mRNA_H-elongata_contig7153.14820.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig7153.14820.1 vs. uniprot
Match: A0A6H5L3N0_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L3N0_9PHAE) HSP 1 Score: 213 bits (543), Expect = 1.800e-62 Identity = 101/139 (72.66%), Postives = 122/139 (87.77%), Query Frame = 1
Query: 1 LLLANANPAAVSRFRVGLVHNEGSTTYERFNVWSSGMWVCTATGSTGSMNAAGGQPMSPESTDIQYMVREHMVEDDLEHVREKGQGIIPQESKIEIRWNSKNGCVFVDGEHSRHELRLGDELDVSADAPPLFLYAKQTP 417
LLLAN NPAAVSRFR+GLV EG++ E FNVWSSGMWVCTATGST +M AAGGQPM+P+S+D+QYMVREHMVE +EH+R KGQGI+PQ SKIEIRWNSK+G V++DGEHS H ++LGDEL +SA+APPL+LYA++ P
Sbjct: 194 LLLANPNPAAVSRFRLGLVPAEGASAREWFNVWSSGMWVCTATGSTAAMKAAGGQPMAPDSSDMQYMVREHMVEAHMEHLRSKGQGIVPQGSKIEIRWNSKDGFVYIDGEHSVHSVQLGDELQMSANAPPLYLYAQEPP 332
BLAST of mRNA_H-elongata_contig7153.14820.1 vs. uniprot
Match: K8YMW2_NANGC (Uncharacterized protein (Fragment) n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=K8YMW2_NANGC) HSP 1 Score: 147 bits (371), Expect = 2.940e-37 Identity = 68/132 (51.52%), Postives = 102/132 (77.27%), Query Frame = 1
Query: 1 LLLANANPAAVSRFRVGLVHNEGSTTYERFNVWSSGMWVCTATGSTGSMNAAGGQPMSPESTDIQYMVREHMVEDDLEHVREKGQGIIPQESKIEIRWNSKNGCVFVDGEHSRHELRLGDELDVSADAPPLF 396
+L+A+ PAAVSRFR+G +++ G T FNVWSSG+W+ TATGS+ +M AAGG M +S+++QYMVREH++E EH+ ++G G++ + +++RWNS++GCV+VDG H RH L+LGD + +SADAPP++
Sbjct: 210 ILVAHPIPAAVSRFRLGFLNSAGDET-SHFNVWSSGLWISTATGSSAAMTAAGGVLMDLKSSELQYMVREHLLEAGGEHLEKEGHGMLQPGNTLQMRWNSQHGCVYVDGSHVRHNLQLGDTVSLSADAPPIW 340
BLAST of mRNA_H-elongata_contig7153.14820.1 vs. uniprot
Match: A0A835YI66_9STRA (ATP-NAD kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YI66_9STRA) HSP 1 Score: 141 bits (355), Expect = 4.000e-35 Identity = 67/139 (48.20%), Postives = 103/139 (74.10%), Query Frame = 1
Query: 1 LLLANANPAAVSRFRVGLVHNEGSTTYERF--NVWSSGMWVCTATGSTGSMNAAGGQPMSPESTDIQYMVREHMVEDDLEHVREKGQGIIPQESKIEIRWNSKNGCVFVDGEHSRHELRLGDELDVSADAPPLFLYAKQ 411
+L+A+ PAAVSRFR+G ++ G E F NVWSSG+W TATGS+ M AAGG+ M P S ++QYMVREH+VE+ ++H+R++ G++ + S++ IRWNS+ G ++VDG H+ H+L+LGDE++++A +P L+L+
Sbjct: 181 ILVAHPIPAAVSRFRLGFLNGSGLEEMEHFSFNVWSSGIWFSTATGSSAVMRAAGGEVMEPLSRELQYMVREHLVEEGMDHLRDESHGMVSEGSRVRIRWNSQFGNIYVDGAHAVHKLQLGDEIELNAGSP-LWLFCSD 318
BLAST of mRNA_H-elongata_contig7153.14820.1 vs. uniprot
Match: A0A7S3YKT0_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YKT0_HETAK) HSP 1 Score: 136 bits (342), Expect = 7.520e-33 Identity = 68/138 (49.28%), Postives = 93/138 (67.39%), Query Frame = 1
Query: 1 LLLANANPAAVSRFRVGLVHNEGSTTYE----RFNVWSSGMWVCTATGSTGSMNAAGGQPMSPESTDIQYMVREHMVEDDLEHVREKGQGIIPQESKIEIRWNSKNGCVFVDGEHSRHELRLGDELDVSADAPPLFLY 402
+LLA+ NP AVSRFR+GL N E R NVWSSG+WV T TGS+ ++ AAGG + P ++QYMVREH++E EH+ E+G G++ K+ +RW+S G V++DG H H LRLGDE+++SA AP L L+
Sbjct: 226 VLLAHPNPGAVSRFRLGLTGNSFGLGEEEERLRLNVWSSGLWVSTPTGSSAAIRAAGGVVVPPHVKELQYMVREHLLERGYEHLAERGHGMVSPLEKMVVRWSSMEGAVYIDGAHMTHRLRLGDEVEMSAAAPDLRLF 363
BLAST of mRNA_H-elongata_contig7153.14820.1 vs. uniprot
Match: A0A7S1D3L6_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D3L6_CYCTE) HSP 1 Score: 134 bits (336), Expect = 2.210e-32 Identity = 71/159 (44.65%), Postives = 95/159 (59.75%), Query Frame = 1
Query: 1 LLLANANPAAVSRFRVGL---VHNEGSTTYERF-----------------NVWSSGMWVCTATGSTGSMNAAGGQPMSPESTDIQYMVREHMVE--DDLEHVREKGQGIIPQESKIEIRWNSKNGCVFVDGEHSRHELRLGDELDVSADAPPLFLYAKQ 411
+L+AN +PAAVSRFR+G +H + + T ++ NVWSSGMWVCTATGST +M AAGGQPM S +QY++REHM+E D E V ++ K+ IRWNS+ G +F+DG H H L LGDE+ V APP+ L+ +
Sbjct: 164 VLIANPSPAAVSRFRMGFLNPIHGDKAPTSTQYGTVTRFGGLAYDVVNSLNVWSSGMWVCTATGSTAAMAAAGGQPMEESSDSLQYLIREHMIEKVDSEEEVTAMNNEMLVAGQKMHIRWNSQKGSIFIDGSHLTHNLELGDEILVDNSAPPVQLFVRD 322
BLAST of mRNA_H-elongata_contig7153.14820.1 vs. uniprot
Match: A0A7S1D377_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D377_CYCTE) HSP 1 Score: 127 bits (320), Expect = 6.480e-32 Identity = 68/153 (44.44%), Postives = 90/153 (58.82%), Query Frame = 1
Query: 19 NPAAVSRFRVGL---VHNEGSTTYERF-----------------NVWSSGMWVCTATGSTGSMNAAGGQPMSPESTDIQYMVREHMVE--DDLEHVREKGQGIIPQESKIEIRWNSKNGCVFVDGEHSRHELRLGDELDVSADAPPLFLYAKQ 411
+PAAVSRFR+G +H + + T ++ NVWSSGMWVCTATGST +M AAGGQPM S +QY++REHM+E D E V ++ K+ IRWNS+ G +F+DG H H L LGDE+ V APP+ L+ +
Sbjct: 4 SPAAVSRFRMGFLNPIHGDKAPTSTQYGTVTRFGGLAYDVVNSLNVWSSGMWVCTATGSTAAMAAAGGQPMEESSDSLQYLIREHMIEKVDSEEEVTAMNNEMLVAGQKMHIRWNSQKGSIFIDGSHLTHNLELGDEILVDNSAPPVQLFVRD 156
BLAST of mRNA_H-elongata_contig7153.14820.1 vs. uniprot
Match: A0A1Z5K600_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K600_FISSO) HSP 1 Score: 132 bits (333), Expect = 1.600e-31 Identity = 74/164 (45.12%), Postives = 96/164 (58.54%), Query Frame = 1
Query: 1 LLLANANPAAVSRFRVGLV--HNEG---STTY--------------ERFNVWSSGMWVCTATGSTGSMNAAGGQPMSPESTDIQYMVREHMVEDDLEHV---------REKGQGIIPQESKIEIRWNSKNGCVFVDGEHSRHELRLGDELDVSADAPPLFLYAK 408
LLLAN +PAAVSRFR+G + EG S TY + NVWSSGMWV T TGST +M+AAGG+PM ES D+QY++REHM+E + G + E K+ +RWNS+ G +F+DG H H L LGDE+ + APPL ++AK
Sbjct: 197 LLLANPSPAAVSRFRMGFMKLRPEGARPSETYGTVTRFGGKPYDVVDSINVWSSGMWVSTGTGSTAAMHAAGGRPMELESRDLQYLIREHMIERQASYTSLDEAPYSPHRVDNGFVRHEEKMHVRWNSQKGRIFIDGSHLTHNLELGDEIMIDNKAPPLKIFAK 360
BLAST of mRNA_H-elongata_contig7153.14820.1 vs. uniprot
Match: A0A6T9YIN5_9STRA (Hypothetical protein n=1 Tax=Asterionellopsis glacialis TaxID=33640 RepID=A0A6T9YIN5_9STRA) HSP 1 Score: 128 bits (321), Expect = 4.890e-31 Identity = 72/173 (41.62%), Postives = 97/173 (56.07%), Query Frame = 1
Query: 1 LLLANANPAAVSRFRVGLVHNEGST--------------------TYERF-----------NVWSSGMWVCTATGSTGSMNAAGGQPMSPESTDIQYMVREHMVEDDLEHVREK-----GQGIIPQESKIEIRWNSKNGCVFVDGEHSRHELRLGDELDVSADAPPLFLYAKQ 411
LL+AN +PAAVSRFR+G + G T RF NVWSSGMWV T+TGST +M AAGG PM +S DIQY++REHM+E +H++++ G I + KI +RWNS++G +F+DG H H + LGDE+ + AP L L+ K
Sbjct: 70 LLIANPSPAAVSRFRMGWLEQVGDAENDNNGNSAETILPKPTPYGTLTRFGGIPYDVTRSLNVWSSGMWVSTSTGSTAAMAAAGGFPMDLDSHDIQYLIREHMIEGGTKHMKKEEVDSLNHGFIKNDEKIHLRWNSQHGRIFIDGSHLTHNVELGDEILIDNTAPSLQLFTKH 242
BLAST of mRNA_H-elongata_contig7153.14820.1 vs. uniprot
Match: K0T1T8_THAOC (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T1T8_THAOC) HSP 1 Score: 124 bits (312), Expect = 1.360e-29 Identity = 59/139 (42.45%), Postives = 90/139 (64.75%), Query Frame = 1
Query: 4 LLANANPAAVSRFRVGLVHNEGSTTYE---RFNVWSSGMWVCTATGSTGSMNAAGGQPMSPESTDIQYMVREHMVED--DLEHVREKGQGIIPQESKIEIRWNSKNGCVFVDGEHSRHELRLGDELDVSADAPPLFLYA 405
L ++ + V+R + G + G Y+ NVWSSGMWVCT+TGST +M AAGGQPM S +QY++REHM+E+ + +++ G++ ++ + +RWNS+ G +F+DG H H L LGDE+ + + APPL LY+
Sbjct: 114 LASSLSEPGVARTKYGTITRFGGQPYDVRNSLNVWSSGMWVCTSTGSTAAMAAAGGQPMDLHSNKLQYLIREHMIENAPNKNEIKDLDNGMLEEDQHLHLRWNSQKGRIFIDGSHLVHNLELGDEILIDSKAPPLALYS 252
BLAST of mRNA_H-elongata_contig7153.14820.1 vs. uniprot
Match: A0A7S3HNA0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HNA0_9STRA) HSP 1 Score: 123 bits (309), Expect = 1.940e-29 Identity = 62/148 (41.89%), Postives = 94/148 (63.51%), Query Frame = 1
Query: 1 LLLANANPAAVSRFRVGLVHNEGSTTYE---------RFNVWSSGMWVCTATGSTGSMNAAGGQPMSPESTDIQYMVREHMVEDDL-EHVREKGQGIIPQESKIEIRWNSKNGCVFVDGEHSRHELRLGDELDVSADAPPLFLYAKQT 414
LL+ PAAVSRFR+ L + ++ FNVWSSGMW+ T +GS+ ++ AGG M S ++QYMVREHM+E+ + H++ G II + +++RWNS+NG V+VDG+H +H L LGDE+ V + AP L ++ +++
Sbjct: 84 LLITQPIPAAVSRFRLALCKGKAKPSFNINDDEDELFSFNVWSSGMWIATPSGSSAAIFNAGGFKMDIRSRNLQYMVREHMIEEGMTHHLKSAGHSIIRPDEMLKLRWNSQNGAVYVDGQHFKHNLELGDEIRVDSHAPYLKIFDQRS 231 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig7153.14820.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig7153.14820.1 >prot_H-elongata_contig7153.14820.1 ID=prot_H-elongata_contig7153.14820.1|Name=mRNA_H-elongata_contig7153.14820.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=142bp LLLANANPAAVSRFRVGLVHNEGSTTYERFNVWSSGMWVCTATGSTGSMNback to top mRNA from alignment at H-elongata_contig7153:2523..4538+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig7153.14820.1 ID=mRNA_H-elongata_contig7153.14820.1|Name=mRNA_H-elongata_contig7153.14820.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2016bp|location=Sequence derived from alignment at H-elongata_contig7153:2523..4538+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig7153:2523..4538+ >mRNA_H-elongata_contig7153.14820.1 ID=mRNA_H-elongata_contig7153.14820.1|Name=mRNA_H-elongata_contig7153.14820.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=852bp|location=Sequence derived from alignment at H-elongata_contig7153:2523..4538+ (Himanthalia elongata Himel1 dioecious)back to top |