mRNA_H-elongata_contig7170.14844.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig7170.14844.1 vs. uniprot
Match: D8LJM5_ECTSI (Kinesin family member 3A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJM5_ECTSI) HSP 1 Score: 456 bits (1173), Expect = 1.600e-141 Identity = 303/422 (71.80%), Postives = 321/422 (76.07%), Query Frame = 1
Query: 1 MAAGTDEGSSPSNSEPVQVIVRVRPEPGASTAPVVVARDERSVALLPXXXXXXXXTGKAKPAVDTKTFTFDKVYGPQATQTEVYGFARPLVLSAVDGYNSTIFAYGHTGSGKTHTMMGTPTQPGMTPLAVQDMFALI----PREPDTIFIVRMSYVELYNNRFRNLLEAGAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESVGEGEVGALSLRSSWRSMTTHLGSS---CGGS-----GGGLSSRSCEGGLAALASSQRRAAAAANIAAGRNGKIEVRECPEMGVFLSGPGLRRAVTSAEEVLRLVARGDATRATGATDCNEHSSRSHAILSLHRLSLSGSEGKRLHETQNINLSLSSLGDVLACLSRNATIAARRSARAEGGVAANAXXXXXXNSTGARETVAPVPYRNSKLTHFLK 1230
MA +EG PSNSEPVQVIVRVRPEPGAS APVVVARDERSVALLPXXXXXXXXTGKAKPAVDTKTFTFDKV+ PQA+Q EVY ARPLVLSAVDGYNSTIFAYGHTGSGKTHTMMGTP+QPGMTP AVQDMFALI RE DT+FIVRMSYVELYNNRFRNLLE G G XXXXXXXXXX + EV +LS SSWRS + GSS CGG+ G GLSS QRRAAAAA +AAGRN KIEVRE PE GVFLSGPGLRRAVTS EE LRLVARGD RA GATDCN+HSSRSHAILS RLSLSGSEGKRL+ETQNINL LSSLGDVLACLS+NATI +RR++R + G +A XXXXX E APVPYRNSKLTHFLK
Sbjct: 1 MAVLREEGL-PSNSEPVQVIVRVRPEPGASAAPVVVARDERSVALLPXXXXXXXXTGKAKPAVDTKTFTFDKVFPPQASQAEVYEVARPLVLSAVDGYNSTIFAYGHTGSGKTHTMMGTPSQPGMTPRAVQDMFALIRQMAAREQDTMFIVRMSYVELYNNRFRNLLEGGGGGDXXXXXXXXXXVGFGSSIGSGRGSW-----REAADAEVSSLS--SSWRSTASPPGSSRSLCGGAAAAAAGRGLSSXXXXXXXXXXXXXQRRAAAAATVAAGRNAKIEVRESPEAGVFLSGPGLRRAVTSGEEALRLVARGDEVRAVGATDCNQHSSRSHAILS-ERLSLSGSEGKRLYETQNINLCLSSLGDVLACLSKNATIMSRRNSRNDSG--GHAGXXXXXXXXXXXENAAPVPYRNSKLTHFLK 411
BLAST of mRNA_H-elongata_contig7170.14844.1 vs. uniprot
Match: A0A7S4E6T1_9STRA (Hypothetical protein n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E6T1_9STRA) HSP 1 Score: 200 bits (509), Expect = 7.310e-53 Identity = 159/437 (36.38%), Postives = 201/437 (46.00%), Query Frame = 1
Query: 43 EPVQVIVRVRPEPGA--STAPVVVARDERSVALLPXXXXXXXXTGKAKPAVDTKTFTFDKVYGPQATQTEVYGFARPLVLSAVDGYNSTIFAYGHTGSGKTHTMMGTPTQPGMTPLAVQDMFALIP---REPDTIFIVRMSYVELYNNRFRNLLEAGAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESVGEGEVGALSLRSSWRSMTTHLGSSCGGSGGGLSSRSCEGGLAALASSQRRAAAAANIAAGRNGKIEVRECPEMGVFLSGPG-LRRAVTSAEEVLRLVARGDATRATGATDCNEHSSRSHAILSLH-----------------------------------RLSLSGSEGKRLHETQNINLSLSSLGDVLACLSRNATIAARRSARAEGGVAANAXXXXXXNSTGARETVAPVPYRNSKLTHFLK 1230
E V+VI R+RPEP + + V D P + + +P T+ FT D+V GPQ+ Q +VY +PLV SA GYN+T+FAYGHTGSGKTHTM G QPG+TP AV+++FA I R D +F+V +SYVELYNN+FRNLL+ +G+ C A + KIE+RE + GVFL+GP L+ AVTS +EV L++ GD RA T CN+HSSRSH IL+LH R+SLSG++G+ L E QNINLSL+ LGDVLA LSRN S R E G S G+RE PVPYRNSKLT+ LK
Sbjct: 27 EHVRVIARIRPEPSSVRGCGCLRVTSDTCVELCQPDGVRAQSHSKRGRPR--TRLFTLDRVLGPQSVQADVYEHVKPLVHSAAHGYNATVFAYGHTGSGKTHTMTGDNVQPGVTPRAVRELFAAIEHATRTKDAVFLVHVSYVELYNNQFRNLLD---------------------------------------------------------DVGNHC--------------------------------HASSSTKIEIRESRDTGVFLTGPSNLKVAVTSEQEVQELISLGDKARAYALTRCNDHSSRSHCILTLHVQSQRASIALQDPQNAALTSVHVGKLNLVDLAGSERVSLSGAQGETLVEAQNINLSLALLGDVLAALSRN-------SLRGEQGT-------QFPRSGGSRE---PVPYRNSKLTYLLK 355
BLAST of mRNA_H-elongata_contig7170.14844.1 vs. uniprot
Match: F0YE27_AURAN (Kinesin-like protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YE27_AURAN) HSP 1 Score: 187 bits (476), Expect = 9.360e-53 Identity = 140/376 (37.23%), Postives = 169/376 (44.95%), Query Frame = 1
Query: 196 KTFTFDKVYGPQATQTEVYGFARPLVLSAVDGYNSTIFAYGHTGSGKTHTMMGTPTQPGMTPLAVQDMFALIPR---EPDTIFIVRMSYVELYNNRFRNLLEAGAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESVGEGEVGALSLRSSWRSMTTHLGSSCGGSGGGLSSRSCEGGLAALASSQRRAAAAANIAAGRNGKIEVRECPEMGVFLSGP-GLRRAVTSAEEVLRLVARGDATRATGATDCNEHSSRSHAILSLH---------------------------RLSLSGSEGKRLHETQNINLSLSSLGDVLACLSRNATIAARRSARAEGGVAANAXXXXXXNSTGARETVAPVPYRNSKLTHFLK 1230
K+FT D V GP++ Q +VY RPL LS VDGYN+T+FAYGHTGSGKTHTM GT +PG+TP AV+D+F I R +F+V +SYVELYNN FRNLLE H S GKIE+RE + G+FL GP L+ V S +V LVA GD R +T+CNEHSSRSH +L+LH R+++SG+EG+ L E QNINLSL+ LGDVLA LSRNAT +S R PVPYRNSKLTH LK
Sbjct: 4 KSFTVDGVLGPRSRQDDVYEHVRPLALSVVDGYNATVFAYGHTGSGKTHTMTGTAREPGVTPRAVRDVFGAIERAARRESAVFLVHVSYVELYNNVFRNLLE-----------------------------------------------------DRHDHAPS--------------------------------------QGKIEIRESRDSGIFLGGPPNLKVPVKSERDVRDLVAFGDRQRQYASTNCNEHSSRSHCVLTLHVESRWTESNRHSCRLGKLNLVDLAGSERVAVSGAEGETLVEAQNINLSLALLGDVLAALSRNATRPKSQSPRPP----------------------EPVPYRNSKLTHLLK 266
BLAST of mRNA_H-elongata_contig7170.14844.1 vs. uniprot
Match: A0A2R5G630_9STRA (Kinesin-like protein KIF3A n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G630_9STRA) HSP 1 Score: 169 bits (429), Expect = 2.720e-42 Identity = 133/379 (35.09%), Postives = 168/379 (44.33%), Query Frame = 1
Query: 196 KTFTFDKVYGPQATQTEVYGFARPLVLSAVDGYNSTIFAYGHTGSGKTHTMMGTPTQPGMTPLAVQDMFALI----PREPDTIFIVRMSYVELYNNRFRNLLEAGAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESVGEGEVGALSLRSSWRSMTTHLGSSCGGSGGGLSSRSCEGGLAALASSQRRAAAAANIAAGRNGKIEVRECPEMGVFLSG-PGLRRAVTSAEEVLRLVARGDATRATGATDCNEHSSRSHAILSLH-----------------------------RLSLSGSEGKRLHETQNINLSLSSLGDVLACLSRNATIAARRSARAEGGVAANAXXXXXXNSTGARETVAPVPYRNSKLTHFLK 1230
+TF FD+++GP+ Q +VY PLV S + GYN+TIFAYG TGSGKTHT+ G P G+ P AV +FAL RE D I +V+M YVELYNN+F++LL + A ++ T+H +IE+ VFLSG P L VTSA+E LRL+ G RA GATDCNEHSSRSHAIL+ + RL+LS +EG+ L ETQNINLSLS+LGDVL+ LSR + ++ +R A A VPYRNSKLT LK
Sbjct: 81 RTFHFDRIFGPETAQEDVYAAVDPLVASTIKGYNATIFAYGSTGSGKTHTISGAPGCEGIIPRAVHRIFALAGELADREADGIVLVQMGYVELYNNQFKDLLYSHAQ-----------------------------HGDASSSASTAXXXXXXXXXXSTSH-------------------------------------------RIELHTTKSGSVFLSGTPSLHTPVTSAQEALRLIQLGSRNRAVGATDCNEHSSRSHAILTFYVESRIPSANGATSVAKLGKLHLVDLAGSERLTLSKAEGQTLTETQNINLSLSTLGDVLSALSRLHSSGSKAGSRRAATAADRAC----------------VPYRNSKLTFLLK 371
BLAST of mRNA_H-elongata_contig7170.14844.1 vs. uniprot
Match: A0A482SMD0_9ARCH (Kinesin motor domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SMD0_9ARCH) HSP 1 Score: 141 bits (355), Expect = 3.930e-35 Identity = 120/341 (35.19%), Postives = 149/341 (43.70%), Query Frame = 1
Query: 40 SEPVQVIVRVRPE----------------------------PGASTAPVVV-----ARDERSVALLPXXXXXXXXTGKAKPAVDTKTFTFDKVYGPQATQTEVYGFARPLVLSAVDGYNSTIFAYGHTGSGKTHTMMGTPTQPGMTPLAVQDMFALIPR---EPDTIFIVRMSYVELYNNRFRNLLEAGAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESVGEGEVGALSLRSSWRSMTTHLGSSCGGSGGGLSSRSCEGGLAALASSQRRAAAAANIAAGRNGKIEVRECPEMGVFLSGPGLRRAVTSAEEVLRLVARGDATRATGATDCNEHSSR 954
SEPVQV +R+RPE AS +P V A D+ ++ L+P + K+ AVD K + FDKV+ ATQ E+Y VL+ V GYN+TIFAYG TGSGK++TM G PG+ P A+ D+F I + E D F VR+SYVELYNN FRNLLE A E+ G A SS M GS+ G KIEVRE GVFLSG LR VTSA E +L+A+G+ RAT +T+CNE SSR
Sbjct: 5 SEPVQVFLRIRPEFDETQTNNAKLTPEKMVKTTSYGNLVKVTTASMSPTTVSTCVTASDDHTIRLMPPDGIYA--SRKSVSAVDDKIYHFDKVFSESATQEEIYESVAEQVLATVRGYNTTIFAYGVTGSGKSYTMTGNKAAPGVIPRAIGDIFKSIDKAASESDVYFFVRLSYVELYNNTFRNLLEHVAKDHQNLGKTSNSNTSMSGLFPDLDDLDASAAYEAQF-GPSFAYGRASSNIPMRDFPGSALKGE-----------------------------------KIEVRESQSAGVFLSGTNLRFPVTSAVEAFQLIAKGNKYRATASTNCNEESSR 307
BLAST of mRNA_H-elongata_contig7170.14844.1 vs. uniprot
Match: A0A835Z8L1_9STRA (Kinesin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8L1_9STRA) HSP 1 Score: 141 bits (355), Expect = 8.630e-35 Identity = 135/437 (30.89%), Postives = 179/437 (40.96%), Query Frame = 1
Query: 43 EPVQVIVRVRPEPGASTAPVVVARDE-----------RSVALLPXXXXXXXXTGKAKPAVD-TKTFTFDKVYGPQATQTEVYGFARPLVLSAVDGYNSTIFAYGHTGSGKTHTMMGTPTQPGMTPLAVQDMFALIPREP-----DTIFIVRMSYVELYNNRFRNLLEAGAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESVGEGEVGALSLRSSWRSMTTHLGSSCGGSGGGLSSRSCEGGLAALASSQRRAAAAANIAAGRNGKIEVRECPEMGVFLSG-PGLRRAVTSAEEVLRLVARGDATRATGATDCNEHSSRSHAILSLH----------------------RLSLSGSEGKRLHETQNINLSLSSLGDVLACLSRNATIAARRSARAEGGVAANAXXXXXXNSTGARETVAP-VPYRNSKLTHFLK 1230
E + V VR+RPE + + ++ + D+ V + T ++ A T F FD+V+ + Q EV+ RPLV +A DGY +T+FAYG TGSGKTHT+ GT GM P AV + + + TIF+V +S+VE+YNN F +LL A +A TT N KIE+RE P GV+L+G LR VT EE ++L+ RG RAT T+ NE SSRSHAIL+ R+ LSG+EG L E Q+INLSLS LGDVL+ LS+ ++ A A T P +PYRNSKLTH LK
Sbjct: 2 EAICVAVRIRPEAALAGSSIITSSDDLVSCVRVADAANKVTIACPARACLGSTSQSVVAESATHEFIFDRVFDAASRQEEVFTLVRPLVNAAADGYVATVFAYGMTGSGKTHTISGTGGDVGMLPRAVSLLLDSLKADAAKGPQQTIFMVTISFVEIYNNTFVSLLSAPSA---------------------------------------------------TTD----------------------------------------GNQKIEIRESPTRGVYLTGGTNLRLPVTCTEEAMQLIHRGMEKRATSCTNMNERSSRSHAILTFEVERSTASVRVGKLQLIDLAGSERVGLSGAEGSVLAEAQSINLSLSLLGDVLSALSKYHRAVSKGLASA---------------------TERPFIPYRNSKLTHLLK 326
BLAST of mRNA_H-elongata_contig7170.14844.1 vs. uniprot
Match: A0A5A8CVH4_CAFRO (Kinesin motor domain-containing protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CVH4_CAFRO) HSP 1 Score: 131 bits (329), Expect = 3.350e-29 Identity = 138/419 (32.94%), Postives = 173/419 (41.29%), Query Frame = 1
Query: 187 VDTKTFTFDKVYGPQATQTEVYGFARPLVLSAVDGYNSTIFAYGHTGSGKTHTMMGT-----------PTQPGMTPLA--VQDMFALIP-REPDTIFIVRMSYVELYNNRFRNLLEAGAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESVGEGEVGALSLRSSWRSMTTHLGSSCGGSGGGLSSRSCEGGLAALASSQRRAAAAANIAAGRNGKIEVRECPEMGVFLSG-PGLRRAVTSAEEVLRLVARGDATRATGATDCNEHSSRSHAILSL----------------------------------------------------HRLSLSGS--EGKRLHETQNINLSLSSLGDVLACLSRNATIAARRSARAEGGVAANAXXXXXXNSTGARETVAPV--PYRNSKLTHFLK 1230
++ + F FD+V+ P ATQT+V+ RPLV V GYN+T+ AYG TGSGKTH++MG PG LA V +F+ I R + F VR+SYVELYNN FR+LL AA E A SL ++ +S S A AS Q + A + +G KI +RE GVFL G P LR V+S + LRLVA G RA GATD N HSSRSHAI+ + RLS+SG+ + RL ETQ+INLSL+ L DVL+ L A A+G APV PYRNSKLT L+
Sbjct: 1378 LEARPFVFDRVFAPDATQTDVFAQVRPLVEGVVSGYNATVMAYGSTGSGKTHSIMGQGGIDAALESSGAVGPGSGVLARTVSALFSRIADRAAEREFTVRLSYVELYNNNFRDLLHKSAAAGDAV------------------------------RAETTARSLADAFNGADAEEATSSSAS--------------AAASGQPQNMADRDSPSGP--KISIRESRSRGVFLEGSPTLRVPVSSVVDCLRLVAEGTRNRAVGATDLNAHSSRSHAIVIIDVESIAKDSADEDAVAAAAATPGAVTASGRPRRRRRAPVRLGRLCVVDLAGSERLSMSGAWRDEARLAETQSINLSLTVLADVLSTL-----------AEAKG--------------------TAPVMVPYRNSKLTFLLR 1719
BLAST of mRNA_H-elongata_contig7170.14844.1 vs. uniprot
Match: A0A5A8D404_CAFRO (Kinesin motor domain-containing protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8D404_CAFRO) HSP 1 Score: 130 bits (328), Expect = 3.710e-29 Identity = 138/419 (32.94%), Postives = 173/419 (41.29%), Query Frame = 1
Query: 187 VDTKTFTFDKVYGPQATQTEVYGFARPLVLSAVDGYNSTIFAYGHTGSGKTHTMMGT-----------PTQPGMTPLA--VQDMFALIP-REPDTIFIVRMSYVELYNNRFRNLLEAGAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESVGEGEVGALSLRSSWRSMTTHLGSSCGGSGGGLSSRSCEGGLAALASSQRRAAAAANIAAGRNGKIEVRECPEMGVFLSG-PGLRRAVTSAEEVLRLVARGDATRATGATDCNEHSSRSHAILSL----------------------------------------------------HRLSLSGS--EGKRLHETQNINLSLSSLGDVLACLSRNATIAARRSARAEGGVAANAXXXXXXNSTGARETVAPV--PYRNSKLTHFLK 1230
++ + F FD+V+ P ATQT+V+ RPLV V GYN+T+ AYG TGSGKTH++MG PG LA V +F+ I R + F VR+SYVELYNN FR+LL AA E A SL ++ +S S A AS Q + A + +G KI +RE GVFL G P LR V+S + LRLVA G RA GATD N HSSRSHAI+ + RLS+SG+ + RL ETQ+INLSL+ L DVL+ L A A+G APV PYRNSKLT L+
Sbjct: 115 LEARPFVFDRVFAPDATQTDVFAQVRPLVEGVVSGYNATVMAYGSTGSGKTHSIMGQGGIDAALESSGAVGPGSGVLARTVSALFSRIADRAAEREFTVRLSYVELYNNNFRDLLHKSAAAGDAV------------------------------RAETTARSLADAFNGADADEATSSSAS--------------AAASGQPQNMADRDSPSGP--KISIRESRSRGVFLEGSPTLRVPVSSVVDCLRLVAEGTRNRAVGATDLNAHSSRSHAIVIIDVESIAKDSADEDAXXXXXXXXXXVTASGRPRRRRRAPVRLGRLCVVDLAGSERLSMSGAWRDEARLAETQSINLSLTVLADVLSTL-----------AEAKG--------------------TAPVMVPYRNSKLTFLLR 456
BLAST of mRNA_H-elongata_contig7170.14844.1 vs. uniprot
Match: A0A5A8DZ16_CAFRO (Kinesin motor domain-containing protein n=5 Tax=Sar TaxID=2698737 RepID=A0A5A8DZ16_CAFRO) HSP 1 Score: 130 bits (328), Expect = 4.010e-29 Identity = 138/419 (32.94%), Postives = 173/419 (41.29%), Query Frame = 1
Query: 187 VDTKTFTFDKVYGPQATQTEVYGFARPLVLSAVDGYNSTIFAYGHTGSGKTHTMMGT-----------PTQPGMTPLA--VQDMFALIP-REPDTIFIVRMSYVELYNNRFRNLLEAGAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESVGEGEVGALSLRSSWRSMTTHLGSSCGGSGGGLSSRSCEGGLAALASSQRRAAAAANIAAGRNGKIEVRECPEMGVFLSG-PGLRRAVTSAEEVLRLVARGDATRATGATDCNEHSSRSHAILSL----------------------------------------------------HRLSLSGS--EGKRLHETQNINLSLSSLGDVLACLSRNATIAARRSARAEGGVAANAXXXXXXNSTGARETVAPV--PYRNSKLTHFLK 1230
++ + F FD+V+ P ATQT+V+ RPLV V GYN+T+ AYG TGSGKTH++MG PG LA V +F+ I R + F VR+SYVELYNN FR+LL AA E A SL ++ +S S A AS Q + A + +G KI +RE GVFL G P LR V+S + LRLVA G RA GATD N HSSRSHAI+ + RLS+SG+ + RL ETQ+INLSL+ L DVL+ L A A+G APV PYRNSKLT L+
Sbjct: 115 LEARPFVFDRVFAPDATQTDVFAQVRPLVEGVVSGYNATVMAYGSTGSGKTHSIMGQGGIDAALESSGAVGPGSGVLARTVSALFSRIADRAAEREFTVRLSYVELYNNNFRDLLHKSAAAGDAV------------------------------RAETTARSLADAFNGADADEATSSSAS--------------AAASGQPQNMADRDSPSGP--KISIRESRSRGVFLEGSPTLRVPVSSVVDCLRLVAEGTRNRAVGATDLNAHSSRSHAIVIIDVESIAKDSADEDAXXXXXXXXXXVTASGRPRRRRRAPVRLGRLCVVDLAGSERLSMSGAWRDEARLAETQSINLSLTVLADVLSTL-----------AEAKG--------------------TAPVMVPYRNSKLTFLLR 456
BLAST of mRNA_H-elongata_contig7170.14844.1 vs. uniprot
Match: A0A0S7F4B5_9TELE (Kinesin-like protein (Fragment) n=4 Tax=Euteleosteomorpha TaxID=1489388 RepID=A0A0S7F4B5_9TELE) HSP 1 Score: 110 bits (276), Expect = 3.200e-24 Identity = 102/329 (31.00%), Postives = 141/329 (42.86%), Query Frame = 1
Query: 196 KTFTFDKVYGPQATQTEVYGF-ARPLVLSAVDGYNSTIFAYGHTGSGKTHTMMGTPTQP---GMTPLAVQDMFALIPR-EPDTIFIVRMSYVELYNNRFRNLLEAGAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESVGEGEVGALSLRSSWRSMTTHLGSSCGGSGGGLSSRSCEGGLAALASSQRRAAAAANIAAGRNGKIEVRECPEMGVF---LSGPGLRRAVTSAEEVLRLVARGDATRATGATDCNEHSSRSHAILS--------------------LHRLSLSGSE--------GKRLHETQNINLSLSSLGDVLACL 1074
KTFTFD V+GP + Q +VY ARP+V S ++GYN TIFAYG TG+GKT TM G P G+ P + +F I + E DT F+VR+SY+E+YN R+LL G L+ ++EV+E P++GV+ LSG V +A+++ R++ G R+ GAT+ NEHSSRSHAI + LH + L+GSE G+RL E INLSLS+LG+V++ L
Sbjct: 30 KTFTFDTVFGPDSKQLDVYNLTARPIVDSVLEGYNGTIFAYGQTGTGKTFTMEGVRAVPELRGIIPNSFAHIFGHIAKAEGDTRFLVRVSYLEIYNEEVRDLL--------------------------------------------GKDQLQ----------------------------------------------------RLEVKERPDVGVYIKDLSG----YVVNNADDMDRIMTLGHKNRSVGATNMNEHSSRSHAIFTITIECSEKGVDGNQHVRMGKLHLVDLAGSERQGKTGATGQRLKEATKINLSLSTLGNVISAL 258 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig7170.14844.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig7170.14844.1 >prot_H-elongata_contig7170.14844.1 ID=prot_H-elongata_contig7170.14844.1|Name=mRNA_H-elongata_contig7170.14844.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=413bp MAAGTDEGSSPSNSEPVQVIVRVRPEPGASTAPVVVARDERSVALLPLPFback to top mRNA from alignment at H-elongata_contig7170:4718..10421+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig7170.14844.1 ID=mRNA_H-elongata_contig7170.14844.1|Name=mRNA_H-elongata_contig7170.14844.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=5704bp|location=Sequence derived from alignment at H-elongata_contig7170:4718..10421+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig7170:4718..10421+ >mRNA_H-elongata_contig7170.14844.1 ID=mRNA_H-elongata_contig7170.14844.1|Name=mRNA_H-elongata_contig7170.14844.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2478bp|location=Sequence derived from alignment at H-elongata_contig7170:4718..10421+ (Himanthalia elongata Himel1 dioecious)back to top |