mRNA_H-elongata_contig71856.14865.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig71856.14865.1
Unique NamemRNA_H-elongata_contig71856.14865.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig71856.14865.1 vs. uniprot
Match: A0A6H5JZK6_9PHAE (TPT domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JZK6_9PHAE)

HSP 1 Score: 411 bits (1056), Expect = 1.870e-139
Identity = 225/346 (65.03%), Postives = 258/346 (74.57%), Query Frame = 1
Query:   16 LLLLVYLLAPPCFSSDFMTVKRRGKHAKRHERFLMVPSTSRSHTRISDEDGSCLSRGAGSLASASPAAAVFSHLLRGGGTTATSTTNSVSQRKIDADRGMMETARVLGYFALWYALNVWYNIVNKRVLNAIHLPVSIAVLQLGIGSLWVAAQWTLGVRTRPGKLTRSGLSRLTPVAFFHGGGQLATVLSLGAGAVSFTHVVKAMEPFFSALVAAVWFRQVFRWQVYASLVPVVAGVALACAKEINFSWLSFLAAMISNLLFACRSNFSKALMIRPPTQGVSSVSSANLYGLVTLTAFVMFAPVAAIAGWGKWRTTWELALRQGHQGKALALSVLLSGISHYLNNEV 1053
            LLL+V LL  P  S       RRG+ A +HE  L++PST+RS    S       SR   +           + LLRGG     +T +S++    +A   + + ARVLGYF LWYALNVWYNIVNK+VLNA+ LP SIAVLQLGIGSLWV  QW +  RT PGKL  +G +RLTPVAFFHGGGQLATVLSLGAGAVSFTHVVKAMEPFFSALVAAVWFR +FRWQVYASL+PVVAGV+LACAKEINFSW+SFLAAM SNLLFACR+NFSKALM RPP +  +S SSANLYGLVT+ +FV+FAP AA+ GW KW   WE A+  GHQ KAL LSVLLSG+SHYLNNEV
Sbjct:    7 LLLVVSLLISPGLSHTVALDARRGRQAGQHE--LLLPSTARSKLAPS-------SRRINNXXXXXXXXXXXAGLLRGGDGAEPATQSSLTA---EAGSSLKDRARVLGYFGLWYALNVWYNIVNKKVLNALPLPSSIAVLQLGIGSLWVGTQWLVRARTPPGKLAATGAARLTPVAFFHGGGQLATVLSLGAGAVSFTHVVKAMEPFFSALVAAVWFRHIFRWQVYASLLPVVAGVSLACAKEINFSWVSFLAAMASNLLFACRANFSKALMTRPPFEDGASTSSANLYGLVTIVSFVVFAPFAALTGWSKWGPAWESAMENGHQAKALVLSVLLSGVSHYLNNEV 340          
BLAST of mRNA_H-elongata_contig71856.14865.1 vs. uniprot
Match: A0A4D9D5R1_9STRA (TPT domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D5R1_9STRA)

HSP 1 Score: 269 bits (687), Expect = 6.720e-84
Identity = 139/244 (56.97%), Postives = 180/244 (73.77%), Query Frame = 1
Query:  322 TARVLGYFALWYALNVWYNIVNKRVLNAIHLPVSIAVLQLGIGSLWVAAQWTLGVRTRPGKLTRSGLSRLTPVAFFHGGGQLATVLSLGAGAVSFTHVVKAMEPFFSALVAAVWFRQVFRWQVYASLVPVVAGVALACAKEINFSWLSFLAAMISNLLFACRSNFSKALMIRPPTQGVSSVSSANLYGLVTLTAFVMFAPVAAIAGWGKWRTTWELALRQGHQGKALALSVLLSGISHYLNNEV 1053
            T   L YFALW+ALNV+YNIVNKRVLN + LP ++A  QLGIG+++V+  W L VR  P +++ +GL  L  +AF+HG GQL TVLSLGA AVSFTH+VKA+EPFFSALVAAV F+QVF+ QVY SL+PVV+GVA+ACA +++F WL+FL AM SNL FA R+NFSK  + R   +G SS+S AN+YGLVT+ AF +  P+  +     WR +W +A  +  +G  L   +LLSG+ HYLNNEV
Sbjct:  101 TVLTLSYFALWFALNVYYNIVNKRVLNTLPLPFTVATAQLGIGAVYVSLSWLLRVRASP-RISTTGLKDLLSIAFYHGSGQLFTVLSLGAAAVSFTHIVKALEPFFSALVAAVCFKQVFKPQVYLSLLPVVSGVAVACANDVSFGWLAFLTAMASNLAFALRANFSKGALFRYRKEGKSSMSPANVYGLVTILAFFLLLPLTCLWEGVDWRPSWRVATEK-IEGTTLVHQLLLSGLFHYLNNEV 342          
BLAST of mRNA_H-elongata_contig71856.14865.1 vs. uniprot
Match: A0A836CFX7_9STRA (Plastidic triose-phosphate/phosphate translocator n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFX7_9STRA)

HSP 1 Score: 256 bits (653), Expect = 6.170e-79
Identity = 144/250 (57.60%), Postives = 175/250 (70.00%), Query Frame = 1
Query:  319 ETARVLGYFALWYALNVWYNIVNKRVLNAIHLPVSIAVLQLGIGSLWVAAQWTLGVRTRPGKLTRSGLSRLTPVAFFHGGGQLATVLSLGAGAVSFTHVVKAMEPFFSALVAAVWFRQVFRWQVYASLVPVVAGVALACAKEINFSWLSFLAAMISNLLFACRSNFSKALMIRPPTQGVSSVSSANLYGLVTLTAFVMFAPVAAIAGWGKWRTTW-----ELALRQGHQGKALALSVLLSGISHYLNNEV 1053
            + A+V  YFALWYALN+ YNI NKR LNA+ LP ++   QLG G++WV AQW L +R  P  L R  L R+ PVA FHGGGQ+ATVLSLGAGAVSFTH+VKA EP FSALVAAV F QVF+ QVYA+L+PVV GVA+ACAKE+NFSW+SF+AAM SNL FA R+N+SK LM +   +   +V  ANLY L+T+ AFV+  P+A  A        W     +LA         LA  V LSG++HYLNNEV
Sbjct:   88 QKAKVAFYFALWYALNIAYNIANKRALNALPLPWTVGTAQLGAGAVWVGAQWLLRIRAAP-VLERGALRRVLPVAAFHGGGQVATVLSLGAGAVSFTHIVKAAEPLFSALVAAVAFGQVFKPQVYAALLPVVGGVAVACAKELNFSWVSFVAAMSSNLFFALRANYSKVLMQKRLGR---NVEPANLYALITMVAFVLCLPLALAAEGALVGPAWGQGVKDLAGVVARPRAQLAWLVALSGLTHYLNNEV 333          
BLAST of mRNA_H-elongata_contig71856.14865.1 vs. uniprot
Match: A0A7S4DBS7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DBS7_HETAK)

HSP 1 Score: 253 bits (645), Expect = 3.490e-78
Identity = 136/247 (55.06%), Postives = 173/247 (70.04%), Query Frame = 1
Query:  313 MMETARVLGYFALWYALNVWYNIVNKRVLNAIHLPVSIAVLQLGIGSLWVAAQWTLGVRTRPGKLTRSGLSRLTPVAFFHGGGQLATVLSLGAGAVSFTHVVKAMEPFFSALVAAVWFRQVFRWQVYASLVPVVAGVALACAKEINFSWLSFLAAMISNLLFACRSNFSKALMIRPPTQGVSSVSSANLYGLVTLTAFVMFAPVAAIAGWGKWRTTWELALRQGHQGKALALSVLLSGISHYLNNEV 1053
            ++ T +VLGYF LWY LN+ YNIVNK+VLN   +P ++A +QLGIG L+  A W   +R  P +L+   +  + PVAF+H  GQL TV+SL AGAVSF H+VKA+EPFFSALVAAV+ +Q F+ QVYA+LVPVVAGVALAC  E++FSW SF AAM SN  FACR+NFSK LM         ++S+ANLY +VTL AF++ AP+A  A        W  A+  G   K LA ++LLSG+ HYLNNEV
Sbjct:   50 VLHTLKVLGYFGLWYVLNIAYNIVNKKVLNKFQVPWTVAAVQLGIGGLYALASWATPLRAAP-QLSVKSMKAIAPVAFYHSSGQLLTVVSLFAGAVSFAHIVKALEPFFSALVAAVFLKQYFKPQVYATLVPVVAGVALACYSEVDFSWASFAAAMGSNAAFACRANFSKHLM---GADLGKNMSAANLYAVVTLGAFLLLAPLALAAEGAALPREWARAVAAGITEKKLATNILLSGLFHYLNNEV 292          
BLAST of mRNA_H-elongata_contig71856.14865.1 vs. uniprot
Match: A0A7S4NB18_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4NB18_9STRA)

HSP 1 Score: 217 bits (553), Expect = 6.270e-64
Identity = 121/261 (46.36%), Postives = 168/261 (64.37%), Query Frame = 1
Query:  277 SVSQRKIDADRGMMETARVLGYFALWYALNVWYNIVNKRVLNAIHLPVSIAVLQLGIGSLWVAAQWTLGVRTRPGKLTRSGLSRLTPVAFFHGGGQLATVLSLGAGAVSFTHVVKAMEPFFSALVAAVWFRQVFRWQVYASLVPVVAGVALACAKEINFSWLSFLAAMISNLLFACRSNFSKALMIRPPTQGVSSVSSANLYGLVTLTAFVMFAPVAAIAGWGKWRTTWELALRQGHQGKA--LALSVLLSGISHYLNNEV 1053
            S+  R  D + G++   ++ GYF LWYALNV YNI+NK+VLN +  P+++  +Q GIG+L+ A  W L +R  P +LT  G   +  V F+H  GQL +++SLGAG VSFTH+VKA+EPFFSALV+A+ F    + QVYA+L+PVV GV+ AC KE +FSWL+F  AM SN+ FA R+  SK+ M     + ++SV   NL+GLVT  AF +  P   +     +   W  A+ +G       LA S++LSG+ HYLNNEV
Sbjct:   70 SLVPRGGDGEIGLLHRLKIGGYFGLWYALNVIYNIINKKVLNVVPAPLTVGSIQFGIGALYAAILWALSIRPAP-RLTSKGRDSVWSVGFYHSAGQLLSMISLGAGPVSFTHIVKALEPFFSALVSALVFGTWMKPQVYATLIPVVGGVSYACLKERSFSWLAFWTAMGSNVAFALRAVMSKSAMTSYIGENINSV---NLFGLVTWAAFFISIPTFLLGEGISFLELWSKAIGEGSDTTMPQLARSLVLSGLFHYLNNEV 326          
BLAST of mRNA_H-elongata_contig71856.14865.1 vs. uniprot
Match: A0A7S1FZ62_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FZ62_9STRA)

HSP 1 Score: 216 bits (550), Expect = 1.310e-63
Identity = 116/253 (45.85%), Postives = 166/253 (65.61%), Query Frame = 1
Query:  298 DADRGMMETARVLGYFALWYALNVWYNIVNKRVLNAIHLPVSIAVLQLGIGSLWVAAQWTLGVRTRPGKLTRSGLSRLTPVAFFHGGGQLATVLSLGAGAVSFTHVVKAMEPFFSALVAAVWFRQVFRWQVYASLVPVVAGVALACAKEINFSWLSFLAAMISNLLFACRSNFSKALMIRPPTQGVSSVSSANLYGLVTLTAFVMFAPVAAIAGWGKWRTTWELALRQ-GHQGKALALSVLLSGISHYLNNEV 1053
            DA   +    +V  YFALWY LN+ YNI NK++LNA+ LP+++  LQLG+GS +VA  W  G+R  P  LT +G   L  V F+H  GQL +++SLGAGAVSFTH+VKA+EPFFSA V+A++  +  R QVYA+L+PVV GVA AC  +++F+WL F +AM SNL+FA R+  SKA M  P  +     +  N++G+VT+ +F++  PVA ++ W  + + +  A+   G         + +SG+ HYLNNEV
Sbjct:   72 DATPTIPPALKVTVYFALWYILNILYNIQNKKILNALPLPLAVGTLQLGVGSTFVAMLWATGLRKAP-ILTPNGKGALKKVGFYHSAGQLLSMVSLGAGAVSFTHIVKALEPFFSAAVSALYLGKWMRPQVYAALIPVVGGVATACFSDLSFTWLGFYSAMGSNLMFALRAVMSKAAMTSPIGE---ETTPTNVFGVVTIYSFLLALPVAFLSDWSSFGSLFRDAITSTGKSNLQFVKDICVSGLVHYLNNEV 320          
BLAST of mRNA_H-elongata_contig71856.14865.1 vs. uniprot
Match: A0A1E7F950_9STRA (TPT-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F950_9STRA)

HSP 1 Score: 213 bits (543), Expect = 2.570e-63
Identity = 114/246 (46.34%), Postives = 159/246 (64.63%), Query Frame = 1
Query:  316 METARVLGYFALWYALNVWYNIVNKRVLNAIHLPVSIAVLQLGIGSLWVAAQWTLGVRTRPGKLTRSGLSRLTPVAFFHGGGQLATVLSLGAGAVSFTHVVKAMEPFFSALVAAVWFRQVFRWQVYASLVPVVAGVALACAKEINFSWLSFLAAMISNLLFACRSNFSKALMIRPPTQGVSSVSSANLYGLVTLTAFVMFAPVAAIAGWGKWRTTWELALRQGHQGKALALSVLLSGISHYLNNEV 1053
            M+   + GYFA WYALNV YNI+NK+VLN +  P+ +  +Q GIG+L+ A  W    R  P KLT  G   +  V  +H  GQL+T++SL AG VSF+H+VKA+EPFFSA+V+  +F    + QVYA+L+PVV GV  AC KE+NFSWL+F AAM SNL FA R+  SK+ +      G +++++ N++GLVT+TAF++  PVA I     +   W  A+ Q         ++ +SG+ HYLNNEV
Sbjct:    1 MQRLEIGGYFAAWYALNVVYNIINKKVLNVLPAPLIVGSIQFGIGALYCALVWIFKFRPFP-KLTAGGTKAVASVGAYHMLGQLSTMISLQAGPVSFSHIVKAVEPFFSAIVSGFYFNSWMKPQVYATLIPVVGGVGYACLKELNFSWLAFGAAMASNLFFALRAVLSKSALQSGKATG-TNLTAPNMFGLVTVTAFLLSIPVALIREGSGFSALWLAAMEQVESKSQFVRAIFISGLFHYLNNEV 244          
BLAST of mRNA_H-elongata_contig71856.14865.1 vs. uniprot
Match: B7G197_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G197_PHATC)

HSP 1 Score: 209 bits (533), Expect = 1.120e-60
Identity = 118/251 (47.01%), Postives = 162/251 (64.54%), Query Frame = 1
Query:  301 ADRGMMETARVLGYFALWYALNVWYNIVNKRVLNAIHLPVSIAVLQLGIGSLWVAAQWTLGVRTRPGKLTRSGLSRLTPVAFFHGGGQLATVLSLGAGAVSFTHVVKAMEPFFSALVAAVWFRQVFRWQVYASLVPVVAGVALACAKEINFSWLSFLAAMISNLLFACRSNFSKALMIRPPTQGVSSVSSANLYGLVTLTAFVMFAPVAAIAGWGKWRTTWELALRQGHQGKALALSVLLSGISHYLNNEV 1053
            A   ++ T +V  YFALWYALN+ YNI+NK++LN +  PV++  +Q G+G  +V   W L +R  P  LT  G + +  V F+H  GQLA+++SLGAG VSFTH+VKA+EPFFSA+V+A+ F    + QVYA+L+PVV GV  AC KE +FSWL+F  AM SNL FA R+  SK  M      G +++SS N++ +VTL AFV   P+A +     + T W  AL Q      L  ++ +SG+ HYLNNEV
Sbjct:   99 APHPLLHTLKVGFYFALWYALNIVYNILNKKLLNVLPSPVTVGSIQFGVGCFYVLLVWALKLRPAP-TLTSQGKAAVQKVGFWHCTGQLASMVSLGAGPVSFTHIVKALEPFFSAVVSALAFGTWMKPQVYATLLPVVGGVGYACLKERSFSWLAFYMAMGSNLAFALRAVLSKVAMSSGANVG-TNISSTNVFAMVTLAAFVWSIPMALVTEGRSFGTLWNKALSQ-QSAADLCKALFVSGMFHYLNNEV 346          
BLAST of mRNA_H-elongata_contig71856.14865.1 vs. uniprot
Match: A0A8J6C741_DIALT (TPT domain-containing protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6C741_DIALT)

HSP 1 Score: 207 bits (526), Expect = 2.940e-60
Identity = 111/252 (44.05%), Postives = 163/252 (64.68%), Query Frame = 1
Query:  298 DADRGMMETARVLGYFALWYALNVWYNIVNKRVLNAIHLPVSIAVLQLGIGSLWVAAQWTLGVRTRPGKLTRSGLSRLTPVAFFHGGGQLATVLSLGAGAVSFTHVVKAMEPFFSALVAAVWFRQVFRWQVYASLVPVVAGVALACAKEINFSWLSFLAAMISNLLFACRSNFSKALMIRPPTQGVSSVSSANLYGLVTLTAFVMFAPVAAIAGWGKWRTTWELALRQGHQGKALALSVLLSGISHYLNNEV 1053
            +   G++ T +V   F +WYA N+ YNI NK++LNA+  P ++AV+QLG+G L++   W   +R  P KL+   +  L P+A  HG G L TV+SLGAGAVSFTH+VKA EPFFS +++A++ +  F   VY +L+PVV GV +A   E++FSW++FL AM SN  F+ R+ FSK  M +P  QG  ++ +ANLYG++T+ +F+M  P A +    K +  W  A+  GH    L  + L+SG+ +YL NEV
Sbjct:   61 EGSSGLLNTLKVGFLFGVWYAFNIVYNISNKKILNALPFPWTMAVVQLGVGLLYLLPLWMSPLRKAP-KLSSENIKALMPIALMHGIGHLCTVISLGAGAVSFTHIVKAAEPFFSTVMSAIFTKSYFPVPVYLALLPVVGGVGIASLTELSFSWVAFLNAMGSNTAFSLRAIFSKKAMEKP--QG-ENMGAANLYGVLTIMSFLMLLPFALVLEGAKLKGGWAAAIAAGHTANYLLKTSLVSGLFYYLYNEV 308          
BLAST of mRNA_H-elongata_contig71856.14865.1 vs. uniprot
Match: A0A7S1XYR7_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XYR7_9STRA)

HSP 1 Score: 207 bits (526), Expect = 3.270e-60
Identity = 115/250 (46.00%), Postives = 162/250 (64.80%), Query Frame = 1
Query:  310 GMMETARVLGYFALWYALNVWYNIVNKRVLNAIHLPVSIAVLQLGIGSLWVAAQWTL--GVRTRPGKLTRSGLSRLTPVAFFHGGGQLATVLSLGAGAVSFTHVVKAMEPFFSALVAAVWFRQVFRWQVYASLVPVVAGVALACAKEINFSWLSFLAAMISNLLFACRSNFSKALMIRPPTQGVSSVSSANLYGLVTLTAFVMFAPVAAIAGWGKWRTTWELALRQGHQGKALALSVLLSGISHYLNNEV 1053
            GM+ T ++  YF LWYA NV YN+ NK+VLNA+ LP +I+  QLGIG L+V   W L  G R  P  LT   +  L P+A  H  G L TV+SL AG+VSFTH+VKA EPFFS +++AV+ +  F+  VY +L+P+V GVA+A  KE++F+W+SFL AM SN  F+ R+ FSK  M  P  +   ++S+ NLY ++T+ +F+  AP+A +    K    W+ AL  G +   L   +L+SG+S+YL NEV
Sbjct:   67 GMLHTLKIGVYFFLWYAFNVVYNLTNKQVLNALPLPWTISAAQLGIGLLYVFPVWLLKLGGRKAP-VLTMENVKTLMPIATCHTTGHLCTVISLSAGSVSFTHIVKAAEPFFSTVMSAVFLKSFFKLPVYLTLIPIVVGVAMASLKELSFTWVSFLNAMASNTAFSMRAIFSKKQMNAPMGE---NMSAPNLYAVLTIMSFLGLAPLAGVIEGRKIGPAWDSALSAGLESSELTKKILMSGLSYYLYNEV 312          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig71856.14865.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JZK6_9PHAE1.870e-13965.03TPT domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A4D9D5R1_9STRA6.720e-8456.97TPT domain-containing protein n=2 Tax=Monodopsidac... [more]
A0A836CFX7_9STRA6.170e-7957.60Plastidic triose-phosphate/phosphate translocator ... [more]
A0A7S4DBS7_HETAK3.490e-7855.06Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S4NB18_9STRA6.270e-6446.36Hypothetical protein n=2 Tax=Odontella aurita TaxI... [more]
A0A7S1FZ62_9STRA1.310e-6345.85Hypothetical protein n=2 Tax=Corethron hystrix Tax... [more]
A0A1E7F950_9STRA2.570e-6346.34TPT-domain-containing protein n=1 Tax=Fragilariops... [more]
B7G197_PHATC1.120e-6047.01Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A8J6C741_DIALT2.940e-6044.05TPT domain-containing protein n=2 Tax=Diacronema l... [more]
A0A7S1XYR7_9STRA3.270e-6046.00Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig71856contigH-elongata_contig71856:625..3055 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score422.9
Seed ortholog evalue1.4e-115
Seed eggNOG ortholog2880.D8LKC0
Preferred nameSLC35E3
KEGG koko:K06643,ko:K15283,ko:K15285
KEGG TC2.A.7.9
KEGG Pathwayko01522,ko01524,ko04068,ko04110,ko04115,ko04120,ko04144,ko04151,ko04218,ko04919,ko05165,ko05169,ko05200,ko05202,ko05203,ko05205,ko05206,ko05214,ko05215,ko05218,ko05219,ko05220,map01522,map01524,map04068,map04110,map04115,map04120,map04144,map04151,map04218,map04919,map05165,map05169,map05200,map05202,map05203,map05205,map05206,map05214,map05215,map05218,map05219,map05220
EggNOG free text desc.carbohydrate transport
EggNOG OGsKOG1441@1,KOG1441@2759
EC2.3.2.27
COG Functional cat.Z
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko02000,ko04121,ko04131
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionputative phosphate/phosphoenolpyruvate translocator precursor protein
Ec32 orthologEc-01_009700.1
Exons3
Model size1053
Cds size1053
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig71856.14865.1prot_H-elongata_contig71856.14865.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig71856 625..3055 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931120.119134-CDS-H-elongata_contig71856:624..8771622931120.119134-CDS-H-elongata_contig71856:624..877Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig71856 625..877 +
1691679706.4843085-CDS-H-elongata_contig71856:624..8771691679706.4843085-CDS-H-elongata_contig71856:624..877Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig71856 625..877 +
1622931120.136957-CDS-H-elongata_contig71856:946..14351622931120.136957-CDS-H-elongata_contig71856:946..1435Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig71856 947..1435 +
1691679706.4988708-CDS-H-elongata_contig71856:946..14351691679706.4988708-CDS-H-elongata_contig71856:946..1435Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig71856 947..1435 +
1622931120.1529865-CDS-H-elongata_contig71856:2744..30551622931120.1529865-CDS-H-elongata_contig71856:2744..3055Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig71856 2745..3055 +
1691679706.5083644-CDS-H-elongata_contig71856:2744..30551691679706.5083644-CDS-H-elongata_contig71856:2744..3055Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig71856 2745..3055 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig71856.14865.1

>prot_H-elongata_contig71856.14865.1 ID=prot_H-elongata_contig71856.14865.1|Name=mRNA_H-elongata_contig71856.14865.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=351bp
MRRFFLLLLVYLLAPPCFSSDFMTVKRRGKHAKRHERFLMVPSTSRSHTR
ISDEDGSCLSRGAGSLASASPAAAVFSHLLRGGGTTATSTTNSVSQRKID
ADRGMMETARVLGYFALWYALNVWYNIVNKRVLNAIHLPVSIAVLQLGIG
SLWVAAQWTLGVRTRPGKLTRSGLSRLTPVAFFHGGGQLATVLSLGAGAV
SFTHVVKAMEPFFSALVAAVWFRQVFRWQVYASLVPVVAGVALACAKEIN
FSWLSFLAAMISNLLFACRSNFSKALMIRPPTQGVSSVSSANLYGLVTLT
AFVMFAPVAAIAGWGKWRTTWELALRQGHQGKALALSVLLSGISHYLNNE
V
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mRNA from alignment at H-elongata_contig71856:625..3055+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig71856.14865.1 ID=mRNA_H-elongata_contig71856.14865.1|Name=mRNA_H-elongata_contig71856.14865.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2431bp|location=Sequence derived from alignment at H-elongata_contig71856:625..3055+ (Himanthalia elongata Himel1 dioecious)
ATGCGTCGATTTTTTCTACTTTTATTGGTATACCTGTTGGCACCACCATG CTTTTCGAGCGATTTTATGACAGTAAAGAGACGTGGGAAGCACGCCAAGC GTCATGAAAGATTCTTGATGGTTCCAAGCACCTCACGATCTCACACACGT ATTAGCGATGAGGACGGCAGCTGCTTGAGTCGGGGAGCAGGCAGCCTTGC TTCCGCATCCCCCGCAGCCGCTGTGTTTTCTCATCTTCTTCGGGGTGGAG GAAGTGATCAAGCTTCACCATCGTGCCCAGCCGTTCTACCATCAGCATCG TCGCCGCCGACCCCAACACTAGCGACAGCAACATCAACAACCAACTCTGT ATCTCAAAGAAAAATCGATGCAGACCGAGGCATGATGGAAACGGCGCGCG TCTTAGGATACTTCGCGTTGTGGTACGCTCTCAACGTGTGGTACAATATA GTGAACAAGAGGGTTTTAAACGCGATCCACCTTCCGGTTTCAATCGCTGT CTTGCAGCTGGGAATCGGTAGCCTGTGGGTGGCAGCGCAGTGGACGTTGG GCGTACGGACTCGACCTGGGAAACTCACGAGATCAGGCTTGAGCCGACTC ACACCTGTCGCATTTTTCCACGGCGGCGGGCAGCTCGCGACTGTGCTGAG CCTAGGAGCGGGTGCGGTGAGCTTCACGCACGTCGTGAAGGCGATGGAGC CTTTCTTCTCGGCTCTGGTTGCGGCAGTTTGGTTTCGGCAGGTATTCCGG TGGCAGGTCTACGCGTCTCTCGTGCCTGTGGTGGCCGGCGTGGCGCTTGC TTGCGCGAAAGGTGTGAGCGGGGAGGTACATACCTTAGTGTCGAGGAACA ACCACGAACTGCTAAGAGAACGCTCTCCTCTGAGGGAGCAAATACCCCCC CCCACCTCGCAATTGCGAAGTTCAACTCTATTATTATAACAAGGTGTTGA TTGCTGTTAGTAGGACTTGAATGCCTTCACAGTTTTCGAGAAGAAAAACA ATTGGTACAGCGCCTGACAGCGCGTTAAAAATATTTCGCGATTTCGCCCA AGAACTACTATACGGTACAAAACACCATTTTCTTTTTGTTTGCTTACTTT CTGTCGAGAGCCTACCAACAACACACGACACTGCAATGTTGCCCATCCCG TCATAGCCTATGGTCTTAAGAGATCAACCAATCTCTGCCCGGTTCACGTT TTTGTTTTGCTATCGCGACGAAGTTCAGCACTCTTACAGCTCGTCAAAAA ATGGACGAACTTTGCTTCCAAAAAACCTCAAAAAAAGCTAAGAATCGAGC TAATGTTTTCGGCTCTACTTATGGCTCACTACGTTGTTATGATTAGACTA CAACAAAGAGTGCGGGGAGGGGAGATCGCCTATTTACCGCACATATGCGG TAAATTGGTTCTAACACACAATCATCCAAGCGACGAAAACCCCGGGGATG CCATTTATCCGTTCCCTCCCATGGGTGGGTGGGTGTGGGTTAAGGGGAAG GGGAGGGTTGGGTCAGCCAGTATATATATGTTTCAGAGAAACGGCTATTT TACTCTGCATGAAATTAACAATATTTACTATTTTTTCCCGTAACCAGAAA GGGAACGGATAAGTGGTATCCCCGGGGTTTCCATCGCTTGGATGATTGTG TGTTAGAACCAATTTACCGCATATGTGCGGTAAATAGGCGATCCCCGGGG AGGGGAGTTTTCCTCCCATGTGGGGTGAGGCGTTCTTCCTGTTTTCTCTT GTACAGTTAGTACAATATTAAGCGTCGGAATTCGCCGATTCGTGGACGAC GAAACTGTCTATTAATAGTAGTTCGCATGCTCTGTCTAGCTCGCCTCGAC CATTTGAGTCCACATCAAGACCTGCGAATTTAGCGCCTTCGTGTCGCAAG CCGTTGTACGGCAAGGCCAGGGTAAGCAACGAAATAATTCGGTCTGTTCA GGATGGGACACGTCTATGAAGTGGTTTCGTCCGTCCATCGGGCTTCCGAA GACAGCTCAGCTCAGACAGCTTATCATTCGGAGTTGGAAGCCTCTAGTCA CTCGGAGAGCGGCGCTGGTTCCGAACCTAAACCTGAACATTACCCTGCCC TGTGCTGCCACATCCTCCAGAGATAAACTTCAGCTGGCTGAGTTTTTTGG CGGCCATGATATCCAACCTGCTCTTCGCCTGCCGGTCCAACTTCTCCAAG GCGCTCATGATCCGCCCCCCTACCCAAGGCGTTTCTTCCGTATCTTCCGC GAATCTTTACGGACTCGTGACATTGACGGCGTTCGTCATGTTTGCGCCGG TGGCGGCAATCGCCGGCTGGGGGAAATGGAGAACGACTTGGGAGCTGGCG CTGAGACAAGGCCACCAGGGGAAGGCGCTCGCGCTCAGCGTCCTCCTGTC GGGGATTTCGCACTACCTCAACAACGAGGTG
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Coding sequence (CDS) from alignment at H-elongata_contig71856:625..3055+

>mRNA_H-elongata_contig71856.14865.1 ID=mRNA_H-elongata_contig71856.14865.1|Name=mRNA_H-elongata_contig71856.14865.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2106bp|location=Sequence derived from alignment at H-elongata_contig71856:625..3055+ (Himanthalia elongata Himel1 dioecious)
ATGCGTCGATTTTTTCTACTTTTATTGGTATACCTGTTGGCACCACCATG
CTTTTCGAGCGATTTTATGACAGTAAAGAGACGTGGGAAGCACGCCAAGC
GTCATGAAAGATTCTTGATGGTTCCAAGCACCTCACGATCTCACACACGT
ATTAGCGATGAGGACGGCAGCTGCTTGAGTCGGGGAGCAGGCAGCCTTGC
TTCCGCATCCCCCGCAGCCGCTGTGTTTTCTCATCTTCTTCGGGGTGGAG
GAAATGCGTCGATTTTTTCTACTTTTATTGGTATACCTGTTGGCACCACC
ATGCTTTTCGAGCGATTTTATGACAGTAAAGAGACGTGGGAAGCACGCCA
AGCGTCATGAAAGATTCTTGATGGTTCCAAGCACCTCACGATCTCACACA
CGTATTAGCGATGAGGACGGCAGCTGCTTGAGTCGGGGAGCAGGCAGCCT
TGCTTCCGCATCCCCCGCAGCCGCTGTGTTTTCTCATCTTCTTCGGGGTG
GAGGAACGACAGCAACATCAACAACCAACTCTGTATCTCAAAGAAAAATC
GATGCAGACCGAGGCATGATGGAAACGGCGCGCGTCTTAGGATACTTCGC
GTTGTGGTACGCTCTCAACGTGTGGTACAATATAGTGAACAAGAGGGTTT
TAAACGCGATCCACCTTCCGGTTTCAATCGCTGTCTTGCAGCTGGGAATC
GGTAGCCTGTGGGTGGCAGCGCAGTGGACGTTGGGCGTACGGACTCGACC
TGGGAAACTCACGAGATCAGGCTTGAGCCGACTCACACCTGTCGCATTTT
TCCACGGCGGCGGGCAGCTCGCGACTGTGCTGAGCCTAGGAGCGGGTGCG
GTGAGCTTCACGCACGTCGTGAAGGCGATGGAGCCTTTCTTCTCGGCTCT
GGTTGCGGCAGTTTGGTTTCGGCAGGTATTCCGGTGGCAGGTCTACGCGT
CTCTCGTGCCTGTGGTGGCCGGCGTGGCGCTTGCTTGCGCGAAAGCGACA
GCAACATCAACAACCAACTCTGTATCTCAAAGAAAAATCGATGCAGACCG
AGGCATGATGGAAACGGCGCGCGTCTTAGGATACTTCGCGTTGTGGTACG
CTCTCAACGTGTGGTACAATATAGTGAACAAGAGGGTTTTAAACGCGATC
CACCTTCCGGTTTCAATCGCTGTCTTGCAGCTGGGAATCGGTAGCCTGTG
GGTGGCAGCGCAGTGGACGTTGGGCGTACGGACTCGACCTGGGAAACTCA
CGAGATCAGGCTTGAGCCGACTCACACCTGTCGCATTTTTCCACGGCGGC
GGGCAGCTCGCGACTGTGCTGAGCCTAGGAGCGGGTGCGGTGAGCTTCAC
GCACGTCGTGAAGGCGATGGAGCCTTTCTTCTCGGCTCTGGTTGCGGCAG
TTTGGTTTCGGCAGGTATTCCGGTGGCAGGTCTACGCGTCTCTCGTGCCT
GTGGTGGCCGGCGTGGCGCTTGCTTGCGCGAAAGAGATAAACTTCAGCTG
GCTGAGTTTTTTGGCGGCCATGATATCCAACCTGCTCTTCGCCTGCCGGT
CCAACTTCTCCAAGGCGCTCATGATCCGCCCCCCTACCCAAGGCGTTTCT
TCCGTATCTTCCGCGAATCTTTACGGACTCGTGACATTGACGGCGTTCGT
CATGTTTGCGCCGGTGGCGGCAATCGCCGGCTGGGGGAAATGGAGAACGA
CTTGGGAGCTGGCGCTGAGACAAGGCCACCAGGGGAAGGCGCTCGCGCTC
AGCGTCCTCCTGTCGGGGATTTCGCACTACCTCAACAACGAGGTGAGATA
AACTTCAGCTGGCTGAGTTTTTTGGCGGCCATGATATCCAACCTGCTCTT
CGCCTGCCGGTCCAACTTCTCCAAGGCGCTCATGATCCGCCCCCCTACCC
AAGGCGTTTCTTCCGTATCTTCCGCGAATCTTTACGGACTCGTGACATTG
ACGGCGTTCGTCATGTTTGCGCCGGTGGCGGCAATCGCCGGCTGGGGGAA
ATGGAGAACGACTTGGGAGCTGGCGCTGAGACAAGGCCACCAGGGGAAGG
CGCTCGCGCTCAGCGTCCTCCTGTCGGGGATTTCGCACTACCTCAACAAC
GAGGTG
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