_contig72240:18..162Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig72240 19..162 -
1622931123.9936101-UTR-H-elongata_contig72240:2678..26831622931123.9936101-UTR-H-elongata_contig72240:2678..2683Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig72240 2679..2683 -
1691679707.9014018-UTR-H-elongata_contig72240:2678..26831691679707.9014018-UTR-H-elongata_contig72240:2678..2683Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig72240 2679..2683 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931123.8846745-CDS-H-elongata_contig72240:162..2671622931123.8846745-CDS-H-elongata_contig72240:162..267Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig72240 163..267 -
1691679707.837533-CDS-H-elongata_contig72240:162..2671691679707.837533-CDS-H-elongata_contig72240:162..267Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig72240 163..267 -
1622931123.906185-CDS-H-elongata_contig72240:832..8831622931123.906185-CDS-H-elongata_contig72240:832..883Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig72240 833..883 -
1691679707.8473248-CDS-H-elongata_contig72240:832..8831691679707.8473248-CDS-H-elongata_contig72240:832..883Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig72240 833..883 -
1622931123.9219997-CDS-H-elongata_contig72240:1213..12941622931123.9219997-CDS-H-elongata_contig72240:1213..1294Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig72240 1214..1294 -
1691679707.8595748-CDS-H-elongata_contig72240:1213..12941691679707.8595748-CDS-H-elongata_contig72240:1213..1294Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig72240 1214..1294 -
1622931123.9358885-CDS-H-elongata_contig72240:1496..15551622931123.9358885-CDS-H-elongata_contig72240:1496..1555Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig72240 1497..1555 -
1691679707.8704438-CDS-H-elongata_contig72240:1496..15551691679707.8704438-CDS-H-elongata_contig72240:1496..1555Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig72240 1497..1555 -
1622931123.9536536-CDS-H-elongata_contig72240:1795..18741622931123.9536536-CDS-H-elongata_contig72240:1795..1874Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig72240 1796..1874 -
1691679707.881792-CDS-H-elongata_contig72240:1795..18741691679707.881792-CDS-H-elongata_contig72240:1795..1874Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig72240 1796..1874 -
1622931123.9750593-CDS-H-elongata_contig72240:2342..26781622931123.9750593-CDS-H-elongata_contig72240:2342..2678Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig72240 2343..2678 -
1691679707.891937-CDS-H-elongata_contig72240:2342..26781691679707.891937-CDS-H-elongata_contig72240:2342..2678Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig72240 2343..2678 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig72240.14897.1

>prot_H-elongata_contig72240.14897.1 ID=prot_H-elongata_contig72240.14897.1|Name=mRNA_H-elongata_contig72240.14897.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=237bp
MSSIVKYVTTLALLCPSPYVSAFGIRPSQGMQPMQAPRSTRCEHKLCESN
GRGGEDLGDVDVDVDDDVTEKGKRVPPQLVQSVLPRPWDVEVVLHGERHI
ITVHPGDSILEAAEMAGMNISYECRRGSCISCAAKVQSGSSGCFENRADR
RADDGAPEGFVLTCSTHPTGPGVKLELSANADMWEAYCKRFDDMETRDLL
RQASAGLMRKYRMEHPQDFRREVERQFEAGVAAPDP*
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mRNA from alignment at H-elongata_contig72240:19..2683-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig72240.14897.1 ID=mRNA_H-elongata_contig72240.14897.1|Name=mRNA_H-elongata_contig72240.14897.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2665bp|location=Sequence derived from alignment at H-elongata_contig72240:19..2683- (Himanthalia elongata Himel1 dioecious)
AGGTGATGTCCTCAATCGTCAAGTACGTGACAACTTTAGCTCTGTTATGC
CCATCCCCATATGTATCCGCCTTTGGGATTCGTCCATCGCAAGGCATGCA
ACCTATGCAAGCTCCACGATCCACAAGATGCGAGCATAAACTGTGCGAAT
CGAACGGTAGAGGGGGCGAGGATTTGGGGGATGTCGACGTTGATGTTGAT
GATGATGTCACGGAGAAGGGGAAGAGAGTCCCCCCCCAATTGGTCCAATC
GGTGCTACCAAGACCGTGGGACGTTGAAGTCGTTCTGCACGGCGAGCGAC
ACATCATCACGGTGCACCCTGGTGATAGCATTTTGGAGGCTGTGAGTTCG
AACCTGGAGACAGAACGGTATCCACTTTTAGGGCCTCTTGGTGACTTTCG
TAATGTAATGTACTGTACCAGCTCCGTCCCATCATCTATGATAATGGATT
CAATAATCTCTTATCATCTCTTATCATGGATTCAATAATCTCTTATCATC
TCTGATAATGGATTCAATAGTCTCTTATCATGGATTCAATAATCTCTTAT
CATCTCTTATAATGGATCCAGTGATTTTTTTGTTTCCTGGAGTCTATTAC
ACCCTATTACTGTACACCACTCTGAGGAAGAATATCCGCTTATTAACCAC
TCGCAAGTCTCGTACTTCTCTAGAAATTTCGATGTTAACGATGGCATGTC
TTTGGTGAGAGTATTGATATGTCTTTAGTGATGGTATTGAGATTTTGCAG
CTACCTCCATCTCTATATCCTCTATATCTATCTGAGGGTATTCGTGTAAC
ACACCACAGGCGGAGATGGCGGGGATGAACATTTCGTACGAATGCAGAAG
AGGCAGCTGCATAAGTTGTGCAGCAAAGGTCCAGAGCGGTGAGCGAAATA
ATCTATAATTCAGATAAGTTGAATTTCGACGGTCTGTTGTAGAAATAGTT
GTTTTAGAGAAAAGCGTTGTAGAGAACAGAAATGCCGAATAAAAATAATT
CACCGCGTCGTGAGAACTTTGCTCTTTCCTCTTGCTGTGCCAATGTTTTG
AAGCCGTTGTGTTGGTCAGAAAACTGATTCGCCTGTTGAAGAAGCTCGCC
ATCCTCCTGTGCTCTGCGATGTTTATAGGATCGTCAGGGTGCTTTGAGAA
TAGGGCGGACAGGAGAGCAGACGACGGAGCTCCTGAAGTGAGCGCTAATA
ATTCAAGAAGACTCAAGAGTTGCCATGTCAATGAAATCAGGAGTCAGGAG
TCACGTGCTGTTGTAATGTCAATGGAATAGGACACAGCGCAAGGATTTAA
TAATTTGATTATATAGTGTAGCCAAATGTAAGGTGCAGTGCGAGCTGAAC
GAACTTCATCGGCCGTGCCAACTGTCGACCGTCGACCAGGGGTTCGTTCT
CACTTGCAGCACGCATCCCACGGGACCAGGTGTTAAGCTAGAGCTGTCTG
CCAATGCCGACATGTGGGAGGTGAGTTGGCAGCATCCACGGAATCATAGG
CATAATGGCGATTGAGGGTACGATTCACCACGTCCGTCTATGTCGGCAGT
GCAGGACTATGTCGGCAGGACAAATCCCTTCCTCCGACAGTATACAGTAC
AATAGGGGCCATAGGGGCCATAGCTTCGTGCTACCCCCCCCTAAAACGCC
AAAGGTCTCAAATTTTAAATTTCCGCGAGAACACCCCCCCCCCCCCTCCA
AACACCCTGGAAAACTGAGTCTTTTTGAGCGTCCGACTTGACCATATTCC
CCCGGTGGCGGGTACTGCTGTCTTCCTCATTTTGTTGCTGTCGTGGGCAG
GCCTACTGCAAGCGATTCGACGACATGGAAACGCGTGACCTTTTGAGACA
GGTCAGGGCATTATATGTTGTTCAATATTGTTGTTTGGACATCCTCAAGT
ATGTATATATAGATATATATATATATTGATTTTACCTGGGTTTTGTATTT
TTAGCAATATTTTAGGCACTTTTTCACGGAAGCCTGTTTATGCTATGATT
TCTATTGGTATTCGTGGGTGGGCTCATTACGTTTTTACAGTAGGTTTAAC
AGTTTAAATTACTATCTTTAGGCTAGTTTATATAACTGTGGCTCCGAACA
ATAATGTATCCAGTCATACGTTGTTATATATTGTGTGAGGACTAAAGATA
ATTCTCGATTCTCGACGTAATTTCGAAAATCGCGACACTAACACGGGGAT
GTGTTCCTTATGCAAGTCAGTTTCTGAACACGACCCTCTCAGTTTCGTTT
GAACTTGGCATAGGCAAGCCCCGACCGGGTCGATTTTTTTGTTAGTATTC
GGAGAAGGCAATCGATCGATAGACCTCAAGGGTCGCCCCAATGCCCGTCA
CCACCAAAATCATATACGTAACATGGTGATATGGTAGTCTAATATGGAAA
TGTTTTGCTGCTACAGGCATCAGCCGGATTGATGCGCAAGTATCGGATGG
AGCATCCTCAAGACTTTAGGCGGGAGGTGGAGCGACAGTTCGAGGCTGGA
GTGGCAGCACCGGACCCATGATGGCATTTCAGCTTTTTGTGTTATTCTAT
TATGGAGTGGCAGCTTTTTTATTCCTACGGACTCGAAAGGTCGAATCGAT
CAATTTATTAAAAAATATATATGAACTCATTCCAACCCTCCGAACATCCA
CACCTTCTTAGCACC
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Coding sequence (CDS) from alignment at H-elongata_contig72240:19..2683-

>mRNA_H-elongata_contig72240.14897.1 ID=mRNA_H-elongata_contig72240.14897.1|Name=mRNA_H-elongata_contig72240.14897.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1422bp|location=Sequence derived from alignment at H-elongata_contig72240:19..2683- (Himanthalia elongata Himel1 dioecious)
ATGTCCTCAATCGTCAAGTACGTGACAACTTTAGCTCTGTTATGCCCATC
CCCATATGTATCCGCCTTTGGGATTCGTCCATCGCAAGGCATGCAACCTA
TGCAAGCTCCACGATCCACAAGATGCGAGCATAAACTGTGCGAATCGAAC
GGTAGAGGGGGCGAGGATTTGGGGGATGTCGACGTTGATGTTGATGATGA
TGTCACGGAGAAGGGGAAGAGAGTCCCCCCCCAATTGGTCCAATCGGTGC
TACCAAGACCGTGGGACGTTGAAGTCGTTCTGCACGGCGAGCGACACATC
ATCACGGTGCACCCTGGTGATAGCATTTTGGAGGCTATGTCCTCAATCGT
CAAGTACGTGACAACTTTAGCTCTGTTATGCCCATCCCCATATGTATCCG
CCTTTGGGATTCGTCCATCGCAAGGCATGCAACCTATGCAAGCTCCACGA
TCCACAAGATGCGAGCATAAACTGTGCGAATCGAACGGTAGAGGGGGCGA
GGATTTGGGGGATGTCGACGTTGATGTTGATGATGATGTCACGGAGAAGG
GGAAGAGAGTCCCCCCCCAATTGGTCCAATCGGTGCTACCAAGACCGTGG
GACGTTGAAGTCGTTCTGCACGGCGAGCGACACATCATCACGGTGCACCC
TGGTGATAGCATTTTGGAGGCTGCGGAGATGGCGGGGATGAACATTTCGT
ACGAATGCAGAAGAGGCAGCTGCATAAGTTGTGCAGCAAAGGTCCAGAGC
GGCGGAGATGGCGGGGATGAACATTTCGTACGAATGCAGAAGAGGCAGCT
GCATAAGTTGTGCAGCAAAGGTCCAGAGCGGATCGTCAGGGTGCTTTGAG
AATAGGGCGGACAGGAGAGCAGACGACGGAGCTCCTGAAGATCGTCAGGG
TGCTTTGAGAATAGGGCGGACAGGAGAGCAGACGACGGAGCTCCTGAAGG
GTTCGTTCTCACTTGCAGCACGCATCCCACGGGACCAGGTGTTAAGCTAG
AGCTGTCTGCCAATGCCGACATGTGGGAGGGGTTCGTTCTCACTTGCAGC
ACGCATCCCACGGGACCAGGTGTTAAGCTAGAGCTGTCTGCCAATGCCGA
CATGTGGGAGGCCTACTGCAAGCGATTCGACGACATGGAAACGCGTGACC
TTTTGAGACAGGCCTACTGCAAGCGATTCGACGACATGGAAACGCGTGAC
CTTTTGAGACAGGCATCAGCCGGATTGATGCGCAAGTATCGGATGGAGCA
TCCTCAAGACTTTAGGCGGGAGGTGGAGCGACAGTTCGAGGCTGGAGTGG
CAGCACCGGACCCATGAGCATCAGCCGGATTGATGCGCAAGTATCGGATG
GAGCATCCTCAAGACTTTAGGCGGGAGGTGGAGCGACAGTTCGAGGCTGG
AGTGGCAGCACCGGACCCATGA
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