mRNA_H-elongata_contig715.14813.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig715.14813.1
Unique NamemRNA_H-elongata_contig715.14813.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
[Close]
BLAST of mRNA_H-elongata_contig715.14813.1 vs. uniprot
Match: D7FU99_ECTSI (Similar to DNA primase large subunit, partial n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FU99_ECTSI)

HSP 1 Score: 109 bits (273), Expect = 1.050e-21
Identity = 52/65 (80.00%), Postives = 59/65 (90.77%), Query Frame = 1 
Query:    1 KTFPLCMRRTLRILRREHHLKYQARIQLVSFLANAGMDVGELLRLWREEFAKGMPPEDYARKRSQ 195
            K FPLCMRRTLRILRREHHLKYQAR+QL+SFL NAGM+V E+L LWREEF KGMP ++YARKR+Q
Sbjct:  413 KHFPLCMRRTLRILRREHHLKYQARLQLISFLRNAGMEVDEILGLWREEFPKGMPADEYARKRNQ 477
[Close]
BLAST of mRNA_H-elongata_contig715.14813.1 vs. uniprot
Match: A0A7S2DU63_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DU63_9STRA)

HSP 1 Score: 107 bits (268), Expect = 1.270e-21
Identity = 57/118 (48.31%), Postives = 80/118 (67.80%), Query Frame = 1 
Query:    7 FPLCMRRTLRILRREHHLKYQARIQLVSFLANAGMDVGELLRLWREEFAKGMPPEDYARKRSQYEYSLRHIYGLEGRRKMFRPQSCARIASGGWGGSGNGGYGHGCPF-YAFRHLPES 357
            FPLC R T + LR++H LKY+AR+QLV FL   G+ V E+L+LWR EF + M P++Y +K+  YEYS+RH+YGLEG+RK + P SC +I     G   N  + +GCP+ +  R + ES
Sbjct:  184 FPLCARVTFKKLRQQHRLKYEARMQLVLFLKGVGLPVDEVLQLWRSEFRRVMTPDEYHKKK--YEYSIRHLYGLEGKRKDYSPYSCQQIIQ--KGPPRNSDHDYGCPWAHGTREMLES 297
[Close]
BLAST of mRNA_H-elongata_contig715.14813.1 vs. uniprot
Match: A0A2L2YIM2_PARTP (DNA primase large subunit n=2 Tax=Parasteatoda tepidariorum TaxID=114398 RepID=A0A2L2YIM2_PARTP)

HSP 1 Score: 91.3 bits (225), Expect = 1.300e-15
Identity = 50/117 (42.74%), Postives = 66/117 (56.41%), Query Frame = 1 
Query:    7 FPLCMRRTLRILRREHHLKYQARIQLVSFLANAGMDVGELLRLWREEFAKGMPPEDYARKRSQYEYSLRHIYGLEGRRKMFRPQSCARIASGGWGGSGNGGYGHGCPFYAFRHLPES 357
            FPLCMR     LR+ HHLKY  R+Q   FL   G+ + + LR WREEF K M  + + +   QY Y++R+ YG EG+R  F P SC +I +    G G     HGCPF   +H  +S
Sbjct:  294 FPLCMRNLHETLRKNHHLKYNGRLQYGLFLKGIGLSLDDALRFWREEFTKVMDSDKFDK---QYTYNIRYNYGKEGKRANFSPYSCVKIITSNAPGPGEH---HGCPF---KHSDQS 401
[Close]
BLAST of mRNA_H-elongata_contig715.14813.1 vs. uniprot
Match: A0A4Y2B4J4_ARAVE (DNA primase large subunit n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2B4J4_ARAVE)

HSP 1 Score: 90.1 bits (222), Expect = 2.980e-15
Identity = 50/118 (42.37%), Postives = 67/118 (56.78%), Query Frame = 1 
Query:    4 TFPLCMRRTLRILRREHHLKYQARIQLVSFLANAGMDVGELLRLWREEFAKGMPPEDYARKRSQYEYSLRHIYGLEGRRKMFRPQSCARIASGGWGGSGNGGYGHGCPFYAFRHLPES 357
            +FPLCMR     LR+ HHLKY  R+Q   FL   G+ + + LR WREEF K M  + + +   QY Y++R+ YG EG+R  F P SC +I +    G G     HGCPF   +H  +S
Sbjct:  292 SFPLCMRNLHDTLRKNHHLKYNGRLQYGLFLKGIGLSLDDALRFWREEFTKVMDVDKFDK---QYTYNIRYNYGKEGKRANFSPYSCMKIITSNAPGPGEH---HGCPF---KHSDQS 400
[Close]
BLAST of mRNA_H-elongata_contig715.14813.1 vs. uniprot
Match: A0A087SZT7_STEMI (DNA primase large subunit (Fragment) n=2 Tax=Stegodyphus TaxID=175340 RepID=A0A087SZT7_STEMI)

HSP 1 Score: 88.6 bits (218), Expect = 7.890e-15
Identity = 50/118 (42.37%), Postives = 67/118 (56.78%), Query Frame = 1 
Query:    4 TFPLCMRRTLRILRREHHLKYQARIQLVSFLANAGMDVGELLRLWREEFAKGMPPEDYARKRSQYEYSLRHIYGLEGRRKMFRPQSCARIASGGWGGSGNGGYGHGCPFYAFRHLPES 357
            +FPLCM+     LRR HHLKY  R+Q   FL   G+ + + LR WR+EF K M  + + +   QY Y++R+ YG EG+R  F P SC +I +    G G     HGCPF   +H  ES
Sbjct:  291 SFPLCMQNLHETLRRNHHLKYNGRLQYGLFLKGIGLTLEDALRFWRQEFTKIMDNDKFDK---QYAYNIRYNYGKEGKRANFSPYSCVKIITTNAPGPGEF---HGCPF---KHSDES 399
[Close]
BLAST of mRNA_H-elongata_contig715.14813.1 vs. uniprot
Match: A0A6V7UAZ4_9BILA (Hypothetical protein n=3 Tax=Meloidogyne enterolobii TaxID=390850 RepID=A0A6V7UAZ4_9BILA)

HSP 1 Score: 82.0 bits (201), Expect = 9.180e-14
Identity = 48/116 (41.38%), Postives = 67/116 (57.76%), Query Frame = 1 
Query:    1 KTFPLCMRRTLRILRREHHLKYQARIQLVSFLANAGMDVGELLRLWREEFAKGMPPEDYARKRSQYEYSLRHIYGLEGRRKMFRPQSCARIASGGWGGSGNGGYGHGCPFYAFRHL 348
            ++FPLCM+     LR+EHHL+Y AR Q   FL   G+ +   L  +R EF K M  + + +   QY Y++RH+YG+EG R   +P SC+ I     G + NG   HGCPF   RH+
Sbjct:   42 ESFPLCMQEIHSHLRKEHHLRYNARNQYGLFLKGIGLSLEGALEFFRSEFTKRMDGDQFTK---QYRYNIRHMYGMEGNRIDKKPLSCSSIIL---GAAPNGIDCHGCPF---RHM 148
[Close]
BLAST of mRNA_H-elongata_contig715.14813.1 vs. uniprot
Match: A0A3B4A007_9GOBI (DNA primase large subunit n=2 Tax=Periophthalmus magnuspinnatus TaxID=409849 RepID=A0A3B4A007_9GOBI)

HSP 1 Score: 85.1 bits (209), Expect = 1.100e-13
Identity = 47/110 (42.73%), Postives = 64/110 (58.18%), Query Frame = 1 
Query:    1 KTFPLCMRRTLRILRREHHLKYQARIQLVSFLANAGMDVGELLRLWREEFAKGMPPEDYARKRSQYEYSLRHIYGLEGRRKMFRPQSCARIASGGWGGSGNGGYGHGCPF 330
            K+FPLCMR+  + LR  HHL++  R+Q   FL   G+ + + L+ WR EF +G    D   K  QY YS+RHI+G EGRR  + P SC ++        G+  Y HGCPF
Sbjct:  277 KSFPLCMRQLHQSLREHHHLRHGGRMQYGLFLKGIGLSLEQALQFWRSEFIRGKVDADKFDK--QYAYSIRHIFGKEGRRADYTPYSCMKVILSNMPSQGD--Y-HGCPF 381
[Close]
BLAST of mRNA_H-elongata_contig715.14813.1 vs. uniprot
Match: UPI000A1C4846 (DNA primase large subunit n=1 Tax=Boleophthalmus pectinirostris TaxID=150288 RepID=UPI000A1C4846)

HSP 1 Score: 84.0 bits (206), Expect = 2.840e-13
Identity = 46/110 (41.82%), Postives = 64/110 (58.18%), Query Frame = 1 
Query:    1 KTFPLCMRRTLRILRREHHLKYQARIQLVSFLANAGMDVGELLRLWREEFAKGMPPEDYARKRSQYEYSLRHIYGLEGRRKMFRPQSCARIASGGWGGSGNGGYGHGCPF 330
            K+FPLCMR+  + LR  HHL++  R+Q   FL   G+ + + L+ WR EF +G    D   K  QY YS+RH++G EGRR  + P SC ++        G+  Y HGCPF
Sbjct:  306 KSFPLCMRQLHQSLREHHHLRHGGRMQYGLFLKGIGLSLEQALQFWRSEFIRGKVDADKFDK--QYAYSIRHMFGKEGRRADYTPYSCMKVILSNMPSQGD--Y-HGCPF 410
[Close]
BLAST of mRNA_H-elongata_contig715.14813.1 vs. uniprot
Match: H2UTA7_TAKRU (DNA primase large subunit n=5 Tax=Takifugu TaxID=31032 RepID=H2UTA7_TAKRU)

HSP 1 Score: 83.6 bits (205), Expect = 3.370e-13
Identity = 45/110 (40.91%), Postives = 63/110 (57.27%), Query Frame = 1 
Query:    1 KTFPLCMRRTLRILRREHHLKYQARIQLVSFLANAGMDVGELLRLWREEFAKGMPPEDYARKRSQYEYSLRHIYGLEGRRKMFRPQSCARIASGGWGGSGNGGYGHGCPF 330
            K+FPLCMR+  + LR  HHL++  R+Q   FL   G+ + + L+ WR EF KG    D   K   Y YS+RH++G EG+R  + P SC ++      G G+    HGCPF
Sbjct:  282 KSFPLCMRQLHQSLRENHHLRHGGRMQYGLFLKGIGLSLEQALQFWRSEFVKGKVDADKFDK--AYAYSVRHMFGREGKRTDYTPYSCMKVILSNAPGQGDH---HGCPF 386
[Close]
BLAST of mRNA_H-elongata_contig715.14813.1 vs. uniprot
Match: A0A3Q3FCL0_9LABR (DNA primase large subunit n=2 Tax=Labrus bergylta TaxID=56723 RepID=A0A3Q3FCL0_9LABR)

HSP 1 Score: 82.4 bits (202), Expect = 7.970e-13
Identity = 44/110 (40.00%), Postives = 63/110 (57.27%), Query Frame = 1 
Query:    1 KTFPLCMRRTLRILRREHHLKYQARIQLVSFLANAGMDVGELLRLWREEFAKGMPPEDYARKRSQYEYSLRHIYGLEGRRKMFRPQSCARIASGGWGGSGNGGYGHGCPF 330
            K+FPLCMR+  + LR  HHL++  R+Q   FL   G+ + + L+ WR EF +G    D   K  QY YS+RH++G EG+R  + P SC ++        G+    HGCPF
Sbjct:  269 KSFPLCMRQLHQSLRENHHLRHGGRMQYGLFLKGIGLSLEQALQFWRSEFIRGKVDADKFDK--QYAYSIRHMFGKEGKRTDYTPYSCMKVILSNAPSQGDH---HGCPF 373
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig715.14813.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FU99_ECTSI1.050e-2180.00Similar to DNA primase large subunit, partial n=2 ... [more]
A0A7S2DU63_9STRA1.270e-2148.31Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A2L2YIM2_PARTP1.300e-1542.74DNA primase large subunit n=2 Tax=Parasteatoda tep... [more]
A0A4Y2B4J4_ARAVE2.980e-1542.37DNA primase large subunit n=1 Tax=Araneus ventrico... [more]
A0A087SZT7_STEMI7.890e-1542.37DNA primase large subunit (Fragment) n=2 Tax=Stego... [more]
A0A6V7UAZ4_9BILA9.180e-1441.38Hypothetical protein n=3 Tax=Meloidogyne enterolob... [more]
A0A3B4A007_9GOBI1.100e-1342.73DNA primase large subunit n=2 Tax=Periophthalmus m... [more]
UPI000A1C48462.840e-1341.82DNA primase large subunit n=1 Tax=Boleophthalmus p... [more]
H2UTA7_TAKRU3.370e-1340.91DNA primase large subunit n=5 Tax=Takifugu TaxID=3... [more]
A0A3Q3FCL0_9LABR7.970e-1340.00DNA primase large subunit n=2 Tax=Labrus bergylta ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig715contigH-elongata_contig715:6668..9112 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score98.6
Seed ortholog evalue4.3e-18
Seed eggNOG ortholog2880.D7FU99
KEGG rclassRC02795
KEGG koko:K02685
KEGG ReactionR00375,R00376,R00377,R00378
KEGG Pathwayko00230,ko00240,ko01100,ko03030,map00230,map00240,map01100,map03030
KEGG ModuleM00261
EggNOG free text desc.DNA primase activity
EggNOG OGsCOG2219@1,KOG2267@2759
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03032
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionDNA primase large subunit, eukaryotic/archaeal
Ec32 orthologEc-18_001420.2
Exons3
Model size1978
Cds size741
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig715.14813.1prot_H-elongata_contig715.14813.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig715 6686..7893 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931115.8776238-UTR-H-elongata_contig715:6667..66851622931115.8776238-UTR-H-elongata_contig715:6667..6685Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig715 6668..6685 +
1691679704.7090173-UTR-H-elongata_contig715:6667..66851691679704.7090173-UTR-H-elongata_contig715:6667..6685Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig715 6668..6685 +
1622931115.9212184-UTR-H-elongata_contig715:7893..91121622931115.9212184-UTR-H-elongata_contig715:7893..9112Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig715 7894..9112 +
1691679704.7598734-UTR-H-elongata_contig715:7893..91121691679704.7598734-UTR-H-elongata_contig715:7893..9112Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig715 7894..9112 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931115.889148-CDS-H-elongata_contig715:6685..67811622931115.889148-CDS-H-elongata_contig715:6685..6781Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig715 6686..6781 +
1691679704.727227-CDS-H-elongata_contig715:6685..67811691679704.727227-CDS-H-elongata_contig715:6685..6781Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig715 6686..6781 +
1622931115.8999338-CDS-H-elongata_contig715:6992..70721622931115.8999338-CDS-H-elongata_contig715:6992..7072Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig715 6993..7072 +
1691679704.7372527-CDS-H-elongata_contig715:6992..70721691679704.7372527-CDS-H-elongata_contig715:6992..7072Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig715 6993..7072 +
1622931115.9108255-CDS-H-elongata_contig715:7328..78931622931115.9108255-CDS-H-elongata_contig715:7328..7893Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig715 7329..7893 +
1691679704.749767-CDS-H-elongata_contig715:7328..78931691679704.749767-CDS-H-elongata_contig715:7328..7893Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig715 7329..7893 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig715.14813.1

>prot_H-elongata_contig715.14813.1 ID=prot_H-elongata_contig715.14813.1|Name=mRNA_H-elongata_contig715.14813.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=247bp
MRRTLRILRREHHLKYQARIQLVSFLANAGMDVGELLRLWREEFAKGMPP
EDYARKRSQYEYSLRHIYGLEGRRKMFRPQSCARIASGGWGGSGNGGYGH
GCPFYAFRHLPESRNGGCGLGGGSDASMLSGKRISDGRNGSITREMLTEQ
NLCVADIEDIVSPLESVPGPTKTGCCGGIGSAVSACSRHFSATHRWAAGG
FTWDGGSGELEASPNGWFAASNHSQPDAFMTQQKTRFGVAGDGAVS*
back to top

mRNA from alignment at H-elongata_contig715:6668..9112+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig715.14813.1 ID=mRNA_H-elongata_contig715.14813.1|Name=mRNA_H-elongata_contig715.14813.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2445bp|location=Sequence derived from alignment at H-elongata_contig715:6668..9112+ (Himanthalia elongata Himel1 dioecious)
AAAACTTTCCCGCTCTGCATGCGACGAACGCTACGTATCCTGCGCCGCGA
GCACCACCTCAAGTATCAAGCCAGGATACAGCTCGTCAGCTTTCTGGCGA
ATGCTGGGATGGACGTGAGACCACGGCAGCTTGACTTGTAATTTTGTTTG
CTTCATGGTGTTATCTTGCTCCCATTTCTTTGCACAGGCTAGAGTAATTT
CGACTTAGTATCCACCCCCCAAAAATACCAGGCGCCGTGTTTCAGTAAGG
TTTGTATGGAGATATTAATTTTCGTCGTTTTCGAGAACGACCCAACGGTG
TTAGTGCCGCTTTACGCCTTGGCAGGTGGGCGAGTTGCTGAGATTGTGGC
GCGAAGAGTTCGCGAAAGGCATGCCGCCGGAGGACTACGCTCGGAAGCGT
AGCCAGTTACGTACATTCAGGCAACTAGCGTATTGATAATTTGGAAGGAA
TCTGTGTTCTTGACCACCTTTTGCGTATTAATCGTAACACCACATACCTG
TAAAACGACATACATTATCGCTTCTGTAGTCCAGTTTGGATGCAAGATGA
GAACACCCGTCCTATCGTGTGATTCGTCGAAGATATTTTTGTTTTAAGAA
TCTCTTCCGGCATCATAACCCACAAGAAATCGTGTTTGAATTTCATTCCT
TGCACCGTCAGATATGAATACAGCCTTAGACATATCTACGGCCTCGAGGG
GAGACGAAAGATGTTCAGGCCACAGTCATGCGCGCGCATCGCCTCTGGCG
GTTGGGGAGGCTCCGGTAATGGCGGGTACGGTCATGGATGCCCCTTCTAC
GCTTTTCGACACCTTCCCGAATCTCGAAACGGTGGTTGTGGTTTGGGAGG
AGGTTCTGATGCCTCCATGCTCTCGGGCAAACGCATCAGCGATGGCCGGA
ACGGTAGCATTACTCGTGAAATGCTCACTGAGCAAAACTTGTGCGTTGCC
GATATCGAAGATATCGTGAGCCCGCTCGAAAGTGTGCCTGGGCCGACAAA
AACTGGATGCTGCGGGGGGATAGGCAGTGCCGTGAGCGCGTGCTCAAGAC
ATTTTTCGGCAACGCATCGCTGGGCAGCTGGCGGCTTTACGTGGGACGGT
GGAAGTGGCGAGCTGGAGGCCAGCCCCAATGGCTGGTTCGCAGCCTCGAA
CCATTCTCAGCCGGATGCGTTTATGACACAACAAAAAACTAGGTTTGGTG
TGGCTGGGGACGGCGCGGTTAGCTAACGACCTGATCGTTTGTCAGCGGCA
GTGTTTTTCTGGCCGAATAATGCTGTAATGTTCTAAATAATGTTCAGAGC
TGTCATTCTTTAATGCAATGGATGCGCGGATGTCATGGGATGGCCATGAA
CAATTGCAGCGCTTGATATACAGAGCAGCAGGAGAACGCATACATCGTGA
AAATAGTTGATCAATGCCTACGCGGGCGTTGTGATTAGGAAGAATTCGGA
AGCCCGCCAATCTGTTGATCACGAAGGTTTGACCGCTCCCCTAGGGTACC
TAAAATTCCACACGTTGTCGTAGTTGTGGGAAATCTGGAATCGGTTCTCC
CCTCCGCAAATTGCACAAAGCCAAAAATACAGGCCCACAATTTAATTTTT
AAACTGTCATGTGTGAACTCTTTATATCATTATTGGGCCCTCTTACTGGC
TTGTCGAATAAAATTTCGTGGTAACCACTTAAATAGTAAGAAGGCTTCCT
TAGGTTTTAAACTGGATTCGGACTCATCTGGCCGTGCAACGCAAAACTCT
ATCTGTCGGGACAGAAGAATTTTGCCGTCTTTATTTACTGCTGCAAAAGT
ACGACAGCTCTAGCCCGTGTACGTTCATGAAGCGTTTGATCACGAAGTGC
AGCCAACCTGAGGCGAGGGACCCTGTGAAGATGGCAAAAGGAACCAAGCC
TCACTGATGGAACGCTAGAGACTTGAGTTCGAGCTAAGTTTTCCGATGGC
TGCGAGATGTTATGTTTGGTTTTCTTCGACATTTTCATATGTGTGTATAT
TTGTGTGTGTAGGTGTTTGTGTTGTCATCCCATTTAGCCTGCGCGACAGA
CTTGTGGACGCACCAGCCCCCGGGTCAAACAGGAGGAAGGTCGCACATGA
TTTCTCCTCCTTCCTTCTGCGATGCTCGCCTTAATTGTTTATCGCGGCAA
GGATTCAACCGTCCCTTTCCCTCGTCGACCTTGAATTCAAATTTTGTTTA
CCCAAGAAATAGTCGTGTTCTCCACTTCTTGGGCATGGTGCGAGAAACAA
TTCCACTTCGTGTGACTCCTGTTATAAGGACTGGCTTGAAGTCCCTTCGC
TCTAGGTTATGACCTAGAAGTAGAAGCCGTTTCGTAGAGTCCATCTCTAT
TCTGGATTACTGTATACAGTCTTTTTAGGAAACGTGGACCCACTTGGATT
CAGTTTTGTGTGTGTTCTTATTCTACTCGTGTTTTGTGCAGCAAG
back to top

Coding sequence (CDS) from alignment at H-elongata_contig715:6668..9112+

>mRNA_H-elongata_contig715.14813.1 ID=mRNA_H-elongata_contig715.14813.1|Name=mRNA_H-elongata_contig715.14813.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1482bp|location=Sequence derived from alignment at H-elongata_contig715:6668..9112+ (Himanthalia elongata Himel1 dioecious)
ATGCGACGAACGCTACGTATCCTGCGCCGCGAGCACCACCTCAAGTATCA
AGCCAGGATACAGCTCGTCAGCTTTCTGGCGAATGCTGGGATGGACATGC
GACGAACGCTACGTATCCTGCGCCGCGAGCACCACCTCAAGTATCAAGCC
AGGATACAGCTCGTCAGCTTTCTGGCGAATGCTGGGATGGACGTGGGCGA
GTTGCTGAGATTGTGGCGCGAAGAGTTCGCGAAAGGCATGCCGCCGGAGG
ACTACGCTCGGAAGCGTAGCCAGTGGGCGAGTTGCTGAGATTGTGGCGCG
AAGAGTTCGCGAAAGGCATGCCGCCGGAGGACTACGCTCGGAAGCGTAGC
CAATATGAATACAGCCTTAGACATATCTACGGCCTCGAGGGGAGACGAAA
GATGTTCAGGCCACAGTCATGCGCGCGCATCGCCTCTGGCGGTTGGGGAG
GCTCCGGTAATGGCGGGTACGGTCATGGATGCCCCTTCTACGCTTTTCGA
CACCTTCCCGAATCTCGAAACGGTGGTTGTGGTTTGGGAGGAGGTTCTGA
TGCCTCCATGCTCTCGGGCAAACGCATCAGCGATGGCCGGAACGGTAGCA
TTACTCGTGAAATGCTCACTGAGCAAAACTTGTGCGTTGCCGATATCGAA
GATATCGTGAGCCCGCTCGAAAGTGTGCCTGGGCCGACAAAAACTGGATG
CTGCGGGGGGATAGGCAGTGCCGTGAGCGCGTGCTCAAGACATTTTTCGG
CAACGCATCGCTGGGCAGCTGGCGGCTTTACGTGGGACGGTGGAAGTGGC
GAGCTGGAGGCCAGCCCCAATGGCTGGTTCGCAGCCTCGAACCATTCTCA
GCCGGATGCGTTTATGACACAACAAAAAACTAGGTTTGGTGTGGCTGGGG
ACGGCGCGGTTAGCTAAATATGAATACAGCCTTAGACATATCTACGGCCT
CGAGGGGAGACGAAAGATGTTCAGGCCACAGTCATGCGCGCGCATCGCCT
CTGGCGGTTGGGGAGGCTCCGGTAATGGCGGGTACGGTCATGGATGCCCC
TTCTACGCTTTTCGACACCTTCCCGAATCTCGAAACGGTGGTTGTGGTTT
GGGAGGAGGTTCTGATGCCTCCATGCTCTCGGGCAAACGCATCAGCGATG
GCCGGAACGGTAGCATTACTCGTGAAATGCTCACTGAGCAAAACTTGTGC
GTTGCCGATATCGAAGATATCGTGAGCCCGCTCGAAAGTGTGCCTGGGCC
GACAAAAACTGGATGCTGCGGGGGGATAGGCAGTGCCGTGAGCGCGTGCT
CAAGACATTTTTCGGCAACGCATCGCTGGGCAGCTGGCGGCTTTACGTGG
GACGGTGGAAGTGGCGAGCTGGAGGCCAGCCCCAATGGCTGGTTCGCAGC
CTCGAACCATTCTCAGCCGGATGCGTTTATGACACAACAAAAAACTAGGT
TTGGTGTGGCTGGGGACGGCGCGGTTAGCTAA
back to top