mRNA_H-elongata_contig72029.14879.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig72029.14879.1
Unique NamemRNA_H-elongata_contig72029.14879.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig72029.14879.1 vs. uniprot
Match: D8LIS8_ECTSI (Soluble NSF Attachment Protein (SNAP) Receptor (SNARE) n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIS8_ECTSI)

HSP 1 Score: 187 bits (474), Expect = 1.870e-51
Identity = 116/174 (66.67%), Postives = 127/174 (72.99%), Query Frame = 2 
Query:  743 LKSVGTNGNGND--GGNRGAKGAYEGGGGLVLGKGRGEDWRTSLPRPGQVTSYPDDEQDASAADTPLIATRGTRGQQQHQQMQTQLALGNQSYLESRSEAVQEVEGHIAELGLIFNKLATMLQDQREMVESIHDNVEDAGASVERGHLTLLGTLDSLNSNRRLALSVTGILILF 1258
            LK  G NGNG    GG +GA G       L    G G    + LPRPGQVTSYP+ EQ+ASA DTPLIA +G         MQ QLA GNQ YLESRS AVQEVEGHIAELGLIFNKLATMLQDQREMVES+HDNVEDAG SV +GHL LL T+ SL+SNRRLALSV+GIL+LF
Sbjct:  197 LKPSGENGNGRSSLGGGQGANGXXXXXXXLXXAGGVGG---SPLPRPGQVTSYPEAEQEASA-DTPLIAAQGQXXXXXXXFMQMQLASGNQGYLESRSSAVQEVEGHIAELGLIFNKLATMLQDQREMVESVHDNVEDAGESVNQGHLALLNTMRSLSSNRRLALSVSGILLLF 366
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BLAST of mRNA_H-elongata_contig72029.14879.1 vs. uniprot
Match: A0A835ZBM9_9STRA (Soluble NSF attachment protein receptor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBM9_9STRA)

HSP 1 Score: 120 bits (300), Expect = 9.910e-27
Identity = 62/98 (63.27%), Postives = 76/98 (77.55%), Query Frame = 2 
Query:  968 QHQQMQTQLALGNQSYLESRSEAVQEVEGHIAELGLIFNKLATMLQDQREMVESIHDNVEDAGASVERGHLTLLGTLDSLNSNRRLALSVTGILILFL 1261
            Q Q++Q    +  Q YLE+RS A+QEVE HI ELG +FN+LATMLQDQRE+VES+HDNVEDA A+V RG L LLGTL +L SNR L   V+GIL+LF+
Sbjct:  248 QQQRLQQAQLIPEQGYLEARSTAMQEVESHILELGTVFNRLATMLQDQRELVESVHDNVEDAEANVNRGQLALLGTLRALQSNRMLVAKVSGILVLFV 345
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BLAST of mRNA_H-elongata_contig72029.14879.1 vs. uniprot
Match: K0RUC7_THAOC (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RUC7_THAOC)

HSP 1 Score: 94.4 bits (233), Expect = 3.780e-17
Identity = 57/128 (44.53%), Postives = 78/128 (60.94%), Query Frame = 2 
Query:  878 GQVTSYPDDEQDASAADTPLIATRGTRGQQQHQQMQTQLALGNQSYLESRSEAVQEVEGHIAELGLIFNKLATMLQDQREMVESIHDNVEDAGASVERGHLTLLGTLDSLNSNRRLALSVTGILILFL 1261
            G  + YPD     S   TP+   +     QQ  Q Q QL + +Q+YL  R++A+ +VE +I ELG IFNKLA M+ + R+MV+ + DNVEDA A++     TL  TL SL +NR LA  V GIL+LF+
Sbjct:  370 GASSYYPDSHHQPSVPLTPMEIQQ--MESQQGGQQQYQL-IPDQNYLRQRADAMSQVESNIVELGTIFNKLAVMVNEHRDMVQRVEDNVEDANATINLSMATLTDTLQSLQTNRMLAAKVLGILVLFI 494
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BLAST of mRNA_H-elongata_contig72029.14879.1 vs. uniprot
Match: A0A7S2LH53_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LH53_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 1.130e-15
Identity = 51/128 (39.84%), Postives = 76/128 (59.38%), Query Frame = 2 
Query:  878 GQVTSYPDDEQDASAADTPLIATRGTRGQQQHQQMQTQLALGNQSYLESRSEAVQEVEGHIAELGLIFNKLATMLQDQREMVESIHDNVEDAGASVERGHLTLLGTLDSLNSNRRLALSVTGILILFL 1261
            G  +SY  D   + A  TP+   +         QMQ    + +Q YL  R++A+ +VE +I ELG IFNKLA M+ + R+MV+ + DNVEDA +++     TL  TL +L +NR LA+ V GI++LF+
Sbjct:  250 GGASSYYPDSNQSHAPMTPMEIQQMESNMGTQSQMQL---IPDQDYLRQRADAMSQVESNIVELGTIFNKLAVMVNEHRDMVQRVEDNVEDANSNLNLSLATLTDTLQNLQTNRALAMKVLGIVVLFI 374
[Close]
BLAST of mRNA_H-elongata_contig72029.14879.1 vs. uniprot
Match: A0A7S0UK78_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0UK78_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 1.340e-15
Identity = 41/100 (41.00%), Postives = 70/100 (70.00%), Query Frame = 2 
Query:  962 QQQHQQMQTQLALGNQSYLESRSEAVQEVEGHIAELGLIFNKLATMLQDQREMVESIHDNVEDAGASVERGHLTLLGTLDSLNSNRRLALSVTGILILFL 1261
            +Q+  Q Q    + +Q YL+SR++A+++VE +I ELG ++N+LATM+ + ++MV+ + DNV++A + V  G   L+ TL +L SN+ LAL V  IL++F+
Sbjct:    9 EQESGQDQMMQLIPDQDYLQSRADAMEQVESNIVELGAVYNRLATMVHEHKDMVQRVEDNVDEANSMVTMGMNQLVDTLSNLRSNKGLALKVFSILVVFI 108
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BLAST of mRNA_H-elongata_contig72029.14879.1 vs. uniprot
Match: A0A7R9VPH2_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VPH2_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 1.660e-15
Identity = 46/111 (41.44%), Postives = 70/111 (63.06%), Query Frame = 2 
Query:  929 TPLIATRGTRGQQQHQQMQTQLALGNQSYLESRSEAVQEVEGHIAELGLIFNKLATMLQDQREMVESIHDNVEDAGASVERGHLTLLGTLDSLNSNRRLALSVTGILILFL 1261
            TPL   R      Q Q MQ    + +QSYL+ R++A+ +VE +I ELG IFNKLA M+ + R++V+ + DNV+DA  ++      L  TLD+L +NR LAL V  ++++F+
Sbjct:   46 TPLDIQRMEAESGQEQMMQL---IPDQSYLQERADAMTQVESNIVELGTIFNKLAVMVSEHRDLVQRVEDNVDDANDTINLSLAQLTDTLDNLRTNRALALKVFSVIVVFI 153
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BLAST of mRNA_H-elongata_contig72029.14879.1 vs. uniprot
Match: A0A7S0FU02_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FU02_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 3.740e-15
Identity = 45/111 (40.54%), Postives = 69/111 (62.16%), Query Frame = 2 
Query:  929 TPLIATRGTRGQQQHQQMQTQLALGNQSYLESRSEAVQEVEGHIAELGLIFNKLATMLQDQREMVESIHDNVEDAGASVERGHLTLLGTLDSLNSNRRLALSVTGILILFL 1261
            TPL   R      Q Q MQ    + +Q+YL  R++ ++ VE H+ ELG IFNKLA M+ + R+MV+ + DNV+DA  ++      L  TL++L +NR LAL V G++++F+
Sbjct:   16 TPLDIMRMESESGQGQMMQL---IPDQNYLRERADVMETVESHMLELGNIFNKLAVMVNEHRDMVQRVEDNVDDANDTINLSLAQLTDTLENLRTNRALALKVFGVIVVFI 123
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BLAST of mRNA_H-elongata_contig72029.14879.1 vs. uniprot
Match: B8C5I2_THAPS (Syntaxin (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C5I2_THAPS)

HSP 1 Score: 85.5 bits (210), Expect = 6.360e-15
Identity = 47/95 (49.47%), Postives = 63/95 (66.32%), Query Frame = 2 
Query:  977 QMQTQLALGNQSYLESRSEAVQEVEGHIAELGLIFNKLATMLQDQREMVESIHDNVEDAGASVERGHLTLLGTLDSLNSNRRLALSVTGILILFL 1261
            Q Q QL + +Q YL  R++A+ +VE +I ELG IFNKLA M+ + REMV+ + DNVED  A+V     TL  TL  L +NR L + V GIL+LF+
Sbjct:  194 QRQYQL-IPDQDYLRQRADAMTQVESNIVELGTIFNKLAVMVNEHREMVQRVEDNVEDTNANVNLSLATLTDTLRDLQTNRALGMKVLGILVLFI 287
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BLAST of mRNA_H-elongata_contig72029.14879.1 vs. uniprot
Match: A0A7S4VKK9_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VKK9_9STRA)

HSP 1 Score: 86.7 bits (213), Expect = 9.030e-15
Identity = 49/115 (42.61%), Postives = 73/115 (63.48%), Query Frame = 2 
Query:  917 SAADTPLIATRGTRGQQQHQQMQTQLALGNQSYLESRSEAVQEVEGHIAELGLIFNKLATMLQDQREMVESIHDNVEDAGASVERGHLTLLGTLDSLNSNRRLALSVTGILILFL 1261
            S+   PL      R +++  Q QT   + +Q+YL  R++A+  VE +I ELG IFNKLA M+ + REMVE + DNV+DA  ++     TL  TL++L SNR+LA+ + GI+ LF+
Sbjct:  301 SSGGAPLTPLDIQRMEEESGQSQTLQLIPDQNYLRERADAMSTVETNIVELGTIFNKLAVMVGEHREMVERLEDNVDDANQNISLTFNTLTDTLNNLQSNRQLAMKLFGIVALFI 415
[Close]
BLAST of mRNA_H-elongata_contig72029.14879.1 vs. uniprot
Match: A0A662WQG6_9STRA (t-SNARE coiled-coil homology domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WQG6_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 1.020e-14
Identity = 51/133 (38.35%), Postives = 79/133 (59.40%), Query Frame = 2 
Query:  863 SLPRPGQVTSYPDDEQDASAADTPLIATRGTRGQQQHQQMQTQLALGNQSYLESRSEAVQEVEGHIAELGLIFNKLATMLQDQREMVESIHDNVEDAGASVERGHLTLLGTLDSLNSNRRLALSVTGILILFL 1261
            +LPRPG       D  +A+  +T ++    T  Q+Q       +    QSY ESR+EAV ++E HI ++G +F +L+T++ +Q ++V  I DNVE++  +V  G   LL    SL++NR LAL V+ IL+LFL
Sbjct:  120 TLPRPGF------DNGEAANGNTEILPLISTMTQEQ-------IVAEQQSYTESRAEAVTQIESHIVDIGQLFGRLSTLIHEQGDLVRRIDDNVEESLVNVSSGENELLKYFSSLSNNRMLALKVSAILLLFL 239
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig72029.14879.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LIS8_ECTSI1.870e-5166.67Soluble NSF Attachment Protein (SNAP) Receptor (SN... [more]
A0A835ZBM9_9STRA9.910e-2763.27Soluble NSF attachment protein receptor n=1 Tax=Tr... [more]
K0RUC7_THAOC3.780e-1744.53t-SNARE coiled-coil homology domain-containing pro... [more]
A0A7S2LH53_9STRA1.130e-1539.84Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A7S0UK78_9STRA1.340e-1541.00Hypothetical protein n=1 Tax=Pseudo-nitzschia deli... [more]
A0A7R9VPH2_9STRA1.660e-1541.44Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A7S0FU02_9STRA3.740e-1540.54Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]
B8C5I2_THAPS6.360e-1549.47Syntaxin (Fragment) n=1 Tax=Thalassiosira pseudona... [more]
A0A7S4VKK9_9STRA9.030e-1542.61Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A662WQG6_9STRA1.020e-1438.35t-SNARE coiled-coil homology domain-containing pro... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig72029contigH-elongata_contig72029:401..3081 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score158.3
Seed ortholog evalue1.9e-36
Seed eggNOG ortholog2880.D8LIS8
Preferred nameSTX5
KEGG koko:K08490
KEGG Pathwayko04130,map04130
GOsGO:0000003,GO:0000139,GO:0000149,GO:0000278,GO:0000280,GO:0000281,GO:0000902,GO:0000910,GO:0001505,GO:0002164,GO:0002376,GO:0002520,GO:0002790,GO:0003674,GO:0005484,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0005793,GO:0005794,GO:0005798,GO:0005801,GO:0005886,GO:0006810,GO:0006836,GO:0006873,GO:0006875,GO:0006878,GO:0006886,GO:0006887,GO:0006888,GO:0006891,GO:0006900,GO:0006901,GO:0006903,GO:0006904,GO:0006906,GO:0006996,GO:0007030,GO:0007049,GO:0007112,GO:0007140,GO:0007154,GO:0007267,GO:0007268,GO:0007269,GO:0007275,GO:0007276,GO:0007283,GO:0007346,GO:0008104,GO:0008150,GO:0008283,GO:0008361,GO:0009306,GO:0009653,GO:0009791,GO:0009893,GO:0009894,GO:0009896,GO:0009987,GO:0010256,GO:0010604,GO:0012505,GO:0012506,GO:0012507,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0016050,GO:0016079,GO:0016081,GO:0016192,GO:0016197,GO:0016482,GO:0017156,GO:0019222,GO:0019725,GO:0019953,GO:0022402,GO:0022406,GO:0022411,GO:0022412,GO:0022414,GO:0022607,GO:0023052,GO:0023061,GO:0030003,GO:0030097,GO:0030133,GO:0030134,GO:0030135,GO:0030658,GO:0030659,GO:0030660,GO:0030662,GO:0031090,GO:0031201,GO:0031224,GO:0031410,GO:0031982,GO:0031984,GO:0032501,GO:0032502,GO:0032504,GO:0032535,GO:0032940,GO:0032989,GO:0032991,GO:0033036,GO:0033043,GO:0033116,GO:0033206,GO:0034498,GO:0034613,GO:0035166,GO:0035167,GO:0042147,GO:0042175,GO:0042176,GO:0042592,GO:0042802,GO:0042803,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043933,GO:0044085,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044432,GO:0044433,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0045055,GO:0045184,GO:0045732,GO:0045786,GO:0045930,GO:0046903,GO:0046907,GO:0046916,GO:0046983,GO:0047485,GO:0048193,GO:0048194,GO:0048199,GO:0048207,GO:0048208,GO:0048232,GO:0048278,GO:0048280,GO:0048284,GO:0048285,GO:0048308,GO:0048313,GO:0048489,GO:0048513,GO:0048518,GO:0048519,GO:0048523,GO:0048534,GO:0048542,GO:0048569,GO:0048609,GO:0048731,GO:0048732,GO:0048856,GO:0048869,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0051128,GO:0051171,GO:0051173,GO:0051179,GO:0051234,GO:0051246,GO:0051247,GO:0051301,GO:0051321,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0051704,GO:0051726,GO:0055065,GO:0055070,GO:0055076,GO:0055080,GO:0055082,GO:0060255,GO:0060305,GO:0061024,GO:0061025,GO:0061640,GO:0065003,GO:0065007,GO:0065008,GO:0070727,GO:0071702,GO:0071705,GO:0071840,GO:0071944,GO:0080090,GO:0090066,GO:0090114,GO:0090166,GO:0090174,GO:0097479,GO:0097480,GO:0097708,GO:0098588,GO:0098771,GO:0098791,GO:0098796,GO:0098805,GO:0098827,GO:0098916,GO:0099003,GO:0099504,GO:0099536,GO:0099537,GO:0099643,GO:0140013,GO:0140029,GO:0140056,GO:1903008,GO:1903046,GO:1903047,GO:1903358
EggNOG free text desc.vesicle docking
EggNOG OGsKOG0812@1,KOG0812@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04131
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionSoluble NSF Attachment Protein (SNAP) Receptor (SNARE)
Ec32 orthologEc-03_001420.1
Exons4
Model size1323
Cds size309
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig72029.14879.1prot_H-elongata_contig72029.14879.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig72029 1925..3046 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931121.5923326-UTR-H-elongata_contig72029:400..12831622931121.5923326-UTR-H-elongata_contig72029:400..1283Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig72029 401..1283 +
1691679707.0296104-UTR-H-elongata_contig72029:400..12831691679707.0296104-UTR-H-elongata_contig72029:400..1283Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig72029 401..1283 +
1622931121.6142652-UTR-H-elongata_contig72029:1828..19241622931121.6142652-UTR-H-elongata_contig72029:1828..1924Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig72029 1829..1924 +
1691679707.0539253-UTR-H-elongata_contig72029:1828..19241691679707.0539253-UTR-H-elongata_contig72029:1828..1924Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig72029 1829..1924 +
1622931121.7749665-UTR-H-elongata_contig72029:3046..30811622931121.7749665-UTR-H-elongata_contig72029:3046..3081Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig72029 3047..3081 +
1691679707.1077077-UTR-H-elongata_contig72029:3046..30811691679707.1077077-UTR-H-elongata_contig72029:3046..3081Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig72029 3047..3081 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931121.6352072-CDS-H-elongata_contig72029:1924..19541622931121.6352072-CDS-H-elongata_contig72029:1924..1954Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig72029 1925..1954 +
1691679707.0692124-CDS-H-elongata_contig72029:1924..19541691679707.0692124-CDS-H-elongata_contig72029:1924..1954Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig72029 1925..1954 +
1622931121.6570816-CDS-H-elongata_contig72029:2370..24891622931121.6570816-CDS-H-elongata_contig72029:2370..2489Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig72029 2371..2489 +
1691679707.0850072-CDS-H-elongata_contig72029:2370..24891691679707.0850072-CDS-H-elongata_contig72029:2370..2489Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig72029 2371..2489 +
1622931121.7525792-CDS-H-elongata_contig72029:2886..30461622931121.7525792-CDS-H-elongata_contig72029:2886..3046Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig72029 2887..3046 +
1691679707.0997636-CDS-H-elongata_contig72029:2886..30461691679707.0997636-CDS-H-elongata_contig72029:2886..3046Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig72029 2887..3046 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig72029.14879.1

>prot_H-elongata_contig72029.14879.1 ID=prot_H-elongata_contig72029.14879.1|Name=mRNA_H-elongata_contig72029.14879.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=103bp
MQTQLALGNQSYLESRSEAVQEVEGHIAELGLIFNKLATMLQDQREMVES
IHDNVEDAGASVERGHLTLLGTLDSLNSNRRLALSVTGILILFLLFFFVF
VA*
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mRNA from alignment at H-elongata_contig72029:401..3081+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig72029.14879.1 ID=mRNA_H-elongata_contig72029.14879.1|Name=mRNA_H-elongata_contig72029.14879.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2681bp|location=Sequence derived from alignment at H-elongata_contig72029:401..3081+ (Himanthalia elongata Himel1 dioecious)
CCCTGCTTTATGGGGAACTATCTCTCAAGACGTTTATTTATCTGCCCAGT
ACACCACGAAAAACCTTTGATTGACAAGTGCGTATAGTATAGTACAGTAT
AGTATAGTAGATTTGGAATGGGATGGAATGGAATGATATGAAATTATATG
GTATGGTTGAGATCCGATCGGTTAATTTGAAGAATGCACACACTATATGG
TATGGTTGAGATCCAGTAGACCTAGAAGGATCTAATCGTCTAGTTTTATG
TATATGTCCAGTACTATACTATAGAGGAGAATTTCGCGCGTTCGCTGTTT
CATTCACCGATCACTTGACTTGAACCCTTTTGTGACCCCGCTACAAGTAT
GCTTCGGTTCTTGGAGTATAGTATAGTATATTTGGAATGGGATGGAATTA
TGTGGTATGGTATAATATGGTTGATATCCGATCGGTTAGGTGTGGATGTT
CGGAGGGTTGGAATGAGTTCAAGTTTTTTTAATAACGCGCACATACACAC
ACGATCAATACGAGTGGCATAGAAGGACTAGGACGACAGGGCCGGATTGC
GCGGTTATGTGCAATTTAATAAATACACACGCACACAAACAAATCATGGA
CACACACACCTCAAAATGACTCCGGTGGATATCCCCACGCCCTCGGTGAT
TGTTCTCTCTCTCTCTCCGATATGGACATGGGCATGGACTACTATCAGGT
ATCTCACCGATAAAGCAGATCGAAAATGGAAACGGGACAAGATTGAAATC
CGTTGGGACGAACGGCAACGGCAACGACGGCGGCAACAGAGGGGCCAAAG
GGGCGTACGAGGGCGGGGGGGGCTTGGTGTTGGGGAAAGGACGCGGGGAA
GATTGGCGGACGTCGTTACCACGACCGGGTCAGGTGGGAGAACTCGGCAC
GTGGACGACTGTGCCTTTGATGGGGTGGGGTGTAAGTAAATATGGGTTGG
GGTAAGCGCGGCAACGCTTGGAGCGGTTGTTGCTCCGCGGCGTTATGTGG
TGGGTGGAGGACGGAGAAGAGGGCGAGAGTTGCTGCGGCATGGCATGAAC
CGACGTTCTGACCTTTGCCAGTATCTTTTTGACGACAAAACGAGGGCGAG
GATCATACTGCGGGGAGAAAATGTTGCGAGAGAAGTTGGATCCATGCTCC
TGTTTTGCCGAGAGTTTTCCCCCTCCAGTGACTTTTCCGCCCCCCCCCCC
CCCCCCCCCCTTCCCCCCCTGTTGTCTTTTTTTCCTGTTCCACAACCTGC
NNNNNNNNNNGGGGGGGAAGTTGGGGGGGGGGAGTGGGGTCCTGTCTCCG
TTTTTCCGGGGTGTTTTCCCCCCCCCGTCGCTTTCCGCCCCCCCCCCCCC
CCCCGCCAGTGTTTTTGTTTTGTTTTGATTGGCCAAGCACTACCCCCGCA
CCCGCCCCTTTGTTTTCTTCTCCGGCAGGTGACGTCATATCCCGATGATG
AACAAGATGCCTCCGCCGCGGACACACCTTTAATCGCGACGCGAGGGACG
CGGGGACAGCAACAGCATCAACAGATGCAGACGCAGCTAGCATTGGGGAA
TCAGGTCCGTCATGCGCGTAAAACGACTTTTTGAGTGTTGTATTTCAGTA
CACAGTACTAAGGTAGGTGGATCCCTTCAAGACCCCTCCCATCCCCTCCC
CGAACTCTATTAGCCCCCTCTGCTCGCTGGGCCGGGGGAAAGGGTTAAAA
TGTCCCTCCCTACTGTACCAAGGGAGGGGCTGAGCGCGCCACATATTGCA
GTACATCCCTATTAAGCTATTACTAGTGGAACTCCCGAGATGGTGTTTGG
TCGAACTCCTTCAAAAGCAGACCCTCGTCTTTTTTCTTCCTAAAAAAACA
TATGAAATCATTCCAACCCTTCGAACATCCACGCTTTCTTAACACCATAT
GTTGTGTTGTGGTGGTTGTTTGTGTTGGGGGGGTGGGGGTGCTTGTTTCA
CGTACTTGGCATTTAATCAGAGTTACCTGGAGTCGCGATCGGAAGCCGTA
CAAGAGGTTGAGGGGCACATCGCTGAGCTTGGACTCATCTTCAACAAGCT
GGCTACCATGCTCCAAGATCAAAGAGAAATGGTTGAAAGGTGCGCGTCCC
CCCGTTTTTGCCCTTCTCTGAAAATATCGATAATAGTCGAGAATAGACTA
GTCTAGTCTATTGTAGATCTGTGACGGGAGCGGCAGGAAAGACTTTGGGA
GAGGCGGGGCCAGACGGGCGCGTCTCACCTCAGGTGCTCTTGTTCATCGC
CATCTGTTAATAGTATTCCTATCCCCGTTAGTCGAGTAAAATCAGCTCGG
CCGCCGCTATTAGTAGTGTCTCTTCATCCTTCATCATCCAACCACCTTCT
TCGAGGTGACACGCACTCGTTCAACTCCGATTGGATTCACTCGAGCACTT
ACCTCGGAGACGATCCCCCCCCAAATCCCCTCCCTCTCTTCGCCGTTTTG
TTGTTTTTGCTTTTTGTTGTTGTTTTTGTTGTGAAGTATTCACGACAACG
TGGAGGACGCGGGAGCTTCCGTGGAGCGGGGCCATCTGACGCTGCTTGGC
ACACTCGACTCGCTCAACAGTAACCGACGGCTTGCACTTTCTGTAACGGG
GATTTTGATTTTGTTTTTGTTGTTCTTCTTTGTCTTCGTCGCTTGATGTC
TCCTGCCCCCCCCCCCCCCCCCCCCCCCCCC
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Coding sequence (CDS) from alignment at H-elongata_contig72029:401..3081+

>mRNA_H-elongata_contig72029.14879.1 ID=mRNA_H-elongata_contig72029.14879.1|Name=mRNA_H-elongata_contig72029.14879.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=618bp|location=Sequence derived from alignment at H-elongata_contig72029:401..3081+ (Himanthalia elongata Himel1 dioecious)
ATGCAGACGCAGCTAGCATTGGGGAATCAGATGCAGACGCAGCTAGCATT
GGGGAATCAGAGTTACCTGGAGTCGCGATCGGAAGCCGTACAAGAGGTTG
AGGGGCACATCGCTGAGCTTGGACTCATCTTCAACAAGCTGGCTACCATG
CTCCAAGATCAAAGAGAAATGGTTGAAAGAGTTACCTGGAGTCGCGATCG
GAAGCCGTACAAGAGGTTGAGGGGCACATCGCTGAGCTTGGACTCATCTT
CAACAAGCTGGCTACCATGCTCCAAGATCAAAGAGAAATGGTTGAAAGTA
TTCACGACAACGTGGAGGACGCGGGAGCTTCCGTGGAGCGGGGCCATCTG
ACGCTGCTTGGCACACTCGACTCGCTCAACAGTAACCGACGGCTTGCACT
TTCTGTAACGGGGATTTTGATTTTGTTTTTGTTGTTCTTCTTTGTCTTCG
TCGCTTGATATTCACGACAACGTGGAGGACGCGGGAGCTTCCGTGGAGCG
GGGCCATCTGACGCTGCTTGGCACACTCGACTCGCTCAACAGTAACCGAC
GGCTTGCACTTTCTGTAACGGGGATTTTGATTTTGTTTTTGTTGTTCTTC
TTTGTCTTCGTCGCTTGA
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