mRNA_H-elongata_contig71900.14868.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig71900.14868.1 vs. uniprot
Match: D7G879_ECTSI (Flagellar associated protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G879_ECTSI) HSP 1 Score: 228 bits (582), Expect = 5.790e-70 Identity = 124/137 (90.51%), Postives = 131/137 (95.62%), Query Frame = 1
Query: 7 QALEEQNLFFIENSQETEHALDELKQNFSKVQNTMDTKTQALRSNIRELVKSIEVEEAKVEQLKKKIAASTGETLDRQEELLRQLNKEVKHVYERCGFDASSSPTTLYMLSDLEARLEDLLSNIAHMPEEYVAKAEK 417
QALEEQNLFFI+NSQETEHALDELKQNF KVQ TMDTKTQALRSNIRELV SI+VEEAK EQL+K+IAASTG+TLDRQEELL+QLNKEVKHVYERCGFDASSSPTTLYMLSDLEARLEDLLS+I MPEEYVAKAEK
Sbjct: 339 QALEEQNLFFIQNSQETEHALDELKQNFGKVQKTMDTKTQALRSNIRELVDSIDVEEAKAEQLRKRIAASTGDTLDRQEELLKQLNKEVKHVYERCGFDASSSPTTLYMLSDLEARLEDLLSDIGQMPEEYVAKAEK 475
BLAST of mRNA_H-elongata_contig71900.14868.1 vs. uniprot
Match: A0A836CAG4_9STRA (Flagellar associated protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAG4_9STRA) HSP 1 Score: 166 bits (419), Expect = 5.060e-46 Identity = 96/144 (66.67%), Postives = 114/144 (79.17%), Query Frame = 1
Query: 7 QALEEQNLFFIENSQETEHALDELKQNFSKVQNTMDTKTQALRSNIRELVKSIEVEEAKVEQLKKKIAASTGET-------LDRQEELLRQLNKEVKHVYERCGFDASSSPTTLYMLSDLEARLEDLLSNIAHMPEEYVAKAEK 417
QALEEQNLF I+NSQETEHAL+ELK F + Q +MDTKT ALRSNI +LV SIE E AK EQL+K++ A+T T L +QEELLRQL+ +V+ VYERCGF+A S+PTTL+ML +LE+RLEDLLS IA MPEEYV KAEK
Sbjct: 329 QALEEQNLFLIQNSQETEHALEELKATFREAQRSMDTKTAALRSNIGDLVGSIEEERAKAEQLRKRMCATTNTTTTGDSFTLVQQEELLRQLHGKVREVYERCGFEAGSNPTTLFMLGELESRLEDLLSAIAQMPEEYVVKAEK 472
BLAST of mRNA_H-elongata_contig71900.14868.1 vs. uniprot
Match: A0A7S2XXP3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXP3_9STRA) HSP 1 Score: 151 bits (382), Expect = 8.050e-43 Identity = 86/136 (63.24%), Postives = 104/136 (76.47%), Query Frame = 1
Query: 10 ALEEQNLFFIENSQETEHALDELKQNFSKVQNTMDTKTQALRSNIRELVKSIEVEEAKVEQLKKKIAASTGETLDRQEELLRQLNKEVKHVYERCGFDASSSPTTLYMLSDLEARLEDLLSNIAHMPEEYVAKAEK 417
ALEEQNLF I+NSQETEHAL+ELKQNF + MD KT AL+ NI EL IE EEAKV QL+++I S G T RQEELL QLN++VK VY+RCGF+A S+P TL+MLS+LE+RLEDLL I +M +V +AEK
Sbjct: 75 ALEEQNLFLIQNSQETEHALEELKQNFRDTKQKMDEKTAALKHNIDELQTQIESEEAKVNQLERRIRTSAGNTQGRQEELLHQLNEKVKEVYQRCGFEAGSNPQTLFMLSELESRLEDLLCAIDNMDVNHVKRAEK 210
BLAST of mRNA_H-elongata_contig71900.14868.1 vs. uniprot
Match: A0A397CY82_9STRA (Uncharacterized protein n=7 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397CY82_9STRA) HSP 1 Score: 140 bits (353), Expect = 3.250e-38 Identity = 78/136 (57.35%), Postives = 104/136 (76.47%), Query Frame = 1
Query: 10 ALEEQNLFFIENSQETEHALDELKQNFSKVQNTMDTKTQALRSNIRELVKSIEVEEAKVEQLKKKIAASTGETLDRQEELLRQLNKEVKHVYERCGFDASSSPTTLYMLSDLEARLEDLLSNIAHMPEEYVAKAEK 417
ALEE NLF I+NSQETE +L+ELKQN+ + + M+ KTQ L+ NI +L I VE+AK L+++ A TGE + QE++L++L+ +V VY+RCGF+A S+P TL+ML+DLEARLEDLLS I HMPE+YV KAEK
Sbjct: 100 ALEESNLFLIQNSQETEQSLEELKQNYRETKKKMNKKTQLLKQNIDDLKDQIGVEDAKANHLRQRAQAGTGENV--QEKMLKELHDKVLVVYQRCGFEADSNPNTLFMLTDLEARLEDLLSAIEHMPEDYVVKAEK 233
BLAST of mRNA_H-elongata_contig71900.14868.1 vs. uniprot
Match: K3WPK6_GLOUD (DUF4200 domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WPK6_GLOUD) HSP 1 Score: 142 bits (358), Expect = 1.630e-37 Identity = 83/136 (61.03%), Postives = 98/136 (72.06%), Query Frame = 1
Query: 10 ALEEQNLFFIENSQETEHALDELKQNFSKVQNTMDTKTQALRSNIRELVKSIEVEEAKVEQLKKKIAASTGETLDRQEELLRQLNKEVKHVYERCGFDASSSPTTLYMLSDLEARLEDLLSNIAHMPEEYVAKAEK 417
ALEE NLF I+NSQETE L+ELKQNF TMD KTQAL+ NI EL IE EE K QL+++ TGE QE +L++L V VY+RCGF+A ++ +TLYML+DLEARLEDLLS I MPEEYVAKAEK
Sbjct: 282 ALEESNLFLIQNSQETEQTLEELKQNFRXXXKTMDRKTQALKQNIDELQLQIEQEETKANQLRQRSQGGTGENA--QERMLKELQDRVLEVYKRCGFEAETNSSTLYMLTDLEARLEDLLSAIEQMPEEYVAKAEK 415
BLAST of mRNA_H-elongata_contig71900.14868.1 vs. uniprot
Match: A0A024UA34_9STRA (DUF4200 domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UA34_9STRA) HSP 1 Score: 142 bits (359), Expect = 2.240e-37 Identity = 79/136 (58.09%), Postives = 105/136 (77.21%), Query Frame = 1
Query: 10 ALEEQNLFFIENSQETEHALDELKQNFSKVQNTMDTKTQALRSNIRELVKSIEVEEAKVEQLKKKIAASTGETLDRQEELLRQLNKEVKHVYERCGFDASSSPTTLYMLSDLEARLEDLLSNIAHMPEEYVAKAEK 417
ALEE NLF I+NSQETE +L+ELKQN+ + + M+ KTQ L+ NI +L I VE+AK L+++ A TGE + QE+LL++L+++V VY+RCGF+A S+P TL+ML+DLEARLEDLLS I HMPE+YV KAEK
Sbjct: 336 ALEESNLFLIQNSQETEQSLEELKQNYRETKKKMNKKTQVLKQNIDDLKDQIAVEDAKANHLRQRAQAGTGENV--QEKLLKELHEKVLVVYQRCGFEADSNPNTLFMLTDLEARLEDLLSAIEHMPEDYVVKAEK 469
BLAST of mRNA_H-elongata_contig71900.14868.1 vs. uniprot
Match: A0A080ZXZ2_PHYPR (DUF4200 domain-containing protein n=3 Tax=Peronosporaceae TaxID=4777 RepID=A0A080ZXZ2_PHYPR) HSP 1 Score: 139 bits (349), Expect = 1.480e-36 Identity = 79/136 (58.09%), Postives = 99/136 (72.79%), Query Frame = 1
Query: 10 ALEEQNLFFIENSQETEHALDELKQNFSKVQNTMDTKTQALRSNIRELVKSIEVEEAKVEQLKKKIAASTGETLDRQEELLRQLNKEVKHVYERCGFDASSSPTTLYMLSDLEARLEDLLSNIAHMPEEYVAKAEK 417
ALEE NLF I+NSQETE L+ELKQN+ TMD KTQAL+SN+ L + I +EE+K QL+ + TGE QE +L++L V VY+RCGF+A ++ +TLYML+DLEARLEDLLS I MPE+YVAKAEK
Sbjct: 227 ALEESNLFLIQNSQETEQTLEELKQNYRXXXKTMDRKTQALKSNVDGLQQQISIEESKASQLRLRSQGGTGENA--QERMLKELQDRVLEVYKRCGFEAETNSSTLYMLTDLEARLEDLLSAIEQMPEDYVAKAEK 360
BLAST of mRNA_H-elongata_contig71900.14868.1 vs. uniprot
Match: W4GUU7_9STRA (DUF4200 domain-containing protein n=4 Tax=Aphanomyces TaxID=100860 RepID=W4GUU7_9STRA) HSP 1 Score: 140 bits (353), Expect = 1.570e-36 Identity = 78/136 (57.35%), Postives = 104/136 (76.47%), Query Frame = 1
Query: 10 ALEEQNLFFIENSQETEHALDELKQNFSKVQNTMDTKTQALRSNIRELVKSIEVEEAKVEQLKKKIAASTGETLDRQEELLRQLNKEVKHVYERCGFDASSSPTTLYMLSDLEARLEDLLSNIAHMPEEYVAKAEK 417
ALEE NLF I+NSQETE +L+ELKQN+ + + M+ KTQ L+ NI +L I VE+AK L+++ A TGE + QE++L++L+ +V VY+RCGF+A S+P TL+ML+DLEARLEDLLS I HMPE+YV KAEK
Sbjct: 334 ALEESNLFLIQNSQETEQSLEELKQNYRETKKKMNKKTQLLKQNIDDLKDQIGVEDAKANHLRQRAQAGTGENV--QEKMLKELHDKVLVVYQRCGFEADSNPNTLFMLTDLEARLEDLLSAIEHMPEDYVVKAEK 467
BLAST of mRNA_H-elongata_contig71900.14868.1 vs. uniprot
Match: A0A2D4C7Z8_PYTIN (DUF4200 domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C7Z8_PYTIN) HSP 1 Score: 139 bits (351), Expect = 2.700e-36 Identity = 80/136 (58.82%), Postives = 101/136 (74.26%), Query Frame = 1
Query: 10 ALEEQNLFFIENSQETEHALDELKQNFSKVQNTMDTKTQALRSNIRELVKSIEVEEAKVEQLKKKIAASTGETLDRQEELLRQLNKEVKHVYERCGFDASSSPTTLYMLSDLEARLEDLLSNIAHMPEEYVAKAEK 417
ALEE NLF I+NSQETE L+ELKQ++ + + TMD KTQ L++NI EL + I +EEAK QL+ + T E QE +L++L+ V VY+RCGF+A S+ +TLYML+DLEARLEDLLS I MPEEYVAKAEK
Sbjct: 323 ALEESNLFLIQNSQETEQTLEELKQSYRETKKTMDRKTQNLKNNIDELQQQIAIEEAKASQLRHRSHGGTSENA--QERMLKELHDRVLEVYKRCGFEAESNSSTLYMLTDLEARLEDLLSAIEQMPEEYVAKAEK 456
BLAST of mRNA_H-elongata_contig71900.14868.1 vs. uniprot
Match: A0A067CFV5_SAPPC (DUF4200 domain-containing protein n=3 Tax=Saprolegnia TaxID=4769 RepID=A0A067CFV5_SAPPC) HSP 1 Score: 139 bits (350), Expect = 4.040e-36 Identity = 77/136 (56.62%), Postives = 101/136 (74.26%), Query Frame = 1
Query: 10 ALEEQNLFFIENSQETEHALDELKQNFSKVQNTMDTKTQALRSNIRELVKSIEVEEAKVEQLKKKIAASTGETLDRQEELLRQLNKEVKHVYERCGFDASSSPTTLYMLSDLEARLEDLLSNIAHMPEEYVAKAEK 417
ALEE NLF I+NSQETE +L+ELKQN+ + + M+ KTQ L+ NI EL I E+ K L+++ A TGE + QE +L++L+ +V VY+RCGF+A S+P TL+ML+DLEARLEDLLS I HMPE+YV KAEK
Sbjct: 330 ALEESNLFLIQNSQETEQSLEELKQNYRETKKKMNKKTQVLKQNIDELRDQINAEDEKANHLRQRAMAGTGENV--QERMLQELHDKVLEVYQRCGFEADSNPNTLFMLTDLEARLEDLLSAIEHMPEDYVVKAEK 463 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig71900.14868.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig71900.14868.1 >prot_H-elongata_contig71900.14868.1 ID=prot_H-elongata_contig71900.14868.1|Name=mRNA_H-elongata_contig71900.14868.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=139bp MTQALEEQNLFFIENSQETEHALDELKQNFSKVQNTMDTKTQALRSNIREback to top mRNA from alignment at H-elongata_contig71900:175..1231- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig71900.14868.1 ID=mRNA_H-elongata_contig71900.14868.1|Name=mRNA_H-elongata_contig71900.14868.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1057bp|location=Sequence derived from alignment at H-elongata_contig71900:175..1231- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig71900:175..1231- >mRNA_H-elongata_contig71900.14868.1 ID=mRNA_H-elongata_contig71900.14868.1|Name=mRNA_H-elongata_contig71900.14868.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=834bp|location=Sequence derived from alignment at H-elongata_contig71900:175..1231- (Himanthalia elongata Himel1 dioecious)back to top |