mRNA_H-elongata_contig72212.14891.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig72212.14891.1
Unique NamemRNA_H-elongata_contig72212.14891.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig72212.14891.1 vs. uniprot
Match: A0A834FTG5_RHOSS (Uncharacterized protein n=3 Tax=Rhododendron simsii TaxID=118357 RepID=A0A834FTG5_RHOSS)

HSP 1 Score: 259 bits (662), Expect = 6.120e-80
Identity = 139/317 (43.85%), Postives = 206/317 (64.98%), Query Frame = 1
Query:    1 LPKTMFHRNMKKLGVKVIKRFLKPLLTKQGKIDRLRWGRRWVATSAVPVGPRRFKGMVNVVHIDEKWFFVCKDKQTYYVLDEEPDPGRKVQRKSHILKAVFVGAVTRPRRNTSSNSDFDGKIGIYPFTHQVRAQRSSRNRAAGTMVTKTI-EVTKESYKRMLIDRVIPDIKRVFPRPPASASPEDRIVWLQQDNARPYLVNNDSELTVTLSSDGWDIRMLNQPANSPDTNILDLGFLNSIQSLQDRTTPKNIDDLIKVVKDAWEEDSPAVLNRVWLSL*ACLEQIMLAGGDNSYKLPHLHKGRLETTGTLPWQLECK 948
            +PKT  HR +K+  ++     LKP L++Q K  RL++    +  S     PR+FK M N VHIDEKWF++ K+ ++YY+L EE +P R  + K  I K +F+ AV RPR + + N +F GKIGI+PF  +  A+RSS+NR AGT+ TK I  VTK+  +  LI++V+P I+  +P  P+SA      +++QQDNA+P++   D +     + DG+DIR+ NQP +SPD N+LDLG+  +IQSLQ +  PK ID+L+  V+ ++EE S   LNRV++SL AC+ ++M     N+YKLPH+ K +L  +  LP QLEC+
Sbjct:   87 VPKTTIHRRIKEGKIRPHSNALKPYLSEQAKKARLQFCLSMLEPSEDESQPRKFKSMYNYVHIDEKWFYMTKEAESYYLLPEEEEPHRTCKSKRFIPKVMFLAAVARPRFDANQNEEFSGKIGIFPFVFKEPARRSSKNRPAGTLETKAILSVTKDIIRSCLINQVLPAIQSKWP--PSSAH---ETIFIQQDNAKPHIQPFDLQFVEAATKDGFDIRLSNQPPSSPDMNVLDLGYFRAIQSLQHQEAPKTIDELVNAVEKSFEELSVDSLNRVFVSLQACMVEVMKVHEGNNYKLPHIGKNQLIRSAMLPSQLECE 398          
BLAST of mRNA_H-elongata_contig72212.14891.1 vs. uniprot
Match: A0A834LPB9_RHOSS (Uncharacterized protein n=1 Tax=Rhododendron simsii TaxID=118357 RepID=A0A834LPB9_RHOSS)

HSP 1 Score: 259 bits (663), Expect = 7.190e-80
Identity = 142/316 (44.94%), Postives = 203/316 (64.24%), Query Frame = 1
Query:    1 LPKTMFHRNMKKLGVKVIKRFLKPLLTKQGKIDRLRWGRRWVATSAVPVGPRRFKGMVNVVHIDEKWFFVCKDKQTYYVLDEEPDPGRKVQRKSHILKAVFVGAVTRPRRNTSSNSDFDGKIGIYPFTHQVRAQRSSRNRAAGTMVTKTI-EVTKESYKRMLIDRVIPDIKRVFPRPPASASPEDRIVWLQQDNARPYLVNNDSELTVTLSSDGWDIRMLNQPANSPDTNILDLGFLNSIQSLQDRTTPKNIDDLIKVVKDAWEEDSPAVLNRVWLSL*ACLEQIMLAGGDNSYKLPHLHKGRLETTGTLPWQLEC 945
            +P+T  HR +K   ++     LKP L+++GK  RL++    +  S++   P  FK M N VHIDEKWFF+ K+ + YY+L  E +P R  + K  I K +F+ AV RPR +T+ N +F GKIGI+PFT++  A+R+S+NR AGT+ TK +  VTKE  ++ LI++V+P I+  +PR     +     + +QQDNARP++   D+E     S DG+DIR+  QP NSPD N+LDLGF  +IQSLQ +  PKNID+L+ VV  A+EE SP  L+ V+L+L AC+ +IM   G   YK+PH+ KG L     LP QL+C
Sbjct:  117 VPRTTIHRRVKDGVMRPHTNPLKPCLSEEGKRARLQFCLSMLEPSSLQSQPT-FKNMYNYVHIDEKWFFMTKESERYYLLPHENEPLRTCKSKHFITKVMFLAAVARPRFDTTRNQEFSGKIGIFPFTYKEPAKRTSKNRVAGTLETKVVVSVTKEIIRKCLIEKVLPAIRAKWPRGNGIET-----ILIQQDNARPHIREFDAEFLEEASKDGFDIRLSFQPPNSPDLNVLDLGFFRAIQSLQYQKAPKNIDELVSVVVSAFEELSPQTLDNVFLTLQACMIEIMKVNGGIGYKVPHIGKGGLMRDDNLPTQLQC 426          
BLAST of mRNA_H-elongata_contig72212.14891.1 vs. uniprot
Match: UPI0007F012D1 (uncharacterized protein LOC108203813 n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=UPI0007F012D1)

HSP 1 Score: 251 bits (641), Expect = 1.380e-77
Identity = 139/315 (44.13%), Postives = 193/315 (61.27%), Query Frame = 1
Query:    7 KTMFHRNMKKLGVKVIKRFLKPLLTKQGKIDRLRWGRRWVATSAVPVGPRRFKGMVNVVHIDEKWFFVCKDKQTYYVLDEEPDPGRKVQRKSHILKAVFVGAVTRPRRNTSSNSDFDGKIGIYPFTHQVRAQRSSRNRAAGTMVTKTIE-VTKESYKRMLIDRVIPDIKRVFPRPPASASPEDRIVWLQQDNARPYLVNNDSELTVTLSSDGWDIRMLNQPANSPDTNILDLGFLNSIQSLQDRTTPKNIDDLIKVVKDAWEEDSPAVLNRVWLSL*ACLEQIMLAGGDNSYKLPHLHKGRLETTGTLPWQLECK 948
            KT  HR +++  ++     +KP LT+  K  RL +       S +      F  M NVVHIDEKWF++CK    YY++ +EP+P R+V+ K  I KA+F+ AV RPR        F GKIGI+PFT    A+R+S+NR AGTMVTK  E +TKE  K  LI++VIP I   +P+         R + +QQDNA+P++  N++E     S DG+DIR++ QP NSPD N+LDLGF  SIQ LQ    P  I++L+  VK +++E     LNRV+L+   C+++IM   GDN YK+PH+ K RLE  GTLP Q+ C+
Sbjct:   50 KTTVHRRVQEGLIRPHTNAVKPTLTEDNKRTRLEF-----CLSQIDPDTLLFSDMFNVVHIDEKWFYMCKTTTKYYLVHDEPEPTRRVKSKRFITKAMFLAAVARPRNG------FSGKIGIFPFTFIEPAKRNSKNRVAGTMVTKVDESITKEKVKSCLIEKVIPAIHAKWPQ-------GMRTIIIQQDNAKPHIDCNNAEFMQAASKDGFDIRLICQPPNSPDLNVLDLGFFRSIQDLQHEKAPTTIEELVAAVKQSFDEYPVEKLNRVFLTQQTCMKEIMKFKGDNDYKIPHMGKDRLEREGTLPLQIRCE 346          
BLAST of mRNA_H-elongata_contig72212.14891.1 vs. uniprot
Match: UPI0020096116 (uncharacterized protein LOC125197723 n=1 Tax=Salvia hispanica TaxID=49212 RepID=UPI0020096116)

HSP 1 Score: 251 bits (642), Expect = 1.870e-77
Identity = 136/297 (45.79%), Postives = 193/297 (64.98%), Query Frame = 1
Query:   64 LKPLLTKQGKIDRLRWGRRWVATSAVPVGPRRFKGMVNVVHIDEKWFFVCKDKQTYYVLDEEPDPGRKVQRKSHILKAVFVGAVTRPRRNTSSNSDFDGKIGIYPFTHQVRAQRSSRNRAAGTMVTKTI-EVTKESYKRMLIDRVIPDIKRVFPRPPASASPEDRIVWLQQDNARPYLVNNDSELTVTLSSDGWDIRMLNQPANSPDTNILDLGFLNSIQSLQDRTTPKNIDDLIKVVKDAWEEDSPAVLNRVWLSL*ACLEQIMLAGGDNSYKLPHLHKGRLETTGTLPWQLECKE 951
            +KP LT+  KI R+RW    +   A+  G   +  M+N VHIDEKWF++ K    YY+L +E +P R  + K  I K +F+ AV+RP+  T   + FDGKIGI+PFT QV A+R S+NR  GT+ TK I  V KE+ +  L++++IP IK  +P   A+AS E   +++QQDNA+P+L ++DS+     SSDG+   +++QPANSPDTN+LDLGF  +IQSLQD     NID L+  V  ++EE +P  LN V+L+L +C  +I+   G N+YK+PHL+K RL  T  LP  LE +E
Sbjct:   63 IKPALTEANKISRMRWCLSHIQP-AIYEGKLLYHAMLNTVHIDEKWFYMTKASDRYYLLPDEDEPYRSCKSKRFITKVMFMCAVSRPQFGTDGQTIFDGKIGIFPFTEQVPAKRKSKNRPRGTLETKPIPSVNKEAMRECLLNQIIPAIKAKWP---ANASKE---IYIQQDNAKPHLNSSDSQFEALASSDGFKFHLISQPANSPDTNVLDLGFFRAIQSLQDDKVATNIDQLLGNVWSSFEELTPQTLNNVFLTLQSCFSKILEVHGGNNYKIPHLNKERLRRTVGLPTSLEVEE 352          
BLAST of mRNA_H-elongata_contig72212.14891.1 vs. uniprot
Match: UPI0020091A08 (uncharacterized protein LOC125206097 n=1 Tax=Salvia hispanica TaxID=49212 RepID=UPI0020091A08)

HSP 1 Score: 253 bits (646), Expect = 3.300e-77
Identity = 142/317 (44.79%), Postives = 201/317 (63.41%), Query Frame = 1
Query:    7 KTMFHRNMKKLGVKVIKRFLKPLLTKQGKIDRLRWGRRWVATSAVPVGPRRFKGMVNVVHIDEKWFFVCKDKQTYYVLDEEPDPGRKVQRKSHILKAVFVGAVTRPRRNTSSNSDFDGKIGIYPFTHQVRAQRSSRNRAAGTMVTKTIE-VTKESYKRMLIDRVIPDIKRVFPRPPASASPEDRIVWLQQDNARPYLVNNDSELTVTLSSDGWDIRMLNQPANSPDTNILDLGFLNSIQSLQDRTTPKNIDDLIKVVKDAWEEDSPAVLNRVWLSL*ACLEQIMLAGGDNSYKLPHLHKGRLETTGTLPWQLECKEE 954
            KT  H  +K+  ++     +KP LT+  K+ RL+W    +  S +  G   F GM N+VHIDEKWF++ K    YY+L +E +P R  + K +I K +F+ AV+RP+ ++     +DGK+GI+PFT  V AQR S+NR  GT+ TK I  + KE  +  +I ++IP IK  +P     AS E   +++QQDNA P++   D E     +SDG+ I ++ QP NSPDTNILDLGF  +IQSLQ +   +N+D+L++ V  A+EE +P  LNRV+LSL ACL QI+   GDNSYK+PH++K RLE TG LP  LE  E+
Sbjct:  113 KTTIHNWIKQDKLRPHTNAIKPALTELNKLARLKWCLTQLQPS-ITQGKVHFHGMHNIVHIDEKWFYMTKTSDRYYLLPDEDEPYRSCKSKRYITKVMFMCAVSRPQFDSEGQPTYDGKVGIFPFTEAVPAQRKSKNRDRGTLETKPITTLNKEVMRGCIIHKIIPAIKAKWPD---WASKE---IYIQQDNATPHITATDPEFQAIANSDGFKIHLICQPPNSPDTNILDLGFFRAIQSLQHQKPCRNVDELVENVCKAYEELTPQTLNRVFLSLQACLTQILQFRGDNSYKVPHMNKDRLERTGGLPNVLEVDED 422          
BLAST of mRNA_H-elongata_contig72212.14891.1 vs. uniprot
Match: A0A834FW95_RHOSS (Uncharacterized protein n=3 Tax=Rhododendron simsii TaxID=118357 RepID=A0A834FW95_RHOSS)

HSP 1 Score: 253 bits (645), Expect = 3.640e-77
Identity = 136/316 (43.04%), Postives = 200/316 (63.29%), Query Frame = 1
Query:    1 LPKTMFHRNMKKLGVKVIKRFLKPLLTKQGKIDRLRWGRRWVATSAVPVGPRRFKGMVNVVHIDEKWFFVCKDKQTYYVLDEEPDPGRKVQRKSHILKAVFVGAVTRPRRNTSSNSDFDGKIGIYPFTHQVRAQRSSRNRAAGTMVTKTIE-VTKESYKRMLIDRVIPDIKRVFPRPPASASPEDRIVWLQQDNARPYLVNNDSELTVTLSSDGWDIRMLNQPANSPDTNILDLGFLNSIQSLQDRTTPKNIDDLIKVVKDAWEEDSPAVLNRVWLSL*ACLEQIMLAGGDNSYKLPHLHKGRLETTGTLPWQLEC 945
            +PK+  H+ +K+  ++     LKP L+ Q KI RL +    +  +++   P  FK M N VHIDEKWF++ K+ + YYVL +E  P R  + K  I K +F+ AV RPR   +   +F GKIGI+PFT +  A+R+S+NR AGTM TK +  VTK+  +  LI++VIP I+  + +     S     +++QQDNARP++  ND E     + +G+DIR+ NQPANSPD N+LDLGF N+IQSLQ +  P+ ID L+  V+ ++++     L+ V+LSL AC+ ++M   G N+YKLPH+ K +L   G LP+QLEC
Sbjct:  118 VPKSTLHQRIKEGEIRPHTNPLKPNLSDQNKIARLHFCLSMLEPNSLQTQPM-FKAMYNYVHIDEKWFYMTKESERYYVLPDEDQPHRTCKSKRFITKVMFLAAVARPRFGANGCEEFSGKIGIFPFTVKEPAKRTSKNRLAGTMETKAVAAVTKDVIRSYLIEKVIPAIQSKWHQ-----SSVGETIYIQQDNARPHIKPNDVEFHEAATRNGFDIRLTNQPANSPDLNVLDLGFFNAIQSLQHQEAPRTIDQLVNAVEKSFDKLPSRELDSVFLSLQACMVEVMKVNGGNNYKLPHIKKPQLRRDGVLPFQLEC 427          
BLAST of mRNA_H-elongata_contig72212.14891.1 vs. uniprot
Match: A0A452XZT7_AEGTS (Uncharacterized protein n=2 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A452XZT7_AEGTS)

HSP 1 Score: 246 bits (628), Expect = 1.170e-75
Identity = 135/321 (42.06%), Postives = 197/321 (61.37%), Query Frame = 1
Query:   10 TMFHRNMKKLGVKVIKRF---LKPLLTKQGKIDRLRWGRRWVATSAVPVGPRRFKGMVNVVHIDEKWFFVCKDKQTYYVLDEEPDPGRKVQRKSHILKAVFVGAVTRPRRNTSSNSDFDGKIGIYPFTHQVRAQRSSRNRAAGTMVTKTIEVTKESYKRMLIDRVIPDIKRVFPRPPASASPEDRIVWLQQDNARPYLVNNDSELTVTLSSDGWDIRMLNQPANSPDTNILDLGFLNSIQSLQDRTTPKNIDDLIKVVKDAWEEDSPAVLNRVWLSL*ACLEQIMLAGGDNSYKLPHLHKGRLETTGTLPWQLECKEEAWA 963
            T  HR   K  +K+IKR    LKP+L ++ K DR+++    +  +       +FK M N++HID+KWF++ K K+ YY+L  E +P R +Q  S I K +F+ AV RPR +   N  F GKIGI+PF  +V AQR S NR  GT+ TK+I+V ++  +  +I+ ++P I+  +P   A  +     +++QQDNA+P+++ ND E    +   G DIR++ QP NSPD N L+LGF NS+QSL D  +P+ + DLIK V D +E      LNRV+LSL AC+ +I+   G N YK+PH +K RLE  G LP +L C  E +A
Sbjct:   34 TTLHR---KFMLKLIKRHTNSLKPVLEEKNKKDRMKYCLSMLHETTTQTERPKFKTMHNIIHIDKKWFYMTKKKRNYYLLYGEEEPTRTLQNGSCIGKVMFLTAVARPRWDNEGNVTFSGKIGIWPFVKEVSAQRRSDNRPRGTLETKSIKVNRQVMREFMIENLLPAIQASWPENDAGQT-----IYIQQDNAKPHILPNDPEFVAAVERTGLDIRLIQQPVNSPDLNGLELGFFNSLQSLTDCLSPRTLQDLIKGVLDEFENYEVYKLNRVFLSLQACMIEILNHAGGNGYKIPHANKERLENLGMLPPRLTCPREVYA 346          
BLAST of mRNA_H-elongata_contig72212.14891.1 vs. uniprot
Match: UPI001966F856 (uncharacterized protein LOC112416713 n=1 Tax=Medicago truncatula TaxID=3880 RepID=UPI001966F856)

HSP 1 Score: 245 bits (625), Expect = 1.420e-75
Identity = 132/312 (42.31%), Postives = 198/312 (63.46%), Query Frame = 1
Query:   19 HRNMKKLGVKVIKRFLKPLLTKQGKIDRLRWGRRWVATSAVPVGPRRFKGMVNVVHIDEKWFFVCKDKQTYYVLDEEPDPGRKVQRKSHILKAVFVGAVTRPRRNTSSNSDFDGKIGIYPFTHQVRAQRSSRNRAAGTMVTKTI-EVTKESYKRMLIDRVIPDIKRVFPRPPASASPED--RIVWLQQDNARPYLVNNDSELTVTLSSDGWDIRMLNQPANSPDTNILDLGFLNSIQSLQDRTTPKNIDDLIKVVKDAWEEDSPAVLNRVWLSL*ACLEQIMLAGGDNSYKLPHLHKGRLETTGTLPWQLEC 945
            HR +K   ++     +KP LT++ K  RLR+    + +S++P  P  F  M N++HIDEKWF + K  + YY+L +E DP R    K+ I K +F+ A+ RPR +   N  F GKIGI+PF     A+RSS+NRAAGT+ TK +  VT+E  K+ ++ +V+P+   ++PR       ED  R++++QQDNAR ++  +D +     S +G+DIR++ QPANSPD NILDLGF  +IQSLQ +  PK++D+L+  V  ++EE S  + NR++LSL  C+ +IM A G N Y +PH+ K  LE  G LP +++C
Sbjct:   16 HRRVKLGDIQKHSSAIKPSLTEEHKRARLRFCLSMLESSSLPHNPI-FSEMYNIIHIDEKWFNMTKKNEKYYLLPDEEDPERNCSSKNFIGKVMFLAAIARPRFDAQRNEVFSGKIGIFPFVTLEPAKRSSKNRAAGTLETKPMTSVTREIIKQFMLKQVLPNTMEIWPR-------EDIGRLIFIQQDNARTHISCDDEDFCRAASQNGFDIRLMCQPANSPDLNILDLGFFRAIQSLQHKKAPKSVDELVNAVVKSFEEYSVVLSNRIFLSLQLCMIEIMKARGSNKYSIPHMKKEMLERQGKLPRRMKC 319          
BLAST of mRNA_H-elongata_contig72212.14891.1 vs. uniprot
Match: UPI00073A4D58 (uncharacterized protein LOC107061740 n=4 Tax=Solanum tuberosum TaxID=4113 RepID=UPI00073A4D58)

HSP 1 Score: 251 bits (641), Expect = 1.480e-75
Identity = 137/298 (45.97%), Postives = 190/298 (63.76%), Query Frame = 1
Query:   64 LKPLLTKQGKIDRLRWGRRWVATSAVPVGPRRFKGMVNVVHIDEKWFFVCKDKQTYYVLDEEPDPGRKVQRKSHILKAVFVGAVTRPRRNTSSNSDFDGKIGIYPFTHQVRAQRSSRNRAAGTMVTKTIEVT-KESYKRMLIDRVIPDIKRVFPRPPASASPEDRIVWLQQDNARPYLVNNDSELTVTLSSDGWDIRMLNQPANSPDTNILDLGFLNSIQSLQDRTTPKNIDDLIKVVKDAWEEDSPAVLNRVWLSL*ACLEQIMLAGGDNSYKLPHLHKGRLETTGTLPWQLECKEE 954
            +KP LT+Q KI RL++    V   ++P  P  F  M N+VHIDEKWF++ K KQTYY+L  E +  R  +  ++ILK +F+ A+ RPR +   N  F GKIGI+PF  Q  AQR S NR AGT+ TK I V  ++  +  LID+VIP IK  +P            +++QQDNAR ++  ND E     S DG+DIR++ QP NSPD N+LDLGF ++IQ+LQ +  PKNID+LI VV +A+E  S  + NR++L+L +C+++IM  GG N Y +PH+ K  L+ TG LP  L+C  E
Sbjct:  229 IKPFLTEQNKISRLQFCLSMVDRDSIPDDPS-FIDMYNIVHIDEKWFYMTKKKQTYYMLPGEEEQLRSCKSSNYILKIMFLVALARPRIDALGNVLFCGKIGIWPFVIQEEAQRGSVNRPAGTLETKPISVVNRDVIRSFLIDKVIPSIKEKWP-----IGDSTHPIYIQQDNARTHVKINDDEFRQVASQDGFDIRLMCQPPNSPDMNVLDLGFFSAIQALQHQEAPKNIDELISVVTNAYEVFSERMSNRIFLTLQSCMKEIMRIGGFNKYNIPHIKKEILQRTGQLPISLKCDSE 520          
BLAST of mRNA_H-elongata_contig72212.14891.1 vs. uniprot
Match: UPI002008F387 (uncharacterized protein LOC125210222 n=2 Tax=Salvia hispanica TaxID=49212 RepID=UPI002008F387)

HSP 1 Score: 249 bits (637), Expect = 1.980e-75
Identity = 133/297 (44.78%), Postives = 193/297 (64.98%), Query Frame = 1
Query:   64 LKPLLTKQGKIDRLRWGRRWVATSAVPVGPRRFKGMVNVVHIDEKWFFVCKDKQTYYVLDEEPDPGRKVQRKSHILKAVFVGAVTRPRRNTSSNSDFDGKIGIYPFTHQVRAQRSSRNRAAGTMVTKTI-EVTKESYKRMLIDRVIPDIKRVFPRPPASASPEDRIVWLQQDNARPYLVNNDSELTVTLSSDGWDIRMLNQPANSPDTNILDLGFLNSIQSLQDRTTPKNIDDLIKVVKDAWEEDSPAVLNRVWLSL*ACLEQIMLAGGDNSYKLPHLHKGRLETTGTLPWQLECKE 951
            +KP LT   KI R+RW    +  + +  G   +  M N+VHIDEKWF++ K    YY+L +E +P R  + K  I K +F+ AV+RP   +   + FDGKIGI+PFT QV A+R S+NR  GT+ TK I  V KE+ +  L++++IP IK  +P   A+AS E   +++QQDNA+P+L ++D +     S+DG+   +++QPANSPDTN+LDLGF  +IQSLQD     NID+L+  V  ++EE +P  LN+V+L+L +CL +I+   G N+YK+PHL+K RL  T  LP  LE +E
Sbjct:  170 IKPALTDANKISRMRWCLTHIQPT-IAEGKLLYHAMHNIVHIDEKWFYMTKTSDRYYLLPDEDEPYRSCKSKRFITKVMFMCAVSRPMFGSDGQTIFDGKIGIFPFTEQVPAKRKSKNRPRGTLETKPIPSVNKEAMRECLLNQIIPAIKAKWP---ANASKE---IYIQQDNAKPHLTSSDFQFEAAASTDGFKFHLISQPANSPDTNVLDLGFFRAIQSLQDDKLATNIDELLANVWSSFEELTPQTLNKVFLTLQSCLSKILEVHGGNNYKIPHLNKDRLSRTVGLPTSLEVEE 459          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig72212.14891.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A834FTG5_RHOSS6.120e-8043.85Uncharacterized protein n=3 Tax=Rhododendron simsi... [more]
A0A834LPB9_RHOSS7.190e-8044.94Uncharacterized protein n=1 Tax=Rhododendron simsi... [more]
UPI0007F012D11.380e-7744.13uncharacterized protein LOC108203813 n=1 Tax=Daucu... [more]
UPI00200961161.870e-7745.79uncharacterized protein LOC125197723 n=1 Tax=Salvi... [more]
UPI0020091A083.300e-7744.79uncharacterized protein LOC125206097 n=1 Tax=Salvi... [more]
A0A834FW95_RHOSS3.640e-7743.04Uncharacterized protein n=3 Tax=Rhododendron simsi... [more]
A0A452XZT7_AEGTS1.170e-7542.06Uncharacterized protein n=2 Tax=Aegilops tauschii ... [more]
UPI001966F8561.420e-7542.31uncharacterized protein LOC112416713 n=1 Tax=Medic... [more]
UPI00073A4D581.480e-7545.97uncharacterized protein LOC107061740 n=4 Tax=Solan... [more]
UPI002008F3871.980e-7544.78uncharacterized protein LOC125210222 n=2 Tax=Salvi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig72212contigH-elongata_contig72212:18..1066 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score216.9
Seed ortholog evalue1.2e-53
Seed eggNOG ortholog161934.XP_010696339.1
EggNOG OGs2CMKC@1,2QQNW@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorymitochondrion
Exons1
Model size1049
Cds size822
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig72212.14891.1prot_H-elongata_contig72212.14891.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig72212 30..851 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931123.0926008-UTR-H-elongata_contig72212:17..291622931123.0926008-UTR-H-elongata_contig72212:17..29Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig72212 18..29 +
1691679707.455855-UTR-H-elongata_contig72212:17..291691679707.455855-UTR-H-elongata_contig72212:17..29Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig72212 18..29 +
1622931123.1260378-UTR-H-elongata_contig72212:851..10661622931123.1260378-UTR-H-elongata_contig72212:851..1066Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig72212 852..1066 +
1691679707.4797657-UTR-H-elongata_contig72212:851..10661691679707.4797657-UTR-H-elongata_contig72212:851..1066Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig72212 852..1066 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931123.1094615-CDS-H-elongata_contig72212:29..8511622931123.1094615-CDS-H-elongata_contig72212:29..851Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig72212 30..851 +
1691679707.4694788-CDS-H-elongata_contig72212:29..8511691679707.4694788-CDS-H-elongata_contig72212:29..851Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig72212 30..851 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig72212.14891.1

>prot_H-elongata_contig72212.14891.1 ID=prot_H-elongata_contig72212.14891.1|Name=mRNA_H-elongata_contig72212.14891.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=274bp
MFHRNMKKLGVKVIKRFLKPLLTKQGKIDRLRWGRRWVATSAVPVGPRRF
KGMVNVVHIDEKWFFVCKDKQTYYVLDEEPDPGRKVQRKSHILKAVFVGA
VTRPRRNTSSNSDFDGKIGIYPFTHQVRAQRSSRNRAAGTMVTKTIEVTK
ESYKRMLIDRVIPDIKRVFPRPPASASPEDRIVWLQQDNARPYLVNNDSE
LTVTLSSDGWDIRMLNQPANSPDTNILDLGFLNSIQSLQDRTTPKNIDDL
IKVVKDAWEEDSPAVLNRVWLSL*
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mRNA from alignment at H-elongata_contig72212:18..1066+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig72212.14891.1 ID=mRNA_H-elongata_contig72212.14891.1|Name=mRNA_H-elongata_contig72212.14891.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1049bp|location=Sequence derived from alignment at H-elongata_contig72212:18..1066+ (Himanthalia elongata Himel1 dioecious)
CTACCGAAGACAATGTTTCACCGCAACATGAAGAAGCTTGGAGTGAAGGT GATCAAGCGGTTCTTGAAGCCCCTCCTCACGAAGCAGGGTAAGATAGATC GGCTGAGATGGGGTAGGCGGTGGGTTGCGACAAGTGCGGTACCGGTGGGA CCTCGCAGATTTAAGGGGATGGTGAACGTTGTGCACATCGACGAGAAGTG GTTTTTCGTCTGCAAAGACAAGCAGACGTACTACGTGCTCGACGAGGAAC CCGACCCGGGCCGGAAGGTTCAACGCAAGAGCCACATACTCAAGGCGGTG TTCGTGGGAGCTGTCACGCGACCGAGGCGCAACACCTCCAGCAACTCCGA CTTCGACGGGAAGATTGGAATTTACCCCTTCACGCATCAAGTGCGAGCCC AGCGAAGCAGCCGGAACAGGGCCGCTGGCACAATGGTGACAAAGACGATA GAGGTCACCAAGGAGAGCTACAAGAGGATGCTCATCGACCGCGTCATCCC CGACATCAAGAGGGTGTTCCCCCGTCCTCCGGCCAGCGCCAGTCCGGAAG ACAGGATCGTTTGGCTGCAGCAGGATAACGCCCGCCCATACCTGGTCAAC AACGACTCAGAACTCACGGTTACATTGTCGTCAGACGGGTGGGACATTCG GATGCTTAACCAGCCGGCCAACAGCCCCGACACGAACATCCTTGATTTGG GATTCTTGAACTCCATCCAGTCCCTACAGGACCGCACGACCCCGAAGAAC ATCGACGACCTGATCAAGGTAGTGAAGGACGCGTGGGAGGAAGACTCGCC AGCGGTGCTGAACCGGGTGTGGCTGAGCCTCTAGGCCTGCCTGGAGCAGA TCATGCTTGCCGGAGGGGACAATAGCTACAAGCTGCCGCACTTGCACAAA GGGAGGCTCGAAACCACCGGTACGCTGCCGTGGCAGCTAGAGTGCAAGGA GGAGGCATGGGCCATGGGTTCTTCGGCGCTGGTTGAGTTGGAGGCCGAGG TGGTGGCGGAAAGAGCGGCAAGGGCGGCGGGGATCACAACGGCAGGTGG
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Coding sequence (CDS) from alignment at H-elongata_contig72212:18..1066+

>mRNA_H-elongata_contig72212.14891.1 ID=mRNA_H-elongata_contig72212.14891.1|Name=mRNA_H-elongata_contig72212.14891.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1644bp|location=Sequence derived from alignment at H-elongata_contig72212:18..1066+ (Himanthalia elongata Himel1 dioecious)
ATGTTTCACCGCAACATGAAGAAGCTTGGAGTGAAGGTGATCAAGCGGTT
CTTGAAGCCCCTCCTCACGAAGCAGGGTAAGATAGATCGGCTGAGATGGG
GTAGGCGGTGGGTTGCGACAAGTGCGGTACCGGTGGGACCTCGCAGATTT
AAGGGGATGGTGAACGTTGTGCACATCGACGAGAAGTGGTTTTTCGTCTG
CAAAGACAAGCAGACGTACTACGTGCTCGACGAGGAACCCGACCCGGGCC
GGAAGGTTCAACGCAAGAGCCACATACTCAAGGCGGTGTTCGTGGGAGCT
GTCACGCGACCGAGGCGCAACACCTCCAGCAACTCCGACTTCGACGGGAA
GATTGGAATTTACCCCTTCACGCATCAAGTGCGAGCCCAGCGAAGCAGCC
GGAACAGGGCCGCTGGCACAATGGTGACAAAGACGATAGAGGTCACCAAG
GAGAGCTACAAGAGGATGCTCATCGACCGCGTCATCCCCGACATCAAGAG
GGTGTTCCCCCGTCCTCCGGCCAGCGCCAGTCCGGAAGACAGGATCGTTT
GGCTGCAGCAGGATAACGCCCGCCCATACCTGGTCAACAACGACTCAGAA
CTCACGGTTACATTGTCGTCAGACGGGTGGGACATTCGGATGCTTAACCA
GCCGGCCAACAGCCCCGACACGAACATCCTTGATTTGGGATTCTTGAACT
CCATCCAGTCCCTACAGGACCGCACGACCCCGAAGAACATCGACGACCTG
ATCAAGGTAGTGAAGGACGCGTGGGAGGAAGACTCGCCAGCGGTGCTGAA
CCGGGTGTGGCTGAGCCTCTAGATGTTTCACCGCAACATGAAGAAGCTTG
GAGTGAAGGTGATCAAGCGGTTCTTGAAGCCCCTCCTCACGAAGCAGGGT
AAGATAGATCGGCTGAGATGGGGTAGGCGGTGGGTTGCGACAAGTGCGGT
ACCGGTGGGACCTCGCAGATTTAAGGGGATGGTGAACGTTGTGCACATCG
ACGAGAAGTGGTTTTTCGTCTGCAAAGACAAGCAGACGTACTACGTGCTC
GACGAGGAACCCGACCCGGGCCGGAAGGTTCAACGCAAGAGCCACATACT
CAAGGCGGTGTTCGTGGGAGCTGTCACGCGACCGAGGCGCAACACCTCCA
GCAACTCCGACTTCGACGGGAAGATTGGAATTTACCCCTTCACGCATCAA
GTGCGAGCCCAGCGAAGCAGCCGGAACAGGGCCGCTGGCACAATGGTGAC
AAAGACGATAGAGGTCACCAAGGAGAGCTACAAGAGGATGCTCATCGACC
GCGTCATCCCCGACATCAAGAGGGTGTTCCCCCGTCCTCCGGCCAGCGCC
AGTCCGGAAGACAGGATCGTTTGGCTGCAGCAGGATAACGCCCGCCCATA
CCTGGTCAACAACGACTCAGAACTCACGGTTACATTGTCGTCAGACGGGT
GGGACATTCGGATGCTTAACCAGCCGGCCAACAGCCCCGACACGAACATC
CTTGATTTGGGATTCTTGAACTCCATCCAGTCCCTACAGGACCGCACGAC
CCCGAAGAACATCGACGACCTGATCAAGGTAGTGAAGGACGCGTGGGAGG
AAGACTCGCCAGCGGTGCTGAACCGGGTGTGGCTGAGCCTCTAG
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